BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027894
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/217 (94%), Positives = 211/217 (97%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MASYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDAKAFAEREN FFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG DPAALPKGQTINVG KDDVSAVKKVGCC+A
Sbjct: 181 KALDIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 209/216 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELR HTDSNIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IM VGNKADLRHL AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL+QIY VVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KALDIG DPAALPKGQTINVG KDDVSAVKKVGCC+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCS 216
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/217 (93%), Positives = 209/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDS+IV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL AVS +DAKAFAERENTFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG DPAALPKGQTINVG KDDVSAVKK GCC++
Sbjct: 181 KALDIGDDPAALPKGQTINVGTKDDVSAVKKAGCCSS 217
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 209/216 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IM VGNKADLRHL AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL+QIY VVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KALDIG DPAALPKGQTINVG KDDVSAVKKVGCC+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCS 216
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/217 (93%), Positives = 211/217 (97%), Gaps = 2/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL++G DP ALPKGQTINV KDDVSAVKKVGCC+A
Sbjct: 181 KALEVGDDPGALPKGQTINV--KDDVSAVKKVGCCSA 215
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/217 (91%), Positives = 210/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTEDA+ FAERENTFFMETSALES+NVENAFTEVLTQIYHVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/217 (92%), Positives = 210/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYR D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVLTQIY VV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG KDDVSA+KKVGCC++
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/217 (93%), Positives = 209/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 499 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 558
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDS+IV
Sbjct: 559 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 618
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL AVS +DAKAFAERENTFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 619 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 678
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG DPAALPKGQTINVG KDDVSAVKK GCC++
Sbjct: 679 KALDIGDDPAALPKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/217 (92%), Positives = 210/217 (96%), Gaps = 1/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV+TEDAKAFAERE+TFFMETSALES+NVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD+G DPAALPKGQTINV GKDDVSAVKKVGCC+A
Sbjct: 181 KALDVGDDPAALPKGQTINV-GKDDVSAVKKVGCCSA 216
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/216 (92%), Positives = 210/216 (97%), Gaps = 2/216 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M+AYRADEDYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIRV+DK
Sbjct: 1 MSAYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IM VGNKADLRHL AVSTEDAKAFAERENT+FMETSALES+NVENAFTEVLTQIYHVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KALDIG DPAALPKG+TINV KDDVSAVKKVGCC+
Sbjct: 181 KALDIGDDPAALPKGETINV--KDDVSAVKKVGCCS 214
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/217 (90%), Positives = 209/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVST+DAKAFAERENTFFMETSALES+NV+N+FTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K L+IG DPAALPKGQTINVG +DDVSAVKKVGCC+A
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKVGCCSA 217
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/217 (91%), Positives = 209/217 (96%), Gaps = 1/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HT+SNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV+TEDA AFAERE TFFMETSALES+NVENAFTEVLTQIYHVVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD+G DPAALPKGQTINV GKDDVSAVKKVGCC+A
Sbjct: 181 KALDVGDDPAALPKGQTINV-GKDDVSAVKKVGCCSA 216
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/215 (90%), Positives = 208/215 (96%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVSTEDAKAFAE+ENTFFMETSALESMNVENAFTEVLTQIYHVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA PKGQTINVGGKDDVSAVKK CC++
Sbjct: 182 LDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/217 (90%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVST+DAKAFAERENTFFMETSALES+NV+NAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K L+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 209/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRADEDYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV++K
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELR HTD+NIV
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTE+A AFAERE TFFMETSALESMNVENAFTEVLTQIYHVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKDGCCSA 217
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTED+ AFAERENTFFMETSALESMNVENAFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DP ALPKGQTI+VG +DDVSAVKK GCC+A
Sbjct: 181 KALEIGDDPTALPKGQTIDVGSRDDVSAVKKSGCCSA 217
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/217 (90%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE+WLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVST+DAKAFAERENTFFMETSALES+NV+NAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K L+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/217 (89%), Positives = 207/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL A++ EDA AFA+R+NTFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG DPAALP+GQTINVG +DDVSAVKK GCC++
Sbjct: 181 KALDIGDDPAALPRGQTINVGSRDDVSAVKKAGCCSS 217
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/217 (90%), Positives = 207/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV+T DAKAFAERENTFFMETSALES+NV+NAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K L+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYD+LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V++K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HT++NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALE++NVENAFTEVL+QIY V S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG DPA LPKGQ+INVG KDDVS VKKVGCC++
Sbjct: 181 KALDIGDDPATLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/217 (91%), Positives = 208/217 (95%), Gaps = 1/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV+TEDA AFAERENTFFMETSALES+NVENAFTEVLTQI+ VVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD+G DPAALPKGQTI V GKDDVSAVKKVGCC+A
Sbjct: 181 KALDVGDDPAALPKGQTITV-GKDDVSAVKKVGCCSA 216
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/215 (90%), Positives = 208/215 (96%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAKAFAERE+TFFMETSALE+MNVENAFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/217 (89%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDY +KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTED+ AFAERENTFFMETSALES+NVENAFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG +DDVSAVKK GCC++
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSS 217
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/215 (90%), Positives = 207/215 (96%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 109 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 168
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 169 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 228
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAK FAERE+TFFMETSALESMNVE+AFTEVLTQIY VVS+KA
Sbjct: 229 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 288
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 289 LDIGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 323
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/215 (90%), Positives = 208/215 (96%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAKAFAERE+TFFMETSALE+MNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/217 (90%), Positives = 207/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVST+DAK FAERENTFFMETSALES+NV+NAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K L+IG DPAALPKGQTINVG KDDVSAVKKVGC +A
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSKDDVSAVKKVGCYSA 217
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/217 (88%), Positives = 209/217 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTED+ +FAERE+TFFMETSALES+NVE+AFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKGGCCSA 217
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/217 (88%), Positives = 208/217 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTEDA +F+ERENT+FMETSALES+NVE+AFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+IG DPAALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKAGCCSA 217
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/215 (90%), Positives = 207/215 (96%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAK FAERE+TFFMETSALESMNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 216
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 205/217 (94%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV+TEDAK FAERE+TFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD+G D LPKGQTINVG +DDVSAVKK GCC++
Sbjct: 181 KALDVGDDSTYLPKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/215 (90%), Positives = 206/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAK FAERE TFFMETSALESMNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/215 (89%), Positives = 206/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAKAFAERE TFFMETSALESMNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVG KDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/215 (88%), Positives = 205/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++ELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV TEDAKAFAEREN FFMETSALE+MNVE AFTEVLTQIYHVVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTI+VGGKDDVSAVKK CC++
Sbjct: 182 LDIGDDPAAPPRGQTISVGGKDDVSAVKKSACCSS 216
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/215 (89%), Positives = 206/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS EDAKAFAERE TFFMETSALE+MNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVG KDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/217 (88%), Positives = 206/217 (94%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYD+LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V++K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HT++NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALE++NVENAFTEVL+QIY V S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG D LPKGQ+INVG KDDVS VKKVGCC++
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/215 (88%), Positives = 205/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV TEDAKAFAEREN FFMETSALE+MNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA PKGQTINVGGKDDVSAVKK CC++
Sbjct: 182 LDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/217 (88%), Positives = 203/217 (93%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDA+AFAERE T+FMETSALES NVEN+FTEVLTQ Y VVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K LDIG DP LPKGQTI++G KDDVSAVKK GCC++
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/213 (90%), Positives = 205/213 (96%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK+VKA
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKA 87
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIMLV
Sbjct: 88 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLV 147
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNKADLRHL AVS EDAK FAERE+TFFMETSALESMNVE+AFTEVLTQIY VVS+KALD
Sbjct: 148 GNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALD 207
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
IG DPAA P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 208 IGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 240
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/216 (88%), Positives = 207/216 (95%), Gaps = 1/216 (0%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+K+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRV+DKI
Sbjct: 3 GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELR HTD NIVI
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALES+NVENAFTEVLT+IY VV RK
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182
Query: 182 ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
AL++G DPAALPKGQTINV GKDDVSAVKKVGCC++
Sbjct: 183 ALEVGDDPAALPKGQTINV-GKDDVSAVKKVGCCSS 217
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/215 (87%), Positives = 203/215 (94%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VEDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++ELR HTD+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV TEDAKAFAER+N FFMETSALE+MNVE+AFTEVL QIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+G TINVGGKDDVSAVKK CC++
Sbjct: 182 LDIGDDPAAPPRGHTINVGGKDDVSAVKKSACCSS 216
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/215 (87%), Positives = 204/215 (94%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIRV+DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV EDAKAFAERE T+F ETSALE+MNVE+AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA P+GQTINVG KDDVSAVKK GCC++
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/215 (87%), Positives = 205/215 (95%), Gaps = 1/215 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK++
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AVS ED KAFAERENT+FMETSALES NVENAFTEVL+QIY +VS+KA
Sbjct: 122 LVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
LD+G DPAA+P KGQTI+VG KDDV+A+KKVGCC+
Sbjct: 182 LDVGEDPAAVPSKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/215 (86%), Positives = 205/215 (95%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA++DYDYL+KVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSI V+DK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWL+EL+ HTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV +EDAKAFAERENTFFMETSALE+MNVE+AFTEVL+QIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LDIG DPAA PKG+TI+VG KDDVSAVKK CC++
Sbjct: 182 LDIGDDPAAPPKGKTISVGSKDDVSAVKKSACCSS 216
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 200/207 (96%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK+VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV+MLVGNKADL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
RHL AVSTED+ AFAERENTFFMETSALES+NVE+AFTEVLTQIY VVS+KAL+IG DPA
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPA 180
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCCNA 217
ALPKGQTINVG +DDVSAVKK GCC+A
Sbjct: 181 ALPKGQTINVGSRDDVSAVKKGGCCSA 207
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 202/218 (92%), Gaps = 1/218 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQ+WDTAGQERYRAITSAYYRGAVGALLVYDV+RHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VVKAQVWDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENT-FFMETSALESMNVENAFTEVLTQIYHVVS 179
+MLVGNKADLRHL AVSTED+ F E T FFMETSALES+NVENAFTEVLTQIY VVS
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVS 180
Query: 180 RKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+KAL+IG DP ALPKGQTINVG +DDVS VKK GCC++
Sbjct: 181 KKALEIGDDPTALPKGQTINVGSRDDVSPVKKSGCCSS 218
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/218 (84%), Positives = 205/218 (94%), Gaps = 1/218 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRA++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ +DK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL A+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ G DP ALPKGQ INVGG+DD+SAVKK GCC+A
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 205/217 (94%), Gaps = 1/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV++K
Sbjct: 1 MGAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV+RWLKELR HTDS+IV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADL HL AVSTEDAKA+AE+E+TFF+ETSALES NVENAFTEVLTQIYHVVSR
Sbjct: 121 IMLVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ G + A +PKGQTINV GKDDVSA+K GCC+A
Sbjct: 181 KALETGDEAATVPKGQTINV-GKDDVSAIKIGGCCSA 216
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 204/218 (93%), Gaps = 1/218 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRA++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ +DK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL A+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ G DP ALPKGQ INVG +DD+SAVKK GCC+A
Sbjct: 181 KALEAGDDPTTALPKGQMINVGSRDDISAVKKPGCCSA 218
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 201/216 (93%), Gaps = 1/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYR+DEDYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K+V
Sbjct: 2 AYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TR VT+ENVERWLKEL+ HTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL AVSTED +AF+ERE +FMETSALES NVENAF ++LTQIY VVS+KA
Sbjct: 122 LVGNKSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
LD+G DP+A P KGQTINVGGKDDV+A KKVGCC+A
Sbjct: 182 LDVGEDPSAAPAKGQTINVGGKDDVTATKKVGCCSA 217
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 198/216 (91%), Gaps = 1/216 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M Y+A++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+V+DK
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADL HL A+STE+ K FAERENTFFMETSALE++NVENAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
KALD G DP ALPKGQ INVG +DDVSAVKK GCC
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCC 216
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 200/217 (92%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+K+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ V++K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELR HTD+N+V
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV TE+A++F+EREN FFMETSAL++ NVE AFT VLTQIY V+SR
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD GDP +LPKGQTI++G KDDV+AVK GCC+
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCSG 217
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 200/216 (92%), Gaps = 1/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYR+D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+ HTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+ LRHL AVS +D ++F+E+E FFMETSALES NVENAF ++LTQIY VVS+KA
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
LD+G DP+A+P KGQTI+VG KDDV+A KKVGCC+A
Sbjct: 182 LDVGEDPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/217 (83%), Positives = 197/217 (90%), Gaps = 2/217 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR-SIRVED 59
M Y+A++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATR I+V+D
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDD 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+N
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VIMLVGNKADL HL A+STE+ K FAERENTFFMETSALE++NVENAFTEVLTQIY VVS
Sbjct: 121 VIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVS 180
Query: 180 RKALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
+KALD G DP ALPKGQ INVG +DDVSAVKK GCC
Sbjct: 181 KKALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCC 217
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 199/216 (92%), Gaps = 1/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYR+D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+ HTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+ LRHL AVS +D ++F+E+E FFMETSALES NVENAF ++ TQIY VVS+KA
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
LD+G DP+A+P KGQTI+VG KDDV+A KKVGCC+A
Sbjct: 182 LDVGEDPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/212 (83%), Positives = 196/212 (92%), Gaps = 3/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DEDYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R+ DK VKAQ
Sbjct: 4 SDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTR VTFENV+RWLKELR HTD+NIVIMLVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NKADLRHL AV TE+A AFAERENT+FMETSALES+NV+NAF EVL++IY+VVSRK L+
Sbjct: 124 NKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEK 183
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G DP ALP+GQTIN+G DVSAVKK GCC+A
Sbjct: 184 GNDPGALPQGQTINLG---DVSAVKKPGCCSA 212
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 199/218 (91%), Gaps = 7/218 (3%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRA++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ +DK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQE SAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 114
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL A+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIY VVS+
Sbjct: 115 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 174
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ G DP ALPKGQ INVGG+DD+SAVKK GCC+A
Sbjct: 175 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 212
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 199/216 (92%), Gaps = 2/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYR+++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKEL+ HTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL VSTED +A++E+E +FMETSALES+NVEN+F ++LTQIY VVS+KA
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
LD+G DP+A+P KGQTINV KDDV+A KKVGCC A
Sbjct: 182 LDVGEDPSAVPGKGQTINV-SKDDVTATKKVGCCPA 216
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/215 (81%), Positives = 195/215 (90%), Gaps = 3/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K++
Sbjct: 2 AYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKELR HT+ NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL AVSTEDA+ FAERE +F+ETSALES NVENAF +VLTQIY +VS+KA
Sbjct: 122 LVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKA 181
Query: 183 LDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
LD+ D AA P+GQTINV KDDV+A KKVGCC+
Sbjct: 182 LDVSEDNAAAPPQGQTINV--KDDVTATKKVGCCS 214
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 173/214 (80%), Positives = 197/214 (92%), Gaps = 2/214 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYR+++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENVERWLKEL+ HTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL VSTED +A++E+E +FMETSALES+NVEN+F ++LTQIY VVS+KA
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
LD+G DP+A+P KGQTINV KDDV+A KKVGCC
Sbjct: 182 LDVGEDPSAVPGKGQTINV-SKDDVTATKKVGCC 214
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 194/217 (89%), Gaps = 5/217 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V +K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE E+ +FMETSALES NVENAF+EVLTQIYHVVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ G D +P KG+ I+V DVSAVKK GCC+
Sbjct: 181 KAMEAGQDSGNVPSKGEKIDV----DVSAVKKTGCCS 213
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 194/217 (89%), Gaps = 5/217 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V +K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE E+ +FMETSALES NVENAF+EVLTQIYHVVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ G D +P KG+ I+V DVSAVKK GCC+
Sbjct: 181 KAMEAGEDSGNVPSKGEKIDV----DVSAVKKTGCCS 213
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 194/211 (91%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
ADE+YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R+ DK+VKAQ
Sbjct: 4 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD TRHVTFENVERWLKELR HTD+ +VIMLVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DLRHLCAVSTE+A AFAE+EN +FMETSALESMNV++AF EVLTQIY+VVS++AL+
Sbjct: 124 NKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALEK 183
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
A++PKG+TIN+ G+DDVS VKK CC+
Sbjct: 184 ENGSASVPKGETINI-GRDDVSEVKKSTCCS 213
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVLTQIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A++ G D A+ P KG+ IN+ KDDVSAVKK GCC++
Sbjct: 183 AVEAGEDAASGPGKGEKINI--KDDVSAVKKGGCCSS 217
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVEN+F EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180
Query: 181 KALDIGGDPAAL---PKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G AA PKG+ I+V DVSAVKK GCC++
Sbjct: 181 KAMEAGDGTAAASVPPKGEKIDVS--KDVSAVKKAGCCSS 218
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 194/217 (89%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ V+DK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVE WLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE+E+ +FMETSALE+ NVENAF EVLTQI+H+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ + A +P KG I++G DVSAVKK GCC+
Sbjct: 181 KAMEAASESANVPSKGDKIDIG--KDVSAVKKGGCCS 215
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 194/217 (89%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVLTQIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+++ G D + P KG+ IN+ KDDVSAVKK GCC+
Sbjct: 183 SVEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCSG 217
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 169/210 (80%), Positives = 192/210 (91%), Gaps = 1/210 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R+ DK+VKAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD TRHVTFENVERWLKELR HTD+ +VIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
KADL+HL AVSTE+A FAE+EN +FMETSALES+NV+NAF EVLTQIY+VVS+K L+
Sbjct: 125 KADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEKE 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
A++PKG+TIN+ GKDDVS VKK GCC+
Sbjct: 185 NGSASVPKGETINI-GKDDVSDVKKSGCCS 213
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVL QIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A++ G D A+ P +G+ IN+ KDDVSAVKK GCC++
Sbjct: 183 AVEAGEDAASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 171/219 (78%), Positives = 197/219 (89%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ NV+NAF EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ G D A A+P KG+ I+VG DVSA+K+VGCC+
Sbjct: 181 KAMEAGDDGAASAVPSKGEKIDVG--KDVSAMKRVGCCS 217
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
+ YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 SGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFEN ERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVE+AF EVLTQIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A++ G D A+ P KG+ IN+ KDDVSAVKK GCC++
Sbjct: 183 AVEAGEDSASGPGKGEKINM--KDDVSAVKKGGCCSS 217
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 193/216 (89%), Gaps = 1/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AYRA+E+YDYL+KVVLIGDSGVGKSNLLSRF R+EFSL+++STIGVEFAT++++V+ K+V
Sbjct: 4 AYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH+TFEN ERWL ELR HTD+NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVM 123
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNKADLRHL AV E+A+AFAER TF METSALES NVE AFTEVL +IY VVS+KA
Sbjct: 124 LVGNKADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKA 183
Query: 183 LDIGGDPAALPKGQTINVG-GKDDVSAVKKVGCCNA 217
LDIG DPAA P+G+TINVG KD+VS V GCC+A
Sbjct: 184 LDIGDDPAAPPRGKTINVGAAKDEVSPVNTGGCCSA 219
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 193/217 (88%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YR ++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVLTQIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+++ G D + P KG+ IN+ KDDVSAVKK GCC+
Sbjct: 183 SVEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCSG 217
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 194/217 (89%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVL QIY +V ++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A++ G D A+ P +G+ IN+ KDDVSAVKK GCC++
Sbjct: 183 AVEAGEDAASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ NV+NAF EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G G +A+P KG+ I+V DVSA+K+VGCC++
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDV--SKDVSAMKRVGCCSS 218
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 196/215 (91%), Gaps = 4/215 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
ADEDYDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRS+ V+ K+VKAQ
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT++ +V+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD- 184
NKADLRHL AVSTE+A FAE+E+ +FMETSALES+NV+NAF EVLTQIY+VVSRK L+
Sbjct: 123 NKADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLET 182
Query: 185 IGGDPA--ALPKGQTINVGGK-DDVSAVKKVGCCN 216
+ DP+ ALPKG+TI +G K DDVSAVKK GCC+
Sbjct: 183 VDDDPSTKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 197/219 (89%), Gaps = 4/219 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTED K++AE+E+ +FMETSALE+ NVENAF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALD--IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K ++ G+ + KG+ I++ K+DVSA+K+VGCC++
Sbjct: 181 KTVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+KVVLIGDSGVGKSNLLS FT+NEFSLESKSTIGVEFATRS+ V+DK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVE WLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE+E+ +FMETSA E+ NVENAF EVLTQI+H+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ + A +P KG I++G DVSAVKK GCC+
Sbjct: 181 KAMEAASESANVPSKGDKIDIG--KDVSAVKKGGCCS 215
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRADE+YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT++ +VE K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELRGHTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK DLRHL AV TE+AKAFAERE+ +FMETSAL++ NVENAFTEVLTQI+ +VS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+++D GG+ A LP KG+TINV K+D S +K++GCC+
Sbjct: 181 RSVDGGGESADLPGKGETINV--KEDGSVLKRMGCCS 215
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/220 (77%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 64 MAGYRAEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 123
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 124 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 183
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAERE FFMETSALE+ NVENAF EVLTQIY++VS+
Sbjct: 184 VMLVGNKSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSK 243
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ + +A+P +G+ I+VG DVSAVK+ GCC++
Sbjct: 244 KALETSEQANGSAVPSQGEKIDVG--KDVSAVKRGGCCSS 281
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ NV+NAF EVL QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A+P KG+ I+V DVSA+K+VGCC++
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDV--NKDVSAMKRVGCCSS 218
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/215 (77%), Positives = 190/215 (88%), Gaps = 1/215 (0%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
YRA+E+YDYL+KVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT+++RV+D++VK
Sbjct: 10 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVK 69
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +TFEN ERWLKELR HTD+NIV+ML
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVML 129
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNKADLRHL AV EDA+AFAE TF METSALE+ NVE AFTEVL QIY VVSR AL
Sbjct: 130 VGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL 189
Query: 184 DIGGDPAALPKGQTINVGGKDD-VSAVKKVGCCNA 217
DIG DPAA P+G+TI+V KDD V+ V GCC++
Sbjct: 190 DIGDDPAAPPRGRTIDVSAKDDAVTPVNSSGCCSS 224
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ NV++AF EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A+P KG+ I+V DVSA+K+VGCC++
Sbjct: 181 KAMETGDEAAASAVPSKGEKIDVS--KDVSAMKRVGCCSS 218
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 194/215 (90%), Gaps = 4/215 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
ADEDYDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRS+ V+ K+VKAQ
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT++ +V+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD- 184
NKADLRHL AVSTE+A +AE+EN +FMETSALES+NV NAF EVLTQIY+VVSRK L+
Sbjct: 123 NKADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLET 182
Query: 185 IGGDP--AALPKGQTINVGGK-DDVSAVKKVGCCN 216
+ DP ALPKG+TI +G K DDVSAVKK GCC+
Sbjct: 183 MDDDPNSKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 197/219 (89%), Gaps = 4/219 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNKADLRHL AVSTED K++AE+E+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALD--IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G+ + KG+ I++ K+DVSA+K+VGCC++
Sbjct: 181 KAVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVE AF EVLTQIY+VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ D A A+P KG+ I+VG DVSA+KK GCC++
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVG--KDVSAMKKGGCCSS 218
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M+AYRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ ++ K
Sbjct: 1 MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALE+ NV+NAF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
Query: 181 KALDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ D AA + KG+ I++ DVS VKK GCC++
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDIS--KDVSEVKKGGCCSS 218
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/219 (74%), Positives = 197/219 (89%), Gaps = 4/219 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKELR HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K++AE+E+ +FMETSALE+ NVENAF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALDIG--GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA+++ G + KG+ I++ K+DVSA+K+VGCC++
Sbjct: 181 KAVEVAENGTTSVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 193/217 (88%), Gaps = 1/217 (0%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
+ YRA+E+YDYL+KVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++V+DK+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +TF+N ERWL+ELR HTD+NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNKADLRHL AV+ EDA AFAER TF METSAL++ NV+ AF EVL QIYHVVSR
Sbjct: 123 MLVGNKADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRN 182
Query: 182 ALDIGGDPAALPKGQTINVG-GKDDVSAVKKVGCCNA 217
ALDIG DPAA P+G+TI+VG KD+VS V GCC+A
Sbjct: 183 ALDIGEDPAAPPRGKTIDVGAAKDEVSPVNTGGCCSA 219
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ NV+NAF EVL QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A+P KG+ I+V DVSA K+VGCC++
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDVN--KDVSAKKRVGCCSS 218
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/220 (77%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVE AF EVLTQIY++VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ D A A+P KG+ I+VG DVSA+KK GCC++
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVG--KDVSAMKKGGCCSS 218
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+YRADE+YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT++ +VE K
Sbjct: 1 MASYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELRGHTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK DLRHL AV TE+AKAFAERE+ +FMETSAL++ NVE+AFTEVL+QI+ +VS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+++D GGD LP KG+TINV K+D S +K++GCC+
Sbjct: 181 RSVDGGGDSTELPGKGETINV--KEDGSVLKRMGCCS 215
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 196/221 (88%), Gaps = 7/221 (3%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K +AERE+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALDIGGDPAA---LP-KGQTINVGGKDDVSAVKKVGCCNA 217
K+++ GGD A +P KG+ INV KDD SA+K+VGCC+
Sbjct: 181 KSVE-GGDEGAASSVPAKGERINV--KDDASALKRVGCCSG 218
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVE +F EVLTQIY+V+S+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ D A A+P KG+ I+VG DVSA+KK GCC++
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVG--KDVSAMKKGGCCSS 218
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 196/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVE AF EVLTQ+Y+VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSK 180
Query: 181 KALDIGGDPA--ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ D A A+P KG+ I+VG DVSA+KK GCC++
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVG--KDVSAMKKGGCCSS 218
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 191/217 (88%), Gaps = 1/217 (0%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
+ YRA+E+YDYL+KVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++V+DK+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF+N ERWL+ELR HTD+NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNKADLRHL AVS EDA AFAER TF METSAL++ NVE AF EVL QIYHVVSR
Sbjct: 123 MLVGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRN 182
Query: 182 ALDIGGDPAALPKGQTINV-GGKDDVSAVKKVGCCNA 217
ALDIG DPAA P+G+TI+V KD+VS V GCC++
Sbjct: 183 ALDIGDDPAAPPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 199/219 (90%), Gaps = 4/219 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K++AE+E+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALDIGGD-PAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ + A++P KG+ I++ K+DVSA+K+VGCC++
Sbjct: 181 KAVEGAENGTASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YR D++YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAIT AYYRGAVGALLVYDVTRHVTFENV RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTE+AK+ AERE +FMETSALE+ NVENAFTE LTQIY +VS+
Sbjct: 121 VMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 KALDIGGDPA---ALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A PKGQTIN+ KD+ SA KK GCC++
Sbjct: 181 KAVEAGDEGATSTAPPKGQTINI--KDEGSAWKKFGCCSS 218
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ +++K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVT+ENV RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVST++AK AERE +FMETSALE+ NVENAFTE LTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 KALDIGGDPA---ALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A PKG+TIN+ KD+ S+ KK GCC++
Sbjct: 181 KAVEAGDEGATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 192/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAF+EVL+QIYH+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSK 180
Query: 181 KALDIG--GDPAALPK-GQTINVGGKDDVSAVKKVGCCN 216
KA++ G G +A+P GQTINV K+D S K+ GCC+
Sbjct: 181 KAVEAGESGSSSAVPSIGQTINV--KEDSSVFKRFGCCS 217
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
+ YRA+E+YDYL+KVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++V+DK+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF+N ERWL+E R HTD+NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNKADLRHL AVS EDA AFAER TF METSAL++ NVE AF EVL QIYHVVSR
Sbjct: 123 MLVGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRN 182
Query: 182 ALDIGGDPAALPKGQTINV-GGKDDVSAVKKVGCCNA 217
ALDIG DPAA P+G+TI+V KD+VS V GCC++
Sbjct: 183 ALDIGDDPAAPPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 198/218 (90%), Gaps = 4/218 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++K+QIWDTAGQERYRAITSAYYRGA+GALLVYDVTRH TFENV+RWLKELR HTDSNIV
Sbjct: 61 VIKSQIWDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K++ E+E+ +F+ETSALE+ NVENAF EVLTQIY+VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSK 180
Query: 181 KALDIGGD-PAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ + A++P KG+ I++ K+DVSA+K+VGCC+
Sbjct: 181 KAVEGAENGTASVPAKGEKIDL--KNDVSALKRVGCCS 216
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/180 (89%), Positives = 172/180 (95%)
Query: 38 FSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
SLESKSTIGVEFATRSI V+DK+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 98 HVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSA 157
HVTFENVERW++EL+ HTD+NIVIMLVGNKADLRHL AVSTEDAKAFAE+ENTFFMETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 158 LESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
LESMNVENAFTEVLTQIYHVVS+KALDIG DPAA PKGQTINVGGKDDVSAVKK CC++
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 180
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 165/221 (74%), Positives = 193/221 (87%), Gaps = 7/221 (3%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M +++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MGTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K +AERE+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALDIGGDPAA---LP-KGQTINVGGKDDVSAVKKVGCCNA 217
K+++ GGD A +P KG+ INV KDD SA+K+VGCC+
Sbjct: 181 KSVE-GGDEGAASSVPAKGERINV--KDDASALKRVGCCSG 218
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/219 (73%), Positives = 192/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+ D++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAE+E+ +FMETSALE+ NVENAFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALDIGGD--PAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+ ++ G + +A+P KGQTINV KDD S +KK+GCC+
Sbjct: 181 RTVEAGKNASSSAVPSKGQTINV--KDDSSVLKKIGCCS 217
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/219 (73%), Positives = 192/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+ D++YDYL+K+V IGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKGDDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAE+E+ +FMETSALE+ NVENAFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALDIGGD--PAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G + +A+P KGQTINV KDD S +KK+GCC+
Sbjct: 181 RAVEAGNNASSSAVPSKGQTINV--KDDSSVLKKIGCCS 217
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 190/219 (86%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M YR D++YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+++ V+ K
Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAFTEVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G G + LP KGQTINV K+D S +K+ GCC+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINV--KEDSSVLKRFGCCS 217
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YR ++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL+ HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AE+E+ FMETSALE+ NVE+AF EVLTQIY + S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
K ++ G D A++PKG+ I V K+DVSA+KK+GCC+
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCS 215
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 191/217 (88%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
AYRA++DYDYL+K V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++V+ K+
Sbjct: 7 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 66
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELR HTDS+IV+
Sbjct: 67 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVV 126
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AVSTED + +AE E+ +FMETSAL++ NV+NAF+EVLTQIY + SRK
Sbjct: 127 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRK 186
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+D G D ++ P KG+ INV KDDVS++K+ GCC++
Sbjct: 187 TVDAGDDGSSAPSKGENINV--KDDVSSLKRAGCCSS 221
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 194/220 (88%), Gaps = 6/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL+ HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AERE+ +F+ETSALE++NVE AF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G G +A+P +G+ IN+ D S + ++ CC++
Sbjct: 181 KAVEGGENGSASAVPAQGEKINI---KDESGLNRIKCCSS 217
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YR ++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL+ HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AE+E+ FMETSALE+ NVE+AF EVLTQIY + S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
K ++ G D A++PKG+ I V K+DVSA+KK+GCC+
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCS 215
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 189/216 (87%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
AYRA++DYDYL+K V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++V+ K+
Sbjct: 8 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 67
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELR HTD +IV+
Sbjct: 68 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVV 127
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AVSTED + +AE E+ +FMETSAL++ NV+NAF EVLTQIY + SRK
Sbjct: 128 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRK 187
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+D G D +A P KG+ INV KDDVSA+K+VGCC+
Sbjct: 188 TVDAGEDGSAAPSKGEKINV--KDDVSALKRVGCCS 221
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 191/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YR ++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+ +V+ K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL+ HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AE+E+ FMETSALE+ NVE+AF EVLTQIY + S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
K ++ G D A++PKG+ I V K+DVSA+KK+GCC+
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCS 215
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 192/216 (88%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELR HTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AVST+DAK FAE E+ +FMETSAL++ NV+++F+EVLTQIY +VS+K
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
++ + AA P KG+ INV KDDVSA+K+VGCC+
Sbjct: 186 TVEASEEGAAAPGKGEKINV--KDDVSAMKRVGCCS 219
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/217 (73%), Positives = 190/217 (87%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
AYRA++DYDYL+K V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++V+ K+
Sbjct: 7 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 66
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELR HTD +IV+
Sbjct: 67 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVV 126
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AVSTED + +AE E+ +FMETSAL++ NV+NAF+EVLTQIY + SRK
Sbjct: 127 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRK 186
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+D G D ++ P KG+ INV KDDVS++K+ GCC++
Sbjct: 187 TVDAGDDGSSAPSKGENINV--KDDVSSLKRAGCCSS 221
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/220 (72%), Positives = 193/220 (87%), Gaps = 6/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQ RYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL+ HTDSNIV
Sbjct: 61 VIKAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AERE+ +F+ETSALE++NVE AF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G G +A+P +G+ IN+ D S + ++ CC++
Sbjct: 181 KAVEGGENGSASAVPAQGEKINI---KDESGLNRIKCCSS 217
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 192/216 (88%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELR HTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AVST+DAK FAE E+ +FMETSAL++ NV+++F+EVLTQIY +VS+K
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+++ + A P KG+ INV KDDVSA+K+VGCC+
Sbjct: 186 TVEVPEEGAVAPGKGEKINV--KDDVSAMKRVGCCS 219
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 192/216 (88%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELR HTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
ML+GNK+DLRHL AVST+DAK +AE E+ +FMETSAL++ NV+NAF+EVLTQIY +VS+K
Sbjct: 126 MLIGNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKK 185
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
++ + AA P KG+ INV KDDVSA+K+VGCC+
Sbjct: 186 TVEALEEGAAGPGKGEKINV--KDDVSAMKRVGCCS 219
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/214 (75%), Positives = 186/214 (86%), Gaps = 3/214 (1%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
YRA++DYDYL+K VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRSI+V+ K+VK
Sbjct: 9 YRAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVK 68
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELR HTD +IV+ML
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVML 128
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK+DLRHL AVSTED K +AE E+ +FMETSAL++ NVENAF EVLTQIY VS+K +
Sbjct: 129 VGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV 188
Query: 184 DIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+ D + P KG+ INV KDDVSA+K++GCC+
Sbjct: 189 EASDDGSNAPIKGEKINV--KDDVSALKRIGCCS 220
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 189/216 (87%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELR HTD +IV
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
ML+GNK+DLRHL AVSTED K FAE E+ +FMETSAL++ NV+NAF EVLTQIY +V++K
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
++ D +A P KG+ INV KDDVSA+K+VGCC+
Sbjct: 186 PVEAPEDGSAGPGKGEKINV--KDDVSAMKRVGCCS 219
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 189/216 (87%), Gaps = 3/216 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELR HTD +IV
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
ML+GNK+DLRHL AVSTED K FAE E+ +FMETSAL++ NV+NAF EVLTQIY +V++K
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
++ D +A P KG+ INV KDDVSA+K+VGCC+
Sbjct: 186 PVEAPEDGSAGPGKGEKINV--KDDVSAMKRVGCCS 219
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/200 (83%), Positives = 172/200 (86%), Gaps = 22/200 (11%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYDYL+K FSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MAAYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDS+IV
Sbjct: 39 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 98
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL AVS +DAKAFAERENTFFMETSALESMNVENAFTEVLTQIY VVSR
Sbjct: 99 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 158
Query: 181 KALDIGGDPAALPKGQTINV 200
KALDIG DPAALPKGQTIN+
Sbjct: 159 KALDIGDDPAALPKGQTINM 178
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 188/219 (85%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ V+ K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALD---IGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KA++ G + GQTINV K+D S +K+ GCC+
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINV--KEDFSVLKRFGCCS 217
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 188/219 (85%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ V+ K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALD---IGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KA++ G + GQTINV K+D S +K+ GCC+
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINV--KEDSSVLKRFGCCS 217
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 189/221 (85%), Gaps = 6/221 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+ ++YDYL+K+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD N+V
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK DLRHL V TED K+FAERE+ +FMETSAL++ NVE+AFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
Query: 181 KAL---DIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+++ DIG LP KGQTI+V KDD S +K++GCC++
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDV--KDDSSVLKRIGCCSS 219
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 188/219 (85%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+AD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL VSTED KAFAE+E+ +FMETSALE+ NVENAF+EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALDIGGDPAA--LP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G P+ +P +GQTINV +D S + + CC+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINV--NEDSSVLNRYRCCS 217
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/184 (82%), Positives = 174/184 (94%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AVSTED K++AE+E+ +FMETSALE+ NVENAF EVLTQIYH+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALD 184
KA++
Sbjct: 181 KAVE 184
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 187/219 (85%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+AD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL VSTED KAFAE+E+ +FMETSALE+ NVENAF+EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G + +P +GQTINV +D S + + CC+
Sbjct: 181 RAVEAGDRASTSVVPSQGQTINV--NEDSSVLNRYRCCS 217
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 184/219 (84%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+AD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEF T+S+ ++ K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL VSTED KAFAE+E+ +FMETSALE+ NVENAF+EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALDIG---GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
+A++ G A +GQTINV +D S + + CC+
Sbjct: 181 RAVEAGDRASTSVAPSQGQTINV--NEDSSVLNRYRCCS 217
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/213 (72%), Positives = 175/213 (82%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+ D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+V+ K +KA
Sbjct: 4 KPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENVERWLKELR H D+NIVIMLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DLRHL +V TEDAKAF ERE F+ETSALE+ NVE AF +LT+IYH+VS+KAL
Sbjct: 124 GNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALA 183
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
PAA P T + A KK CC++
Sbjct: 184 SEDGPAAAPTSGTAIKVTEAAPEAKKKSTCCSS 216
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 181/216 (83%), Gaps = 2/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++AD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL VST+DA+AF+E+E F+ETSALES NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKD-DVSAVKKVGCCNA 217
L + P GQ N+ D + +KK GCC A
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKKGCCGA 216
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/215 (71%), Positives = 180/215 (83%), Gaps = 1/215 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++AD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL VST+DA+AF+E+E F+ETSALES NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L + P GQ N+ D + K GCC+A
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKGCCSA 215
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 181/216 (83%), Gaps = 2/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++AD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL VST+DA++F+E+E F+ETSALES NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKD-DVSAVKKVGCCNA 217
L + P GQ N+ D + +KK GCC A
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKKGCCGA 216
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 179/216 (82%), Gaps = 2/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++AD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL V T+DA+AF+E+E F+ETSALES NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSA-VKKVGCCNA 217
L P GQ N+ D S +KK GCC A
Sbjct: 182 LASEESTTEGP-GQGTNIVPLDSNSPDLKKKGCCGA 216
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/214 (72%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++AD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL VS +DA++FAE+E F+ETSALES NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSA-VKKVGCC 215
L + P GQ N+ D S +KK GCC
Sbjct: 182 LASEENATEGP-GQGTNIVPLDSNSPDLKKKGCC 214
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA +RA++DYDYL+KV LIGDSGVGKSNL RFTRNEFSLESKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGFRAEDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVSTED AERE+ FMETSALE+ NV+NAF EVL++ +++R
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLAR 180
Query: 181 K--ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
+ L I A K + I+V DVSAVKKVGCC+
Sbjct: 181 RLWKLVIIDQDAVPSKSEKIDVS--KDVSAVKKVGCCS 216
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 178/215 (82%), Gaps = 1/215 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
+++ D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+V+ K +
Sbjct: 2 SHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL V TE A+AF ERE F+ETSALES NVE AF ++LT+IYH+VS+K
Sbjct: 122 LVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKV 181
Query: 183 LDIGGDPAALPKGQ-TINVGGKDDVSAVKKVGCCN 216
LD + + +G+ I + D KK GCC+
Sbjct: 182 LDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/164 (89%), Positives = 157/164 (95%)
Query: 54 SIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRG 113
SI V+DK+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 114 HTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQ 173
HTD+NIVIMLVGNKADLRHL AVSTEDAKAFAE+ENTFFMETSALESMNVENAFTEVLTQ
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 174 IYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
IYHVVS+KALDIG DPAA PKGQTINVGGKDDVSAVKK CC++
Sbjct: 121 IYHVVSKKALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 164
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/214 (71%), Positives = 174/214 (81%), Gaps = 2/214 (0%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
++AD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+V+ K +K
Sbjct: 3 HKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELR H DSNIVIML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIML 122
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK+DLRHL +V T+D++AF E+E F+ETSALES NVE AF +LT+IYH+VS+KAL
Sbjct: 123 VGNKSDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKAL 182
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P P T V + KK CC+
Sbjct: 183 ASEDKPQ--PDKGTRIVVSETQPEEKKKSACCSG 214
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--D 184
K+DLRHL AV T++AKAFAE+ + F+ETSAL+S NVE AF +LT+IYH+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDS 184
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G D + QTI V D KK+ CC
Sbjct: 185 PGDDESPSTNVQTITVAPTTDADTKKKLACC 215
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 180/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A RA+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+ +AE+E F+ETSALE+ NVENAF +L +IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKS 181
Query: 183 LDIGGDPAA--LPKGQTINVGGKDDVSAVKKVGCCNA 217
L DPAA + +G+TI VGG + + K CC +
Sbjct: 182 LS-SNDPAANIIKEGKTITVGGAPEPN-TNKPSCCTS 216
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/214 (71%), Positives = 177/214 (82%), Gaps = 3/214 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT+IYH+VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQIHDS 184
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCCNA 217
+ P QTI+V D K+V CCNA
Sbjct: 185 PSSDGSHPSNNVQTIHVAPTTDDDRKKRVQCCNA 218
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL++VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AV T++AK FAE+ N F+ETSAL+S NVE AF +LT+IY +VSRK+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSLPDS 184
Query: 187 GDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
G+ A P G TI++G ++ K CCN
Sbjct: 185 GNSGAGPDDGSTIDIGSTVTENSGNKKPCCN 215
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 175/211 (82%), Gaps = 3/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDS 184
Query: 187 GDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
D P QTI V D+ SA KK CC
Sbjct: 185 PDDENSPSNNVQTITVAPTDN-SADKKQKCC 214
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 179/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE+ NV+ AF +L++IY ++S+K
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKT 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L + P ++ G+TI VGG D + KK CC++
Sbjct: 182 LSSEESAAPVSVKDGKTIVVGGPD--PSTKKTTCCSS 216
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AV T++AK FAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSLPDS 184
Query: 187 GDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
G+ A P G TI++G ++ K CCN
Sbjct: 185 GNSGAGPDDGSTIDIGSTVTENSGNKKPCCN 215
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 181/217 (83%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE++NVE AF +L++IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ D A++ +GQTI+V + +A K CC++
Sbjct: 182 ISSDQTTANASIKEGQTIDVAATSESTAKKP--CCSS 216
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ +YDYL+KVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K VKAQ
Sbjct: 221 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 280
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVG
Sbjct: 281 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 340
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++AKAFA N F+ETSAL++ NVE AF +LT+IY +VS KAL
Sbjct: 341 NKSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 400
Query: 186 GGDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
D G+TI V DD A KK GCC
Sbjct: 401 SDDVIKPSGGETITVQPSADDGGATKKNGCC 431
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 166/183 (90%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+ D++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAE+E+ +FMETSALE+ NVENAFTEVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KAL 183
+ +
Sbjct: 181 RTV 183
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/217 (69%), Positives = 177/217 (81%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA +DE YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K
Sbjct: 1 MATKDSDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AV T+D+K+FAE+ N F+ETSAL++ NVE AF +LT+IYH+VS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQ 179
Query: 181 KALDIGGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
K + A +P QTI V + KK GCC
Sbjct: 180 KTIVNDDHVAKVPTSNVQTITVAPSEATDDKKKGGCC 216
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 177/217 (81%), Gaps = 7/217 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKA
Sbjct: 3 RTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+E+VERWLKELR H D +IVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK DLRHL AV T++AKAFAE+ N F+ETSAL+S NVE+AF ++LT IYH+VSRK +
Sbjct: 123 GNKNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMA 182
Query: 185 IGGDP--AALPKGQTINVG---GKDDVSAVKKVGCCN 216
GD AAL I + + D A KK CCN
Sbjct: 183 NDGDADIAALKNENKITIPPNESRKDPPASKK--CCN 217
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/218 (70%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR---VED 59
+++ D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ V+
Sbjct: 2 SHKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDG 61
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELR H D+NI
Sbjct: 62 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANI 121
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VIMLVGNK+DL+HL V TE A+AF ERE F+ETSAL+S NVE AF ++LT+IYH+VS
Sbjct: 122 VIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVS 181
Query: 180 RKALDIGGDPAALPKGQTINVGGKD-DVSAVKKVGCCN 216
+K LD + + +G+ + V K D A KK GCC+
Sbjct: 182 KKVLDSEDNRPKIGEGRDLIVIDKQHDDGAKKKGGCCS 219
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 8/215 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DLRHL AV TEDA+ +AER++ F+ETSAL+S NVE AF +LT+IY +VS+K L
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLGDS 183
Query: 184 DIGGDPAALPKGQTINVGGKDDVSA--VKKVGCCN 216
D GGD LP +++ D KK GCCN
Sbjct: 184 DRGGD---LPDNDVVDIHVPDSTPGNQRKKSGCCN 215
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 178/220 (80%), Gaps = 10/220 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D +A AERE F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDIGGDPAA----LP-KGQTINVGGKDDVSAVKKVGCCNA 217
L AA LP +G TINVG D S K GCC+A
Sbjct: 182 L--AAQEAAVGTILPGQGTTINVG---DASGNTKRGCCSA 216
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 179/213 (84%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVTFENV+RWLKELR H D NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV+T+DA+ +AE+ N F+ETSAL+S NVE AF +LT+IY +VSR+ ++ G
Sbjct: 124 KSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG 183
Query: 187 --GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
GD ++ +G+ + V +D+ A ++ C+
Sbjct: 184 ESGDSPSVGQGEKVIVSREDETKAAERKSKCSG 216
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 177/215 (82%), Gaps = 4/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL+HL AVS ED +A AE+E F+ETSALE++N+E AF +LT+IYH++S+KA
Sbjct: 122 MAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L + LP +G TINV D SA ++ CC+
Sbjct: 182 LAAQEASSNLPGQGTTINVA---DASANQRRSCCS 213
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 175/213 (82%), Gaps = 3/213 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT+IYH+VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIHDS 184
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCCN 216
+ P QTI+V D K+V CCN
Sbjct: 185 PTSDGSHPSNNVQTIHVAPTTDEDRRKRVQCCN 217
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 177/219 (80%), Gaps = 10/219 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D +A AERE F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDIGGDPAA----LP-KGQTINVGGKDDVSAVKKVGCCN 216
L AA LP +G TINVG D S K GCC+
Sbjct: 182 L--AAQEAAVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 180/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE++NVE AF +L+++Y ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKS 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ D A + +GQTI+V + +A K CC++
Sbjct: 182 ISSDQTTANANIKEGQTIDVAATSESNAKKP--CCSS 216
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 183/219 (83%), Gaps = 4/219 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV + +
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHC 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+LVGNKADLRHL AVSTED K++AE+E+ +FMETSALE+ NVEN+F EVLTQIY ++S+
Sbjct: 121 CVLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSK 180
Query: 181 KALDIG--GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G+ + KG+ I++ K+DVSA+K+VGCC++
Sbjct: 181 KAVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 178/214 (83%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--D 184
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE+AF ++LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRND 184
Query: 185 IGGDPAALPKG---QTINVGGKDDVSAVKKVGCC 215
DP+ P G + I++ D S +K CC
Sbjct: 185 TDNDPS--PSGDNVKPISIAPTDS-SDTRKKQCC 215
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 3/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVST+DA+ AERE F+ETSALE+ NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKA 181
Query: 183 LDIGG--DPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L G +LP G TINV S KK CC+
Sbjct: 182 LAAQGAASTTSLPHGTTINVSNMSG-SVEKKSACCS 216
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 178/219 (81%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ R DE YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI E K
Sbjct: 1 MASPREDE-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELR H D+N V
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AVSTE+A AFAE+ N F+ETSALE+ V++AF +LT+IY ++SR
Sbjct: 120 IMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSR 179
Query: 181 KALDIGGD-PAALPKGQTINVGGKDDVSAV---KKVGCC 215
K + + A+LP G +I + ++ + KK GCC
Sbjct: 180 KTIQAEENASASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 177/216 (81%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+ +AERE F+ETSALE+ NVE AF +L++IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L PA + +G+ I VGG + A K CC++
Sbjct: 182 LTSEEPAPANIKEGKMIVVGGSE---ANTKKPCCSS 214
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 177/219 (80%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ R DE YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI E K
Sbjct: 1 MASPREDE-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELR H D+N V
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AVSTE+A AFAE+ N F+ETSALE+ V+ AF +LT+IY ++SR
Sbjct: 120 IMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSR 179
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAV---KKVGCC 215
K + + A+LP G +I + ++ + KK GCC
Sbjct: 180 KTIQAEENATASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ +YDYL+KVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K VKAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA N F+ETSAL++ NVE AF +LT+IY +VS KAL
Sbjct: 123 NKSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 182
Query: 186 GGDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
D G+TI V DD KK GCC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ +YDYL+KVVLIGDSG GKSNLLSRFTRNEFSL+S+STIGVEFATRSI V+ K +KAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIV+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA N F+ETSAL++ NVE AF +LT+IYH+VS KAL
Sbjct: 123 NKSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQS 182
Query: 186 GGDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
D G+TI+V DD KK GCC
Sbjct: 183 SDDVIKPSGGETISVQPSTDDGGQTKKGGCC 213
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 179/216 (82%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+V+ K +
Sbjct: 2 APRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ T+ENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL V+T+DA+ F+E+E F+ETSALE+ NVE AF +LT+IY +VS+KA
Sbjct: 122 LVGNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKA 181
Query: 183 LDIGGDPAAL-P-KGQTINVGGKDDVSAVKKVGCCN 216
L DP + P +G+ I VG + D + KK CC+
Sbjct: 182 L-ASEDPVLVGPGEGKAIIVGPEQDAN-TKKKACCS 215
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 182/218 (83%), Gaps = 7/218 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE+ NVE AF +L++IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
L+ +PAA + +G+TI VG + A K CC++
Sbjct: 182 LN-SEEPAAANNIKEGKTIVVG---ESEANTKKACCSS 215
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+KVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVSTEDA++ AERE F+ETSALE+ NVE AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L LP+G TINV S CC+
Sbjct: 182 LAAQEANSSTGLPQGTTINVSNMS--SNAGNRSCCS 215
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 176/219 (80%), Gaps = 10/219 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VL GDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D +A AERE F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDIGGDPAA----LP-KGQTINVGGKDDVSAVKKVGCCN 216
L AA LP +G TINVG D S K GCC+
Sbjct: 182 L--AAQEAAVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 176/216 (81%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+ FAE+E F+ETSALE+ NVE AF +L +IY ++S+K
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKT 181
Query: 183 LDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L PA + +G+T+ V G D + KK CC++
Sbjct: 182 LSSDDPAPAGIKEGKTLVVDGSD--TNTKKT-CCSS 214
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 180/216 (83%), Gaps = 7/216 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE+ NVE AF +L++IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCC 215
L+ +PAA + +G+TI VG + A K CC
Sbjct: 182 LN-SEEPAAANNIKEGKTIVVG---ESEANTKKACC 213
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/218 (68%), Positives = 176/218 (80%), Gaps = 9/218 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D +A AE+E F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDIGGDPAA---LP-KGQTINVGGKDDVSAVKKVGCCN 216
L AA LP +G TINV D SA K GCC+
Sbjct: 182 L--AAQEAAGTSLPGQGTTINVA---DSSANTKRGCCS 214
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ +YDYL+KVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+ K VKAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++AKAFA N F+ETSAL++ NVE AF +LT+IY +VS KAL
Sbjct: 123 NKSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 182
Query: 186 GGDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
D G+TI V DD KK GCC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 171/210 (81%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSA ++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G P+ G I + + SA K CC
Sbjct: 182 GDTPSMPQTGTNIALSNPTEDSAAKNGKCC 211
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+I+VE K V
Sbjct: 2 AYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L GNK+DL HL AVS++DA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 122 LAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L ++P G TINV V+K CC+
Sbjct: 182 LAAQESASTTSVPHGTTINVSNMS--GTVEKKSCCS 215
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 176/218 (80%), Gaps = 9/218 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +DA+ AE+E F+ETSALE++NVE AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSA-VKKVGCCN 216
L AA LP G TINVG D+S + K CC+
Sbjct: 182 L--AAQEAASINLPHGTTINVG---DLSGNMNKRTCCS 214
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 176/217 (81%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K +
Sbjct: 2 AHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V+ ED +A AE+E F+ETSALE++NVE AF VL+ I+ ++S+KA
Sbjct: 122 MVGNKSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKA 181
Query: 183 LDIGGDPAALPKGQ--TINVGGKDDVSAVKKVGCCNA 217
L + P GQ TIN+ D SA K GCC++
Sbjct: 182 LAAQEAAGSGPPGQGTTINIA---DPSANTKRGCCSS 215
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN+ERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AV T++AK FAE+ F+ETSAL+S NVE AF +LT+IYH+VS+K +
Sbjct: 125 KCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIKDA 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ + Q I VG D KK CC
Sbjct: 185 PQNSEI-SSQPIVVGPTVDSDVKKKPQCC 212
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K++KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+E+VERWLKELR H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK FA F+ETSAL++ NV+ +F ++LT+IY +VS KAL+
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GQTI V D K+ GCC
Sbjct: 184 NNTIKPTSGQTILVSQTPD-EQTKQGGCC 211
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 176/214 (82%), Gaps = 5/214 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + VKAQI
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWLKELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL+HL AV+TEDA+++AE+E F+ETSALE+ NVE AF L +IY ++S+K+L
Sbjct: 129 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTA 188
Query: 187 GDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
+PAA + +G+TI +GG + + K CC +
Sbjct: 189 NEPAAAANIKEGKTIAIGGSETTNTNKP--CCTS 220
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKEL+ H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF ++LT IYH+VS+K +
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 187 G--DPAALPKGQTINVGGKDDVSAVKKVGCC 215
G DP+ I + D KK C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDNRKKSCAC 215
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 175/218 (80%), Gaps = 8/218 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNKADL HL AVS EDA+ AE+E F+ETSALE++NVE AF +L IYH++S+KA
Sbjct: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSA-VKKVGCCN 216
L + +P LP G TINV ++S K CC+
Sbjct: 182 LAAQEATSNP-GLPHGTTINVA---NISGNYNKRSCCS 215
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 170/215 (79%), Gaps = 4/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS EDA+ AE+E F+ETSALE+ N+E AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
L + LP+G TINV V K CC
Sbjct: 182 LAAQEAANSTGLPQGTTINVANLS--GNVNKRPCC 214
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 178/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R +E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H D NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE++NVE AF +L++IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ D A + +GQTI+V + + K CC++
Sbjct: 182 ISSDQASANANVKEGQTIDVAASSESNTKKP--CCSS 216
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 175/217 (80%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A RA+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE V
Sbjct: 2 ARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+ ++E+E F+ETSALE+ NVE AF +L +IY ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKS 181
Query: 183 LDIGGDPAA--LPKGQTINVGGKDDVSAVKKVGCCNA 217
L +PA+ + + TI VGG S K CC +
Sbjct: 182 LS-SNEPASANIKESMTITVGGPQ--SNASKPSCCTS 215
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 175/217 (80%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +A AE+E F+ETSALE++NVE AF VL+ I+ ++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKA 181
Query: 183 LDIGGDPAALPKGQ--TINVGGKDDVSAVKKVGCCNA 217
L + P GQ TINV D SA K GCC++
Sbjct: 182 LAAQEAAGSGPPGQGTTINVA---DSSANMKGGCCSS 215
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVY +T+ TFENV+RWL+ELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS+EDA+ AE+E+ F+ETSALE++NVE AF +L IY ++SRKA
Sbjct: 122 MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L +LP G TINV S V+K CC+
Sbjct: 182 LAAQEAASTTSLPHGTTINVSNLS--SNVEKKTCCS 215
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G ++++ D +A K CC
Sbjct: 182 GDGAQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
G P A + G I++ D SA K CC
Sbjct: 182 GDGPQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 174/209 (83%), Gaps = 6/209 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
AD++YD+L+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE+K +KAQ
Sbjct: 3 ADDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL+HL AV TE+A+ FAE + F+ETSALE+ NV++AFT +LT+IYH+VS+K +
Sbjct: 123 NKSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQV-- 180
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGC 214
AA K T+ K S K GC
Sbjct: 181 ----AAPEKPDTVIDPTKPQNSKEKSGGC 205
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 173/217 (79%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ + D DYDYL+K+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+SI E K
Sbjct: 1 MASPKED-DYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HV+FENVERWLKELR H D+N V
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AV TE+A AFAE+ N F+ETSALE++ V++AF +LT+IY ++SR
Sbjct: 120 IMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSR 179
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAV--KKVGCC 215
K + + ++P G I + V KK CC
Sbjct: 180 KTMQAEENQISIPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 2 AHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIL 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AV+ ED +A AERE+ F+ETSALE+ NVE AF +LT+IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKA 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + G+ +G TINV D S K CC+
Sbjct: 182 LAAQEAAGNSTLPGQGTTINVA---DTSGNTKRSCCS 215
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAV ALLVYD+ +H+T+ENVERWLKEL+ H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF ++LT IYH+VS+K +
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 187 G--DPAALPKGQTINVGGKDDVSAVKKVGCC 215
G DP+ I + D + KK C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDSRKKSCAC 215
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
GNK+DL HL AV +D + AERE F+ETSALE+ N+E AF +LT+IYH+VS+KAL
Sbjct: 123 AGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 DI--GGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
G LP +G TINVG D S K GCC+
Sbjct: 183 AAQEAGVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK+FA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A++ G +I + D SA K CC
Sbjct: 182 GDGAQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 180/216 (83%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A RADE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE+ NVE AF +L++IY +VS+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKS 181
Query: 183 LDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L PA++ G+TI VGG + + K CC++
Sbjct: 182 LSSEESAPASIKDGKTIVVGGPEPDT---KKTCCSS 214
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D A +E+E F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDI--GGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L A++P +G TINV D S K GCC+
Sbjct: 182 LAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 178/221 (80%), Gaps = 5/221 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA RA+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELR H DSNI
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIR 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL AV+T+DA++FAE E ++ETSALE+ NVE AF +L IY +S+
Sbjct: 121 IMLVGNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISK 180
Query: 181 K--ALDIGGDPAA--LPKGQTINVGGKDDVSAVKKVGCCNA 217
K A D G AA + +G+TINV D +A KK CC+A
Sbjct: 181 KPVASDESGQGAAGGVKEGKTINVATGGDAAAEKKQ-CCSA 220
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 177/216 (81%), Gaps = 6/216 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A RADE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ E K +
Sbjct: 2 ATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELR H ++NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
LVGNK+DLRHL AV T++A AF+E+ N F+ETSAL++ V+ AF +LT+IY ++SR+
Sbjct: 122 LVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRN 181
Query: 182 -ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
A + G + L GQTI++ ++ + CCN
Sbjct: 182 MAAEDGANAPQLSSGQTISLNAENK----PRRNCCN 213
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T+++K FAER F+ETSAL+S NVE AF ++LT+IY +VS+K + G
Sbjct: 125 KSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDG 184
Query: 187 GDPAALPKG--QTINVGGKDDVSAVKKVGCCNA 217
G+ P + I + + K CC +
Sbjct: 185 GNGEDSPSSDVKPITIPPTHGYTEPNKRKCCQS 217
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 230 RENDTSPSNNVVPIHVPPTTENKPKVQCC 258
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
G P A + G I++ D SA K CC
Sbjct: 182 GDGPQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--D 184
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF ++LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRND 184
Query: 185 IGGDPAALPKGQTINV--GGKDDVSAVKKVGCC 215
DP+ P G + D S +K CC
Sbjct: 185 ADNDPS--PSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 171/216 (79%), Gaps = 2/216 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++ D +YDYL+KVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVSTEDA++ AERE F+ETSALE+ NV+ AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L LP+G TINV + + C N
Sbjct: 182 LAAQEATSSTGLPQGTTINVSNMAGNAGGNRSCCSN 217
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 173/217 (79%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ + D DYDYL+K+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+SI E K
Sbjct: 165 MASPKED-DYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGK 223
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HV+FENVERWLKELR H D+N V
Sbjct: 224 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTV 283
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AV TE+A AFAE+ N F+ETSALE++ V++AF +LT+IY ++SR
Sbjct: 284 IMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSR 343
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAV--KKVGCC 215
K + + ++P G I + V KK CC
Sbjct: 344 KTMQAEENQISIPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P +N+ + + K+ CC
Sbjct: 185 QESDMSPSNNVVNIQVQPTENK-PKMQCC 212
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 2/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ K A K GCC
Sbjct: 182 GDGAQATIGAGTNISL-SKPAEDATAKSGCC 211
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/202 (71%), Positives = 168/202 (83%), Gaps = 5/202 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +DA+ AE+E F+ETSALE++NVE AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVG 201
L AA LP G TINVG
Sbjct: 182 L--AAQEAASINLPHGTTINVG 201
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 175/218 (80%), Gaps = 9/218 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNE LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +DA+ AE+E F+ETSALE++NVE AF +L IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSA-VKKVGCCN 216
L AA LP G TINVG D+S + K CC+
Sbjct: 182 L--AAQEAASINLPHGTTINVG---DLSGNMNKRTCCS 214
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 230 RENDMSPSNNVVPIHVPPTTENKPKVQCC 258
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K++LIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D A AE++ F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDI--GGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L A++P +G TINV D S K GCC+
Sbjct: 182 LAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 176/217 (81%), Gaps = 8/217 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE K +
Sbjct: 2 ARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL VSTEDA++FAE+E F+ETSALE+ NVE AF +L +I+ ++S+KA
Sbjct: 122 LVGNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKA 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + G A + +G+TI V D + K CC+
Sbjct: 182 LASEEAAG--AGIKEGKTIVVADPDTNT---KKACCS 213
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--D 184
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF ++LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRND 184
Query: 185 IGGDPAALPKGQTINV--GGKDDVSAVKKVGCC 215
DP+ P G + D S +K CC
Sbjct: 185 ADNDPS--PSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 170/209 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT IY++VS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D P + + + +A K+ CC
Sbjct: 185 SDADFSPSSNVVPITVQPTQNASKQGACC 213
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P +N+ + K+ CC
Sbjct: 185 QESDMSPSNNVVNIQVPPTENK-PKMQCC 212
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 171/210 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV ++AKAFAE+ F+ETSAL+S NVE AF +LT+IY +VS++ +
Sbjct: 125 KSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
GD + P + + + + ++ K+ CC
Sbjct: 185 GDDSFSPSSKVVPITVQPTQNSGKQSACCQ 214
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/220 (66%), Positives = 176/220 (80%), Gaps = 4/220 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA RA+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELR H DSN
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTR 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL AV+T+DA++FAE E ++ETSALE+ NVE AF +L IY VS+
Sbjct: 121 IMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSK 180
Query: 181 KAL---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K + ++G + +G+TI+V D +A KK CC+A
Sbjct: 181 KPVASDEVGAGQGGVKEGKTIDVATGADAAAHKKQ-CCSA 219
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D P +++ + K+ CC +
Sbjct: 185 RDNDMSPSNNVVSIQVQ-PTENKPKMQCCQS 214
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 172/217 (79%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL ++S ED ++ AE+E F+ETSALE+ N+E AF +L++IYH+VS+KA
Sbjct: 122 MAGNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKA 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + G A +G IN+ D A + GCC+
Sbjct: 182 LAAQEAAGSMAVPGQGTAINI---SDTYATNRRGCCS 215
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 71
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 131
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 132 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 188
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 189 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 222
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 173/211 (81%), Gaps = 4/211 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDN 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G L + I+ +D + +K GCC
Sbjct: 182 GEGGQQVLDRRPVIDPSKQD---SEQKPGCC 209
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL +V+ ED ++ AE+E F+ETSALE+ N+E AF +L++IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L LP +G IN+ D SA + GCC+
Sbjct: 182 LAAQEAAGNLPGQGTAINI---SDSSATNRKGCCS 213
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS+KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GGDPAA-LPKGQTINVGGKDDVSAVKKVGCC 215
G A + G I++ D A K CC
Sbjct: 182 GESAQANIGAGTNISLSKPADDGAAKGGKCC 212
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 173/211 (81%), Gaps = 4/211 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDN 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G L + I+ +D + +K GCC
Sbjct: 182 GEGGQQVLDRRPVIDPSKQD---SEQKQGCC 209
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 167/209 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 174/216 (80%), Gaps = 8/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCCNA 217
D AA + I+V D K+ CC +
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPTKLQCC 215
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 167/208 (80%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELR H D NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAF+ N F+ETSAL++ NVE+AF +LT IY +VS KALD GD
Sbjct: 126 DLKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGD 185
Query: 189 PAALPKGQTINVGGK-DDVSAVKKVGCC 215
G+TI V DD A + CC
Sbjct: 186 VIKPAGGETILVAPTADDGGAKQGSKCC 213
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK+FA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D + K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDESAKSGKCC 212
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADCAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 169/208 (81%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AVSTE+AKAFA + F+ETSAL++ NVE+AF +LT IY +VS K+L+ GD
Sbjct: 126 DLKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVG-CC 215
G+TI V D K+ G CC
Sbjct: 186 VIKPSGGETILVTPTADDGGAKQGGKCC 213
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 170/216 (78%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L GNK DL HL +VS EDA+ AE+E +ETSALE+ NVE AF +L IY ++S+KA
Sbjct: 122 LAGNKTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + LP+G TIN+G + + K CC+
Sbjct: 182 LAAQEAANSTGLPQGTTINIGNLS--TNINKKACCS 215
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADCAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AK F+ F+ETSAL++ NVE+AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVG-CC 215
P P G T+ V D SA + G CC
Sbjct: 186 PIKPPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 175/213 (82%), Gaps = 6/213 (2%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RADE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ E K +KA
Sbjct: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELR H ++NIV+MLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--A 182
GNK+DLRHL AV T++A AF+E+ N F+ETSAL++ V+ +F +LT+IY ++SR+ A
Sbjct: 124 GNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNMA 183
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GG+ L GQTI++ + + CC
Sbjct: 184 AEEGGNQPQLSTGQTISLNNDNK----PRRNCC 212
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 126 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 185
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 186 RENDMSPSNNVVPIHVPPTTENKPKMQCC 214
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDY++KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTGNKPKMQCC 213
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 174/211 (82%), Gaps = 2/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AKAFA + F+ETSA ++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALD- 180
Query: 186 GGDPAALPK-GQTINVGGKDDVSAVKKVGCC 215
GD A+P+ G TI + D A + CC
Sbjct: 181 SGDAQAIPQGGTTIPLSKTADDGAGQGGKCC 211
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 172/212 (81%), Gaps = 1/212 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R+D++YDYL+KVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ E KI+KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+ H D+NIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL AV+T+DA AFAE F+ETSAL++ NVE AF +L++IY + S+KAL+
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALE 182
Query: 185 IGGDPAALPKG-QTINVGGKDDVSAVKKVGCC 215
G P QTI + D +K CC
Sbjct: 183 KGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 95
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 96 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 155
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 156 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 212
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 213 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 246
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TEDAK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 --GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
GG + Q + + D K GCC
Sbjct: 182 GEGGQNPLGERRQVVEISKTQDTET--KQGCC 211
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 173/217 (79%), Gaps = 13/217 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 87
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 88 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 147
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 148 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 205
Query: 187 GDPAALPKGQTI---NVGGKDDVSAVKKVG----CCN 216
DP P+G TI NV D + G CC
Sbjct: 206 -DP---PEGDTIRPQNVEPIDVKPTMNSEGMRKPCCQ 238
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 169/216 (78%), Gaps = 4/216 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY+ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR+++VE K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L GNK+DL HL +VS EDA+ AE+E F+ETSALE+ NVE AF +L IY ++S+KA
Sbjct: 122 LAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 LDI--GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + LP+G TI + S + K CC+
Sbjct: 182 LTAQEAANSTGLPQGTTITIANLS--SNINKRACCS 215
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 170/217 (78%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGA LVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AV ED A AE+E F+ETSALE+ N+E AF +LT+IYH++S+K
Sbjct: 122 MAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKT 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + + +G TINV D S K GCC+
Sbjct: 182 LAAQEAAANSTVPGQGTTINVA---DASGNTKKGCCS 215
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 124
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 125 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 184
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 185 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 241
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 242 ADRAAHDESPGNNVVDISVPPTTDGQKPSKLQCC 275
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ET+AL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 175/213 (82%), Gaps = 5/213 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS+KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD- 180
Query: 186 GGDPAALPKG---QTINVGGKDDVSAVKKVGCC 215
G+ A P G +T+ + D A K+ CC
Sbjct: 181 QGESAQNPIGGERRTLEITNSADTEA-KQGKCC 212
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 171/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--ALD 184
K DLRHL AV TE+AKA++E+ F+ETSAL+S NVE AF +LT+IYH+VS+ A D
Sbjct: 125 KCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSSTAND 184
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ P L + TI D A K CC +
Sbjct: 185 VPSAP-ELGERTTIKPTEGDQQQASGKRQCCRS 216
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 172/216 (79%), Gaps = 5/216 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+ RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +A AE+E F+ETSALE++NVE AF +L+ I+ ++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKA 181
Query: 183 LDIGGDPAALP--KGQTINVGGKDDVSAVKKVGCCN 216
L + P +G TINV D S K GCC+
Sbjct: 182 LAAQEAAGSGPPTQGTTINVA---DSSGNTKKGCCS 214
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 175/214 (81%), Gaps = 4/214 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K DLRHL AV T++AK FAE+ N F+ETSAL+S NVE AF +LT+IY +VS++ L +
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQLREP 184
Query: 186 GGDPAAL-PKG-QTINVGGKDDVSAVKKVGCCNA 217
D + P +TINV V++ CCN+
Sbjct: 185 AEDEVTIRPNNVETINVKPTVSTENVRR-QCCNS 217
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 165/207 (79%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
++DYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAFA F+ETSAL++ NVE+AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P G +I V D + + CC
Sbjct: 186 PIKPPTGDSITVSPSVDTNQQQGGKCC 212
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 172/214 (80%), Gaps = 7/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKA+AE+ F+ETSAL+S NVE AFT +LT+IY VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVK--HVG 182
Query: 187 GDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
GD A P I + + K+ CC++
Sbjct: 183 GDNRAAISTPGSNGIVISPTAEPQTKKQ--CCSS 214
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAF+E+ F+ETSAL+S NVE AF +LT+IY +VS+K ++
Sbjct: 125 KSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDS 184
Query: 187 GDPAALPKGQTIN-VGGKDDVSAVKKVGCC 215
+ + GQ ++ V + K+ CC
Sbjct: 185 NNDEEVKDGQPVDIVISSTNPQPNKQSQCC 214
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSSKLQCC 215
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 170/210 (80%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G + G+ + A +K GCC
Sbjct: 182 GEGSQNVLGGERKVLEISKSADAEQKKGCC 211
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DS+IVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 171/215 (79%), Gaps = 15/215 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKA+AER F+ETSAL+S NVE AFT +LT+IY VS +
Sbjct: 125 KSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTR----- 179
Query: 187 GDPAALPKGQTINVGGKDDVS------AVKKVGCC 215
+P + + + +++++ A K CC
Sbjct: 180 ----QVPPDRIVPIHSQNNITLSSTNDAQNKKQCC 210
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 167/209 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+ NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 172/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYR ITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK+FA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
G A + G I++ D A K CC
Sbjct: 182 GDSAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 173/216 (80%), Gaps = 8/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT SI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCCNA 217
D AA + I+V D K+ CC +
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++AK FA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEASKGGKCC 212
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHGESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 176/217 (81%), Gaps = 14/217 (6%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD- 180
Query: 186 GGDPAALPKGQTINVGGKDDVSAVK-------KVGCC 215
GGD GQT+ +G + D+ + K GCC
Sbjct: 181 GGDA-----GQTV-LGDRRDMVRIDESEDPKTKQGCC 211
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 169/211 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL +V T++A+AFAER + F+ETSAL+ NVE AF +LT+IY +VS++ +
Sbjct: 125 KSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMHDS 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D + P + +A K CC A
Sbjct: 185 PDEDSPPGNSGPIQISPTEPNAGSKSNCCKA 215
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 171/212 (80%), Gaps = 2/212 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS+KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVG-CC 215
G A + G I + A K G CC
Sbjct: 182 GDSAQATIASGTNITLTPPPSDEAAKGGGKCC 213
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 170/211 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT IY++VS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D P + + + ++ K CC +
Sbjct: 185 SDSDFSPASNVVPITVEPTQNSSNKGACCQS 215
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D + K CC
Sbjct: 182 GDGAQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 98
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 99 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 158
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AKAFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 159 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 216
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 217 -DP---PEGDTI 224
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 173/217 (79%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +A AE+E F+ETSALE++NVE AF +L I+ ++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 LDIGGDPAALP--KGQTINVGGKDDVSAVKKVGCCNA 217
L + P +G TINV D + K GCC++
Sbjct: 182 LAAQEAAGSGPPTQGTTINV---TDSAVNTKRGCCSS 215
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 169/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT IY++VS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D P + + + ++ K CC
Sbjct: 185 TDSDFSPASNVVPISVEPTQTSSSKGSCC 213
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF VLT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCCNA 217
P I+V D K+ CC +
Sbjct: 185 SAHDESPGNNVVDISVPPTSDGQKGNKIQCCQS 217
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRS++V++K VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T+ENV RWLKELR H DSNIV+MLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV TE+AK FA F+ETSAL+S NVE AF +LT+IY +VS KAL+
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D GQTINV + + GCC
Sbjct: 184 NDVIRPTAGQTINVNQPTE-DEKQGGGCC 211
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+I+ +VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE- 180
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
GD +A G V + KK GCC
Sbjct: 181 SGDSSANQLGDRKVVEITKTPDSEKKPGCC 210
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V++K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA F+ETSAL++ NVE AF LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQ 181
Query: 186 GGDPAALPKGQTINVGGKDDVS-AVKKVGCC 215
G A +G I + A KK CC
Sbjct: 182 GEQTAGPSQGSAIPLSSSTPPGDATKKGQCC 212
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 171/212 (80%), Gaps = 2/212 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS+KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVG-CC 215
G A + G I + A K G CC
Sbjct: 182 GDSAQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRG VGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSSKLQCC 215
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 173/214 (80%), Gaps = 5/214 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ E K +
Sbjct: 2 ASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELR H ++NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL AV T++A AF+E+ N F+ETSAL++ V+ AF +LT+IY ++SR+
Sbjct: 122 LVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRN 181
Query: 183 LDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
+ + A + G I++ D KK GCC
Sbjct: 182 MQAEENANAPMSAGHKISLSQSGD----KKKGCC 211
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+I+ +VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE- 180
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
GD +A G V + KK GCC
Sbjct: 181 SGDSSANQLGDRKVVEITKTPDSEKKQGCC 210
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
P + I+V + + + CC
Sbjct: 185 PEGSVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 176/212 (83%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V++K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AVST+DAK FA F+ETSAL++ NVE AF + L +IY +VS KALD
Sbjct: 122 NKSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALD- 180
Query: 186 GGDPAALP-KGQTINVGGKDDVSAVKKVG-CC 215
G+P+ P +G I + G ++ A KK G CC
Sbjct: 181 QGEPSQGPGQGSAIPL-GPSNMPADKKSGQCC 211
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/207 (66%), Positives = 169/207 (81%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+K+VLIGDSGVGKSNLLSRFTRNEFS ++KSTIGVEFATRSI VE KI+KAQIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++ ++ENV+RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++A+AFA F+ETSAL++ NV++AF LT IY +VS + L+ +
Sbjct: 126 DLKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSAN 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P G T++VG D +A + GCC
Sbjct: 186 PIEAPSGNTVSVGPSLDSNAKQSNGCC 212
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
P + I+V + + + CC
Sbjct: 185 PEGSVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
P + I+V + + + CC
Sbjct: 185 PEGSVIRPNLENIDVKPTNPATDSVRKQCC 214
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 172/212 (81%), Gaps = 5/212 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+I+ +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALD- 180
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
GD A P + + + D + K GCC
Sbjct: 181 SGDSAQNPLSDRKVVEITKTQDPES--KQGCC 210
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 166/211 (78%), Gaps = 4/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK +AER F+ETSAL+S NVE AFT +LT+IY VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D G + K+ CCN+
Sbjct: 183 SDRQGYGGGSGTIIPAPPTEPPKKQ--CCNS 211
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-- 184
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G D + I++ D K+ CC +
Sbjct: 185 SGHDESPGNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE +F +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ + + K+ CC
Sbjct: 185 AAHEDSPGNNVVDISVTPTMDGQRSIKLQCC 215
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE +F +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ + + K+ CC
Sbjct: 185 AAHEDSPGNNVVDISVTPTMDGQRSVKLQCC 215
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCCNA 217
P +++ + + K+ CC +
Sbjct: 185 SGHEESPGNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 173/212 (81%), Gaps = 4/212 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL++VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-DI 185
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + D
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDR 184
Query: 186 GGDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
G + P +++ +K K CC
Sbjct: 185 PGHDES-PGNNVVDISVPPTTDGLKGNKFQCC 215
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +V +K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ +K K CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGLKGSKFQCC 215
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ K K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGSKLQCC 215
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 171/212 (80%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 --GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G P + + + D A +K GCC
Sbjct: 182 GEGSGPVLGNDRKVLEISKSAD--AEQKKGCC 211
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/206 (70%), Positives = 162/206 (78%), Gaps = 13/206 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-- 184
K+DLRHL AV T++AK +AER F+ETSAL+S NVE AFT +LT+IY VS K +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSD 184
Query: 185 -----------IGGDPAALPKGQTIN 199
I P PK Q N
Sbjct: 185 RQGYGGGGGTIIPAPPTEPPKKQCCN 210
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ K K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGSKLQCC 215
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 172/216 (79%), Gaps = 12/216 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRGH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL +V T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTIN------VGGKDDVSAVKKVGCCN 216
DP P+G I + K V+A + CC
Sbjct: 183 -DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRS++V++K VK+QI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T+ENV RWLKELR H DSNIV+MLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV TE+AK FA F+ETSAL+S NVE AF +LT+IY +VS KAL+
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D GQTINV + + GCC
Sbjct: 184 NDVIRPTAGQTINVNQPTE-DEKQGGGCC 211
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 168/210 (80%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ TF NV+RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T+DAKAFA F+ETSAL++ NVE AF + LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQ 181
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A +G +I + KK CC
Sbjct: 182 DTSGPAPGQGTSIPLSASTPAGEAKKGQCC 211
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 166/217 (76%), Gaps = 16/217 (7%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI- 185
K+DLRHL AV T++AK +AER F+ETSAL+S NVE AFT +LT+IY VS K +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
GG +P T K CCN+
Sbjct: 185 RQGYGGGSGTIIPAPPT----------EPPKKQCCNS 211
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 173/217 (79%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E + +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +A AE+E F+ETSALE++NVE AF +L I+ ++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 LDIGGDPAALP--KGQTINVGGKDDVSAVKKVGCCNA 217
L + P +G TINV D + K GCC++
Sbjct: 182 LAAQEAAGSGPPTQGTTINV---TDSAVNTKRGCCSS 215
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 112
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 113 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 172
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 173 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 232
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 233 SAHDESPGNNVVDISVPPTTDGQKSNKLQCC 263
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 166/209 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV ++AKA AE+ F+ETSAL+S NVE AF +LT IY++VS++ +
Sbjct: 125 KSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D P + + + +A K CC
Sbjct: 185 SDTDFSPNSNVVPITVQPTQNAAKSSACC 213
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQISDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCCNA 217
P +++ + + K+ CC +
Sbjct: 185 SAHEDSPGNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/192 (73%), Positives = 165/192 (85%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK FAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQRGSKLQCC 215
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV TE+AKAFAER F+ETSAL+S NV+ AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQTI 198
DP P+G TI
Sbjct: 182 RDP---PEGDTI 190
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 175/217 (80%), Gaps = 15/217 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+ FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQTI---NVGGKD-----DVSAVKKVGCC 215
DP P+G TI NV D + +V+K CC
Sbjct: 182 RDP---PEGDTIRPTNVEAIDVKPTVNTDSVRK-QCC 214
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 170/212 (80%), Gaps = 1/212 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R+D++YDYL+KVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIG EFATRSI+ E KI+KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+ H D+NIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL AV+T+DA AFAE F+ETSAL++ VE AF +L++IY + S+KAL+
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALE 182
Query: 185 IGGDPAALPKG-QTINVGGKDDVSAVKKVGCC 215
G P QTI + D +K CC
Sbjct: 183 KGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K++KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+I+ +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK-KVGCCNA 217
P +++ K K+ CC +
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKNKLPCCQS 216
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G--GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G + +++ D K GCC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPET--KQGCC 211
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/164 (83%), Positives = 153/164 (93%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
YRA++DYDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V+ K++K
Sbjct: 5 YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLK 64
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN ERWL+ELR HTD NIV+ML
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVML 124
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAF 167
+GNK+DLRHL AVST+D KAFAERE+ +FMETSALE+ NVENAF
Sbjct: 125 IGNKSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 174/217 (80%), Gaps = 15/217 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS K +
Sbjct: 125 KSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQI--- 181
Query: 187 GDPAALPKGQTI---NVGGKD-----DVSAVKKVGCC 215
DP P+G+TI NV D + +V+K CC
Sbjct: 182 RDP---PEGETIRPQNVEAIDVKPTVNTESVRK-QCC 214
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 175/218 (80%), Gaps = 14/218 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K+VKAQI
Sbjct: 5 EEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWLKEL+ H D+NIVIML GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL AVSTE+AK FAE+ + F+ETSAL+S NVE AF +LT+IY++V +KA
Sbjct: 125 KCDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKA---- 180
Query: 187 GDPA--------ALPKGQTINVGGKDDVSAVKKVGCCN 216
PA ++ + + I + + D + K+ CC
Sbjct: 181 --PADGGQGGGGSVSETKVIKIDDQKDEKSGSKMKCCQ 216
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 174/218 (79%), Gaps = 7/218 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R ++DYDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
+ GNKADL HL +V+ ED + AE E F+ETSALE+ NVE AF VL +IYH++S+K
Sbjct: 122 MAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 182 --ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + +A+P +G TINVG D S K GCC+
Sbjct: 182 LAAQEAAAANSAIPGQGTTINVG---DTSGAGKRGCCS 216
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AVST++AK FA F+ETSAL++ NVE+AF +LT IY +VS K+L+ GD
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINVGGK-DDVSAVKKVGCC 215
G+TI V DD A CC
Sbjct: 186 VIKPSGGETILVAPTADDGGAKSSSKCC 213
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 174/212 (82%), Gaps = 3/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA + F+ETSAL++ NVE AF LT+IY +VS KA++
Sbjct: 122 NKSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIE- 180
Query: 186 GGDPAALP-KGQTINVGGKDDVS-AVKKVGCC 215
G+P+ P +G +I +G A KK CC
Sbjct: 181 QGEPSQGPGQGTSIPLGPSHPPGDASKKGQCC 212
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 170/212 (80%), Gaps = 1/212 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK-KVGCCNA 217
P +++ K K+ CC +
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKNKLPCCQS 216
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+T+H ++ NV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAF+ F+ETSAL++ NVE+AF LT IY +VSR+ L+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVG-CC 215
P P G T + D SA G CC
Sbjct: 186 PIKPPTGDTRTINPSVDNSASAPSGKCC 213
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 165/208 (79%), Gaps = 2/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+++SKSTIGVEFATRSI V+ K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++H T+ NV+RWLKELR H DSNIVIMLVGNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
LRHL AV TE+A+AFA N F+ETSA+++ NVE AF +LT IY +VS KAL+ D
Sbjct: 127 LRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADA 186
Query: 190 AALPKGQTINV-GGKDDVSAVKKVG-CC 215
G TI V DD S G CC
Sbjct: 187 VGPTSGSTITVTPTSDDASKASGGGKCC 214
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCCNA 217
P +++ + + K+ CC +
Sbjct: 185 SAHDDSPGNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R+D++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S++ E K +KA
Sbjct: 3 RSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ +F VE+WLKELR H DSNIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL AVSTE+ K FAE+ + F+ETSAL++ NVE AFT++LT+IY +V +KAL
Sbjct: 123 GNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT 182
Query: 185 IGGDPAALPK-GQTINVGGKDDVSAVKKVGCCN 216
+P+ P G+++ V + K CC+
Sbjct: 183 NEKNPSFKPALGESVVVRDPAEDKGTHKKKCCS 215
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A + D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+V+ K +
Sbjct: 2 ARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL H+ AV +DA+ FAE+E FMETSALES NVE +F +LT+IY +V RK+
Sbjct: 122 LVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKS 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
L +A P +G INV + ++ KK CC
Sbjct: 182 LAAEEAASAGPSQGTPINVSDAETIA--KKRSCC 213
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/177 (76%), Positives = 161/177 (90%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 165/208 (79%), Gaps = 2/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YD+L+KVVLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFATRSI V+ K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++ ++ +V+RWLKELR H DSNIVIMLVGNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
LRHL AV TE+AKAFA N F+ETSA+++ NVE+AF +LT IY +VS KAL+ GD
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGDS 186
Query: 190 AALPKGQTINVGGKDDVSAVKKVG--CC 215
G TI V D A G CC
Sbjct: 187 VGPTSGSTITVTPTADDGAKSNAGGKCC 214
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AVST++AK FA F+ETSAL++ NVE+AF +LT IY +VS K+L+ GD
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINVGGK-DDVSAVKKVGCC 215
G+TI V DD A CC
Sbjct: 186 VIKPSGGETILVAPTADDGGAKSGSKCC 213
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 165/207 (79%), Gaps = 2/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AK F+ F+ETSAL++ NVE+AF +LT +Y +VS K+L+ D
Sbjct: 126 DLKHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSLEQSSD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P TI V D SA K G C
Sbjct: 186 PIRAPTSDTIPVAI--DSSAPTKNGSC 210
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/207 (68%), Positives = 164/207 (79%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
++DYL+KVVLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATRSI V+ K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AKAFA F+ETSAL++ NVE+AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P G TI V D A CC
Sbjct: 186 PIKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 173/218 (79%), Gaps = 13/218 (5%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ VTFENV RWLKELR H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TEDAK FAE + F+ETSAL++ NVE AF +LT+IY +VS K D
Sbjct: 122 NKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDN 181
Query: 186 GGDPAALPKGQTINVGGK--------DDVSAVKKVGCC 215
G P+ +G N+ G+ +D A K GCC
Sbjct: 182 G--PSGSTEGHQ-NLSGQSISLSQTANDPQA--KSGCC 214
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 169/204 (82%), Gaps = 3/204 (1%)
Query: 14 YKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQE 73
+++VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGNK+DLRHL
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 134 CAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALP 193
AV T++AKAFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + D P
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSP 184
Query: 194 KG--QTINVGGKDDVSAVKKVGCC 215
QTI+V D+ +A ++ CC
Sbjct: 185 SNNVQTIHVAPTDN-AAPRQQKCC 207
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L++KSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 G--GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G + +++ D K GCC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPET--KQGCC 211
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 171/216 (79%), Gaps = 12/216 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQTIN------VGGKDDVSAVKKVGCCN 216
DP P+G I + K V+A + CC
Sbjct: 182 RDP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCCNA 217
P +++ K K+ CC +
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGNKLQCCQS 217
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 173/218 (79%), Gaps = 13/218 (5%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ VTFENV RWLKELR H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TEDAK FAE + F+ETSAL++ NVE AF +LT+IY +VS K D
Sbjct: 122 NKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDN 181
Query: 186 GGDPAALPKGQTINVGGK--------DDVSAVKKVGCC 215
G P+ +G N+ G+ +D A K GCC
Sbjct: 182 G--PSGSNEGHQ-NLSGQSISLSQTANDPQA--KSGCC 214
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 164/209 (78%), Gaps = 4/209 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK +AER F+ETSAL+S NVE AFT +LT+IY VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G + S K CC
Sbjct: 183 TDRQGYGGGSGTII--PSPASDPPKKQCC 209
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 165/207 (79%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
++DYL+KVVLIGDSGVGKSNLLSRFTRNEF++E+KSTIGVEFATRSI VE K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AKAFA F+ETSAL++ NVE+AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSED 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P G TI V D + + CC
Sbjct: 186 PIKPTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 164/209 (78%), Gaps = 4/209 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK +AER F+ETSAL+S NVE AFT +LT+IY VS K +G
Sbjct: 124 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 181
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G + S K CC
Sbjct: 182 TDRQGYGGGSGTII--PSPASDPPKKQCC 208
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 166/209 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+ IVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/225 (64%), Positives = 173/225 (76%), Gaps = 17/225 (7%)
Query: 6 ADEDYDYLYK--------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA 51
A+++YD+L+K +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFA
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFA 61
Query: 52 TRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
TRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKEL
Sbjct: 62 TRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKEL 121
Query: 112 RGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL 171
R H DSNIVIMLVGNK+DLRHL AV T++AK FA N F+ETSAL++ NVE AF +L
Sbjct: 122 RDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNIL 181
Query: 172 TQIYHVVSRKALDIG-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
T+IY +VS KALD G A L G+TI V D + K GCC
Sbjct: 182 TEIYRIVSSKALDNGDSGQAPLSSGRTIEVSKAPDTES--KQGCC 224
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 174/213 (81%), Gaps = 5/213 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDYL+KVVLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+++VE+KI+KAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELR H DSNIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---D 184
DLRHL +V+ EDA +FAE E FF+ETSAL++ NVE AF VL +IY ++S+K L +
Sbjct: 133 TDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEE 192
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G L +GQ+I V + + + CC++
Sbjct: 193 SGLGSGNLREGQSIQVSATNSGALTSR--CCSS 223
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV+T++AKAF+ F+ETSAL++ NVE+AF +LT IY +VS K+L+ +
Sbjct: 126 DLKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTN 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
PK + I+VG D +A + CC
Sbjct: 186 NIEPPK-EGISVGPSLDSTATQGSKCC 211
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/222 (66%), Positives = 173/222 (77%), Gaps = 16/222 (7%)
Query: 7 DEDYDYLYK--------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE 58
D++YDYL+K VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 64
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSN
Sbjct: 65 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 124
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
IVIMLVGNK+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +V
Sbjct: 125 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 184
Query: 179 SRKALDIGGDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
S+K + D AA + I+V D K+ CC
Sbjct: 185 SQKQI---ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 223
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR+I V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AK FA F+ETSAL++ NVE+AF +LT IY +VS K L+ D
Sbjct: 126 DLKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P TI V D + CC
Sbjct: 186 PIKAPTSDTIPV-AIDSAAPASGSKCC 211
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 169/213 (79%), Gaps = 2/213 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCCNA 217
P +++ + K+ CC +
Sbjct: 185 SAHDESPGNNVVDISLPPTTEGQRGNKLPCCQS 217
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 173/214 (80%), Gaps = 3/214 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A + D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+V+ K +
Sbjct: 2 ARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL H+ AV +DA+ FAE+E FMETSALES NVE +F +LT+IY +V RK+
Sbjct: 122 LVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKS 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
L +A P +G IN + ++ KK CC
Sbjct: 182 LAAEEAASAGPSQGTPINASDAETIA--KKRSCC 213
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 169/218 (77%), Gaps = 13/218 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+V KI+KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T++NVERWL ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV ++A AFAE N F+ETSAL+S NVE AF +LT+IY++VS+K +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQM--- 181
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVG-------CCNA 217
DP P+G TI + + V CC +
Sbjct: 182 RDP---PEGDTIRPTNIEPIDVKPTVNSDNVRKQCCQS 216
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 171/216 (79%), Gaps = 12/216 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL +V T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQTIN------VGGKDDVSAVKKVGCCN 216
DP P+G I + K V+A + CC
Sbjct: 182 RDP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 166/207 (80%), Gaps = 4/207 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR+++V+ K VKAQIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDT 68
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ + TF+NV+RWLKELR H DSNIVIMLVGNK+D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSD 128
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L+HL AV T+ A++FAE N FMETSAL++ NVE AF +LT IY +VS KALD P
Sbjct: 129 LKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQNQGP 188
Query: 190 AALP-KGQTINVGGKDDVSAVKKVGCC 215
P +TI V ++ K GCC
Sbjct: 189 GLTPGPRETITVSKSEE---KKNGGCC 212
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 168/200 (84%), Gaps = 5/200 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFAT+SI+ E+KI+KAQI
Sbjct: 59 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQI 118
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFEN ERWLKELR H +SNIV+MLVGN
Sbjct: 119 WDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGN 178
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL VS E+AK FAE+ + F+ETSAL+S V+ AF ++LT+IY ++++K +
Sbjct: 179 KCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGN 238
Query: 187 GDPAALPKGQ----TINVGG 202
G+ +L GQ +N GG
Sbjct: 239 GNN-SLNIGQGERIALNSGG 257
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 165/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAF+ F+ETSAL++ NVE AF +LT IY +VS KAL+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALEQAAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVG-CC 215
+G +I V D A K+ G CC
Sbjct: 186 SIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 157/174 (90%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDT
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYR ITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+D
Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
LRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 175
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 174/218 (79%), Gaps = 7/218 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R ++DYDYL+K+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
+ GNKADL HL +V+ ED + AE E F+ETSALE+ NVE AF VL +IYH++S+K
Sbjct: 122 MAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 182 --ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + +A+P +G TINV +D S K GCC+
Sbjct: 182 LAAQEAAAANSAIPGQGTTINV---EDTSGAGKRGCCS 216
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 174/218 (79%), Gaps = 15/218 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV TE+AKAFAER F+ETSAL+S NV+ AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKG--------QTINVGGKDDVSAVKKVGCCN 216
DP P+G + I+V + V+K CC
Sbjct: 182 RDP---PEGDVIRPHNVEPIDVKPTMNTDGVRK-QCCQ 215
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 172/217 (79%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 2 GHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL+HL AV ED A AE+E F+ETSALE+ N+E AF +LT+IYH++S+KA
Sbjct: 122 MAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKA 181
Query: 183 LDIGGDP--AALP-KGQTINVGGKDDVSAVKKVGCCN 216
L + +P +G TINV D S GCC+
Sbjct: 182 LAAQEAAANSTVPGQGTTINVA---DASGNTSKGCCS 215
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 174/213 (81%), Gaps = 5/213 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +T++NV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TEDAK FA + F+ETSAL+S NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALD- 180
Query: 186 GGDPAALPK---GQTINVGGKDDVSAVKKVGCC 215
GGD + + Q +++ + ++ K CC
Sbjct: 181 GGDQHQVSQPGSSQPLHITPTAE-NSTKDTKCC 212
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 165/207 (79%), Gaps = 2/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF ++SKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+++V RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AKAF+ F+ETSAL++ NV++AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P TI V D SA + CC
Sbjct: 186 PIRAPTSDTIPVA--IDSSAPSQSKCC 210
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSG GKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD- 184
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG 181
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G + + Q I++ D K GCC
Sbjct: 182 ESGGASVGERRQIIDIEKTQDTE--NKGGCC 210
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 163/192 (84%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL +V T++A+ FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI--- 177
Query: 187 GDPAALPKGQTI 198
DP P+G I
Sbjct: 178 RDP---PEGDVI 186
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/190 (73%), Positives = 163/190 (85%), Gaps = 1/190 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ T++NV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD- 180
Query: 186 GGDPAALPKG 195
GD A P G
Sbjct: 181 SGDAAQAPTG 190
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/231 (63%), Positives = 174/231 (75%), Gaps = 23/231 (9%)
Query: 6 ADEDYDYLYK-------------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46
A+++YD+L+K VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTI
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTI 61
Query: 47 GVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER 106
GVEFATRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV R
Sbjct: 62 GVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNR 121
Query: 107 WLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENA 166
WLKELR H DSNIVIMLVGNK+DLRHL AV T++AK FA N F+ETSAL++ NVE A
Sbjct: 122 WLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELA 181
Query: 167 FTEVLTQIYHVVSRKALDIGGDP--AALPKGQTINVGGKDDVSAVKKVGCC 215
F +LT+IY +VS KA+ GGD A L G+TI V D + K GCC
Sbjct: 182 FQNILTEIYRIVSSKAIIEGGDSGQATLSSGRTIEVSKTPDTES--KQGCC 230
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 168/211 (79%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+ FAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVK--KVGCC 215
P +++ K K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 177/218 (81%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++++ K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELR H D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED++AF+E+E+ F+ETSALE++NVE AF VL++I+ +VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
L +A +G TINV + S K CC++
Sbjct: 182 LAAQESASANGRSMQGTTINVA---EPSTNTKGSCCSS 216
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 164/207 (79%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
++DYL+KVVLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+I V+ K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV TE+AKAF+ F+ETSAL++ NVE+AF +LT I+ +VS K+L+ GD
Sbjct: 126 DLKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
G T+ V D S + CC
Sbjct: 186 AIKPSSGDTLTVSPSVDTSNAQASKCC 212
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 175/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R + +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++++ K V
Sbjct: 131 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 190
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELRGH D+NIV+M
Sbjct: 191 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 250
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +AF+E+E F+ETSALE++NVE AF +L++I+ VS+KA
Sbjct: 251 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 310
Query: 183 LDIGGDPAALPK---GQTINVGGKDDVSAVKKVGCCNA 217
L + + G TINV + S V K CC++
Sbjct: 311 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 345
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 173/212 (81%), Gaps = 5/212 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDYL+K+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+VE KIVKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELR H DSNIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK---ALD 184
DL+HL +VS EDA +FAERE F+ETSAL++ NV+ AF VLT+IY ++S+K A +
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADE 192
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
G A+ +GQ+I V D S + CC+
Sbjct: 193 AGAGAGAVREGQSIQVSATDSSSFTSR--CCS 222
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 170/212 (80%), Gaps = 2/212 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V++K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T+DAKAFA F+ETSAL++ NVE AF + LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDN 181
Query: 186 GGDPAALP-KGQTINVGGKDDVSA-VKKVGCC 215
A P +G +I + + KK CC
Sbjct: 182 DAGSAGAPGQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 168/211 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQI
Sbjct: 4 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+ H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV ++A+AFAE+ F+ETSAL+S NVE AF +LT IY++VS++ +
Sbjct: 124 KSDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGR 183
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D P + + + + K CC +
Sbjct: 184 SDSDFSPASNVVPITVEPTQTLSNKGVCCQS 214
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 170/216 (78%), Gaps = 12/216 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LES STIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL +V T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQTIN------VGGKDDVSAVKKVGCCN 216
DP P+G I + K V+A + CC
Sbjct: 182 RDP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 165/207 (79%), Gaps = 2/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AK+FA N F+ETSAL++ NVE+AF +LT IY +VS K+L+ +
Sbjct: 126 DLKHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSAN 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P P ++ V D + + CC
Sbjct: 186 PIE-PPNSSVTVSATVDPTP-QGNKCC 210
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 170/217 (78%), Gaps = 5/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++++ K V
Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
+ GNK DL+HL AVS ED + AERE F+ETSALE+ N+E AF +LT+IYH++S+K
Sbjct: 122 MAGNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKKA 181
Query: 182 -ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A ALP +G TINV D K CC+
Sbjct: 182 LAAQEAAASTALPGQGTTINV--NDASGNQNKKTCCS 216
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 173/218 (79%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELR H D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED AF+E+E F+ETSALE++NVE AF VL++I+ +VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 L---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
L + +G TINV + A K CC++
Sbjct: 182 LAAQESASTNGRSMQGTTINVA---EAPAATKGSCCSS 216
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 167/210 (79%), Gaps = 1/210 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++D+ + +K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 135 AEKDF-HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 193
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVG
Sbjct: 194 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 253
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 254 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSD 313
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 314 RRENDMSPSNNVVPIHVPPTTENKPKVQCC 343
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ E K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++HVTFENVERWLKELR H ++NIV+ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL V+ E+A FA++ N F+ETSAL++ V++AF +LT+IY ++SRK I
Sbjct: 125 KSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKT--IA 182
Query: 187 GDPAALP---KGQTINV-GGKDDVSAVKKVGCCNA 217
+ A P +G+TI + +DD S K C +
Sbjct: 183 ANTATGPDLSRGETIALSSARDDASNRSKSSCAGS 217
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 166/206 (80%), Gaps = 1/206 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+KVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ E KI+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+ H D+NIVIMLVGNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+HL AV+T+DA AFAE F+ETSAL++ NVE AF +L++IY + S+KAL+ G
Sbjct: 130 QHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSN 189
Query: 191 ALPKG-QTINVGGKDDVSAVKKVGCC 215
P QTI + D +K CC
Sbjct: 190 FAPNATQTIVINPPADEGKTEKAKCC 215
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 171/211 (81%), Gaps = 5/211 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+ + K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ VT+ENVERWL ELR H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS-RKALDI 185
K+DLRHL AV TE A A AE+ F+ETSAL+S NVE AF ++LT+I+H+V+ K L+
Sbjct: 124 KSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLET 183
Query: 186 GGDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
D ++ + + + VGG A KK G C
Sbjct: 184 KKDSQSVDGETEVVQVGGD---PAPKKAGAC 211
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 165/210 (78%), Gaps = 1/210 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
++E+YD+L+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQ
Sbjct: 3 SEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H ++ENV RWLKELR H DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL+HL AV E+A FAE + F+ETSAL+S NVE AF +LT IY +VS++++
Sbjct: 123 NKSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKA 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G P TI VG D + G C
Sbjct: 183 GESDKTTP-SDTIVVGPTDSSTTETSKGGC 211
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 175/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R + +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++++ K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELRGH D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +AF+E+E F+ETSALE++NVE AF +L++I+ VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
L + +G TINV + S V K CC++
Sbjct: 182 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 216
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 156/179 (87%), Gaps = 2/179 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VE K VKAQIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HVT+E VERWLKELR H D NIVIMLVGNK+D
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSD 152
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
LRHL AV T++AKA+AE+ F+ETSAL+S NVE AFT +LT+IY VS K GGD
Sbjct: 153 LRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVK--HFGGD 209
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 171/215 (79%), Gaps = 11/215 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+++ENVERWL+ELR H D NI+IMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL ++ TE+AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQMR-- 182
Query: 187 GDPAALPKGQTINVGGKD-DVSAVK----KVGCCN 216
DP P+G I + DV A + CC
Sbjct: 183 -DP---PEGDVIRPDAEPADVRAAGADAVRRNCCQ 213
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 162/207 (78%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
++D+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ ++ K VKAQIWD
Sbjct: 6 NFDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWLKELR H D NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAF+ F+ETSAL++ NVE+AF +LT IY +VS K+L+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P G I V D A CC
Sbjct: 186 PIKPSTGDNILVTPSVDPQAQSGSKCC 212
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK+FA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
G A + G I++ D A K CC
Sbjct: 182 GDSAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 163/201 (81%), Gaps = 3/201 (1%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 6 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 65
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 66 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 125
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-GDPAALPK 194
V T++AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD G A L
Sbjct: 126 VPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAPLSS 185
Query: 195 GQTINVGGKDDVSAVKKVGCC 215
G+TI V D + K GCC
Sbjct: 186 GRTIEVSKAPDTES--KQGCC 204
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AK FA F+ETSAL++ NVE+AF +LT IY +VS K+L+
Sbjct: 126 DLKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSTS 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
PK ++I+VG D + CC
Sbjct: 186 NIEPPK-ESISVGITQDTKQQQGKTCC 211
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/198 (69%), Positives = 165/198 (83%), Gaps = 1/198 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDYL+K+VLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR+I VE K +KAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV+RWLKELR H DSNIVIML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL+HL +V+ EDA +FAERE F+ETSAL++ NV+ AF VL +IY ++S+KAL
Sbjct: 133 MDLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD 192
Query: 188 DPA-ALPKGQTINVGGKD 204
A A+ +GQ+I V D
Sbjct: 193 SGAGAVKEGQSIQVSAGD 210
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 174/218 (79%), Gaps = 7/218 (3%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
+R D++YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ +VE K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK-- 181
GNK+DL HL +V+ ED ++ AE+E F+ETSALE+ NVE AF +L +IYH++S+K
Sbjct: 123 AGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL 182
Query: 182 -ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A + +A+P +G TINV DD S K CC++
Sbjct: 183 AAQEAAAANSAIPGQGTTINV---DDTSGGAKRACCSS 217
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 172/211 (81%), Gaps = 4/211 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A ++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+++SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ASDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H+T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV+T++AKAFA + F+ETSAL++ NVE AF +LT+IY +VS K L
Sbjct: 122 NKSDLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPE 181
Query: 186 GGDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
++P +G ++ K+D K CC
Sbjct: 182 NEHGGSIPDRGIPLSDQPKNDQGGGK---CC 209
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 161/205 (78%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
RH AV T++A+AFAE+ F+ET AL+S NVE AF +LT+IY +V +K + +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND 180
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCC 215
P + + KV CC
Sbjct: 181 MFPSNNVVPIHVPPTTENKPKVQCC 205
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 173/217 (79%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELR H DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVII 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
L GNK+DL+HL AVS +D +A ++E F+ETSALE++NV+ AF +LT IYH++S+K
Sbjct: 122 LAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKA 181
Query: 182 -ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A ALP +G TINV D SA K GCC+
Sbjct: 182 LAAQEAAASTALPGQGTTINVS---DNSANVKRGCCS 215
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 171/213 (80%), Gaps = 5/213 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDYL+KVVLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+I+V+ K +KAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELR H DSNIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DLRHL +V+ EDA +FAE E FF+ETSAL++ NVE AF VL +IY ++S+K L
Sbjct: 133 IDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEE 192
Query: 188 DPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
+ L +GQ+I V + + + CC++
Sbjct: 193 SGSGSGNLREGQSIQVSATNSSALTSR--CCSS 223
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 154/174 (88%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 192
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 193 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 252
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT + R
Sbjct: 253 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHRAWPR 306
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 168/211 (79%), Gaps = 4/211 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE KI+KAQIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDT 75
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGA+GA+LVYDVT+ TFEN+ RWLKELR H D+NI IMLVGNK D
Sbjct: 76 AGQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTD 135
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L+HL AV+T+DA ++AE E ++ETSALE+MNVE AF +L IY +S+KA+ D
Sbjct: 136 LKHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDR 195
Query: 190 AA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
AA + +G+TINV KK CC+A
Sbjct: 196 AAAAGVKEGKTINVAATASDGGEKK-QCCSA 225
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 169/211 (80%), Gaps = 4/211 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDV---VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 58
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVG
Sbjct: 59 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 118
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T++AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 119 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 178
Query: 186 G-GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G A + G I++ D A K CC
Sbjct: 179 GDGAQATIGAGTNISLSKAADDEASKSGKCC 209
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+V++K VKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +++T+EN E WLKEL+ H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++AK+FAE+ F+E SAL+S NVE AF +LT+IY +VS++ L G
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 187 GDPAALPKGQTIN-VGGKDDVSAVKKVGCCN 216
+ G TI + ++ CC
Sbjct: 185 QPESEFSHGTTIEPIKVLPTQQGARETPCCQ 215
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 168/217 (77%), Gaps = 6/217 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+V KI+KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T++NVERWL ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-I 185
K+DLRHL AV ++A AFAE N F+ETSAL+S NVE AF +LT+I+ VS + +D +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSM 184
Query: 186 GGDP----AALPKGQTINVGGKDDVSAVK-KVGCCNA 217
GD P +D +A + K CCNA
Sbjct: 185 DGDEIDKVCMKPIRIDATTANTNDSAAFQIKQFCCNA 221
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R + +YDYL+K+VLIGDSGVGKSN+ SRFTRNEF LESKSTIGVEFATR+++++ K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELRGH D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED +AF+E+E F+ETSALE++NVE AF +L++I+ VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
L + +G TINV + S V K CC++
Sbjct: 182 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 216
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 156/177 (88%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++Y VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 171/212 (80%), Gaps = 4/212 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+K VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I +++K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL HL AVSTE+A+AFA N F+ETSA+++ NVE AF VLT+I+ +VS +A++ G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAME-G 182
Query: 187 GDPAALPK-GQTINVGGK-DDVSAVKKVG-CC 215
GD A P GQT+N+ D K G CC
Sbjct: 183 GDEGAHPSAGQTLNIAPTIGDSGKSKSSGQCC 214
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 163/207 (78%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAF+ F+ETSAL+ NVE AF +LT IY +VS KAL+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAAPD 185
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
G++I + + +A +K G
Sbjct: 186 VIKPSGGESITIAPSSNTNANEKSGLI 212
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 154/169 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 83 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 165/206 (80%), Gaps = 8/206 (3%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQER 74
KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + D AA +
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI---ADRAAHDE 177
Query: 195 GQ-----TINVGGKDDVSAVKKVGCC 215
I+V D K+ CC
Sbjct: 178 SPGNNVVDISVPPTTDGQKPNKLQCC 203
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 161/204 (78%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
L +VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQ
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 112
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRH
Sbjct: 113 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 172
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAAL 192
L AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + +
Sbjct: 173 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 232
Query: 193 PKGQTINVGGKDDVSAVKKVGCCN 216
P + + KV CC
Sbjct: 233 PSNNVVPIHVPPTTENKPKVQCCQ 256
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 173/216 (80%), Gaps = 5/216 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R +E+YDYL+KVVLIGDSGVGKSNL SRFTRNEF LESKSTIGVEFATR++ VE ++V
Sbjct: 2 ARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +FENV RWLKELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL V+TEDA+++AE+E F+ETSALE+ NV+ AF +L QIY ++S+K+
Sbjct: 122 LIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKS 181
Query: 183 LDIGG-DPAA--LPKGQTINVGGKDDVSAVKKVGCC 215
L DP+A + +G TI + G + K CC
Sbjct: 182 LSSSSTDPSAPNIKQGNTITIEGGLQPNTSKS--CC 215
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/223 (65%), Positives = 173/223 (77%), Gaps = 9/223 (4%)
Query: 1 MAAYRA------DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS 54
MAA RA ++YDYL+KVVLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR+
Sbjct: 1 MAARRAAAWEQGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRT 60
Query: 55 IRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGH 114
+VE K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELR H
Sbjct: 61 TQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDH 120
Query: 115 TDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
DSNIVIML+GNK DLRHL +V+T+ A FAE E F+ETSAL++ NV+ AF VL +I
Sbjct: 121 ADSNIVIMLIGNKTDLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEI 180
Query: 175 YHVVSRKALDIGGDPAA-LPKGQTINVGGKDDVSAVKKVGCCN 216
+ V+S+KAL A + +GQ+I V G + S + CC+
Sbjct: 181 HRVISKKALTTEDSGAGVVGEGQSILVSGGEPTSVSSR--CCS 221
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 169/217 (77%), Gaps = 13/217 (5%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKS++LSRFTRNEF+++SKSTIGVEFATRS+ V+ K +KAQIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDT 67
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++ +F NVERWLKEL+ H DSNIVIMLVGNK+D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSD 127
Query: 130 LRHLCAVSTEDAKAFAERENTF-----------FMETSALESMNVENAFTEVLTQIYHVV 178
L+HL AV T +A+++ E ++ F+ETSAL+S NVE AF +LT IY +V
Sbjct: 128 LKHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLV 187
Query: 179 SRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ KAL+ GGD G+TINV D S KK GCC
Sbjct: 188 ATKALE-GGDSIKPTNGETINVQPTSD-SDNKKAGCC 222
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 169/212 (79%), Gaps = 3/212 (1%)
Query: 6 ADEDYD--YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
A+++YD Y+ VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K
Sbjct: 2 ANDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIK 61
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
+QIWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELR H DSNIVIML
Sbjct: 62 SQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIML 121
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK+DLRHL AV T++AK FA N F+ETSAL++ NVE AF +LT+I+ +VS KAL
Sbjct: 122 VGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL 181
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GD +A G V + KK GCC
Sbjct: 182 E-SGDSSANQLGDRKVVEITKTPDSEKKPGCC 212
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 168/228 (73%), Gaps = 19/228 (8%)
Query: 7 DEDYDYLYK-------------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIG 47
D++YDYL+K +VLIGDSGVGKSNLLSRFTRNEF+LESKSTIG
Sbjct: 6 DDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 65
Query: 48 VEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW 107
VEFATRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERW
Sbjct: 66 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW 125
Query: 108 LKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAF 167
LKELR H DSNIVIMLVGNK+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF
Sbjct: 126 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 185
Query: 168 TEVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+LT+IY +VS+K + + P + + K+ CC
Sbjct: 186 QTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCC 233
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 163/207 (78%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
+ +++ VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDT
Sbjct: 76 FCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 135
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+D
Sbjct: 136 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 195
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
LRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + +
Sbjct: 196 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREN 255
Query: 190 AALPKGQTINVGGKDDVSAVKKVGCCN 216
P + + KV CC
Sbjct: 256 DMSPSNNVVPIHVSPTTENKPKVQCCQ 282
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 173/216 (80%), Gaps = 7/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE KI+KAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELR H D+NI IMLVGN
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI- 185
K DL+HL AV+T+D ++FAE E ++ETSALE+ NVE AF +L IY +S+KA+ +
Sbjct: 136 KTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALD 195
Query: 186 ----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
GG + +G+TINV D ++ +K CC+A
Sbjct: 196 DGGAGGAGGGVKEGKTINVAASD--TSGEKKQCCSA 229
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 169/210 (80%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V++K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++++T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV T+DAK FA + F+ETSAL++ NVE AF +LT+IY++VS K+
Sbjct: 122 NKSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAE 181
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
P+ N+ + + GCC
Sbjct: 182 EDGKKFDPREGGTNITLSQEGPKGESKGCC 211
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 160/202 (79%)
Query: 14 YKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQE 73
+ VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 134 CAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALP 193
AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + + P
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 180
Query: 194 KGQTINVGGKDDVSAVKKVGCC 215
+ + KV CC
Sbjct: 181 SNNVVPIHVPPTTENKPKVQCC 202
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 159/200 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + + P
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 235
Query: 196 QTINVGGKDDVSAVKKVGCC 215
+ + K+ CC
Sbjct: 236 NVVPIHVPPTTENKPKMQCC 255
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 159/202 (78%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQER 74
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 292
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + + P
Sbjct: 293 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPS 352
Query: 195 GQTINVGGKDDVSAVKKVGCCN 216
+ + KV CC
Sbjct: 353 NNVVPIHVPPTTENKPKVQCCQ 374
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 166/215 (77%), Gaps = 1/215 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M + + E+YDYLYK+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ E K
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERW+ ELR + D NI
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL VST++AK F+E+ F+ETSAL+S NVE AF +LTQIYH++SR
Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ G +TI + + A K GCC
Sbjct: 181 PSHSTGPQTTIDSNTETIILPTTSEPPAAKS-GCC 214
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 163/192 (84%), Gaps = 6/192 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+++ENVERWL+ELR H D NI+IMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL ++ TE+AKAFAE F+ETSAL+S NVE AF +LT+IY +VS++ +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM--- 181
Query: 187 GDPAALPKGQTI 198
DP P+G I
Sbjct: 182 RDP---PEGDVI 190
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 171/232 (73%), Gaps = 21/232 (9%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED--- 59
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLS 61
Query: 60 --------------KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE 105
K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV
Sbjct: 62 LSLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVL 121
Query: 106 RWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVEN 165
RWL+ELR H DSNIVIM+ GNK+DL HL +V+ ED ++ AE+E F+ETSALE+ N+E
Sbjct: 122 RWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEK 181
Query: 166 AFTEVLTQIYHVVSRKALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
AF +L++IYH++S+KAL LP +G IN+ D SA + GCC+
Sbjct: 182 AFQTILSEIYHIISKKALAAQEAAGNLPGQGTAINIS---DSSATNRKGCCS 230
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 150/166 (90%), Gaps = 3/166 (1%)
Query: 52 TRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
TRS+R+ DK VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR VTFENV+RWLKEL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 112 RGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL 171
R HTD+NIVIMLVGNKADLRHL AV TE+A AFAERENT+FMETSALES+NV+NAF EVL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 172 TQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
++IY+VVSRK L+ G DP ALP+GQTIN+G DVSAVKK GCC+A
Sbjct: 121 SEIYNVVSRKTLEKGNDPGALPQGQTINLG---DVSAVKKPGCCSA 163
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/166 (80%), Positives = 152/166 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
K+DLRHL AV T++AKAFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+K VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I +++K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL HL AVSTE+A+AFA N F+ETSA+++ NVE AF VLT+I+ +VS ++L+ G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG 183
Query: 187 GDPAALPKGQTINVGGK-DDVSAVKKVG-CC 215
D GQT+N+ +D++ K CC
Sbjct: 184 DDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 175/218 (80%), Gaps = 5/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A++ D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+T++++VE K V
Sbjct: 2 AHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELR H DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIV 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
++GNK+DL HL +VS +D + AE+E F+ETSAL++ N++ AF +LT+IYH++S+KA
Sbjct: 122 MIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKA 181
Query: 183 LDIGGDPAALP---KGQTINVGGKDDVSAVKKVGCCNA 217
L A++ +G TINV D + GCC++
Sbjct: 182 LAAQEAAASITHPGQGTTINV--SDTSGDSNRRGCCSS 217
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 171/215 (79%), Gaps = 10/215 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVI+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGN 124
Query: 127 KADLRHLCAVST-EDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
K+DLRHL AV +A+AFAER + F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVCPLTEARAFAERHLS-FIETSALDSTNVEEAFKNILTEIYRIVSQKQI-- 181
Query: 186 GGDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 -ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/215 (64%), Positives = 166/215 (77%), Gaps = 1/215 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M+ + DED + +VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K
Sbjct: 1 MSNNQNDEDTTPEF-LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 179
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
K + + P + + K+ CC
Sbjct: 180 KQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCC 214
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 173/217 (79%), Gaps = 9/217 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF+RNEFS++SK+TIGVEF T+++ ++ K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDA+ FAEREN FFMETSALES NVE AF +LT+IY ++S+K+L
Sbjct: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
DIG +P AL KG +I V G+D S K GCC A
Sbjct: 189 EEIDIGSNP-ALFKGTSIVVPGQDQDSGRK--GCCFA 222
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 176/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++E K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELR H D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+VGNK+DL HL +V ED++AF+E+E F+ETSALE++NVE AF VL++I+ +VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 LDIGGDPAA---LPKGQTINVGGKDDVSAVKKVGCCNA 217
L AA +G TINV + S K CC++
Sbjct: 182 LAAQESAAANGRSMQGTTINVA---EPSTNAKGSCCSS 216
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 159/200 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + + P
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 182
Query: 196 QTINVGGKDDVSAVKKVGCC 215
+ + KV CC
Sbjct: 183 NVVPIHVPPTTENKPKVQCC 202
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 152/168 (90%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDT
Sbjct: 17 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 76
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+D
Sbjct: 77 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 136
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHV 177
LRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +
Sbjct: 137 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 163/207 (78%), Gaps = 3/207 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELR H DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AKAFA F+ETSAL++ NVE+AF +LT IY +VS K+L+
Sbjct: 126 DLKHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLE-SSS 184
Query: 189 PAALPKGQTINVGGKDDVSAVKKVGCC 215
P Q I+V + A K CC
Sbjct: 185 TNIEPPTQGISVTAPE--PADKGGKCC 209
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 164/205 (80%), Gaps = 8/205 (3%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + D AA +
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI---ADRAAHDES 177
Query: 196 Q-----TINVGGKDDVSAVKKVGCC 215
I+V D K+ CC
Sbjct: 178 PGNNVVDISVPPTTDGQKPNKLQCC 202
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 166/214 (77%), Gaps = 1/214 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+ ++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I V+ +KA
Sbjct: 3 KDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ ++E+VE+WLKELR H D+NIVIML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLI 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL- 183
GNK DL+HL V TEDA+ FA E F ETSALES NVE AF ++LT+++ +VS+K+
Sbjct: 123 GNKCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQS 182
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ D + TI V +D K CC+A
Sbjct: 183 NESNDQSQRHGSSTIEVNAINDGVKKSKSQCCSA 216
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 163/201 (81%), Gaps = 3/201 (1%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVGNK+DLRHL AV
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP--AALPK 194
TE+AKAFA + F+ETSAL++ NVE AF +LT+IY +VS KALD GGD A +
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD-GGDSAQATIGA 183
Query: 195 GQTINVGGKDDVSAVKKVGCC 215
G I++ D A K CC
Sbjct: 184 GTNISLSKPADDDASKGGKCC 204
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 172/229 (75%), Gaps = 22/229 (9%)
Query: 6 ADEDYDYLYK-----------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGV 48
A+++YD+L+K +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGV
Sbjct: 2 ANDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGV 61
Query: 49 EFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
EFATRSI+V+ K +K+QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWL
Sbjct: 62 EFATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWL 121
Query: 109 KELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFT 168
KELR H DSNIVIMLVGNK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF
Sbjct: 122 KELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQ 181
Query: 169 EVLTQIYHVVSRKALDIGGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
+LT+I+ +VS KALD GD A P + + + D + K GCC
Sbjct: 182 NILTEIFRIVSSKALD-SGDSAQNPLSDRKVVEITKTQDPES--KQGCC 227
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 169/218 (77%), Gaps = 10/218 (4%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE KI+KA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF+N+ RWLKELR H D+NI IMLV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLV 125
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK DL+HL AV+T+DA FAE E ++ETSALE+ NVE AF +L IY +S+K
Sbjct: 126 GNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKP-- 183
Query: 185 IGGDP------AALPKGQTINVGGKDDVSAVKKVGCCN 216
+ D + +G+TINV D S K+ CC+
Sbjct: 184 VASDEGGAGAAGGVKEGKTINVAAGDANSEKKQ--CCS 219
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 159/200 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K + + P
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 180
Query: 196 QTINVGGKDDVSAVKKVGCC 215
+ + K+ CC
Sbjct: 181 NVVPIHVPPTTENKPKMQCC 200
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 170/222 (76%), Gaps = 11/222 (4%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++ + K++KA
Sbjct: 4 RPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN ERWLKELR H D NIVIMLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL AV+TE+ + +A+ F+ETSAL++ +VE AF +LT IY +V ++ L
Sbjct: 124 GNKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHL- 182
Query: 185 IGGDPAALP----------KGQTINVGGKDDVSAVKKVGCCN 216
GDP +G+TI+VG + K CC+
Sbjct: 183 ASGDPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKRKCCS 224
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/169 (78%), Positives = 153/169 (90%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 83 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/166 (80%), Positives = 152/166 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 167/212 (78%), Gaps = 7/212 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD + VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 58
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVG
Sbjct: 59 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 118
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD
Sbjct: 119 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 178
Query: 186 --GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G P + + + D A +K GCC
Sbjct: 179 GEGSGPVLGNDRKVLEISKSAD--AEQKKGCC 208
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DY++KVVLIGDS VGKS LL+RF+RNEFSLESK+TIGVEF TR++ V+ K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V+RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL +L V T+ A+ FAE+E+ F+ETSA+ES NVE AF VL++IY VVS+KAL
Sbjct: 129 KSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKALLAD 188
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ G+ LP G I + KDDV KK GCC++
Sbjct: 189 ENQGNSPLLP-GTKIKLADKDDVIGAKKAGCCSS 221
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 171/220 (77%), Gaps = 9/220 (4%)
Query: 4 YRAD--EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
Y+ D + DY++KVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF T+++ ++ K
Sbjct: 5 YKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKT 64
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVI
Sbjct: 65 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVI 124
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DL L AV TEDAK FAEREN FFMETSALE+ NVE AF VLT+IY ++S+K
Sbjct: 125 MLVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKK 184
Query: 182 AL------DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
L + GG+ ++L KG I V GK+ S K CC
Sbjct: 185 TLVANEEVESGGN-SSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 175/221 (79%), Gaps = 6/221 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV-ED 59
MAA DE YDYLYK+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+ + E
Sbjct: 1 MAA--KDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEG 58
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENVERWLKELR H D NI
Sbjct: 59 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNI 118
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VI+LVGNK+DL+HL AVS E+A FA RE+ F+ETSAL++ NVE AF ++L +IY +
Sbjct: 119 VILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQ 178
Query: 180 RKALDIGGDPAALP-KGQTINVGGKDDVSAVKKV--GCCNA 217
+K ++ P +GQ I++ + S +++ GCC+A
Sbjct: 179 KKQIEDNPQSTTQPGRGQKIHLDEERTDSQIRQSRRGCCSA 219
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 163/204 (79%), Gaps = 8/204 (3%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL AV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKGQ 196
T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + D AA +
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI---ADRAAHDESP 177
Query: 197 -----TINVGGKDDVSAVKKVGCC 215
I+V D K+ CC
Sbjct: 178 GNNVVDISVPPTTDGQKPSKLQCC 201
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 158/189 (83%), Gaps = 6/189 (3%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y + VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDT
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 71
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGNK+D
Sbjct: 72 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 131
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
LRHL AV T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K + DP
Sbjct: 132 LRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR---DP 188
Query: 190 AALPKGQTI 198
P+G TI
Sbjct: 189 ---PEGDTI 194
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%), Gaps = 2/203 (0%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQER 74
K VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQER
Sbjct: 13 KFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGNK+DLRHL
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR 132
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K + P
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPG 192
Query: 195 GQT--INVGGKDDVSAVKKVGCC 215
I+V D K+ CC
Sbjct: 193 NNVVDISVPPTTDGQKSNKLQCC 215
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 170/221 (76%), Gaps = 18/221 (8%)
Query: 6 ADEDYDY---LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+++YD + VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +
Sbjct: 2 ANDEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KA
Sbjct: 122 LVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKA 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAV--------KKVGCC 215
LD G GQ + +GG+ V + KK GCC
Sbjct: 182 LDQG------EGGQNV-LGGERKVLEISKSADEGQKKNGCC 215
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 152/167 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQ 173
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/215 (64%), Positives = 166/215 (77%), Gaps = 6/215 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+ E+YDYLYK+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ E K +KAQ
Sbjct: 5 SQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR + D NI IMLVG
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVG 124
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD- 184
NK+DLRHL VST++AK F+E+ F+ETSAL+S NVE AF +LTQIYH++SR +
Sbjct: 125 NKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRPSHGP 184
Query: 185 -IGGDPAALPKGQTINVGGKDDVSAVKKVGC--CN 216
I +P A G I+ +K GC CN
Sbjct: 185 IISDEPPA--PGVQIDPSEPSSTQGGQKSGCGMCN 217
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/223 (63%), Positives = 167/223 (74%), Gaps = 13/223 (5%)
Query: 6 ADEDYDYLYK------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR 53
A+++YD+L+K VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 61
Query: 54 SIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRG 113
SI+++ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + +FENV RWLKELR
Sbjct: 62 SIQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRD 121
Query: 114 HTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQ 173
H DSNIVIMLVGNK D RHL AVSTED KAFA F+ETSALE+ NV+ AF E+LT
Sbjct: 122 HADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTS 181
Query: 174 IYHVVSRKALDIGGDPA-ALPKGQTINVGGKDDVSAVKKVGCC 215
IY +VS K+L GD + Q N+ + S ++ GCC
Sbjct: 182 IYQIVSSKSLAEEGDVSKKFDPSQGNNISLSQEKSQEEQKGCC 224
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 154/176 (87%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R +E+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ VE ++V
Sbjct: 2 ARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +FENV RWLKELR H D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
L+GNK DL+HL V+TEDA+++AE+E F+ETSALE+ NV+ AF +L QIY ++
Sbjct: 122 LIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/170 (77%), Positives = 153/170 (90%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIW
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK
Sbjct: 63 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 122
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHV 177
+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +
Sbjct: 123 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/147 (90%), Positives = 141/147 (95%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRADEDYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAER 147
+MLVGNKADLRHL AVSTE+ FAER
Sbjct: 121 VMLVGNKADLRHLRAVSTEETTNFAER 147
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 164/216 (75%), Gaps = 13/216 (6%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YDY++KVV+IGDSGVGKS LL F RN +LESKSTIGVEFATRSIR EDK+VKAQIW
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIVIMLVGNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFM------ETSALESMNVENAFTEVLTQIYHVVSRK 181
ADLRHL AV+TEDAKAFAE E+TFFM ETSAL+ AF VLT IY + S+K
Sbjct: 125 ADLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSALKE-----AFKNVLTDIYRIASQK 179
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L L +G+ + + K CC+
Sbjct: 180 NLSANAAQTHLQGQGKVVQNDDVQEPQGKSKRSCCS 215
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 169/215 (78%), Gaps = 6/215 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DY++KVVLIGDS VGKS LLSRF+RNEFSLESK+TIGVEF TR+I V+ K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V+RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL +L V T+ A+ +AE+E F+ETSA+ES NVE AF VL++IY +VS+ AL
Sbjct: 129 KSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNALIAD 188
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ GG P L G IN+ KDDV K+ GCC++
Sbjct: 189 ENQGGTP--LLSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 159/191 (83%), Gaps = 7/191 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI++++K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ ++FENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK D RHL AV TED K FA F+ETSALE+ NV+ AF +LT IY +VS K+L
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAE 181
Query: 184 ---DIGG--DP 189
D+G DP
Sbjct: 182 EGADVGKKFDP 192
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 163/211 (77%), Gaps = 15/211 (7%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++K+V+IGD VGKS LLS F RNEFSL+SK TIGVEFATRSIR EDK+VKAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERY AITSAYYRGA GALLVYDVTRH TFE V RWLKELR HTDSNIVIMLVGNKADL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DIGGD 188
RHL AVSTEDAKAFAE+E+ FFMETSA + NV+ +F +LT IY ++S+K+L D D
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSLVADTYVD 189
Query: 189 P---AALPKGQTINVGGKDDVSAVKKVGCCN 216
A L G I+VG GCC+
Sbjct: 190 SLTVARLLGGTKISVGPG---------GCCS 211
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 160/199 (80%), Gaps = 1/199 (0%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRA 77
+IGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVS 137
ITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVGNK+DLRHL AV
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP-AALPKGQ 196
TE+AK+FA + F+ETSAL++ NVE AF +LT+IY +VS KALD G A + G
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGT 180
Query: 197 TINVGGKDDVSAVKKVGCC 215
I++ D A K CC
Sbjct: 181 NISLSKPADDDAAKGGKCC 199
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 152/169 (89%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVI LVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 166/202 (82%), Gaps = 4/202 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV-ED 59
MAA DE YDYLYK+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+ + E
Sbjct: 1 MAA--KDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEG 58
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENVERWLKELR H D NI
Sbjct: 59 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNI 118
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VI+LVGNK+DL+HL AVS E+A FA RE+ F+ETSAL++ NVE AF ++L +IY +
Sbjct: 119 VILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQ 178
Query: 180 RKALDIGGDPAALP-KGQTINV 200
+K ++ A P +GQ I+V
Sbjct: 179 KKQIEDNPQSTAQPGRGQKIHV 200
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 174/217 (80%), Gaps = 7/217 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S+++E K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL HL AVS ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RK
Sbjct: 124 GNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A + A LP +G+TI++ D + K CC+A
Sbjct: 184 AKEAAAASAPLPSQGKTISI---DSAAGNTKRACCSA 217
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 153/178 (85%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+++ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ ++FENV RWLKELR H DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
NK D RHL AV TED K FA F+ETSALE+ NV+ AF +LT IY +VS K+L
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL 179
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 160/202 (79%), Gaps = 4/202 (1%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFTRNEF+L++KSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG--GDPAALP 193
V TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD G G
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGD 201
Query: 194 KGQTINVGGKDDVSAVKKVGCC 215
+ +++ D K GCC
Sbjct: 202 RRPVVDINPSQDPET--KQGCC 221
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ ++ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL------D 184
L +V+TEDAK FAEREN FFMETSALE++NVENAF VLT+IY VVS+K L D
Sbjct: 135 GTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESD 194
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G+ ++L KG I V G++ K CC
Sbjct: 195 SSGN-SSLLKGTKIVVPGQEP-PPTSKATCC 223
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/207 (66%), Positives = 161/207 (77%), Gaps = 3/207 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
+ + K L DSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDT
Sbjct: 2 FHSIRKPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 61
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSNIVIMLVGNK+D
Sbjct: 62 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 121
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
LRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT+IY +VS KALD G
Sbjct: 122 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQ 181
Query: 190 AAL-PKGQTINVGGKDDVSAVKKVGCC 215
A L + I+V D + K GCC
Sbjct: 182 APLGDRRPVIDVSQTPDSES--KQGCC 206
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 166/214 (77%), Gaps = 8/214 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+ DY++KVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ ++ + VKAQIW
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---- 183
+DL L V TEDAK FAEREN FFMETSALES NVENAF VLT+IY +VS+K L
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G+ ++L KG I V G++ K CC
Sbjct: 193 EVDSSGN-SSLLKGTKIVVPGQEPAPPT-KASCC 224
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 170/215 (79%), Gaps = 9/215 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF+RNEFS+ESK+TIGVEF TR++ ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDAK FA+REN FFMETSAL+S NVE +F VLT+IY +VS+K L
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GGD ++L +G I V G++ S K GCC
Sbjct: 189 EEGESGGD-SSLLQGTKIVVAGEETESKGK--GCC 220
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 170/215 (79%), Gaps = 9/215 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF+RNEFS+ESK+TIGVEF TR++ ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDAK FA+REN FFMETSAL+S NVE +F VLT+IY +VS+K L
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GGD ++L +G I V G++ S K GCC
Sbjct: 189 EEGESGGD-SSLLQGTKIVVAGEETESKGK--GCC 220
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 170/209 (81%), Gaps = 3/209 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI++++ KI+KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL ++ DA +A++E F+ETSALE+ NVE AF ++L +IY+V +K D
Sbjct: 128 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKNDD 187
Query: 189 PAAL-PKGQTINVGGKDDVSAVKKVG-CC 215
++ P+G+ INV +D + KK CC
Sbjct: 188 NLSIQPRGKKINVDDDNDKNETKKKNKCC 216
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++K+VLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF T+++ ++ K VKAQI
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V +WL+ELR H D+NIVIML+GN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL L AV TEDAK FA++EN FFMETSALE+ NVE+AF VLT+IY V+S+KAL
Sbjct: 130 KSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN 189
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G ++L KG I V ++ VS + CC
Sbjct: 190 EQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCC 222
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 167/216 (77%), Gaps = 6/216 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ ++ K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL L AV TEDA+ FAEREN FFMETSALE+ NVE AF VLT IY ++S+K L
Sbjct: 129 KSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTAN 188
Query: 187 GD-----PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D + L KG I V G D SA +K GCC +
Sbjct: 189 TDTDSTGSSTLLKGTKIIVPGGPD-SAAQKGGCCGS 223
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 150/167 (89%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVI LVGNK+
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 121 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 166/214 (77%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIG SGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T+EN ERWLKELR H DSNIVI LVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGT 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+ LRHL AV T++A+AF+E+ N F+ TSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNFVDISVPPTTDGQNPNKLQCC 215
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 158/192 (82%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+ +SKSTIGVEFATRS+ V+ K+VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++ TF NV RWLKELR H DS+IV+MLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL AV T++AK FA F+ETSAL++ NVE AF ++LT IY +VS K+LD +
Sbjct: 126 DLKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE 185
Query: 189 PAALPKGQTINV 200
+G T+ V
Sbjct: 186 VIQPSRGTTVTV 197
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT-QIYHVVSRKALDI 185
K+DLRHL +V T++AK FAER F+ETSAL+S NVE AF +LT + H + + +D+
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTGDVLHPSNVEPIDV 184
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF RN+F+L+SK+TIGVEF TR++ ++ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP- 189
L AV EDAK FAEREN FFMETSALE++NVENAF VLT+IY VS+K L +P
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 ----AALPKGQTINVGGKDDVSAVKKVGCC 215
++L KG I V G++ S +K CC
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKAT-CC 223
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 160/206 (77%), Gaps = 12/206 (5%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGNK+DLRHL +V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKGQ 196
T++AK FAER F+ETSAL+S NVE AF +LT+IY +VS+K + DP P+G
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR---DP---PEGD 262
Query: 197 TINVGG------KDDVSAVKKVGCCN 216
I K V+A + CC
Sbjct: 263 VIRPSNVEPIDVKPTVTADVRKQCCQ 288
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV 57
+++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 168/217 (77%), Gaps = 9/217 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LLSRF RNEFSL+SK+TIGVEF T+++ ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL L V TEDAK FA+ EN FMETSALE+ NVE AF +LT+IY V+S+KAL
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D GG ++L KG I V G++ +A GCC +
Sbjct: 189 DETDSGG-SSSLLKGTKIVVPGQEPQAA--SSGCCRS 222
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 174/217 (80%), Gaps = 7/217 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGD+GVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S+++E K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL HL AVS ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RKAL
Sbjct: 124 GNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALA 183
Query: 185 IGGDPA---ALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A LP +G+TI++ D + K CC+A
Sbjct: 184 AKEAAAASRPLPSQGKTISI---DSAAGNTKRACCSA 217
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 160/202 (79%), Gaps = 2/202 (0%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V T++A+AFAE+ F+ETSAL+S VE AF +LT+IY +VS+K + P
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN 180
Query: 196 QTINVGGKDDVSAVK--KVGCC 215
+++ + + K+ CC
Sbjct: 181 NVVDISLPPTTDSQRGDKLPCC 202
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D+ DY++KVV+IGDS VGKS +LSRF +NEFSL+SKSTIGVEF TR+I +++K +K QI
Sbjct: 9 DQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RWL+ELRGH D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DLR + AV EDAK FA+RE FF ETSALE++NVE AF LT+IY +VSRKAL
Sbjct: 129 KCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTAN 188
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ G+ AAL + + V VKK CC
Sbjct: 189 EEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 168/218 (77%), Gaps = 11/218 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DY++KVVLIGDS VGKS LLSRF R+EF+LESKSTIGVEF TR+I V+ K +KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TFE+V RWL+ELR H D+N+VIM+VGN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL + A+S E+ + F+E+E +FMETSAL+S NVE AFT VLT+IY +VS+K+L
Sbjct: 125 KSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSL-AA 183
Query: 187 GDP--------AALPKGQTINVGGKDDVSAVKKVGCCN 216
DP +P G I + D+++AVKK CC+
Sbjct: 184 DDPNGGLANVMPPVPSGNKILL--DDELTAVKKRACCS 219
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 167/215 (77%), Gaps = 6/215 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DY++KVVLIGDS VGKS LLSRF+RNEFSLESK+TIGVEF TR+I V+ K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F++V RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL +L V T+ A+ +AE++ F+ETSA+ES NVE AF VL++IY VS+KAL
Sbjct: 129 KSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKALIAD 188
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ GG P L G I + KDDV KK GCC++
Sbjct: 189 ENQGGAP--LLPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 165/211 (78%), Gaps = 4/211 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +LSRF R+EFSL+SK+TIGVEF TR++ +E K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF++V RWL+ELR H D+NIVIMLVGNK DL
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDL 127
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL----DIG 186
+L AV TEDAK FA++E FF+ETSA+E+ NVE AF VLT+I+ +VS+K+L D G
Sbjct: 128 DNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQG 187
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
A G +I V G++ + KK CC +
Sbjct: 188 NGNHASLSGTSIVVPGQEQDTTTKKKSCCTS 218
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK D +H+ V T DA FA+ F+ETSAL++ NVE AF +LT+IY +VS KAL+
Sbjct: 122 NKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE- 180
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
G + P G + I + D A +K CC
Sbjct: 181 NGSSSQNPLGDRKVIEISKTQDADAKQK--CC 210
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 173/216 (80%), Gaps = 7/216 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++++ K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL HL A+S ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RK
Sbjct: 124 GNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + A+LP +G+ I++ D + K CC+
Sbjct: 184 AKEAAAATASLPSQGKIISI---DSTAGNTKRACCS 216
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK D +H+ A+ T+ FAE F+ETSAL++ NVE AF +LT+IY +VS KAL+
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE- 180
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
G+ P G + + + D A +K CC
Sbjct: 181 NGNSGQNPLGDRKVVEITKSQDADAKQK--CC 210
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 165/215 (76%), Gaps = 8/215 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++K+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVIML+GN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA---- 182
K DL L AV EDA+ FA+REN FFMETSALES NVE AF VLT+IY V+S+K
Sbjct: 128 KCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTAN 187
Query: 183 --LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
LD G + L KG I V G D A KK GCC
Sbjct: 188 EELDTNG-TSGLLKGTRIIVPGHDQAPA-KKGGCC 220
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 149/168 (88%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRA 77
LIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVS 137
ITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGNK+DLRHL AV
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
T++AKAFAER F+ETSAL+S NVE AF +LT+IY +VS+K + I
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVI 171
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 170/215 (79%), Gaps = 7/215 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF+RN+F+++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDA+ FA+REN FFMETSALES NVE AF +LT+IY ++S+K L
Sbjct: 129 KCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D GG + L KG I V +D + KK GCC
Sbjct: 189 DEADPGGG-SGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 165/210 (78%), Gaps = 3/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++K+VLIGDSGVGKS +LSR+ RNEFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 14 DYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWDTA 73
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR TF+++ RWL+ELRGH D NIVI+LVGNK+DL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKSDL 133
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG---G 187
A+STEDAK FAE E FF+ETSAL ++NVE AF+ VLT+I+++V++K L G G
Sbjct: 134 EDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGNG 193
Query: 188 DPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
DP +L + V G V K CCN+
Sbjct: 194 DPGSLAGKKIDIVPGPAQVVPTKSGMCCNS 223
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 167/218 (76%), Gaps = 11/218 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DY++KVVLIGDS VGKS LLSRF R+EF+LESKSTIGVEF TR+I V+ K +KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TFE+V RWL+ELR H D+N+VIM+VGN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL + +S E+ + F+E+E +FMETSAL+S NVE AFT VLT+IY +VS+K+L
Sbjct: 125 KSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSL-AA 183
Query: 187 GDP--------AALPKGQTINVGGKDDVSAVKKVGCCN 216
DP +P G I + D+++AVKK CC+
Sbjct: 184 DDPNGGLANVMPPVPSGNKILL--DDELTAVKKRACCS 219
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 166/213 (77%), Gaps = 3/213 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++K+VLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF T++I V+ K VKAQI
Sbjct: 9 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V +WL+ELR H D+NIVIMLVGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL L AV EDAK FA++EN FFMETSALE+ NVE+AF VLT+IY VVS+K+L
Sbjct: 129 KSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVAN 188
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
D G +L KG I + G++ CC+
Sbjct: 189 DEYGGNNSLLKGNKIVIPGQEPEMQATNSSCCS 221
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK D +H+ A+ T+ FAE F+ETSAL++ NVE AF +LT+IY +VS KAL+
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE- 180
Query: 186 GGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
G P G + + + D A +K CC
Sbjct: 181 NGTSGQNPLGDRKVVEITKSQDADAKQK--CC 210
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 165/210 (78%), Gaps = 6/210 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS GKS LL+RF RN+F+L+SK+TIGVEF TR++ ++ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP- 189
L AV EDAK FAEREN FFMETSALE++NVENAF VLT+IY VS+K L +P
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 ----AALPKGQTINVGGKDDVSAVKKVGCC 215
++L KG I V G++ S +K CC
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKAT-CC 223
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 172/216 (79%), Gaps = 7/216 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++++ K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL HL A+S ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RK
Sbjct: 124 GNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + A LP +G+TI++ D + K CC+
Sbjct: 184 AKEAAATAAPLPSQGKTISI---DSNAGNTKKACCS 216
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/177 (72%), Positives = 153/177 (86%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D +YDYL+KVVLIGDSGVGKSNLLSRFTRNEFSL+SKSTIGVEFAT+SI E K +KAQI
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELR H ++NIV+MLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
K+DL+ AV TE+A A AE+ N F+ETSAL++ V+ AF +LT+IY ++++K L
Sbjct: 125 KSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQL 181
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 167/217 (76%), Gaps = 9/217 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LLSRF RNEFSL+SK+TIGVEF T+++ ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K+DL L V TEDAK FA+ EN FMETSALE+ NVE AF +LT+IY V+S+KAL
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D GG ++L KG V G++ +A GCC +
Sbjct: 189 DETDSGG-SSSLLKGTKXVVPGQEPQAA--SSGCCRS 222
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 171/216 (79%), Gaps = 7/216 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++++ K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL HL A+S ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RKAL
Sbjct: 124 GNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKALA 183
Query: 185 IGGDPAAL----PKGQTINVGGKDDVSAVKKVGCCN 216
A +G+TI++ D + K CC+
Sbjct: 184 AKEAAATTATLPSQGKTISI---DSTAGNTKRACCS 216
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 161/215 (74%), Gaps = 8/215 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A +DY YL+KVVLIGDSGVGKSNLLSRF RNEF+ +SKSTIGVEFATRSI + K +K+Q
Sbjct: 2 ASDDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ TFE+VERWLKELR H D++IVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD- 184
NK+DL+ L AV TE+AK FA R FMETSAL+ NVE AF ++L +Y VVS KA++
Sbjct: 122 NKSDLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMEN 181
Query: 185 ----IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P A G++I V + CC
Sbjct: 182 ESNRVATGPGA---GKSITVAPTTTNAKPASGKCC 213
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 145/167 (86%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YD L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQIWD
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWD 100
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV+RWLKEL+ H DSNIVIMLVGNK+
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKS 160
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DLRHL AV TE+AK FA E F+ETSAL++ NVENAF +LT Y
Sbjct: 161 DLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 169/212 (79%), Gaps = 6/212 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++K+VLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF++V RWL+ELRGH D+NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL----DIG 186
+L AV EDA+ FA+RE FF+ETSALE++NVE+AF VLT IY ++S+KAL D G
Sbjct: 133 GNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQG 192
Query: 187 GDPAALPKGQTINVGGKD-DVSAVKKVGCCNA 217
+AL G + V G++ DVS K CC++
Sbjct: 193 NGNSALLTGTKLVVPGEEQDVSTNNKY-CCSS 223
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/232 (58%), Positives = 163/232 (70%), Gaps = 25/232 (10%)
Query: 9 DYDYLYKVVLIGDSGVGKS-------------------------NLLSRFTRNEFSLESK 43
++DYL+KVVLIGDSGVGKS NLLSRFTRNEF+LE+K
Sbjct: 6 NFDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETK 65
Query: 44 STIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN 103
STIGVEFATRSI V+ K +KAQIWDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ +
Sbjct: 66 STIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVD 125
Query: 104 VERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNV 163
V RWLKELR H DSNIVIMLVGNK+DL+HL AV T++AK FA F+ETSAL++ NV
Sbjct: 126 VTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNV 185
Query: 164 ENAFTEVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
E+AF +LT IY +VS K+L+ DP G +I V D + + CC
Sbjct: 186 ESAFQTILTDIYRIVSSKSLEQSSDPIKPSSGDSITVAPSVDSNTNQNSKCC 237
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 165/216 (76%), Gaps = 5/216 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL AV TEDAK FAE+E FF+ETSALES NVENAF VLT+I+ +++RK L
Sbjct: 130 NKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAA 189
Query: 186 G-----GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
G G+ A+L G+ I + G K CC+
Sbjct: 190 GENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCS 225
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVL+GDS VGK+ LL+RF +N+F+++SK+TIGVEF T+++ ++ K VKAQIWDTA
Sbjct: 13 DYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR +F+N+ +WL+ELRGH D NIV+ML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGNKCDL 132
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG--GD 188
L AV TEDA+ FA+REN FFMETSALES NVE AF +LT+IY +VS+K L D
Sbjct: 133 GTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTANDDAD 192
Query: 189 P---AALPKGQTINVGGKDDVSAVKKVGCC 215
P + L KG I V +D + KK GCC
Sbjct: 193 PSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 170/238 (71%), Gaps = 30/238 (12%)
Query: 6 ADEDYD-------YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE 58
A+++YD +L+KVVLIGDSG GKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+
Sbjct: 2 ANDEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD 61
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELR H DSN
Sbjct: 62 SKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSN 121
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT------ 172
IVIMLVGNK+DLRHL AV TE+AK FA N F+ETSAL++ NVE AF +LT
Sbjct: 122 IVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVG 181
Query: 173 --------------QIYHVVSRKALD-IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+IY +VS KAL+ G + + Q I++ D K GCC
Sbjct: 182 ISKRRSLTAILFFVEIYRIVSSKALEGESGGASVGERRQIIDIEKTQDTE--NKGGCC 237
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 165/209 (78%), Gaps = 3/209 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE-DKIVKAQIWD 68
+ + Y VVLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+++ DKI+KAQIWD
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 61 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 120
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL ++ DA FA++E F+ETSALE+ NVE AF ++L +IY+V +K D
Sbjct: 121 DLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSED 180
Query: 189 PAAL-PKGQTINVGGKDDVSAVK-KVGCC 215
+ P+G+ INV +D K K CC
Sbjct: 181 NVNIQPRGKKINVDNDNDEDEKKTKTKCC 209
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 166/217 (76%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+ + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 SSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL AV TEDAK FAE+E FF+ETSALE+ NVENAF VLT+I+++V++K L
Sbjct: 130 NKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVA 189
Query: 186 G-----GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G G+PA+L G+ I + G K CC +
Sbjct: 190 GEDQANGNPASL-TGKRITIPGPAQEIPAKSNMCCKS 225
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 161/227 (70%), Gaps = 27/227 (11%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 136 VSTEDAKAFAER----------------ENTF-----------FMETSALESMNVENAFT 168
V T++A+AFAE+ E F F+ETSAL+S NVE AF
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQ 186
Query: 169 EVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+LT+IY +VS+K + + P + + KV CC
Sbjct: 187 TILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCC 233
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 6/211 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF+RNEF+LESK+TIGVEF TR++ V+ K +KAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TFE+V RWL+EL+ H D+NIV+MLVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL +L AVS E+AK AERE FFMETSALE+ NV++AF VLT+IY +VS+K+L G
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEG 187
Query: 187 -GDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
G +P G T+ + K + K GCC
Sbjct: 188 AGGSQQIPIPGTTLLLSEKKE----SKTGCC 214
>gi|125563248|gb|EAZ08628.1| hypothetical protein OsI_30902 [Oryza sativa Indica Group]
Length = 164
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/146 (87%), Positives = 136/146 (93%)
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
RYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD+NIVIMLVGNKADLR
Sbjct: 19 HSRYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLR 78
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
HL AVS EDAK FAERE+TFFMETSALESMNVE+AFTEVLTQIY VVS+KALDIG DPAA
Sbjct: 79 HLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAA 138
Query: 192 LPKGQTINVGGKDDVSAVKKVGCCNA 217
P+GQTINVGGKDDVSAVKK GCC++
Sbjct: 139 PPRGQTINVGGKDDVSAVKKSGCCSS 164
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 6/211 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF+RNEF+LESK+TIGVEF TR++ V+ K +KAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TFE+V RWL+EL+ H D+NIV+MLVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL +L AVS E+AK AERE FFMETSALE+ NV++AF VLT+IY +VS+K+L G
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEG 187
Query: 187 -GDPAALP-KGQTINVGGKDDVSAVKKVGCC 215
G +P G T+ + K + K GCC
Sbjct: 188 AGGSQQVPIPGTTLLLSEKKE----SKTGCC 214
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 151/168 (89%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K VKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +++T+EN ERWLKEL+ H D+NIVIMLVGNK+DLRHL A
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
V T++A++FAE+ F+ETSAL+S NVE AF +L++IY +VS++ +
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQI 197
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 164/212 (77%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ +E K VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NIVIMLVGNK+DL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
AVSTEDAK FAE+EN FF+ETSAL++ NVENAF VLT+I+ + S+K ++ DP
Sbjct: 129 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKK--NMAADPR 186
Query: 191 ALPKGQTINVGGKD-----DVSAVKKVGCCNA 217
A G ++ GK + K CC++
Sbjct: 187 A--NGAAPSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK+DL AV TEDAK FA++E FF+ETSAL++ NVENAF VLT+I+++V++K L
Sbjct: 130 NKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVA 189
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
I G+PA+L + I G ++ A K CC+
Sbjct: 190 GEDQINGNPASLSGKKIIIPGPAQEIPAKSK--CCS 223
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 165/217 (76%), Gaps = 8/217 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R+ + DY++KVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR+++V+ + +KA
Sbjct: 10 RSPKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKA 69
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D N+VIML+
Sbjct: 70 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLI 129
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL- 183
GNK+DL L V TEDAK FA RE+ FFMETSALE+ NVENAF LT+IY VS+K L
Sbjct: 130 GNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLV 189
Query: 184 -----DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G+ ++L KG I V G++ K CC
Sbjct: 190 ANEETDSSGN-SSLLKGTKIIVPGQEPAPPA-KAACC 224
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 171/216 (79%), Gaps = 7/216 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++++ K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL HL A+S ++ KA AE+E FF+ET A+E++NVE AF ++T++Y +V+RK
Sbjct: 124 GNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + A LP +G+TI++ D + K CC+
Sbjct: 184 AKEAAATAAPLPSQGKTISI---DSNAGNTKKACCS 216
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 154/193 (79%), Gaps = 2/193 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDYDYL+KVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R+ K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--AL 183
NK DL HL AV ++AK F + F+ETSALE+ NVE AF E+L IY V S K L
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPL 187
Query: 184 DIGGDPAALPKGQ 196
G D ++ + Q
Sbjct: 188 RAGADTPSIEEQQ 200
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE YDYLYK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI E K++KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELR H D NIV++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLR+L V+ E+A AF+ERE ME SAL S NV+ AF +L++IY + S + L
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 187 G---DPAALPKG-QTINVGG-KDDVSA--VKKVGCC 215
+ A LP G Q + V + D+++ KK CC
Sbjct: 185 QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 154/193 (79%), Gaps = 2/193 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDYDYL+KVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R+ K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--AL 183
NK DL HL AV ++AK F + F+ETSALE+ NVE AF E+L IY V S K L
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPL 187
Query: 184 DIGGDPAALPKGQ 196
G D ++ + Q
Sbjct: 188 RAGADTPSIEEQQ 200
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 163/193 (84%), Gaps = 2/193 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI++++ KI+KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL ++ +A FA++E F+ETSALE+ NVE AF ++L +IY+V +K D
Sbjct: 128 DLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
Query: 189 PAAL-PKGQTINV 200
++ P+G+ INV
Sbjct: 188 SMSIQPRGKKINV 200
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 168/216 (77%), Gaps = 7/216 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S+++E K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS---RK 181
GNK+DL HL +VS + KA AE+E FF+ETSA+E++NVE AF ++ ++Y +V+
Sbjct: 124 GNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVNKKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + A LP +G+ I++ D + K CC+
Sbjct: 184 AKEAAAAAAPLPSQGKAISI---DSTAGNSKRACCS 216
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 166/215 (77%), Gaps = 9/215 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVVLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ ++ K VKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NIVIMLVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
+DL AVSTEDAK FAE+EN FF+ETSAL++ NVENAF VL++I+ + S+K ++
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKK--NMAA 182
Query: 188 DPAALPKGQTINVGGKDDV-----SAVKKVGCCNA 217
DP A G ++ GK V + K CC++
Sbjct: 183 DPKA--NGAAPSLAGKKVVVPGPAQEIPKSKCCSS 215
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 144/172 (83%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D+ YDYL+KVVL GDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ + +KAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+E WL ELRGH + +IVIMLVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
K DLRHL + TEDAK +AER FFMETSALES VENAF +L I+ V
Sbjct: 130 KCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAV 181
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 168/216 (77%), Gaps = 7/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF RNEFSL+SK+TIGVEF T+++ +++KI+KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV EDA+ A+REN FFMETSALES NVE F +LT+IY + ++K+L
Sbjct: 129 KCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTS 188
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
DIGG + L KG I V ++ + KK GCC A
Sbjct: 189 DDDIGG--SGLLKGSRIIVPNQEIYNGGKKGGCCFA 222
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 164/212 (77%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NIVIMLVGNK+DL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
AVSTEDAK FAE+EN FF+ETSAL++ NVENAF VL++I+ + S+K +I +P
Sbjct: 128 EDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKK--NIAAEPK 185
Query: 191 ALPKGQTINVGGKD-----DVSAVKKVGCCNA 217
A G ++ GK + K CC++
Sbjct: 186 A--NGSAPSLAGKKVLVPGPAQEIPKSKCCSS 215
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 164/212 (77%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NIVIMLVGNK+DL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
AVS+EDAK FAE+EN FF+ETSAL++ NVENAF VLT+I+ + S+K ++ DP
Sbjct: 129 EEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKK--NMAADPK 186
Query: 191 ALPKGQTINVGGKD-----DVSAVKKVGCCNA 217
A G ++ GK + K CC++
Sbjct: 187 A--NGAAPSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 143/157 (91%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
V T++A+AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 163/193 (84%), Gaps = 2/193 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI++++ KI+KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL ++ +A FA++E F+ETSALE+ NVE AF ++L +IY+V +K D
Sbjct: 128 DLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
Query: 189 PAAL-PKGQTINV 200
++ P+G+ INV
Sbjct: 188 SMSIQPRGKKINV 200
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 166/217 (76%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL + V TEDAK FAE+E FF+ETSALE+ NVE+AFT VLT+IY++V++K+L
Sbjct: 130 NKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA 189
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+ A+L GQ I + G K+ CC A
Sbjct: 190 DESQGNGNSASL-SGQKIIIPGPAQEIPAKRNMCCQA 225
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE YDYLYK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI + K++KAQI
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELR H D NIV++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL+HL AV+ E+A F+E+E ME SAL S NVE AF +L++IY + S + +
Sbjct: 125 KSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQ 184
Query: 187 GD--PAALPKG-QTINVGG----KDDVSAVKKVGCC 215
D LP G Q + V D +K CC
Sbjct: 185 HDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 167/217 (76%), Gaps = 7/217 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL AV TEDAK FA++E FF+ETSA+E+ NVE+AF VLT+I+++V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+PA+L G+ I V G V KK CC++
Sbjct: 188 DENQSNGNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 159/209 (76%), Gaps = 11/209 (5%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYDYLYK+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+I E K +KAQIW
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN--IVIMLVG 125
DTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR + D N I IMLVG
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVG 128
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DLRHL VST++AK FAE+ F+ETSAL+S NV+ AF +LTQI H +SR
Sbjct: 129 NKSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPT--- 185
Query: 186 GGDPAALPKGQTIN---VGGKDDVSAVKK 211
P P G N +G D+S+ K
Sbjct: 186 ---PIGAPSGHDDNSPSIGTPVDISSDTK 211
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 167/217 (76%), Gaps = 7/217 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL AV TEDAK FA++E FF+ETSA+E+ N+E+AF VLT+I+++V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+PA+L G+ I V G V KK CC++
Sbjct: 188 DDNQSNGNPASL-TGKKILVPGPGQVIPEKK-ACCSS 222
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 143/157 (91%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
V T++A+AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 165/211 (78%), Gaps = 5/211 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++K+VLIGDSGVGKS +LSR+ RNEFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 15 DYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR TF+++ RWL+ELR + D NIVI+LVGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG---- 186
A+S EDAK FAE+E FF+ETSAL ++NVE+AF+ VLT+I+++V++K+L G
Sbjct: 135 EDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVAGEGEG 194
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
GDP +L + V G V K CCN
Sbjct: 195 NGDPGSLAGKKIDIVPGPGQVIPTKNKLCCN 225
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 167/213 (78%), Gaps = 6/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF RNEFS++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALE+ NVE AF +LT+IY ++S+K+L
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 188
Query: 187 GDPA----ALPKGQTINVGGKDDVSAVKKVGCC 215
D A +L KG I + + + K+ GCC
Sbjct: 189 DDDADGNSSLLKGTRIIIPSEQESG--KRGGCC 219
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 166/218 (76%), Gaps = 9/218 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A RADE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFE V WLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIM 119
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTF-FMETSALESMNVENAFTEVLT-QIYHVVSR 180
L+GNK DL+H AV TEDA+ F R+ F+ETSAL++ NVE AF +L + ++S+
Sbjct: 120 LIGNKTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISK 179
Query: 181 KALDIGGDPAALPKG--QTINVGGKDDVSAVKKVGCCN 216
K+L ++ K + I VGG + A K CC+
Sbjct: 180 KSLSSDEPAPSVIKEAVKHIVVGGSE---ANTKKPCCS 214
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 169/209 (80%), Gaps = 3/209 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI++++ KI+KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL+HL ++ +A FA++E F+ETSALE+ NVE AF ++L +IY+V +K D
Sbjct: 128 DLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNED 187
Query: 189 PAAL-PKGQTI-NVGGKDDVSAVKKVGCC 215
++ P+G+ I D+ ++ KK CC
Sbjct: 188 SMSIQPRGKKINVDDDNDENNSKKKSKCC 216
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 163/213 (76%), Gaps = 14/213 (6%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYDV++H T+ENV RWLKELR H DSNIVIMLVGNK+DLRHL A
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 136 VSTEDAKAFAERE---------NTFFMETSALESMNVENAF----TEVLTQIYHVVSRKA 182
V TE+AK FA + N F+ETSAL++ NVE AF T++L +I+ +VS KA
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
L+ GD +A G V + KK GCC
Sbjct: 199 LE-SGDSSANQLGDRKVVEITKTPDSEKKQGCC 230
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 8/211 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR+++V+ + +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D N+VIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL------D 184
L V TEDAK FA RE+ FFMETSALE+ NVENAF LT+IY VS+K L D
Sbjct: 135 GTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETD 194
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G+ ++L KG I V G++ K CC
Sbjct: 195 SSGN-SSLLKGTKIIVPGQEPAPPA-KAACC 223
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NI+IMLVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DI 185
+DL AVSTEDAK FAE+EN FF+ETSAL++ NVE+AF VL++I+ + S+K + D
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDP 184
Query: 186 GGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+ AA P G+ + V G + K CC +
Sbjct: 185 KANGAAPPLAGKKVLVPGP--AQEIPKSKCCGS 215
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 160/210 (76%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ +E K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD-- 188
AV TEDAK FAE+E FF+ETSAL + NVEN+F ++TQIY+ V++K L GD
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 -PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P +L G+ I + G K CC +
Sbjct: 195 NPGSLA-GKKILIPGSGQEIPAKTSTCCTS 223
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 154/195 (78%), Gaps = 3/195 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WLKELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T +AK FA F ETSAL S NV+ AF E++T IY +VS+ +D+
Sbjct: 129 DLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 186 GGDPAALPKGQTINV 200
G + AA PKG TI++
Sbjct: 189 GNNAAAAPKGPTISL 203
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 163/214 (76%), Gaps = 8/214 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+ DY++KVVLIGDS VGKS LL+ F RNEF+L+SK+TIGVEF TR++ ++ + VKAQ
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQTR 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---- 183
+DL L V TEDAK FAEREN FFMETSALES N+ENAF VLT+IY +VS+K L
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G+ ++L KG I V G++ K CC
Sbjct: 193 EVDSSGN-SSLLKGTKIVVPGQEPAPPT-KASCC 224
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+DYDYL+KVVL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I +++KI+KAQIW
Sbjct: 6 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT TF NVE+WL ELR H D+NIVIMLVGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNK 125
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL L + A+ FA+ E+ F+ETSAL++ NVE AF L+ +Y+VVS+ +
Sbjct: 126 CDLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQA-VNA 184
Query: 188 DPAALPKGQTINVGGKDDVSAVKKVGCCN 216
+ + + ++I + +D K CC+
Sbjct: 185 EETSNKQNRSILISAAED-GFRPKSKCCS 212
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 156/195 (80%), Gaps = 3/195 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFATR+I+VEDK +KAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL EL+ + D N+ I L+GNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKS 129
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+A+ FA FF ETSAL S NV+ AF E++ QIY +V++ +D+G +
Sbjct: 130 DLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGEN 189
Query: 189 ---PAALPKGQTINV 200
+ PKG TI++
Sbjct: 190 AKGSSGAPKGPTISL 204
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 159/215 (73%), Gaps = 12/215 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATRS+ +E K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD-SNIVIMLVG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TF+N+++WLKELR H D SNI IMLVG
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DLRHL AV T++A +A+R + F+ETSAL+S NVE A +LT IY VS K
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTK---Y 182
Query: 186 GGDPAALPKGQ----TINVGGKDDVSAVKKVGCCN 216
G D +P G NV +DV K CCN
Sbjct: 183 GVDSKPVPYGGLGTIMTNVPSTEDV----KKKCCN 213
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/224 (61%), Positives = 159/224 (70%), Gaps = 15/224 (6%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+A +DYDYL+KVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+V+ K +KA
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKA 70
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDS-NIVIML 123
QIWDTAGQERYRAITSAYYRGA GALLVYDVTR TFE+ RWL+ELR H D +ML
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVML 130
Query: 124 VGNKADL---------RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
VGNK DL H AV DA A AERE F+ETSAL++ NV+ AF +LT+I
Sbjct: 131 VGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEI 190
Query: 175 YHVVSRKAL---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
Y VSRKAL G D A+ +GQ I V D + CC
Sbjct: 191 YRAVSRKALAASSAGDDAGAVGEGQAIQVSASDSAGLTTR--CC 232
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 154/199 (77%), Gaps = 6/199 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYDYL+KVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R+ +K+VKAQIW
Sbjct: 13 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+++ +F+N RWLKELR H DS+IV+MLVGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD--- 184
DL HL A+ E+A+ F + F+ETSALE+ NVE AF +L IY V S K
Sbjct: 133 CDLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQA 192
Query: 185 ---IGGDPAALPKGQTINV 200
GDP+ + + + + V
Sbjct: 193 AGAAAGDPSMVEQQERMRV 211
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT N+F+LESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+AK FA+ F ETSAL S NV+ AF E++T IY ++S+ +D+G D
Sbjct: 129 DLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSD 188
Query: 189 PAALPKGQTINVGG 202
G + N+ G
Sbjct: 189 NNGSGNGASNNIKG 202
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VL S + KSNLLSRFTRNEFSLESKSTIGVEFATRSI+ E KI+KAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+ H D+NIVIMLVGNK+DL+HL AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG- 195
+T+DA AFAE F+ETSAL++ NVE AF +L++IY + S+KAL+ G P
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAPNAT 201
Query: 196 QTINVGGKDDVSAVKKVGCC 215
QTI + D +K CC
Sbjct: 202 QTIVINPPADEGKTEKAKCC 221
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF +N+FS++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 95 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 154
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+N+ +WL+ELRGH D NIV+ML+GN
Sbjct: 155 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 214
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALES NVE AF +LT+IY ++S+K L
Sbjct: 215 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 274
Query: 187 --GDP---AALPKGQTINVGGKDDVSAVK--KVGCC 215
DP + L KG I V ++ + K K GCC
Sbjct: 275 DDADPSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 162/216 (75%), Gaps = 4/216 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 6 ANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L G
Sbjct: 66 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL + V TEDAK FAE+E FF+ETSALE+ NVE AF VLT+IY++V++K L
Sbjct: 126 NKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA 185
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ G +A GQ I V G K+ CC +
Sbjct: 186 DENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 221
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 156/210 (74%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK FA+ F ETSAL S NV+ AF E++T IY +VS+ +D+
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEY 188
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G + PKG TI++ K CC
Sbjct: 189 GNNAGQAPKGPTISLTPAPAKKNKKSDNCC 218
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 139/152 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSAL 158
K+DLRHL AV T++A+AFAE+ N F+ +L
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK+DL AVSTEDAK FAE+EN FF+ETSAL++ NVE+AF VLT+I+ + S+K +
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVS 183
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G A+P + + G ++ K CC++
Sbjct: 184 EPKSNGAAPAMPGTKVLVPGPAQEIPKSK---CCSS 216
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 163/222 (73%), Gaps = 15/222 (6%)
Query: 6 ADEDYDYLYK----------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI 55
A+++YD+L+K +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI
Sbjct: 2 ANDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSI 61
Query: 56 RVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHT 115
+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR H
Sbjct: 62 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHA 121
Query: 116 DSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
D NIVIMLVGNK D +H+ V T DA FA+ F+ETSAL++ NVE AF +LT+IY
Sbjct: 122 DKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIY 181
Query: 176 HVVSRKALDIGGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
+VS KAL+ G + P G + I + D A +K CC
Sbjct: 182 RIVSSKALE-NGSSSQNPLGDRKVIEISKTQDADAKQK--CC 220
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 165/215 (76%), Gaps = 7/215 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL + V TEDAK FAE+E FF+ETSALE+ NVE AF VLT+I+++V++K L
Sbjct: 130 NKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKNLAA 189
Query: 186 G-----GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G+ A+L Q I G ++ K+ CC
Sbjct: 190 GDNQGNGNAASLSGKQIIVPGTAQEIP--KRSMCC 222
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 164/215 (76%), Gaps = 7/215 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+ DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+LVGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNK 131
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---- 183
DL V TEDAK FA++E FF+ETSALES NVE AF VLT+I+++V++K L
Sbjct: 132 CDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGAD 191
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+PA+L G+ I V G V +K CC++
Sbjct: 192 NQTNGNPASL-GGKKIVVPGPAQVIP-EKSKCCSS 224
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 159/210 (75%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ +E K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD-- 188
AV TEDAK FAE+E FF+ETSAL + NVEN+F ++TQIY+ V++K L GD
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 -PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P +L G+ I + K CC +
Sbjct: 195 NPGSLA-GKKILIPASGQEIPAKTSTCCTS 223
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVLIGDSGVGKSNLLSRFTRN+F LE+KSTIGVEFATRS+ +E K +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD-SNIVIMLVG 125
WDTAGQERYRAITSAYYRG +GAL+VYD+ +H TFEN+ERWLKELR H D +I IMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
NK DLRHL AV T++A FAER F+ETSAL+S NVE A +LT IY VS K
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 161/215 (74%), Gaps = 4/215 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL + V TEDAK FAE+E FF+ETSALE+ NVE AF VLT+IY++V++K L
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ G +A GQ I V G K+ CC +
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 160/211 (75%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFA + +T +++ + F+ T+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAER 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SANDESPGNNVVDISVPPTTDGQRGSKLQCC 215
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK+DL AVSTEDAK FAE+EN FF+ETSAL++ NVE++F VLT+I+ + S+K +
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVS 183
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G A+P + + G ++ K CC++
Sbjct: 184 EPKSNGAAPAMPGTKVLVPGPAQEIPKSK---CCSS 216
>gi|224086265|ref|XP_002335212.1| predicted protein [Populus trichocarpa]
gi|222833087|gb|EEE71564.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 132/143 (92%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+N VIMLVGNKADLRHL
Sbjct: 1 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADLRHLR 60
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
AV+TEDAK FAERE+TFFMETSALESMNVENAFTEVLTQIY VVSRKALD+G D LPK
Sbjct: 61 AVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDDSTYLPK 120
Query: 195 GQTINVGGKDDVSAVKKVGCCNA 217
GQTINVG +DDVSAVKK GCC++
Sbjct: 121 GQTINVGSRDDVSAVKKAGCCSS 143
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 162/210 (77%), Gaps = 3/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGK+ LL+RF RNEFSL+SK+TIGVEF T+++ +++K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNKCDL 132
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP- 189
L AV EDA+ A+REN FFMETSALES NVE F +LT+IY + ++K+L D
Sbjct: 133 GSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASDDDN 192
Query: 190 --AALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ L KG I V ++ + KK GCC A
Sbjct: 193 WGSGLLKGSRIIVPNQEIDNGGKKGGCCFA 222
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 159/210 (75%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ +E K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD-- 188
AV TEDAK FAE+E FF+ETSAL + NVEN+F ++TQIY+ V++K L D
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSN 194
Query: 189 -PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P +L G+ I + G K CC +
Sbjct: 195 NPGSLA-GKKILIPGSGQEIPAKTSTCCTS 223
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 160/211 (75%), Gaps = 3/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+YDYL+K+VLIGDSGVGKSNLLSRFTR+ F+LESKSTIGVEFATR++ ++ K++KAQI
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDV +F N+E WLKEL H + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL +V TEDA+ FA+++ F+ETSAL+S NVE AF ++L IY +VS
Sbjct: 130 KCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNN 189
Query: 187 GD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
D +L Q I D+ S ++ CCN
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
Query: 27 SNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGA 86
SNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 87 VGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAE 146
VGALLVYD+++H T+ENV RWLKELR H D+NIVIMLVGNK+DLRHL AV TE+AK+FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 147 RENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP-AALPKGQTINVGGKDD 205
+ F+ETSAL++ NVE AF +LT+IY +VS KALD G A + G I++ D
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGTNISLSKPAD 187
Query: 206 VSAVKKVGCC 215
A K CC
Sbjct: 188 DDAAKGGKCC 197
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 144/170 (84%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDYDYL+KVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R+ K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
NK DL HL AV ++AK F + F+ETSALE+ NVE AF E+L IY
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIY 177
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+AK+FA + F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 PAALPKGQTINV-GGKDDVSAVKKVGCC 215
A P G TI++ + CC
Sbjct: 191 GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 164/212 (77%), Gaps = 5/212 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++K+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ + +K VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D +I+IML+GN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV EDAK FA+REN FFMETSALE+ NVE AF +LT+IY ++S++ L
Sbjct: 128 KCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGN 187
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D + + KG I V ++ S +K GCC
Sbjct: 188 DESNENSGAFKGTRILVPSQEQNS--EKKGCC 217
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 163/213 (76%), Gaps = 7/213 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ +E K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---DIGG 187
AV TEDAK FAE+E FF+ETSAL + NVEN+F ++T+IY+ V++K L + G
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVENQG 194
Query: 188 D---PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
D P +L + + G D+ A K CC++
Sbjct: 195 DSNNPGSLAGKKIVIPGSGQDIPA-KTSTCCSS 226
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/184 (67%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D+ YDYL+K+VL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I +++KI+KAQI
Sbjct: 6 DDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDVT T++N+E+WL ELR H D++IVIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL HL A+ FAE+E F+ETSAL + NVE+AF + L ++Y VVS+ L +
Sbjct: 126 KCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSK--LKMA 183
Query: 187 GDPA 190
P+
Sbjct: 184 CTPS 187
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 165/217 (76%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF+RNEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL + V TEDAK FAE+E FF+ETSAL++ NVE +F VLT+IY+++++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAA 189
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+ A+L GQ I + G K CC +
Sbjct: 190 DESQGNGNSASL-LGQKIVIPGPGQEVPAKSSMCCQS 225
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 153/173 (88%), Gaps = 1/173 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI++++ KI+KAQIWD
Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
DL+HL ++ DA +A++E F+ETSALE+ NVE AF ++L +IY+V +K
Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 150/177 (84%), Gaps = 1/177 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ R D YDYLYK+VLIGDSGVGKS+LLSRFTRNEF +ESKSTIGVEFATRSI+VE K
Sbjct: 1 MASGRYDH-YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQ+WDTAGQERYRAITSAYYRGAVGA+LVYD+T+ TF++VERWL E+R H D IV
Sbjct: 60 IIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIV 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHV 177
+MLVGNK DL+HL AV+++DAK + + F+E SAL++ NVE AF + +T+++HV
Sbjct: 120 VMLVGNKCDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHV 176
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K +KAQ
Sbjct: 10 ANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK+DL + V TEDAK FAE+E FF+ETSALE+ NVE AF VLT+I++++++K L
Sbjct: 130 NKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAA 189
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ G D +A G+ I V G K+ CC
Sbjct: 190 SDNQGNDNSASLSGKKIIVPGPAQ-EIPKRSMCC 222
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 164/217 (75%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF+RNEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL + V TEDAK FAE+E FF+ETSAL++ NVE +F VLT+IY+ V++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAA 189
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+ A+L GQ I + G K CC +
Sbjct: 190 DESQGNGNSASL-LGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 164/215 (76%), Gaps = 7/215 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF RN+FS++SK+TIGVEF TR++ +E K VKAQ
Sbjct: 9 ANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQ 68
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVI+L+G
Sbjct: 69 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIG 128
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL AV TEDAK FAE+E FF+ETSAL++ NVE AF VLT+I+++V++K L
Sbjct: 129 NKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAA 188
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G+ A+L + I G ++ KK CC
Sbjct: 189 DENQGNGNSASLSGKKIIVPGPAQEIP--KKSMCC 221
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 145/172 (84%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ + +KAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+E WL ELR + + ++V+MLVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
K DLRHL V TEDAK +AER FFMETSALES VENAF +L I+ V
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAV 181
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 12/216 (5%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV--EDKIVKAQ 65
+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEF ESKSTIGVEFATR I V E K VKAQ
Sbjct: 6 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +++NV++WLKELR H DSNIVI LVG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA--- 182
NK DL+HL +V E A F+ E F+ETSA ES NV+ AF + LT +YH++S+K+
Sbjct: 126 NKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSCSS 185
Query: 183 --LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
+D A + + + I+ K + S CCN
Sbjct: 186 AEVDDKNGGAGIIEVKAISESSKKNPSK-----CCN 216
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 155/189 (82%), Gaps = 2/189 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF +N+FS++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+N+ +WL+ELRGH D NIV+ML+GN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALES NVE AF +LT+IY ++S+K L
Sbjct: 130 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 189
Query: 187 GDPAALPKG 195
D A P G
Sbjct: 190 DD--ADPSG 196
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 164/215 (76%), Gaps = 7/215 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL AV TED FA++E FF+ETSAL++ NVE+AF +LT+I+++V++K L
Sbjct: 130 NKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIA 189
Query: 186 G-----GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G G+PA+L + I G ++ + K CC
Sbjct: 190 GENQSNGNPASLSGKKIIIPGPAQEIPSKSK--CC 222
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 7/213 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++K+VLIGDS VGKS L+RF RNEF+ +SK+TIGVEF T+++ +++K VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D +I+IML+GN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDA+ FA+REN FFMETSALE+ NVE AF VLT+IY ++S+K L
Sbjct: 128 KCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTLAGN 187
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G+P KG I V + S +K GCC
Sbjct: 188 DKSDGNPGVF-KGTRILVPSQAQNS--EKKGCC 217
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL AVSTEDAK FAE+EN FF+ETSAL++ NVE+AF VLT+I+ + S+K ++
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKK--NM 181
Query: 186 GGDP-----AALPKGQTINVGGKDDVSAVKKVGCCNA 217
+P A G + V G + K CC++
Sbjct: 182 VSEPKSNGVAPAMAGTKVLVPGP--AQEIPKSKCCSS 216
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 160/215 (74%), Gaps = 4/215 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL + V T DAK FAE+E FF+ETSALE+ NVE AF VLT+IY++V++K L
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 184 -DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ G +A GQ I V G K+ CC +
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 164/217 (75%), Gaps = 7/217 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGK+ +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL AV TEDAK FA++E FF+ETSA+E+ +E+AF VLT+I+++V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+PA+L G+ I V G V KK CC++
Sbjct: 188 DENQSNSNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H DSNIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV TE+AK FA+ N F+E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 186 -GGDPAALPKGQTINVGGKDDVSAVKKV-GCC 215
G + G TI++ K GCC
Sbjct: 191 GGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
++YD+L+KVV+IGDSGVGK+N+L RFTR+EF+L+SKSTIGVEFATR++ +++KI+KAQIW
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALL+YDVT +++N+ RWL+EL+ H DSNIV+MLVGNK
Sbjct: 63 DTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNK 122
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL+HL AV TE+AK FA + F+ETSAL+ +V AF +LT+IYH VS A ++
Sbjct: 123 CDLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVS-AAENVHA 181
Query: 188 ---DPAALPKGQTINVGGKDDVSAVKKVGCC 215
D +G TI++ + S K CC
Sbjct: 182 NLEDSRKPQQGTTISLTPQPGDSDKKSSSCC 212
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 156/211 (73%), Gaps = 4/211 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL EL+ + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F ETSAL S NV+ AF E++T IY +VS+ +D+G
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 P---AALPKGQTINV-GGKDDVSAVKKVGCC 215
A PKG TI++ ++ CC
Sbjct: 189 NTSGATAPKGPTISLTPAPNENKKSSSNNCC 219
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+R+ R+EFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TF+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG---- 186
A+ TEDAK FAE+E FF+ETSA + NVE+AF+ VLT+I+++V++K+L
Sbjct: 135 VDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQE 194
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+P +L + V G V K CCN+
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 3/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ ++ K++KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR H + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL V TEDA+ FA+++ F+ETSAL+S NVE AF ++L IY++VS
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNN 189
Query: 187 GD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
D +L Q I D+ S ++ CCN
Sbjct: 190 VDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 148/177 (83%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN + WL ELRG+ D+N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
DL H+ AV T++AK FA+ F ETSAL+S NV+ AF E++T IY +VS+ +D+
Sbjct: 129 DLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSKHQVDM 185
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT N+F++ESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV T++AK FA+ F ETSAL+S NV+ AF E++T IY +VS+ +D+G
Sbjct: 129 DLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDA 188
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKV-GCC 215
PKG TI++ + + K CC
Sbjct: 189 NTQGNAPKGPTISLTPAPNENKKKSANNCC 218
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 158/213 (74%), Gaps = 9/213 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+DYDYL+KVVLIGDSGVGK+NLL RFTRNEF+LESKSTIGVEFATRSI+V++K++KAQIW
Sbjct: 3 DDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIW 62
Query: 68 DTAGQERYRAITS-----AYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
DT Y TS +YYRGAVGALL YD+++H TFE+V RWLKELR H DSNIVIM
Sbjct: 63 DTG---NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIM 119
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DLRHL AV T++AK FA F+ETSAL++ NVE +F +LT+I+ +VS KA
Sbjct: 120 LVGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKA 179
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
L+ + GQTI V D GCC
Sbjct: 180 LETSNNAIKPTGGQTILVSQSPD-EPKPSGGCC 211
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 167/217 (76%), Gaps = 8/217 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+NV++WL ELR S++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+D+ HL V +D K AE E +FMETSALE++NVE AF +++T+I+ + S+K+L+
Sbjct: 126 KSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAK 185
Query: 187 GDPA------ALPKGQTINVGGKDDVSAVKKVG-CCN 216
+ ALP G+ + + D+VSA K+ CC+
Sbjct: 186 KNETTISTIKALPVGKEV-INIDDEVSATKQASYCCS 221
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 160/211 (75%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQ 65
+E++DYL+K+VL+GDSGVGKSNLL RFTRNEF L+SKSTIGVEFAT++I +ED K+VKAQ
Sbjct: 6 EEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERY+AIT+AYYRGA GALLVYD+T+ + EN+ RWL+ELR H D+ +V+MLVG
Sbjct: 66 IWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLVG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-D 184
NK DLRHL V E K AE E F+ETSAL+S NVE AFT+++ +IY ++ +KAL +
Sbjct: 126 NKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKALVN 185
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
AL + T+ + + KK CC
Sbjct: 186 ESTQSFALKQDNTVVIRDPSAAKSSKKKKCC 216
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 164/217 (75%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A++ DY++KVVLIGDS VGKS +L+RF+ NEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL + V TEDAK FAE+E FF+ETSAL++ NVE +F VLT+IY++V++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAA 189
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+ A+L GQ I + G K CC +
Sbjct: 190 DESQGNGNSASL-LGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 4/211 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE+A+ FA N F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 187 GDPAALPKGQTINV--GGKDDVSAVKKVGCC 215
G A G TI++ K+ S+ CC
Sbjct: 191 GGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 150/178 (84%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+ + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 10 SSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELRGH D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
NK DL AV TEDAK FAE+E FF+ETSALE+ NVENAF VLT+I+++V++K L
Sbjct: 130 NKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNL 187
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 153/179 (85%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D+D+DY++K+VLIGDSGVGKSNLLSRFT++EF+ + K+TIGVEFATRSI ++K++KA
Sbjct: 3 RNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERY AITSAYYRGAVGALL+YD+T+H +F N+++WL E+R H + +IV+MLV
Sbjct: 63 QIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
GNK+DL+HL V EDA AFAE+ N F+ETSAL++ NVE F ++T+IY +++++++
Sbjct: 123 GNKSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSM 181
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 4/211 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE+A+ FA N F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 187 GDPAALPKGQTINV--GGKDDVSAVKKVGCC 215
G A G TI++ K+ S+ CC
Sbjct: 191 GGLKAPSNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 155/191 (81%), Gaps = 2/191 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF+RN+F+++SK+TIGVEF T+++ ++ K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELRGH D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALES NVE AF +LT+IY ++ +K L
Sbjct: 129 KCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTAN 188
Query: 187 GDPAALPKGQT 197
D P G +
Sbjct: 189 DDTD--PSGSS 197
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 157/210 (74%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + T+E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--G 186
DL HL AV TE+A+ FA N F E SAL S NV+ +F ++L IY ++S+ LD G
Sbjct: 131 DLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDG 190
Query: 187 GDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
G G TI++ + + CC
Sbjct: 191 GSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 152/202 (75%), Gaps = 5/202 (2%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD T+ TF N ERWLKELR H D NIVIMLVGNK D +H+ A
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
+ T+ FAE F+ETSAL++ NVE AF +LT+IY +VS KAL+ G P G
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE-NGTSGQNPLG 189
Query: 196 --QTINVGGKDDVSAVKKVGCC 215
+ + + D A +K CC
Sbjct: 190 DRKVVEITKSQDADAKQK--CC 209
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ ++ K++KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR H + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DLRHL V TEDA+ FA+++ F+ETSAL+S NVE AF ++L IY +VS
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNN 189
Query: 187 GD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
D +L Q I D+ S ++ CCN
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 147/189 (77%), Gaps = 1/189 (0%)
Query: 28 NLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAV 87
NLLSRFTRNEF+LESKSTIGVEFATRSI V+ K VKAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 88 GALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAER 147
GALLVYD+ +H T+ENV RWLKELR H D+NIVIMLVGNK+DL+HL AVST++AK FA
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 148 ENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGK-DDV 206
F+ETSAL++ NVE+AF +LT IY +VS K+L+ GD G+TI V DD
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGETILVAPTADDG 196
Query: 207 SAVKKVGCC 215
A CC
Sbjct: 197 GAKSGSKCC 205
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+L+S+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA + F E SAL S NV+ +F ++L IY ++S+ L+
Sbjct: 131 DLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQ 190
Query: 189 PAALP-KGQTINVGG-KDDVSAVKKVGCC 215
P+A P G TI++ + + CC
Sbjct: 191 PSAKPSSGATISLTPVPQEKKSKNNANCC 219
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKELR H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+AK+FA N F E SAL S NV+ +F ++L IY ++S+ LD D
Sbjct: 131 DLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDT-ND 189
Query: 189 PAALPK---GQTINV-GGKDDVSAVKKVGCC 215
K G TI++ + + K CC
Sbjct: 190 TVGSSKPSGGPTISLTPAPQEKRSGKNSNCC 220
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF LESKSTIGVEFATR+I V+ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA+ F ETSAL S NV+ AF E++T IY ++S+ +D+G D
Sbjct: 129 DLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVD 188
Query: 189 ----PAALPKGQTINV-GGKDDVSAVKKVGCC 215
PKG TI++ ++ CC
Sbjct: 189 NNNNTLNAPKGPTISLTPAPNEKKKSSSNNCC 220
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 165/213 (77%), Gaps = 8/213 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF RNEFS++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER A+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 126
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALE+ NVE AF +LT+IY ++S+K+L
Sbjct: 127 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 186
Query: 187 GDPA----ALPKGQTINVGGKDDVSAVKKVGCC 215
D A +L KG I + + + K+ GCC
Sbjct: 187 DDDADGNSSLLKGTRIIIPSEQESG--KRGGCC 217
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 164/219 (74%), Gaps = 11/219 (5%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
+Y+ ++ DYL+KVVLIGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ ++ K +
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEL 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RW EL+ H+D+N+V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL H+ V+ E+A A AE+ +FMETSALE++NV AF VL +I+ +VS+KA
Sbjct: 122 LVGNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKA 181
Query: 183 LDIGGDPAALPKGQTI-----NVGGKDDVSAVKKVGCCN 216
L DP KG T+ + G DD + + CC+
Sbjct: 182 LT--ADP---NKGNTVVASGQRLAGSDDTTP-RTTACCS 214
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 157/210 (74%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YL+K+VL+G+S VGKSNLLSRFTR+EF++ESK+TIGVEFATR+I V+ K +KAQIWD
Sbjct: 11 DYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRA+T+AYYRGAVGALLVYD++ ++E RWL EL+ H D+NIV+ LVGNK+
Sbjct: 71 TAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK+FA + F E SAL S NVE AF +++ IY +VS+ D+
Sbjct: 131 DLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFDMNDY 190
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G D + GQTI + S +KK CC
Sbjct: 191 GNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 155/208 (74%), Gaps = 1/208 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGD GVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+AK FA + F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 PAALPKGQTINV-GGKDDVSAVKKVGCC 215
A P G TI++ + CC
Sbjct: 191 GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 143/168 (85%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR++ ++ + VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
K+DL L AV TEDAK FAEREN FFMETS LES NVE+AF VLT+I
Sbjct: 129 KSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+R+ R+EFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TF+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG---- 186
A+ TEDA+ FAE+E FF+ETSA + NVE+AF+ VL++I+++V++K+L
Sbjct: 135 VDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASEDQE 194
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+P +L + V G V K CCN+
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/163 (74%), Positives = 146/163 (89%), Gaps = 1/163 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE-DKIVKAQIWD 68
YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+++ DKI+KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+E+WLKELR + DSNIVI+LVGNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL 171
DL+HL ++ DA FA++E F+ETSALE+ NVE AF ++L
Sbjct: 128 DLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 156/217 (71%), Gaps = 10/217 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA+ F ETSAL S NV+ AF E++T IY +VS+ +D+
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLDNS 188
Query: 189 --------PAALPKGQTINVGGKDDVSAVKK--VGCC 215
P+G TI++ + + K CC
Sbjct: 189 NGQGAAGAGNGAPRGPTISLTPTPNEKSKKNSSSNCC 225
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/160 (75%), Positives = 143/160 (89%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
L+ VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K VKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+ +++T+EN ERWL EL+ H D+NI+IMLVGNK+DLRH
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
L AV T++A++FAE+ F+ETSAL+S NVE AF +L+
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 159/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-G 187
DL HL AV T++AK FA N F E SAL S NV+ +F ++L IY ++S+ LD G
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTSDG 190
Query: 188 DPAALPK-GQTINV-GGKDDVSAVKKVGCC 215
A P G TI++ + + CC
Sbjct: 191 ANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 152/192 (79%), Gaps = 4/192 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 75
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+GNK DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 135
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL----DIG 186
V TEDAK FAE+E FF+ETSALE+ NVE AF VLT+IY++V++K L + G
Sbjct: 136 ESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 195
Query: 187 GDPAALPKGQTI 198
+A GQ I
Sbjct: 196 NGNSASLSGQKI 207
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 149/186 (80%), Gaps = 3/186 (1%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+NEF+LESKSTIGVEFATRSI+ ++K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+++H T+ENV++WLKELR H D +IVIMLVGNK+DLRHL
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPKG 195
V TE+AK FA+R N F+ETSAL S NVE AF +L +IY V R +GG A
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVRT---LGGGAADDKDN 177
Query: 196 QTINVG 201
+ + G
Sbjct: 178 KNVETG 183
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 139/160 (86%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI V+ K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+++H T+ NV RWLKELR H DSNIVIMLVGNK+DL+HL A
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
V TE+AK F+ F+ETSAL++ NVE+AF +LT +Y
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVY 160
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/190 (64%), Positives = 151/190 (79%), Gaps = 5/190 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK FA N F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEG 190
Query: 186 --GGDPAALP 193
G P+ P
Sbjct: 191 SNGNKPSGGP 200
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 151/197 (76%), Gaps = 5/197 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I +E K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F ETSAL S NV+ AF E++T IY +VS+ +D+G
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 -----PAALPKGQTINV 200
PKG TI++
Sbjct: 189 GNNDINNGTPKGPTISL 205
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 157/211 (74%), Gaps = 6/211 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ SKSTIGVEFATR+I VE K VKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK +A+ F ETSAL + NV+ AF E++T IY +VS+ +D+
Sbjct: 129 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEK 188
Query: 186 -GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
GG +P+G TI++ + K CC
Sbjct: 189 SGG--GTMPRGPTISLTPASNEKTKKSNNCC 217
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 162/216 (75%), Gaps = 5/216 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
+Y+ ++ DYL+KVVLIGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ ++ K V
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+V+D+TR TFENV RWL EL+ H+DS++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL H+ V+ E+A A AE FMETSALES+NV AF VL +I+ +VS+KA
Sbjct: 122 LVGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKA 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L D + GQ + G DD + + GCC+
Sbjct: 182 LTADPNKSNTVVASGQRL--AGGDDTTP-RTGGCCS 214
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 139/160 (86%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI V+ K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLVYD+++H T+ NV RWLKELR H DSNIVIMLVGNK+DL+HL A
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
V TE+AK F+ F+ETSAL++ NVE+AF +LT +Y
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVY 160
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 160/208 (76%), Gaps = 2/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
+DYL+K V++GDSGVGK+N+LSRFTRNEFS++SKSTIGV+FAT+ I V++K+VKAQ+WDT
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQ+RYRAIT+AYYRGAVGALLVYD+TR T++N+ RWLKELR D+N VIMLVGNK+D
Sbjct: 67 AGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSD 126
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L+H+ AVSTE+A AF+ F+ETSAL+S NV+ AF V+ I+ +VS + L+ +
Sbjct: 127 LKHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENE 186
Query: 190 AALP-KGQTINVGGKDDVSAVKKVGCCN 216
+ P G I + + K GCC+
Sbjct: 187 VSAPGAGAPIKIDNSTETQTTKG-GCCS 213
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/156 (76%), Positives = 140/156 (89%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V++K VKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+ +++T+EN ERWL EL+ H D+NIVIMLVGNK+DLRHL AV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
T++A++FAER F+ETSAL+S NVE AF +L+
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ SKSTIGVEFATR+I VE K VKAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 129
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK +A+ F ETSAL + NV+ AF E++T IY +VS+ +D+ +
Sbjct: 130 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEN 189
Query: 189 PAA--LPKGQTINVGGKDDVSAVKKV-GCC 215
+ +P+G TI++ + KK CC
Sbjct: 190 NGSGTVPRGPTISLAPAPSEKSKKKTNNCC 219
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 160/207 (77%), Gaps = 4/207 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
D+L K+VLIGDSGVGK+NLLSRF R++F+ +SKSTIGVEFAT+++ +E K VKAQIWDTA
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTA 66
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGA+GALL+YD+T +TF ++ RWL+ELR + DSNIV+MLVGNK+DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDL 126
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ L AVSTED F+++EN F+ETSA + NV+ AFT ++T+I H +S++ + PA
Sbjct: 127 QELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDSPA 186
Query: 191 AL-P-KGQTINVGGKDDVSAVKKVGCC 215
+ P KG TI DD KK CC
Sbjct: 187 KVGPNKGVTITSTTADDKK--KKNTCC 211
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 160/224 (71%), Gaps = 15/224 (6%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+A +DYDYL+KVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+V+ K +KA
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKA 70
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDS-NIVIML 123
QIWDTAGQERYRAITSAYYRGA GALLVYDVTR TFE+ RWL+ELR H D +ML
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVML 130
Query: 124 VGNKADL---------RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
VGNK DL H AV DA A AERE F+ETSAL++ NV+ AF +LT+I
Sbjct: 131 VGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEI 190
Query: 175 YHVVSRKAL---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
Y VSRKAL G D AA+ +GQ I V D + CC
Sbjct: 191 YRAVSRKALAASSAGDDAAAVGEGQAIQVSAGDSAGLTTR--CC 232
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 145/173 (83%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+KVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ ++ K++KAQI
Sbjct: 21 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 80
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR H + NIV+MLVGN
Sbjct: 81 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 140
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
K DLRHL V TEDA+ FA+++ F+ETSAL+S NVE AF ++L IY +VS
Sbjct: 141 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 149/185 (80%), Gaps = 15/185 (8%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+DYDYL+K+VLIGDSGVGKSN+LSRFTRNEFS+ESKSTIGVEFATRSI +E K+VKAQIW
Sbjct: 6 DDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRH---------------VTFENVERWLKELR 112
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF +VE+WL ELR
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELR 125
Query: 113 GHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
H DS IVIML GNK DL+HL +V+T+DA+ +A +E+ F+ETSAL S+N++ AF +VL+
Sbjct: 126 DHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLS 185
Query: 173 QIYHV 177
I+ V
Sbjct: 186 VIHEV 190
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 134/141 (95%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAER 147
K+DLRHL AV T++A+AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 152/199 (76%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ +E K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -----GDPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 SANGNANGASAPNGPTISL 207
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 134/141 (95%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAER 147
K+DLRHL AV T++A+AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F ETSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 ------PAALPKGQTINV--GGKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 134/141 (95%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAER 147
K+DLRHL AV T++A+AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEQ 145
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 158/211 (74%), Gaps = 4/211 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGA+GAL+VYD+ + ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV T++A+ FA N F E SAL S NV+ +F ++L IY ++S+ LD
Sbjct: 131 DLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 187 GDPAALPKGQTINV--GGKDDVSAVKKVGCC 215
G A G TI++ K+ GCC
Sbjct: 191 GGLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 166/217 (76%), Gaps = 7/217 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ ++DK++KAQIW
Sbjct: 3 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIML+GNK
Sbjct: 63 DTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNK 122
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG- 186
ADL L AV TEDA FAE + FF ETSAL NV+ AF +L +IY V+ +K+L+ G
Sbjct: 123 ADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECGN 182
Query: 187 GDPAALP----KGQTIN-VGGKD-DVSAVKKVGCCNA 217
G+P A +G I+ + G D ++S +KK+ C+
Sbjct: 183 GNPHAADAITLRGSKIDGISGTDLEISEMKKLSACSC 219
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F +TSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 ------PAALPKGQTINV--GGKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA N F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNAD 190
Query: 189 PAALP-KGQTINV-GGKDDVSAVKKVGCC 215
G TI++ + ++ CC
Sbjct: 191 SNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 152/199 (76%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -----GDPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 SANGNANGASAPNGPTISL 207
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+D+ Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++R+++ +KAQ
Sbjct: 3 SDDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL +L V T++A+ FAE++ FMETSAL+S NVE AF+EVLT I+ V+ + +
Sbjct: 123 NKSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTR 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G A +G + +K GCC +
Sbjct: 183 GSISAVTLSSP---IGPSSEAQEERK-GCCRS 210
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 154/210 (73%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT NEF+++SKSTIGVEFATR+I V+ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--G 186
DL HL AV TE+AK FA F ETSAL S NV+ AF E++T I+ VS+ +++
Sbjct: 129 DLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNA 188
Query: 187 GDPAALPKGQTINV-GGKDDVSAVKKVGCC 215
P A P G TI++ ++ CC
Sbjct: 189 NKPGAGPNGPTISLTPAPNEKKKSSSNNCC 218
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++A+ FA F ETSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 129 DLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNGS 188
Query: 189 PA------ALPKGQTINV--GGKDDVSAVKKVGCC 215
+ PKG TI++ K+D K CC
Sbjct: 189 GSNNVGSNGGPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 151/199 (75%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -----GDPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 SANGNANGASAPNGPTISL 207
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 156/215 (72%), Gaps = 9/215 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F TSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 ------PAALPKGQTINV--GGKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 166/226 (73%), Gaps = 10/226 (4%)
Query: 1 MAAYR--ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE 58
MA ++ ADE DY++K+V+ GDSGVGKS LL+RF +NEF ++SK TIGVEF TR++ ++
Sbjct: 1 MAQWQGNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMD 60
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF++VE+WL ELR H D N
Sbjct: 61 HKLVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN 120
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
I++MLVGNK+DL L AV TE A+ FA++E FF+ETSAL+S NVE+AF +L+Q+Y V
Sbjct: 121 ILVMLVGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTV 180
Query: 179 SRKALDIGGDPAALPK------GQTINVGGKDD--VSAVKKVGCCN 216
SRK + + G + K G I V ++ +A K+ CC+
Sbjct: 181 SRKHILVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 152/199 (76%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG- 187
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 STNGNVNGASAPNGPTISL 207
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 24 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 83
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIMLVGNK
Sbjct: 84 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 143
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL AV +EDA F+E + FF ETSAL NVE AF VL +IY VVS+KAL+ G
Sbjct: 144 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDG 203
Query: 188 DP----AALPKGQTINVGGKDD--VSAVKKVGCC 215
A+ KG I+V D +S VKK+ C
Sbjct: 204 KSNGCDASNLKGSKIDVISASDLEISEVKKLSAC 237
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 20 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 79
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIMLVGNK
Sbjct: 80 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 139
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL AV +EDA F+E + FF ETSAL NVE AF VL +IY VVS+KAL+ G
Sbjct: 140 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDG 199
Query: 188 DP----AALPKGQTINVGGKDD--VSAVKKVGCC 215
A+ KG I+V D +S VKK+ C
Sbjct: 200 KSNGCDASNLKGSKIDVISASDLEISEVKKLSAC 233
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 163/218 (74%), Gaps = 3/218 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAA D++ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+I+V DK
Sbjct: 1 MAADSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN+++WL+ELR ++V
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
I+LVGNK+DL H V E+ K AE E FMETSALE++NVE AF ++T+I+ V S+
Sbjct: 121 IVLVGNKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQ 180
Query: 181 KALDIGGDPAALPK--GQTINVGGKDDVSAVKKVGCCN 216
K L+ + P G+ I + +VSA K+ CC+
Sbjct: 181 KNLEAKLNEPVKPLIIGKEI-IHVDHEVSATKQSSCCS 217
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 146/176 (82%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NI+I LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
DL HL AV TE+AK FA N F E SAL S NV+ +F ++L IY ++S+ L+
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLE 186
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 158/215 (73%), Gaps = 1/215 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+ DE YD+L+K+VLIGDSGVGK+NLLSRFT+NEF+++SK TIGVEFAT+++ E+K
Sbjct: 1 MASKNEDE-YDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQE+YRAIT+AYYRGAVGAL +YD+T+ TF+NV++WL ELR + D+NI+
Sbjct: 60 YIKAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANII 119
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
ML+GNK DL+ + V TEDA FAE N FMETSA +++NV+ AF +++T+IY+ +
Sbjct: 120 CMLIGNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKT 179
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ + G I K A K+ CC
Sbjct: 180 RPNEEKKKAQPQQNGNNIIKDFKQPTQAEKEKKCC 214
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 146/176 (82%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YLYK+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL+ H D+NI+I LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
DL HL AV TE+AK FA N F E SAL S NV+ +F ++L IY ++S+ L+
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLE 186
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 152/199 (76%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG- 187
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 STNGNVNGASAPNGPTISL 207
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 166/226 (73%), Gaps = 10/226 (4%)
Query: 1 MAAYR--ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE 58
MA ++ ADE DY++K+V+ GDSGVGKS LL+RF +NEF ++SK TIG+EF TR++ ++
Sbjct: 1 MAQWQGNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMD 60
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF++VE+WL ELR H D N
Sbjct: 61 HKLVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN 120
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
I++MLVGNK+DL L AV TE A+ FA++E FF+ETSAL+S NVE+AF +L+Q+Y V
Sbjct: 121 ILVMLVGNKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTV 180
Query: 179 SRKALDIGGDPAALPK------GQTINVGGKDD--VSAVKKVGCCN 216
SRK + + G + K G I V ++ +A K+ CC+
Sbjct: 181 SRKHILVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 155/211 (73%), Gaps = 6/211 (2%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTRNEF+LES+STIGVEFATR++ ++ K VKAQIWD
Sbjct: 10 DYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++ ++ENV +WLKEL+ + D NIVI LVGNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKS 129
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK F+ F E SAL + NV+ +F ++L I+ +VS+ D+
Sbjct: 130 DLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTDY 189
Query: 186 -GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G P+ P G + + K CC
Sbjct: 190 SGPKPSGGPTISLTPTPGNE--QSKNKSNCC 218
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 165/210 (78%), Gaps = 8/210 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++++ + +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D +IV+ML+G
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL +V TE+AK FAE++ F+ETSAL+S NVE AFT VL +I+ VS K + +
Sbjct: 123 NKSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEV-V 181
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G +A+ T+N +D +K CC
Sbjct: 182 RGPMSAV----TLNSPKAED---TEKKPCC 204
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 155/209 (74%), Gaps = 18/209 (8%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFA E AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFA------------------EAAFQTILTEIYRIVSQKQMSDR 166
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 167 RENDMSPSNNVVPIHVPPTTENKPKVQCC 195
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 161/209 (77%), Gaps = 5/209 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++V+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL + V TE+AK FA+ + FMETSALES NVE+AF EVLT I+ V+ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEV-TR 182
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G +A+ GQT G + + GCC
Sbjct: 183 GSISAVTLGQTH--GPSREFQESR--GCC 207
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 154/194 (79%), Gaps = 5/194 (2%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+NEF+LESKSTIGVEFAT+SI+ ++K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RA+TSA YRGAVGALLVYD+++H T+ENV++WLKELR D +IVIMLVGNK+DLRHL
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP-AALPK 194
V TE+AK+FA+R N F+ETSA +S NVE+AF +L +IY V R G D ++ P+
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKSSKPE 180
Query: 195 GQTINV----GGKD 204
G I V GG D
Sbjct: 181 GGEIVVNVDEGGGD 194
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 156/214 (72%), Gaps = 7/214 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI--- 185
DL HL AV T++AK FA F ETSAL S NV+ AF E++ I+ +VS+ +D+
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNGS 188
Query: 186 ---GGDPAALPKGQTINVGGKDDVSAVKK-VGCC 215
G PKG TI++ + KK CC
Sbjct: 189 GTNNGGSNGGPKGPTISLTPAPNEGKKKKSSNCC 222
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y+++YKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+++++ +KAQ
Sbjct: 3 SDESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL L V +E+A+AFAE + FMETSAL+S NVE AF EVL+ I V+ + +
Sbjct: 123 NKRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTR 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G A +G D + +K GCC +
Sbjct: 183 GSISAVTLSSP---IGATD--TQERKGGCCKS 209
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++V+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL + V TE+AK FA+ FMETSALES NVE+AF EVLT I+ V+ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEV-TR 182
Query: 187 GDPAALPKGQT 197
G +A+ GQT
Sbjct: 183 GSISAVTLGQT 193
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 162/217 (74%), Gaps = 7/217 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ ++ K+VKAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIW 74
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVI L+GNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNK 134
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL AV TEDA FAE + FF ETSAL NV+ AF +L +IY V+S+K+L+ GG
Sbjct: 135 ADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGG 194
Query: 188 DP-----AALPKGQTINV--GGKDDVSAVKKVGCCNA 217
+ + +G I+V G ++S +KK+ C+
Sbjct: 195 HKTNGADSVMLRGSKIDVISGSDLEISEMKKLSACSC 231
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++V+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL + V TE+AK FA+ FMETSALES NVE+AF EVLT I+ V+ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEV-TR 182
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G +A+ GQT G + + GCC
Sbjct: 183 GSISAVTLGQTH--GPSREFQESR--GCC 207
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+A++DYDYL+KVVL GDSGVGKSNLL RFT+N+F+ +SK+TIGVEFATRSI + KI+KA
Sbjct: 3 KAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA+LVYD+T +FE+VERW++E+R + D +IVIM++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMII 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL A+ TE + A+ FME SA + NV+ AFT+++ QIY ++++
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTKQLQK 182
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D + +G+ +++ + S KK GCC
Sbjct: 183 Y--DQMSHLQGEKLDL--EITTSGNKKQGCC 209
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 163/213 (76%), Gaps = 5/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE DYL+K VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V DK++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR ++V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-- 184
K+DL V E+ K FAE E FMETSAL+++NV+ AF E++T+I+ ++S+K+L+
Sbjct: 128 KSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVG-CCN 216
+ G LP G+ I++ D+V+A K+ CC+
Sbjct: 188 MNGTALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 161/212 (75%), Gaps = 4/212 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+++ Y++++KVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++++E+ I+KAQ
Sbjct: 3 SEDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL+ V TE+A+ FA+ + FMETSAL+S NVE+AF EVLT I+ V+ + +
Sbjct: 123 NKSDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTR 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G A G G + ++ GCC
Sbjct: 183 GSISAVTLSGPI----GLNSEQQEERKGCCKG 210
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 134/146 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIML GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFF 152
K+DLRHL AV T++A+AFAE+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 150/181 (82%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y++++KVVLIG+SGVGKSNLLSRFT+NEFS +S++TIGVEF+TR++++ +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL + +V TEDAK FAE+ F ETSALES+NVE AF VLT+I+ V+ K +
Sbjct: 123 NKSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTR 182
Query: 186 G 186
G
Sbjct: 183 G 183
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 151/204 (74%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
+L+KVVLIG SG G+SNLLSRF RNEF+L+SKST G++FATRSI+V+ K +KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QER RA TSAYYR A+GALLV+D+ +H+T+ENVERWLKE R H DSNIVIMLV NK+DL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
HL AV T++A+AFAE+ F+E+SAL NVE AF +LT+IY VS+K + +
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 192 LPKGQTINVGGKDDVSAVKKVGCC 215
P + + + K+ CC
Sbjct: 181 SPSSNMVPIHVPPTTESKPKMQCC 204
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/165 (70%), Positives = 138/165 (83%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++ K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGALLVYD+++H T+ENV +WL ELR H+D +IV+ML+GNK DLRHL V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
T++A+ FA RE FF ETSAL++ NV+ AF +VL H V+ K
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATK 165
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 152/184 (82%), Gaps = 2/184 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
++++YDYL KVVL GDSGVGK+NLLSRFTRNEFSLES+STIGVEFATRS+ ++ K +KAQ
Sbjct: 24 SEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQ 83
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQ+RYRAIT+AYYR AVG + VYD+ + TF+N+++WLKE R TD ++++MLVG
Sbjct: 84 IWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVG 143
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DLRHL AVS+++A+++AE+ N ++ETSAL+ +V+ AF +L +IY +S+K L
Sbjct: 144 NKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGLKD 203
Query: 184 DIGG 187
D GG
Sbjct: 204 DTGG 207
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D+ DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ L VST + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
RK + DPA+L G+ + V D KK GCC++
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKV-VIPSDGQGESKKGGCCSS 221
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 156/210 (74%), Gaps = 4/210 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+I+++ I+KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL +V E+AK FAE+ F+ETSALES NVE AF VL +I+ VS K +
Sbjct: 123 NKTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLR 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G A G + +K CC
Sbjct: 183 GSISAVSLASPVPRAAGDPE----EKKPCC 208
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D+ DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ L VST + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
RK + DPA+L G+ + V D KK GCC++
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKV-VIPSDGQGEFKKGGCCSS 221
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 155/211 (73%), Gaps = 4/211 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD+L+K+VLIGDSGVGKSNLLSRFT NEF+L+SK+TIGVEFATR+I VE K +KAQIWD
Sbjct: 9 DYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYR AVGAL+VYD+T+ ++EN WL EL+ + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL H AV T++A+ +A+ F ETSAL + NV+ AF ++T IY ++S+ LD+
Sbjct: 129 DLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLNDA 188
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKV-GCC 215
G+ A PKG TI++ + K CC
Sbjct: 189 SGNNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+K+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFAT+++ +++ VKAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDT+GQERYRAIT AYYRGAVGALLVYD+TR +F+NV+ WLKELR H D NIVIMLVGN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 127 KADLRHLC-AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K DL V+TED + AE+E F+ETSAL++ NV+ AF V IY + +K
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKK 177
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 163/221 (73%), Gaps = 8/221 (3%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
Y E DY++KVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNKADL V TEDA FAE + FF ETSAL NVE+AF ++L +I VVS+KAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 DIG-----GDP-AALPKGQTINV--GGKDDVSAVKKVGCCN 216
+ G GD A KG +++ G + ++S +KK+ C+
Sbjct: 203 ECGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLSSCS 243
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +++YDYL KVVLIGDSGVGKSNLLSRF +NEF+LESK+TIGVEF T++I KI+KA
Sbjct: 4 RGEDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAV A LVYD+T+ TF+NVE+WL+EL+ + DSNIV+MLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
GNK DL +L AV EDA+ +AE+ F+ETSAL+S NV AF +++ QIYH
Sbjct: 124 GNKTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII-QIYH 174
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE++K FA F ETSAL S NV+ AF E++ IY VS+ +D+ GD
Sbjct: 129 DLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDL-GD 187
Query: 189 PAA 191
AA
Sbjct: 188 SAA 190
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 158/215 (73%), Gaps = 3/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY D+ DYL+KVVLIGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+NV RWL ELR H+D+++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK DL ++ VS E+A A+ E F+ETSA+++ NV NAF V+ +IY VVS+K
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 LDIG-GDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + G + + G DD+ K CC+
Sbjct: 182 LTSSVSMKSNTVLGSSQRLAGIDDIQP--KRNCCS 214
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D+ DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K +KAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI- 185
K+DL+ + V T + KA AE + FFMETSAL+S NV AF V+ +IY+++SRK +
Sbjct: 128 KSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 ---GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
DPA+L G+ + + ++ + KK GCC+
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEEQGES-KKGGCCS 220
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 8/200 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+NV++WL ELR + + +V++L GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-- 184
K DL H V E+ K AE E FMETSALE++NVE AF E++T+I+ + S+K+L+
Sbjct: 126 KCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSLEVR 185
Query: 185 ------IGGDPAALPKGQTI 198
I ALP G+ +
Sbjct: 186 LKDANNITSKTVALPVGKEV 205
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 151/209 (72%), Gaps = 1/209 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D L+K+VLIGDSGVGK+NL SRFT EF+LESKSTIGV+FAT+++ ++ K+VKAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF N++RWL ELR + ++VIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL+HL V TEDAK FAE++ FMETSAL + NVE AF + L IY+VVS++
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRP-SFN 183
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D + + V + KK CC
Sbjct: 184 ADEGNIIPTNNLPVEEPNLKETTKKKFCC 212
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 162/213 (76%), Gaps = 5/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE DYL+K VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V DK++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR ++V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-- 184
K+DL V E+ K AE E FMETSAL+++NV+ AF E++T+I+ ++S+K+L+
Sbjct: 128 KSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVG-CCN 216
+ G LP G+ I++ D+V+A K+ CC+
Sbjct: 188 MNGTALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDYD+LYK+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ E K+++AQI
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+ + D IVIM++GN
Sbjct: 62 WDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGN 121
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
KADL V AK F +++N FF ETSAL+ NVE AF +L +I+ + +
Sbjct: 122 KADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESS 181
Query: 187 GD-PAALPKGQTINVGGKDDVSAVKKVGCC 215
D PA P I K++ K GCC
Sbjct: 182 NDKPAEKPDVVPIEPSPKEN-----KGGCC 206
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 163/211 (77%), Gaps = 7/211 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+++E Y++++KVVLIG+SGVGKSNLLSRF +NEF+ +S++TIGVEF+TR++++ +KA
Sbjct: 6 KSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKA 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLVYDVT+H+T+E+VERWLKEL H D ++V+MLV
Sbjct: 66 QIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLV 125
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL +V TE+AK FAE++ F+ETSALES NVE AF +VL++I+ VS K +
Sbjct: 126 GNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKV- 184
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
I G +A +++ G + + CC
Sbjct: 185 IQGSISA------VSLAGHVPSNPEENKPCC 209
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 149/209 (71%), Gaps = 6/209 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD+LYK+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ E K+++AQIW
Sbjct: 28 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 87
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+ + D IVIM++GNK
Sbjct: 88 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 147
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL + AK F +++N FF ETSAL+ NVE AF +L +I+ + +
Sbjct: 148 ADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTVEETSN 207
Query: 188 D-PAALPKGQTINVGGKDDVSAVKKVGCC 215
D PA P I K+ K GCC
Sbjct: 208 DKPAEKPDVVAIEPSPKES-----KGGCC 231
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 150/209 (71%), Gaps = 6/209 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD+LYK+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ E K+++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+ + D IVIM++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL V AK F +++N FF ETSAL+ NVE AF +L +I+ + +
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESSN 183
Query: 188 D-PAALPKGQTINVGGKDDVSAVKKVGCC 215
D PA P I K++ K GCC
Sbjct: 184 DKPAEKPDVVPIEPSPKEN-----KGGCC 207
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+KVV+IGDS VGKSNLLSR+ RNEFSL SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ V E+ KA AE E FFMETSAL++ NV AF V+ +IY VSRK L+ A
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILNSDSYKA 190
Query: 191 ALPKGQ-TINVGGKDDVSAVKKVGCC 215
L + +I+ KDD + GCC
Sbjct: 191 ELSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 156/215 (72%), Gaps = 3/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
AY D+ DYL+KVVLIGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ + K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFENV RWL ELR H+D+++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK DL ++ VS E+A A+ E F+ETSA+++ NV NAF V+ +IY VVS+K
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 LDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
L + G + + G DD K CC+
Sbjct: 182 LASSTSMKSNTVLGSSQRLAGIDDTQPKKN--CCS 214
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 154/203 (75%), Gaps = 4/203 (1%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFT N+F++ESKSTIGVEFATR+I VE K +KAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+DL HL A
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG--GDPAALP 193
V T++A+ FA+ F ETSAL+S NVE AF E++T IY +VS+ +D+G G+ A P
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGDSGNNNA-P 206
Query: 194 KGQTINVGGKDDVSAVKKVG-CC 215
KG TI++ + K G CC
Sbjct: 207 KGPTISLTPAPNEHKKKSSGNCC 229
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 162/222 (72%), Gaps = 9/222 (4%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
Y E DY++KVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNKADL V TEDA FAE + FF ETSAL NVE+AF ++L +I VVS+KAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 DIG-----GDP--AALPKGQTINV--GGKDDVSAVKKVGCCN 216
+ G GD A G +++ G + ++S +KK+ C+
Sbjct: 203 ECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSCS 244
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 143/179 (79%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAG ERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 125
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL HL AV T++AK FA F ETSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 126 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSG 184
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 149/209 (71%), Gaps = 6/209 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD+LYK+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ E K+++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+ + D IVIM++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
ADL V AK F +++N FF ETSAL+ NVE AF +L +I+ + +
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESSN 183
Query: 188 D-PAALPKGQTINVGGKDDVSAVKKVGCC 215
D P P I K++ K GCC
Sbjct: 184 DKPTEKPDVVPIEPSPKEN-----KGGCC 207
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 145/176 (82%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDY++++KVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR+I V D +VKAQ
Sbjct: 4 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T++ VERWLKEL H ++NIV+MLVG
Sbjct: 64 IWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
NK DL V E+AK FA+ F+ETSAL+S NVE AF +L +I+H V ++
Sbjct: 124 NKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQ 179
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 150/209 (71%), Gaps = 1/209 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E +YL+KVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ + K VKAQIW
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL ++ V E+ KA AE E FFMETSAL+S NV AF V+ +IY VSRK L+
Sbjct: 128 CDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSDS 187
Query: 188 DPAALPKGQ-TINVGGKDDVSAVKKVGCC 215
A L + +I KDD + GCC
Sbjct: 188 YKAELSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 129/142 (90%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
+ + VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGNK+DLR
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 132 HLCAVSTEDAKAFAERENTFFM 153
HL AV T++AKAFA R N+F
Sbjct: 121 HLRAVPTDEAKAFAGRTNSFLF 142
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 157/210 (74%), Gaps = 7/210 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y++++KVVLIG+SGVGKSNLLSRFT+NEFS +S++TIGVEF+TR++++ +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL H D ++V+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL +V +E+AK FA++ F+ETSALES NVE AF VL +I+ VS + +
Sbjct: 123 NKTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVLR 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G A ++N G + K CC
Sbjct: 183 GPISAV-----SLNSSGAESTEENKP--CC 205
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 154/207 (74%), Gaps = 1/207 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ VS E+AK AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQ-TINVGGKDDVSAVKKVGCCN 216
L + T+ G D A CC+
Sbjct: 190 ELSLNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 161/223 (72%), Gaps = 6/223 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y +E DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V+T + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGKDDVSAVK-KVGCCNA 217
RK + D + G+T+ + G+ DV A + K GCC++
Sbjct: 181 RKVMISQELNKQDVTRIENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+ DYL+K VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V DK++KAQI
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ++E+V RWL ELR +V++LVGN
Sbjct: 69 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL V E+AK FAE E FMETSAL+++NVE F +++T I+ + ++++LD
Sbjct: 129 KCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 188
Query: 187 GD--PAALPKGQTINVGGKDDVSAVKKVGCCN 216
D P L G+ I++ D+V+A K+ CC+
Sbjct: 189 MDETPINLSNGKEIHIA--DEVTATKQAPCCS 218
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A+ +G PA GQ + G +K CC
Sbjct: 184 NARTNAVTLGSGPA----GQELGPG--------EKRACC 210
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DIGGD 188
++ AVS E+ KA AE E FF+ETSAL+S NV+ AF V+ IY+ VSRK L D D
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 232
Query: 189 PAALPKGQTINVGGKDDVSAVKK---VGCCNA 217
+ + + KDD SA K+ CC++
Sbjct: 233 ELTVNRVSLV----KDDNSASKQSSGFSCCSS 260
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 149/195 (76%), Gaps = 3/195 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DED DYL+K VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+V DK+VK QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+N+++WL+ELR + +VI+LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL V E+A+ AE EN FFMETSA +++NVE AF E++ +I+ + S+K LD+
Sbjct: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
Query: 187 G---DPAALPKGQTI 198
A P G+ I
Sbjct: 186 KKFEKLVAFPNGKEI 200
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 143/201 (71%), Gaps = 11/201 (5%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A EDYDYLYK+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ E K+++AQ
Sbjct: 2 AQEDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAIT+AYYRGAVGAL+VYD+T+ +F+++ERWL EL+ + D IV+M+VG
Sbjct: 62 IWDTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY---------- 175
NKADL V AK F E + FF ETSAL+ NVE AF +L +IY
Sbjct: 122 NKADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYKQNVSNLDEN 181
Query: 176 -HVVSRKALDIGGDPAALPKG 195
V ++ DI LP G
Sbjct: 182 AQKVPQEKPDIVPIEPVLPNG 202
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DIGGD 188
++ AVS E+ KA AE E FF+ETSAL+S NV+ AF V+ IY+ VSRK L D D
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 189 PAALPKGQTINVGGKDDVSAVKK---VGCCNA 217
+ + + KDD SA K+ CC++
Sbjct: 190 ELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ AVS E+ K+ AE + FFMETSAL+S NV AF V+ +IY+ VSRK L+ A
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLNSDTYKA 190
Query: 191 ALP--KGQTINVGGKDDVSAVKKVGCCN 216
L + +N G + CC+
Sbjct: 191 ELSVDRVSLVNNGAATSKQSKSYFSCCS 218
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 158/212 (74%), Gaps = 8/212 (3%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
++K+V++GDSGVGKS LL+RF +NEF ++SK TIGVEF TR++ ++ K+VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
ERY+AIT+AYYRGA ALL YD+T+ TF++VE+WL ELR HTD NI++MLVGNK+DL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAAL 192
L AV TE A+ FA++E FF+ETSAL+S NVE+AF +L+Q+Y VSRK + + G +
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 193 PK------GQTINVGGKDD--VSAVKKVGCCN 216
K G I V ++ +A K+ CC+
Sbjct: 181 DKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A+ +G PA GQ + G +K CC
Sbjct: 184 NARTNAVILGSGPA----GQELGPG--------EKRACC 210
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 139/176 (78%), Gaps = 5/176 (2%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+A +DYDYL+KVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+V+ K +KA
Sbjct: 12 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKA 71
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDS-NIVIML 123
QIWDTAGQERYRA+TSAYYRGAVGALLVYDVT+ TF N RWL+ELR H D +ML
Sbjct: 72 QIWDTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVML 131
Query: 124 VGNKADLRH----LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
VGNK DL L AV D A AERE F+ETSAL++ NV+ AF +LT+IY
Sbjct: 132 VGNKTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL +L+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DIGGD 188
++ AVS E+ KA AE E FF+ETSAL+S NV+ AF V+ IY+ VSRK L D D
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 189 PAALPKGQTINVGGKDDVSAVKK---VGCCNA 217
+ + + KDD SA K+ CC++
Sbjct: 190 ELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 153/214 (71%), Gaps = 5/214 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DYL+KVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+S+ + K +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D NIV MLVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L V E++KA AE E FF+ETSAL + NV +AF V+ ++Y+ +SRKAL+
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 187 GDPAALPKGQTINV-----GGKDDVSAVKKVGCC 215
+ L ++ V G + +KK CC
Sbjct: 184 SYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 165/230 (71%), Gaps = 18/230 (7%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++RV DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELRG + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DL V E+ K AE E +F+ETSALE+ NVE AF ++ +I+ V+++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 K-ALD--IGGD------PAALPKGQTI-NVGGKDDVSAVKKVG-----CC 215
K LD + GD A +P G+ I N+ +V+A + +G CC
Sbjct: 181 KIVLDNRLNGDGNNESNGAVVPPGKEIVNI---HEVTATRPLGTSLSNCC 227
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 154/207 (74%), Gaps = 1/207 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ VS E+ K+ AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQ-TINVGGKDDVSAVKKVGCCN 216
L + T+ G D A CC+
Sbjct: 190 ELSLNRVTLVNNGSDSKQAQGYFSCCS 216
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 152/214 (71%), Gaps = 5/214 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DYL+KVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+S+ + K +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D NIV MLVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L V E++KA AE E FF+ETSAL + NV +AF V+ ++Y+ +SRKAL+
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 187 GDPAALPKGQTINV-----GGKDDVSAVKKVGCC 215
L ++ V G + +KK CC
Sbjct: 184 SYKPKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 158/221 (71%), Gaps = 6/221 (2%)
Query: 1 MAAYRAD-EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D + DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I +
Sbjct: 1 MAFYSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ + V T + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
RK + DPA+L G+ + + + + S GCC+
Sbjct: 181 RKVMTSQELNKQDPASLSNGKKVVIPSEGE-SKTGGGGCCS 220
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I + K +KAQI
Sbjct: 8 DRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+V +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI- 185
K+DL+ + V T + KA AE + FFMETSA +S NV AF V+ +IY+++SRK +
Sbjct: 128 KSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 ---GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
DPA+L G+ + + + A KK GCC
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEAQGEA-KKGGCC 219
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MAAYRADED-YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA D+D YD+L+K+VLIGDSGVGKSNLL R+T+N+F + S+STIGVEFATRSI+VED
Sbjct: 1 MALISNDQDHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVED 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
+ V+AQIWDTAGQERYRAIT+AYYR AVGALLVYD+T++ T++N+ERW+ ELR H + +I
Sbjct: 61 QFVRAQIWDTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSI 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
++LVGNK+DL+ AVS E+A A+A+ N F+ETSAL++ NVE AF +V+ IY
Sbjct: 121 SVLLVGNKSDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQTQI 180
Query: 180 RKALD 184
++ D
Sbjct: 181 KEGQD 185
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 157/219 (71%), Gaps = 20/219 (9%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQRQN 183
Query: 182 -----ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A+ +G P GQ + G +K CC
Sbjct: 184 NARTNAITLGSGPT----GQELGPG--------EKRACC 210
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E +YL+KVV+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ ++ K VKAQIW
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGA GALLVYDV+R TF+NV RWL+EL H+D+ + MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL ++ V E+ KA AE E FFMETSAL+S NV AF V+ +IY VSRK L+
Sbjct: 128 CDLENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSDS 187
Query: 188 DPAALPKGQTI--NVGGKDDVSAVKKVGCC 215
A L + N G KD + GCC
Sbjct: 188 YKAELTLNRVSIHNDGSKDGQKQGSRFGCC 217
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 138/165 (83%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+ EF+LESKSTIGVEFAT++I+ ++K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RA+TSAYYRGAVGALLVYDV++H T+E V++WLKELR D IVIMLVGNK+DLRHL
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
V TE+AK+FA+R N F+ETSA S NVE AF +L +IY V R
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVR 165
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 153/208 (73%), Gaps = 8/208 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD LYK+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA+++I ++DK VKAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ +TFENV++W+KEL+ + D ++ IM+VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
D +H+ V+T+ A A+A+R F+ETSA + NVE+AF +L QIY S K +
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVV---- 179
Query: 188 DPAALPKGQTINVGGKDDVSAVKKVGCC 215
P+ V D V K GCC
Sbjct: 180 --KPTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 160/226 (70%), Gaps = 10/226 (4%)
Query: 1 MAAYRADEDYD-YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D+ D YL+K+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ +WL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ VST + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKA-----LDIGGDPAALPKGQTINVGGKDDV---SAVKKVGCCNA 217
RK L+ G P L G+T+ + G D + KK CC++
Sbjct: 181 RKVMMSQELNKPGAP-ELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 8/214 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL+ H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---DIGG 187
R VST + KA AE + FFMETSAL+S NV AF V+ +IY+++SRK + ++
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 188 DPAALPKGQTINVGGKDD----VSAVKKVGCCNA 217
A L G+T+ + G ++ + K GCC++
Sbjct: 192 QDAPLD-GKTVVLQGDENQERATESPKSGGCCSS 224
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 158/210 (75%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+K+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGA++VYD+++ TFENVERWL+ELR ++D ++V MLVGNK+DL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
L VS E+A AERE FF+ETSAL+S NV AF V+ +I+ +VS+K L A
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSDSSKA 189
Query: 191 ALPKGQTINVGGKDDVSAVKK---VGCCNA 217
G T +G ++ S+ + + CC++
Sbjct: 190 GTLSG-TKKLGLENGNSSKPQDSGLSCCSS 218
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 145/177 (81%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
GNK+DL+ V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 153/210 (72%), Gaps = 3/210 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DY+YL+K+VLIGDS VGK+NLLSRFTR+EF+ +S++TIGVEFATR++ + K +KAQIWD
Sbjct: 11 DYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGAL+VYD++ ++E+V RWLKE++ H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKS 130
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV TE+A+ FA N F E SAL + NVE F +++ IY +VS++ D+ +
Sbjct: 131 DLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFDMDEN 190
Query: 189 PAALP--KGQTINV-GGKDDVSAVKKVGCC 215
A +TI + D K CC
Sbjct: 191 GVANKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--DIGGD 188
++ AVS ++ KA AE E FF+ETSAL+S NV+ AF V+ IY+ VSRK L D D
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 189 PAALPKGQTINVGGKDDVSAVKK---VGCCNA 217
+ + + KDD SA K+ CC++
Sbjct: 190 KLTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 161/224 (71%), Gaps = 7/224 (3%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y +E DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I +
Sbjct: 1 MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V T + K+ AE + FF+ETSAL+S NV NAF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQ-TINVGGKDDVSA-VKKVGCCNA 217
RK + D + + G+ T+ + G+D V KK GCC++
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 154/207 (74%), Gaps = 9/207 (4%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++RV DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELRG + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DL V E+ K AE E +F+ETSALE+ NVE AF ++ +I+ V+++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 K-ALD--IGGD------PAALPKGQTI 198
K LD + GD A +P G+ I
Sbjct: 181 KIVLDNRLNGDGNNESNGAVVPPGKEI 207
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 150/209 (71%), Gaps = 1/209 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E +YL+KVV+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ +E K VKAQIW
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD+TR TF+NV RWL+EL H+D+ + MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL + V E+ KA AE E FFMETSAL++ NV AF V+ +IY VSRK L+
Sbjct: 128 CDLGDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLNSDS 187
Query: 188 DPAALPKGQ-TINVGGKDDVSAVKKVGCC 215
A L + +I+ KD+ + GCC
Sbjct: 188 YKAELSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 150/207 (72%), Gaps = 2/207 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+KVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 132
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ V E+ KA AE E FFMETSAL+S NV AF V+ +IY+ VSRK L+ A
Sbjct: 133 DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILNSDSYKA 192
Query: 191 --ALPKGQTINVGGKDDVSAVKKVGCC 215
+L + + KD + GCC
Sbjct: 193 ELSLNRVSIDDSDSKDGQKQTSRFGCC 219
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 160/222 (72%), Gaps = 6/222 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
M +Y +E DYL+K+VLIGDS VGKSNLL+R+ RNEF SKSTIGVEF T++++++
Sbjct: 1 MMSYAGEEQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDG 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+N+ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V ++VGNK DL VSTE+ A AE +N +F+ETSAL+S NV+ AF V+ +IY+++S
Sbjct: 121 VTVIVGNKTDLLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILS 180
Query: 180 RKALDIGGDP--AALPKGQTINVGGKDDVSAVKKVG---CCN 216
RK L + + G+T+ + + S K+ G CC+
Sbjct: 181 RKVLSCQEQKLESKISNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 29 LLSRFTRNEFSLESKSTIGVEFATRSIRV-EDKIVKAQIWDTAGQERYRAITSAYYRGAV 87
+LSRFTR+EF+LESKSTIGVEFAT+S+ + E K++KAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 88 GALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAER 147
GALLVYD+T+ +FENVERWLKELR H D NIVI+LVGNK+DL+HL AVS E+A FA R
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 148 ENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALP-KGQTINVGGKDDV 206
E+ F+ETSAL++ NVE AF ++L +IY + +K ++ P +GQ I++ +
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQSTTQPGRGQKIHLDEERTD 180
Query: 207 SAVKKV--GCCNA 217
S +++ GCC+A
Sbjct: 181 SQIRQSRRGCCSA 193
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 153/209 (73%), Gaps = 2/209 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ AVS E+ KA AE E FFMETSAL+S NV+ AF V+ IY +SRK L+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVG--CCNA 217
L +++ D+ S+ + G CC++
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 156/211 (73%), Gaps = 4/211 (1%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+ DYL+K VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++ ++ENV +WL ELR ++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--D 184
K DL V E+ K FAE E FMETSAL+++NVE F +++T+IY + S+K L
Sbjct: 126 KCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAK 185
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P L G+ I++ D+V+A K+ C
Sbjct: 186 MEEQPINLLNGKEIHIA--DEVTATKQTSTC 214
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 145/203 (71%), Gaps = 32/203 (15%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQER 74
++VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+V+ K +K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELR H DSNIVIMLVGNK+DLRHL
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
AV TE+AK FA +I+ +VS KALD GD A P
Sbjct: 151 AVPTEEAKQFA---------------------------KIFRIVSSKALD-SGDSAQNPL 182
Query: 195 G--QTINVGGKDDVSAVKKVGCC 215
+ + + D + K GCC
Sbjct: 183 SDRKVVEITKTQDPES--KQGCC 203
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 155/217 (71%), Gaps = 7/217 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ +LSRFT++EF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIW 73
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+L+YD+T+ TF++V RW+ ELR H D++IVIML+GNK
Sbjct: 74 DTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNK 133
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG- 186
DL L AV EDA FAE + FF ETSA NV++AF +L +IY V +KAL+ G
Sbjct: 134 VDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGN 193
Query: 187 -----GDPAALPKGQTINVGGKD-DVSAVKKVGCCNA 217
D L + + G D ++S VKK C+
Sbjct: 194 GNSNVADAITLKGSKIDGISGTDLEISEVKKSSACSC 230
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 152/211 (72%), Gaps = 6/211 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+R+ K VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA+GAL+VYD+TR TFEN+ +WL ELR + S++V MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP- 189
++ VS E+ K AE EN FFMETSAL S NV+ AF V+ +I+ SR+ + D
Sbjct: 131 TNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKD 190
Query: 190 AALPKGQTINVGGKDDVS-----AVKKVGCC 215
+P+GQ + + G D A ++ CC
Sbjct: 191 DRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 158/210 (75%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+K+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGA++VYD+++ TFENVERWL+ELR ++D ++V MLVGNK+DL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
L VS E+A AERE FF+ETSAL+S NV AF V+ +I+ +VS+K L A
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSDSSKA 189
Query: 191 ALPKGQTINVGGKDDVSAVKK---VGCCNA 217
G T +G ++ S+ + + CC++
Sbjct: 190 RTLSG-TKKLGLENGNSSKPQDSGLSCCSS 218
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 159/222 (71%), Gaps = 9/222 (4%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+ E DY++KVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ + K++KA
Sbjct: 1 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKA 60
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D +IVIML+
Sbjct: 61 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLI 120
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK DL V TEDA FAE + FF ETSA NV +AF ++L +I VVS+++L+
Sbjct: 121 GNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLE 180
Query: 185 I-------GGDPAALPKGQTINV--GGKDDVSAVKKVGCCNA 217
G A KG+ I++ G + ++S +KK+ C+
Sbjct: 181 CNNGIKGNGNHDVAALKGEKIDIISGSELEISEIKKLHSCSC 222
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 140/166 (84%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +EDYDYL+K+V+IGDSGVGK+N+LSRFT++EFS+ESK TIGVEFAT+++ ++K++KA
Sbjct: 3 RPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQE+YRAIT+AYYRGAVGAL ++D+T+ TF+N+++WL EL+ + D NIVIMLV
Sbjct: 63 QIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEV 170
GNK DL AV TEDA AFAER ++ETSAL+S NV+ AF V
Sbjct: 123 GNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 4/211 (1%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R DEDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQN 183
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+A+ G N D +K CC
Sbjct: 184 -STRTSAITLG---NAQAGQDPGPGEKRACC 210
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 154/207 (74%), Gaps = 9/207 (4%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++RV DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELRG + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DL V E+ K AE E +F+ETSALE+ NVE AF ++ +I+ V+++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 K-ALD--IGGD------PAALPKGQTI 198
K LD + GD A +P G+ I
Sbjct: 181 KIVLDNRLNGDGNNESNGAVVPPGKEI 207
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 2/183 (1%)
Query: 3 AYRADEDY--DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
AY DE+ DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K
Sbjct: 2 AYGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+L+GNK DL+H VST + KA AE + FFMETSAL+S NV+ AF V+ +IY ++SR
Sbjct: 122 TILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSR 181
Query: 181 KAL 183
K
Sbjct: 182 KVF 184
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 147/206 (71%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+++ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GAL+VYD++R TF++++RWL EL DS + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
L VSTE+ KAFAE E FFMETSAL+S NV+ AF V+ +IY+ +SRK L+ A
Sbjct: 130 ESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSDSYKA 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCCN 216
L + V G + CC+
Sbjct: 190 ELSVNRVSLVNGAGSKKNLLNFSCCS 215
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 150/199 (75%), Gaps = 8/199 (4%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALDIGGDPAALPKG 195
A+ +GG A G
Sbjct: 184 STRTNAITLGGAQAGQEPG 202
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 4/211 (1%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R DEDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQN 183
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+A+ G N D +K CC
Sbjct: 184 -STRTSAITLG---NAQAGQDPGLGEKRACC 210
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+ DYL+K+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K +KAQIW
Sbjct: 9 QSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V +LVGNK
Sbjct: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNK 128
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI-- 185
DL+H VST + +A AE + FFMETSAL+S NV AF V+ +IY ++SRK
Sbjct: 129 TDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLE 188
Query: 186 --GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ +L G+ + + G+ + ++ CC++
Sbjct: 189 QKKSELQSLSSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 158/214 (73%), Gaps = 8/214 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTA 81
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+++ +F++V RW+ ELR H DS+IVIML+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
V EDA FAE + FF ETSAL NVE+AF ++L +I+ V+S+++L+ G A
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGNGKA 201
Query: 191 ------ALPKGQTINV--GGKDDVSAVKKVGCCN 216
A KG I+V G + +++ +KK+ C+
Sbjct: 202 NADNNLATLKGSKIDVISGAELEITDMKKLSSCS 235
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 11/214 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNS- 184
Query: 187 GDPAALPKGQTINVG----GKDDVSAVKKVGCCN 216
P+ I +G G++ K+ C N
Sbjct: 185 ------PRSNAIALGSAQAGQEPGPGQKRACCIN 212
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 153/217 (70%), Gaps = 4/217 (1%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R+D+DYD L KVVLIGDSGVGK+N LSRF R EF SK TIGVEFAT+++ +E ++K
Sbjct: 6 RSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKC 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAIT+AYYRGAVGALLVYDVTR +FE++ RWL ELR H S++V+MLV
Sbjct: 66 QIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLV 125
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK DL VS + + A+RE F+ETSAL+ NVE AF+ V +I+ +V ++ L+
Sbjct: 126 GNKTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLE 185
Query: 185 IGG----DPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ A +P+G +I + + ++ CC++
Sbjct: 186 SQAAEDEELAPMPRGISIPIAVQPTQPQQQQSRCCSS 222
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 151/228 (66%), Gaps = 22/228 (9%)
Query: 3 AYRADEDY--DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
AY DE+ DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K
Sbjct: 2 AYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+LVGNK DL+H VST + KA AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 181 KALD-----------IGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K G P L GG+ CC++
Sbjct: 182 KVFQSQEQKRSEQSLSNGKPVMLSDSNEPTSGGR---------WCCSS 220
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 152/209 (72%), Gaps = 2/209 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ AVS E+ KA AE E FFMETSAL+S NV+ AF V+ IY VSRK L+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVG--CCNA 217
L +++ D+ + + G CC++
Sbjct: 190 ELSMKNRVSLVKDDNKGSTQGFGFSCCSS 218
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 11/214 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQNQNS- 184
Query: 187 GDPAALPKGQTINVG----GKDDVSAVKKVGCCN 216
P+ I +G G++ K+ C N
Sbjct: 185 ------PRSNAIALGSAQAGQEPGPGQKRACCIN 212
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 156/221 (70%), Gaps = 6/221 (2%)
Query: 3 AYRAD--EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
AY D + DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K
Sbjct: 2 AYDGDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+LVGNK DL+H VST + +A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSR 181
Query: 181 KALDI----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
K + +L G+ + + G+ + ++ CC++
Sbjct: 182 KVFQSLEQKKSELQSLSNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 159/224 (70%), Gaps = 9/224 (4%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A + E DY++KVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ + K++
Sbjct: 10 AEKLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLI 69
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D +IVIM
Sbjct: 70 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIM 129
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL V TEDA FAE + FF ETSA NV +AF ++L +I VVS+++
Sbjct: 130 LIGNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRS 189
Query: 183 LDI-------GGDPAALPKGQTINV--GGKDDVSAVKKVGCCNA 217
L+ G A KG+ I++ + ++S +KK+ C+
Sbjct: 190 LECNNGIKGNGNHDVAALKGEKIDIISASELEISEIKKLHSCSC 233
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 146/205 (71%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+VLIGDS VGKSNLL+RF RNEF SK+TIGVEF T+ + +E K +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR +F++V+RWL+EL H D+ MLVGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ VS E+ K AE E+ FFMETSAL+S NVE AF V+ +IYH +SRK L+ A
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYKA 191
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCC 215
L + V + S CC
Sbjct: 192 ELTVNRVSLVKNNANSSKQSSFSCC 216
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/139 (79%), Positives = 129/139 (92%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIM N
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADN 124
Query: 127 KADLRHLCAVSTEDAKAFA 145
K+DLRHL AV T++A+AFA
Sbjct: 125 KSDLRHLRAVPTDEARAFA 143
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 151/211 (71%), Gaps = 6/211 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+R+ K VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA+GAL+VYD+TR TFEN+ +WL ELR + S++V MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP- 189
+ VS E+ K AE EN FFMETSAL S NV+ AF V+ +I+ SR+ + D
Sbjct: 131 TDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKD 190
Query: 190 AALPKGQTINVGGKDDVS-----AVKKVGCC 215
+P+GQ + + G D A ++ CC
Sbjct: 191 DRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 156/217 (71%), Gaps = 20/217 (9%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK----- 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNST 185
Query: 182 ---ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A+ +GG GG++ S K+ CC
Sbjct: 186 RTNAITLGGAQ-----------GGQEPGSGEKR-ACC 210
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 144/176 (81%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQ
Sbjct: 5 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
NK+DL H V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 125 NKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 156/210 (74%), Gaps = 7/210 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+DE Y++++KVVLIG+SGVGKSNLLSR+T+NEF+ +S++TIGVEF+TR++ + +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T++++ERWLKEL H ++NIV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL +V TE+A+ FAE F+E+SALES NVE AF VL +I K L
Sbjct: 123 NKTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQ 182
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
G + +G ++N + ++ K CC
Sbjct: 183 GAN-----RGVSLNSSKAEIITENKP--CC 205
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 154/223 (69%), Gaps = 9/223 (4%)
Query: 3 AYRADEDY--DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
AY DE DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K
Sbjct: 2 AYGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVV 121
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+L+GNK DL+H VS + KA AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSR 181
Query: 181 KALDI----GGDPAALPKGQTINVGGKDDVSAVKKVG--CCNA 217
K + +L G+ + V D SA G CC++
Sbjct: 182 KVFQSQEQKKSELQSLSNGKAV-VLQSDAPSATSSGGRWCCSS 223
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 145/189 (76%), Gaps = 4/189 (2%)
Query: 3 AYRADEDY--DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
AY DE+ DYL+K+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K
Sbjct: 2 AYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+LVGNK DL+H VST + KA AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 181 KALDIGGDP 189
K D+ +P
Sbjct: 182 K--DLMTEP 188
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 154/212 (72%), Gaps = 6/212 (2%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 124 GNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQN 183
Query: 185 -IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ AL Q + A +K CC
Sbjct: 184 STRTNAIALGSAQ-----AGQEPGAGQKRACC 210
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 157/212 (74%), Gaps = 5/212 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+ DYL+K VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++R ++ENV +WL ELR ++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KADLRHLC-AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
K DL V E+ K FAE E FMETSAL+++NVE F +++T+IY + S+K L
Sbjct: 126 KCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 185
Query: 186 GGD--PAALPKGQTINVGGKDDVSAVKKVGCC 215
D P L G+ I++ D+V+A K+ C
Sbjct: 186 KMDEKPINLLNGKEIHIA--DEVTATKQSSTC 215
>gi|302142882|emb|CBI20177.3| unnamed protein product [Vitis vinifera]
Length = 171
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 151/220 (68%), Gaps = 54/220 (24%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KV SKSTIGVEFATR++ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRTLNVDGK 35
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR HTD NIV
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 95
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+AERE+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 96 ----------------------TYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 133
Query: 181 KALDIGGDPAA---LP-KGQTINVGGKDDVSAVKKVGCCN 216
K+++ GGD A +P KG+ INV KDD SA+K+VGCC+
Sbjct: 134 KSVE-GGDEGAASSVPAKGERINV--KDDASALKRVGCCS 170
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ ++ K+VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIW 82
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ V+F++V RW++ELR H D + VIMLVGNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 128 ADLR-HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH--VVSRKALD 184
ADL AV TEDA FAE + FF E SAL NV+ AF +L +I+ VVSRKA++
Sbjct: 143 ADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 185 I-GGDPAALPKGQTINVGGKD-DVSAVKKVGCCN 216
GG P L + + G D ++S +K+ C+
Sbjct: 203 SDGGAPVKLDGSRIDVISGSDLEISKIKEQASCS 236
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 6/223 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y +E DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V T + KA AE + FFMETSAL+S NV +AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVG-GKDDVSAVKKVGCCNA 217
RK + D G+T+ + G +V K GCC++
Sbjct: 181 RKVMMSQELKKQDTPWTENGKTVVLQEGDREVEVESKKGCCSS 223
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 153/208 (73%), Gaps = 8/208 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD LYK+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA++++ ++DK +KAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ +TFENV++W+KEL+ + D ++ IM+VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
D +H+ V+T+ A A+A+R F+ETSA + NVE+AF +L QIY S K +
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVV---- 179
Query: 188 DPAALPKGQTINVGGKDDVSAVKKVGCC 215
P+ V D V K GCC
Sbjct: 180 --KPTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 145/176 (82%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+EDY++++KVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR+I V D +VKAQ
Sbjct: 4 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T++ V+RWLKEL H +++IV+MLVG
Sbjct: 64 IWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
NK DL V E+AK FA+ F+ETSAL+S NVE AF +L +I++ V ++
Sbjct: 124 NKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQ 179
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 159/223 (71%), Gaps = 6/223 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y DE DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I +
Sbjct: 1 MAHYNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V+T + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKALD----IGGDPAALPKGQTINVGGKD-DVSAVKKVGCCNA 217
RK + + + G+++ + G++ + K GCC++
Sbjct: 181 RKVMMSQELTKHEVPRIENGKSVVIQGENLEADGQSKKGCCSS 223
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 142/177 (80%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R DEDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
GNK+DL V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 152/211 (72%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D +YL+K+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ + +E K VKAQI
Sbjct: 6 DRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGA GAL+VYD+TR TFE+V+RWL+EL H D+ + MLVGN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL + AVS E+ KA AE E FFMETSAL++ NV+ AF V+ +I++ VSRK L+
Sbjct: 126 KCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSD 185
Query: 187 GDPAALPKGQTINVGGKD-DVSAVKKVGCCN 216
A L + V +D S+ + CC+
Sbjct: 186 AYKAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA R +E YDYL+KVV+IGDSGVGKSNLL R+T+ +F++ESK+TIGVEFAT+SI+ +DK
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 61 -IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
+VKAQIWDTAGQERYRAIT+AYYRGAVGALLVYDVT +F++V WLKEL+ + DSNI
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VI+LVGNK DL+ V E+A A+A++ + F+ETSAL+ NV+ AF ++ +IY V+S
Sbjct: 121 VILLVGNKTDLKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV-EDKIVKAQI 66
E+YDYL+K+VLIGD+GVGKSNLL R+T+N+F + S+STIGVEFATR++++ +D VKAQI
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYR AVGAL+VYD+++ +FEN+++W++ELR H DSNI I L+GN
Sbjct: 70 WDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL+HL AV EDA+ A+ F+ETSAL SMNV+ AF ++ +IY + D G
Sbjct: 130 KSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLTLAGKFDYG 189
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 146/176 (82%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D + L+K+VLIGDSGVGK+NL SRFT +EF+LESKSTIGV+FAT++++++ K+VKA
Sbjct: 3 RKDSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGA+LVYD+++ TF N+ +WL+EL+ + +++IML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLI 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
GNK DL+HL V TEDA +A+++ FMETSAL+S+NVE AF + + IY+++S+
Sbjct: 123 GNKCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISK 178
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 142/177 (80%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 17 RGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 76
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 77 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 136
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
GNK+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 137 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 156/214 (72%), Gaps = 8/214 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ + K++KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTA 81
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW+ ELR H DS+IVIML+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
V EDA FAE + FF ETSAL NVE++F ++L +I+ V+S+++L+ A
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKA 201
Query: 191 ------ALPKGQTINV--GGKDDVSAVKKVGCCN 216
A KG I+V G + +++ +KK+ C+
Sbjct: 202 NADNNVATLKGSKIDVISGAELEIAEMKKLSSCS 235
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 151/205 (73%), Gaps = 2/205 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R +TF+NV RWL+EL+ H DSN+V MLVGNK+DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
H+ V ED + AE E FF+ETSAL++ NV AF V+ +IY+ VS+K L+ +
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSYKS 187
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCC 215
L + + G+D K CC
Sbjct: 188 ELSLNRVKIMDGEDPPKT--KYSCC 210
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 2/207 (0%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
YL+KVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
++ VS E+ K+ AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 192 LPKGQTINVGGKDDVSAVKK--VGCCN 216
L + V + S K CC+
Sbjct: 194 LSVNRVSLVNNGNSTSKQSKGYFSCCS 220
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 149/206 (72%), Gaps = 2/206 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ AVS E+ K+ AE E FFMETSAL+S NV+ AF V+ +IY +SRK L+
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCCN 216
L + V K++ K CC+
Sbjct: 190 ELTVNRVSLV--KNENEGTKTFSCCS 213
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 152/211 (72%), Gaps = 1/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D +YL+K+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ + +E K VKAQI
Sbjct: 6 DRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGA GAL+VYD+TR TFE+V+RWL+EL H D+ + MLVGN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL + AVS E+ KA AE E FFMETSAL++ NV+ AF V+ +I++ VSRK L+
Sbjct: 126 KCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSD 185
Query: 187 GDPAALPKGQTINVGGKD-DVSAVKKVGCCN 216
A L + V +D S+ + CC+
Sbjct: 186 AYKAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 164/219 (74%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAA DE DYL+K VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V DK
Sbjct: 1 MAADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQER+RAITS+YYRGA+G +LVYD+TR TF NV +WL ELR + ++V
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LV NK+DL V E+ + FAE E FMETSAL+++NVE AF E++T+I+ ++S+
Sbjct: 121 VVLVANKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQ 180
Query: 181 KALDI---GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
K+L+ G ++P G+ I V D+V+A K+ CC+
Sbjct: 181 KSLETKMNGPTTLSVPIGKEIQVA--DEVTATKQANCCS 217
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 156/214 (72%), Gaps = 8/214 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+K+VL GDS VGKSNLL+RF RNEF +SKSTIGVE T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL+ H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---DIGG 187
R VST + KA AE + FFMETSAL+S NV AF V+ +IY+++SRK + ++
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 188 DPAALPKGQTINVGGKDD----VSAVKKVGCCNA 217
A L G+T+ + G ++ + K GCC++
Sbjct: 192 QDAPL-DGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 149/206 (72%), Gaps = 2/206 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ AVS E+ K+ AE E FFMETSAL+S NV+ AF V+ +IY +SRK L+
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 188
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCCN 216
L + V K++ K CC+
Sbjct: 189 ELTVNRVSLV--KNENEGTKTFSCCS 212
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 144/177 (81%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R++EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKA
Sbjct: 4 RSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
GNK+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 149/193 (77%), Gaps = 7/193 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+Y YL+K+VLIG+ GVGKSNLLSRFTRNEF+L+SK TIGVEFAT+ I VE K VK QIWD
Sbjct: 4 EYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAG ER+R S+YYRGA+GALLVYD+++H T+E+VE+WLK LR H + +IVI LVGNK+
Sbjct: 64 TAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKS 123
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL H AV T++AK +AER + F+ETSAL++ NVE AFT ++T+IY +VS K D G
Sbjct: 124 DLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEKYKDHSGT 181
Query: 189 --PAA---LPKGQ 196
P+ PK Q
Sbjct: 182 IIPSTASNTPKNQ 194
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 159/225 (70%), Gaps = 9/225 (4%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D+ DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V T + K AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKA-----LDIGGDPAALPKGQTINV--GGKDDVSAVKKVGCCNA 217
RK L+ G P L G+T+ + G + +A K GCC++
Sbjct: 181 RKVILSQELNKPGAP-ELGNGKTVVLQGDGNQEGNAETKKGCCSS 224
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 155/210 (73%), Gaps = 6/210 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD-I 185
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNST 185
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ L Q GG++ S K+ CC
Sbjct: 186 RTNAITLGSAQ----GGQEPGSGEKR-ACC 210
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 153/214 (71%), Gaps = 11/214 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DEDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQRQNS- 184
Query: 187 GDPAALPKGQTINVG----GKDDVSAVKKVGCCN 216
+ I +G G+D K+ C N
Sbjct: 185 ------TRANAITLGNAEAGQDSGPGEKRACCIN 212
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 150/208 (72%), Gaps = 2/208 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ AVS ++ K+ AE E FFMETSAL+S NV+ AF V+ +IY VSRK L+ A
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNSETYKA 190
Query: 191 ALPKGQT--INVGGKDDVSAVKKVGCCN 216
L + +N G CC+
Sbjct: 191 ELSVNRVSLVNNGASTSKQNQPYFSCCS 218
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ AVS ++ K+ AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNSETYKA 190
Query: 191 ALPKGQT--INVGGKDDVSAVKKVGCCN 216
L + +N G CC+
Sbjct: 191 ELSVNRVSLVNNGAATSKQNQTYFSCCS 218
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 151/207 (72%), Gaps = 1/207 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLL+R+ RNEF+L SK+TIGVEF T+++ ++ K VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GAL+VYD+TR TF+++ RWL EL+ H+D+ + MLVGNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ AVS E+ K+ AE E FFMETSAL++ NV AF V+ +IY+ VSRK L+ A
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKA 181
Query: 191 ALPKGQTINV-GGKDDVSAVKKVGCCN 216
L + V G D + CC+
Sbjct: 182 ELSVNRVSLVDNGTDGSKQNQGYSCCS 208
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 149/216 (68%), Gaps = 33/216 (15%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+K ESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFK-------------------------ESKSTIGVEFATRSIQVDGKTIKAQI 39
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 40 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 99
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSA++S NVE AF +LT+IY +VS+K +
Sbjct: 100 KSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDSTNVEEAFKNILTEIYRIVSQKQI--- 156
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCCNA 217
D AA + I+V D K+ CC +
Sbjct: 157 ADRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 192
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 155/214 (72%), Gaps = 8/214 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ + K++KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTA 81
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW+ ELR H DS+IVIML+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
V EDA FAE + FF ETSAL NVE++F ++L +I+ V+S+++L+ A
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKA 201
Query: 191 ------ALPKGQTINV--GGKDDVSAVKKVGCCN 216
A KG I+V G + +++ +KK C+
Sbjct: 202 NADNNVATLKGSKIDVISGAELEIAEMKKSSSCS 235
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/187 (62%), Positives = 147/187 (78%), Gaps = 3/187 (1%)
Query: 32 RFTRNEFSLESKSTIGVEFATRSIRVE-DKIVKAQIWDTAGQERYRAITSAYYRGAVGAL 90
RFTR+EF+LESKSTIGVEFAT+SI+++ DKI+KAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 91 LVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENT 150
LVYD+T+ TFEN+E+WLKELR + DSNIVI+LVGNK+DL+HL ++ DA FA++E
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 151 FFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAAL-PKGQTINVGGKDDVSAV 209
F+ETSALE+ NVE AF ++L +IY+V +K D + P+G+ INV +D +
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQPRGKKINVDDDNDENEK 195
Query: 210 K-KVGCC 215
K K CC
Sbjct: 196 KPKTKCC 202
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 152/212 (71%), Gaps = 7/212 (3%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF++V +WL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD---IGG 187
+ VST + KA AE ++ FFMETSAL+S NV AF V+ +IY+++SRK +
Sbjct: 132 KDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMSNEFNKQ 191
Query: 188 DPAALPKGQTINVGGKDDVSAVKKV----GCC 215
D + G+T+ + G A+ + GCC
Sbjct: 192 DAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 10 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 70 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 129
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 130 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 184
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 148/190 (77%), Gaps = 3/190 (1%)
Query: 1 MAAYRADEDY---DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV 57
MA ++ D D+ DY++KVV+IGDSGVGKS LL+RF RNEF L+SK+TIGVEF T+++ +
Sbjct: 1 MAQFQGDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLM 60
Query: 58 EDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDS 117
+ K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF ++E+WL EL H D
Sbjct: 61 DHKLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADK 120
Query: 118 NIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHV 177
NIV+MLVGNK+DL + V E+A+ A+++ FF+ETSAL+S NVE AF +L+QIY
Sbjct: 121 NIVVMLVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVT 180
Query: 178 VSRKALDIGG 187
+S+K + G
Sbjct: 181 MSKKHITADG 190
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 162/217 (74%), Gaps = 14/217 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E++++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ V+ +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++ENV+RWLKEL H D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLRHLCA-VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
K DL+ V +E+AKA+AE+ F+ETSAL++ NVE AF +L IY + L +
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIY----TRVLKL 180
Query: 186 GGDPAALPKGQTINVGGK----DDVSAV--KKVGCCN 216
G + + TIN+ + ++ V +K CC
Sbjct: 181 KG---GIQQPSTINLSKEASPTQSITQVTEQKRSCCQ 214
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++DY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS- 184
Query: 187 GDPAALPKGQTINVG----GKDDVSAVKKVGCC 215
+ TI +G G+D S KK CC
Sbjct: 185 ------TRTNTITLGDTQPGQDPSSGEKK-ACC 210
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 142/181 (78%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA DE+ DYL+K VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++RV DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+ +WL ELRG + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DL V E+ K AE E +F+ETSALE+ NVE AF ++ +I+ V+++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 K 181
K
Sbjct: 181 K 181
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ V+ E+ K+ AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQTINVGGKDDVSAVKKV--GCCN 216
L + V D + CC+
Sbjct: 190 ELSLNRVTLVNNSDGSKQSQSYFSSCCS 217
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 155/220 (70%), Gaps = 11/220 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+ED DYL+K+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI +E+K++ AQ
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T V+F+NV RWL ELR D +I+IM+VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK---AL 183
K+DL VST++A++FA+ F+ETSAL S NV AF +LT IYH +K +
Sbjct: 124 KSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVM 183
Query: 184 DIGGD--PAALPKGQTINVGGKDDVSAV------KKVGCC 215
D G + + G I + VS+ KK GCC
Sbjct: 184 DDGQEWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 156/219 (71%), Gaps = 20/219 (9%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +EDY++++KVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + VKA
Sbjct: 4 RKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
A+ +G A GQ + G +K CC
Sbjct: 184 SIRTNAITLGSAQA----GQELGPG--------EKRACC 210
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 142/172 (82%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M + DE++D+++K+VLIGDS VGKSNLLSRFT+++F + K+TIGVEFATRSI ++K
Sbjct: 1 MTTIKKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERY++IT+AYYRGAVGALL+YD+T++++F N+++WL E+R H + +IV
Sbjct: 61 LIKAQIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
IMLVGNK+DL+HL V E+A FAE N F+E SAL+S NVE +F ++T
Sbjct: 121 IMLVGNKSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 148/213 (69%), Gaps = 9/213 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YD+L+K+VLIGDSGVGK+N+L RF N+F LESK TIGVEFAT++++ K VK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGA + YDVTR TF+N E+WL EL+ H D NIVI+++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV----SRKA 182
K D AV T++A F E++ F+ETSAL+ N++ AF +++ I+H + ++K
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSKTAKKV 185
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ + DP L + +T K GCC
Sbjct: 186 VQVETDPVVLSEQKTPQSKSKKSSE-----GCC 213
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 163/217 (75%), Gaps = 14/217 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+ED+++++KVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ ++ +VK+QI
Sbjct: 5 EEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++E+V+RWLKEL H D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLRHLCA-VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
K+DL+ V +E+AKA+AER F+ETSAL++ NVE AF +L IY V +
Sbjct: 125 KSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSK--- 181
Query: 186 GGDPAALPKGQTINVGGK----DDVSAV--KKVGCCN 216
GG + + TIN+ + ++ V +K CC
Sbjct: 182 GG----IQQPSTINLSKEASPTQSITQVTEQKRSCCQ 214
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 156/212 (73%), Gaps = 2/212 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E +YL+KVV+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ ++ K VKAQI
Sbjct: 4 EEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+++ + MLVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL ++ VS E+ K+ AE E FF+ETSAL+S NV+ AF V+ +IY+ +SRK L+
Sbjct: 124 KSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSD 183
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCCN 216
A L + ++ G A + CC+
Sbjct: 184 SYKAELSVNRVSLVSNGADGAKQANSRYSCCS 215
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 141/174 (81%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQIW
Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQRQNNS 185
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ L Q ++ +V++ CC
Sbjct: 186 RANAVTLSNAQP-----GQELGSVERKACC 210
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 142/175 (81%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++DY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K+DL V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 152/208 (73%), Gaps = 4/208 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ VS ED + AE E FFMETSAL+S NV+ AF V+ +IY+ VSRK L+ A
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKA 190
Query: 191 ALPKGQT--INVGGKDDVSAVKKVGCCN 216
L + +N GG + CC+
Sbjct: 191 ELSVNRVSLVNNGGSKQSEGY--LSCCS 216
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
++ AVS E+ KA AE + FFMETSAL S NV+ AF V+ IY SRK L+
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQLN 183
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 151/209 (72%), Gaps = 2/209 (0%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVE T+++ +E K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
QER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
+ AVS E+ KA AE E FFMETSAL+S NV+ AF V+ IY +SRK L+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVG--CCNA 217
L +++ D+ S+ + G CC++
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 148/185 (80%), Gaps = 3/185 (1%)
Query: 1 MAAYRADED--YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE 58
MA ++ D D DY++KVV++GDSGVGKS LL+RF RNEF ++SK+TIGVEF T+++ ++
Sbjct: 1 MAQWQGDSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMD 60
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T +F++VE+WL ELR H D N
Sbjct: 61 HKVVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-N 119
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
I++MLVGNK+DL AV E+AK FA+++ FF+ETSAL+S NVE+AF +L+QIY V
Sbjct: 120 IIVMLVGNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATV 179
Query: 179 SRKAL 183
+K +
Sbjct: 180 GKKHI 184
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 158/226 (69%), Gaps = 9/226 (3%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y +E DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ V+T + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGK----DDVSAVKKVGCCNA 217
RK + D + G+T+ + G+ + A K CC++
Sbjct: 181 RKVMMSQELNKQDVTRIENGKTVVLQGEGEGDGEADAQSKKRCCSS 226
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 156/208 (75%), Gaps = 5/208 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+ DYL+K VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V DK++KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ++E+V RWL ELR +V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL V E+AK FAE E FMETSAL+++NVE F +++T I+ + ++++LD
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 187 GDPAA---LPKGQTINVGGKDDVSAVKK 211
D L G+ I++ D+V+A K+
Sbjct: 188 MDETPINHLSNGKEIHIA--DEVTATKQ 213
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 139/177 (78%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E +YL+KVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIW
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
DL ++ V E+ KA AE E FFMETSAL+S NV AF V+ +IY VSRK L+
Sbjct: 128 CDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILN 184
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 152/217 (70%), Gaps = 4/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAA +YL+K+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + ++ K
Sbjct: 1 MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TF++ +RWL EL H D+ V
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
MLVGNK DL ++ VS E+ K AE E FFMETSAL+S NV AF V+ +IY+ VSR
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180
Query: 181 KALDIGGDPAALPKGQ-TINVGGKDDVSAVKKVGCCN 216
K L+ A L + + ++ GG S+ K CC+
Sbjct: 181 KVLNSDSYKAELSENRVSLADGG---ASSKKGFSCCS 214
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 144/184 (78%), Gaps = 1/184 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED- 59
M+A E+YD+L+K+VLIGDSGVGKSNLLSRFT+NEF+LESK+TIGVEFAT+S +E+
Sbjct: 1 MSAQHEQEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENG 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
+ VK QIWDTAGQERYRAIT+ YYRGAVGALLVYD+T+ TFE+V+RWL+EL + +S I
Sbjct: 61 QSVKVQIWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGI 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VI+LVGNK DL L V E+A FA +N F+ETSAL S NV+ AF ++ QI+ S
Sbjct: 121 VILLVGNKTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEAS 180
Query: 180 RKAL 183
+ +
Sbjct: 181 SRLI 184
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 159/224 (70%), Gaps = 15/224 (6%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+ + DY++KVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + K VKAQI
Sbjct: 24 EAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQI 83
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GN
Sbjct: 84 WDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGN 143
Query: 127 KADLR-HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
KAD+ V+ ++A FAE + FF E SAL NVE AF +L +I+ VVSR+AL++
Sbjct: 144 KADMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALEL 203
Query: 186 -------------GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
GG+ +L KG T++VG + SA+KK C+
Sbjct: 204 DEARRMRNGGAGAGGEVLSL-KGTTLDVGSIMETSAMKKSSQCS 246
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 138/177 (77%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E +YL+KVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ + K VKAQIW
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
DL ++ V E+ KA AE E FFMETSAL+S NV AF V+ +IY VSRK L+
Sbjct: 128 CDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILN 184
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 151/207 (72%), Gaps = 5/207 (2%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
YL+K+V+IGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + ++ K +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGAVGAL+VYD+TR +F++V+RWL EL H D+ I MLVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
+ VS ++ K+ AE E+ FFMETSAL+S NVE AF V+ +IY+ +SRK L+ A
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSDSYKAE 193
Query: 192 LPKGQTINVGGKDDVSAVKKVG--CCN 216
L + V G D S+ KK G CCN
Sbjct: 194 LTANRVSLVNG--DTSS-KKYGFSCCN 217
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 156/212 (73%), Gaps = 2/212 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E +YL+KVV+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ ++ K VKAQI
Sbjct: 91 EEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQI 150
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+++ + MLVGN
Sbjct: 151 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGN 210
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL ++ VS E+ K+ AE E FF+ETSAL+S NV+ AF V+ +IY+ +SRK L+
Sbjct: 211 KSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSD 270
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCCN 216
A L + ++ G A + CC+
Sbjct: 271 SYKAELSVNRVSLVSNGADGAKQANSRYSCCS 302
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 153/224 (68%), Gaps = 17/224 (7%)
Query: 6 ADEDYDYLYKVVL--------IGDSGVGKSNLL----SRFTRNEFSLESKSTIGVEFATR 53
A+++YD+L+K + S + S ++ RFTRNEF+L+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATR 61
Query: 54 SIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRG 113
SI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR
Sbjct: 62 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELRE 121
Query: 114 HTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQ 173
H D NIVIMLVGNK D +H+ V T DA FA+ F+ETSAL++ NVE AF +LT+
Sbjct: 122 HADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTE 181
Query: 174 IYHVVSRKALDIGGDPAALPKG--QTINVGGKDDVSAVKKVGCC 215
IY +VS KAL+ G + P G + I + D A +K CC
Sbjct: 182 IYRIVSSKALE-NGSSSQSPLGDRKVIEISKTQDADAKQK--CC 222
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 147/221 (66%), Gaps = 11/221 (4%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+++YDYL+K+VLIGDSGVGKSNLLSR+T+NEF L SK+TIGVE A R++ +E K V+AQ
Sbjct: 11 PEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQ 70
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA+GA+LVYD+ + +F N+ +W++ELR H ++ I+L+G
Sbjct: 71 IWDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIG 130
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL+HL + K FA FMETSAL+S NV AF + I+ V + L+
Sbjct: 131 NKSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEK 190
Query: 186 GGDPAALPKGQTINV-----------GGKDDVSAVKKVGCC 215
G P G++I + GK+ + CC
Sbjct: 191 SGQAHEKPNGESIVIKAELAELPATPNGKEHARTRQSKSCC 231
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E++++++KVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ ++ +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++E+V+RWLKEL H D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLRHLCA-VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
K DL+ V +E+AKA+AER F+ETSAL++ NVE AF +L IY V + +
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSKGET 184
Query: 186 GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P+ + + + + +K CC +
Sbjct: 185 -QQPSTINLSKEASPTQSITLVTEQKRSCCQS 215
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/163 (68%), Positives = 128/163 (78%), Gaps = 25/163 (15%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRA++DYDYL+KV SKSTIGVEFATRS+ V+ K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRSLNVDGK 35
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 95
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNV 163
+ML+GNK+DLRHL AVSTED K+FAERE+ +FMETSALE+ N+
Sbjct: 96 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNL 138
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
YL+K+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + ++ K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGA GAL+VYD++R TFE+++RWL EL DS + MLVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
++ VS E+ KA AE E FFMETSAL+S NV+ AF V+ +IY+ +SRK L+ A
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAE 191
Query: 192 LPKGQTINVGGKDDVSAVKK---VGCCN 216
L + V G S KK CC+
Sbjct: 192 LSVNRVTLVNG----SGSKKNMFSSCCS 215
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
+YL+K+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++++RWL+EL DS + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA 190
++ VSTE+ K+ AE E FFMETSAL++ NV+ AF V+ +IY+ +SRK L+ A
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDSYKA 189
Query: 191 ALPKGQTINVGGKDDVSAVKKVGCCN 216
L + V G + + CC+
Sbjct: 190 ELSVNRVSLVNG---AGSKQGPSCCS 212
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 155/220 (70%), Gaps = 12/220 (5%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+ DY++KVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GNKA
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DLRH-LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI-- 185
D+ V+ ++A FAE + FF E SAL NV+ AF +L +I+ VVSR+AL++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 186 ---------GGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
GG KG T++VG + SA+KK C+
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKKSSQCS 237
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 153/215 (71%), Gaps = 23/215 (10%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVVLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ ++ K
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
YRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELRGH D NIVIMLVGNK
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 110
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
+DL AVSTEDAK FAE+EN FF+ETSAL++ NVENAF VL++I+ + S+K ++
Sbjct: 111 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKK--NMAA 168
Query: 188 DPAALPKGQTINVGGKDDV-----SAVKKVGCCNA 217
DP A G ++ GK V + K CC++
Sbjct: 169 DPKA--NGAAPSLAGKKVVVPGPAQEIPKSKCCSS 201
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 153/214 (71%), Gaps = 5/214 (2%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E DY++KVV+IGDS VGK+ LLSRFT NEF +SKSTIGVEF TR+I + K+VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ ++F++V RW++ELR H D + VIMLVGNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 128 ADLR-HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH--VVSRKALD 184
ADL AV TEDA FAE + FF E SAL NV+ AF +L +I+ VVSRKA++
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 185 IGGDPAALPKGQTINV--GGKDDVSAVKKVGCCN 216
G G I+V G + S +K+ C+
Sbjct: 203 SDGGATVKLDGSRIDVISGSDLETSNIKEQASCS 236
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 152/224 (67%), Gaps = 16/224 (7%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+E+ +YL+K+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI +++KI+ AQ
Sbjct: 2 PEEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR +S+I+IM+VG
Sbjct: 62 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL V T++AKAFAE F+ETSAL S NV AF +LT I+++VS K +
Sbjct: 122 NKSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVV 181
Query: 186 GGD--------------PAALPKGQTINVGGKDDVSAVKKVGCC 215
D P + P Q KK GCC
Sbjct: 182 VDDVQNWLVPNQGKKLTPLSDPAPQLTTTTA--STHQQKKGGCC 223
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 139/177 (78%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E +YL+K+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+ + ++ K VKAQI
Sbjct: 3 EEGEEYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGA GALLVYD++R TFE++ RWL EL+ H D+ + MLVGN
Sbjct: 63 WDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGN 122
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
K DL ++ VSTE+ K AE E FFMETSAL++ NV+ AF V+ +I++ VSRK L
Sbjct: 123 KCDLENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVL 179
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 151/212 (71%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+YD+LYK+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL + D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL V T + + A++ N FF ETSAL+ NVE AF +L +IY S+ + G
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKS---VDG 181
Query: 188 DPAA----LPKGQTINVGGKDDVSAVKKVGCC 215
+ ++ P + I++G +++ KK CC
Sbjct: 182 EQSSNNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 158/217 (72%), Gaps = 14/217 (6%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 25 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTA 84
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML+GNK DL
Sbjct: 85 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDL 144
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI-YHVVSRKALD----- 184
V +EDA FAE + FF ETSAL NVE+AF ++L +I VVS+++L
Sbjct: 145 VDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDCNHG 204
Query: 185 ---IGGDPAALPKGQTINV--GGKDDVSAVKKVGCCN 216
GG+ KG I+V G + +++ VKKV C+
Sbjct: 205 KKTNGGNSL---KGSKIDVISGPELEITEVKKVPSCS 238
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 150/223 (67%), Gaps = 16/223 (7%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+ +YL+K+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI +++K + AQ
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR + +I+IM+VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL V T++A+AFAE F+ETSAL S NV +F +LT IYH+VS K +
Sbjct: 124 KSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVV 183
Query: 187 GD--------------PAALPKGQTINVGGKDDVSAVKKVGCC 215
D P + P Q KK GCC
Sbjct: 184 DDTQNWLVPNQGKKLTPLSDPAPQL--TANTTSTHQEKKSGCC 224
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 151/211 (71%), Gaps = 13/211 (6%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA +E+ DYL+K VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ V DK
Sbjct: 1 MAEDSYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+++WL ELR + V
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DLR V ++ K AE E FF+ETSALE++NVE AF ++ +I+ VV++
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 KA-------------LDIGGDPAALPKGQTI 198
+ ++ G+ LP G+ I
Sbjct: 181 RIASDNKSNGAATAHINGNGNGTVLPVGKEI 211
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A +++YD+LYK+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI +K +
Sbjct: 2 ANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
+AQIWDTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VERWL EL + D ++ M
Sbjct: 62 RAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
++GNK+DL V+TE+ K AE FF ETSAL+ NVE+AF +L +IY ++
Sbjct: 122 IIGNKSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAKVV 181
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+D A P T+ + ++ + K+ CC
Sbjct: 182 VD-EVKTEAKPTADTVVLTHEEPKATEKQQKCC 213
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 154/212 (72%), Gaps = 4/212 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA +E+ DYL+K VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ V DK
Sbjct: 1 MAEDTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+++WL ELR + V
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
++LVGNK+DLR V ++ K AE E +F+ETSALE++NVE AF ++ +I+ VV++
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 K-ALDIGGDPAALPKGQTINVGGKDDVSAVKK 211
+ A + + AA P IN G V V K
Sbjct: 181 RIASENKSNGAATPH---INGNGNGTVLPVGK 209
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/144 (74%), Positives = 126/144 (87%)
Query: 29 LLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVG 88
L SRFTRNEF+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVG
Sbjct: 35 LQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVG 94
Query: 89 ALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERE 148
ALLVYD+++H T+ENV RWLKELR H D+NIVIMLVGNK+DLRHL AV T++AK+FA
Sbjct: 95 ALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFASEN 154
Query: 149 NTFFMETSALESMNVENAFTEVLT 172
+ F+ETSAL++ NVE AF +LT
Sbjct: 155 HLSFIETSALDASNVELAFQNILT 178
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 150/212 (70%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+YD+LYK+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL + D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL V T + + A++ N FF ETSAL+ NVE AF +L +IY S+ + G
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKS---VDG 181
Query: 188 DPAAL----PKGQTINVGGKDDVSAVKKVGCC 215
+ + P + I++G +++ KK CC
Sbjct: 182 EQSNTNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 134/163 (82%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
+AD+DYDYL+K+VL GDSGVGKSNLL RFT+N+F+ +SK+TIGVEFATRSI + K+VKA
Sbjct: 3 KADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAIT+AYYRGA+GA+LVYD+T +FE VE+W++E+R + D +IVIM++
Sbjct: 63 QIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMII 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAF 167
GNK+DL+HL A+ TE + A+ FME SA + NV+ AF
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 155/209 (74%), Gaps = 4/209 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+ DYL K+VLIGDSGVGK+NLL+RFTR++F+ ESKSTIGVEFA++++++E K +KAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGA+GALL+YD+T +TF ++E+WLKELR + D I++MLVGNK
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKC 124
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--ALDIG 186
DL AV++ +A FA+ +N F+ETSA E+ NV AF ++ +I + ++++ A +
Sbjct: 125 DLSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEK 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P+ Q +++ KK GCC
Sbjct: 185 ANVQETPR-QGVSITATKSPEE-KKKGCC 211
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 150/212 (70%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+YD+LYK+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL + D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL V T + + A++ N FF ETSAL+ NVE AF +L +IY S+ + G
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKS---VDG 181
Query: 188 DPAAL----PKGQTINVGGKDDVSAVKKVGCC 215
+ + P + I++G +++ KK CC
Sbjct: 182 EQSNTNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 148/213 (69%), Gaps = 9/213 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DEDYDYL+K+VLIGDSGVGK+N+L RF NEF LESK TIGVEFAT++ + + K VK QI
Sbjct: 6 DEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RAIT+AYYRGAVGA + YD+TR +TF+N E+WL EL+ H D NIVI+++GN
Sbjct: 66 WDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS----RKA 182
K D AV T++A+ + E + F+ETSAL+ N++ AF +++ I++ + +K
Sbjct: 126 KIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNIKKV 185
Query: 183 LDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ + + L K + K + + GCC
Sbjct: 186 VQMATEQVLLEKPKVTQSKSKKN-----REGCC 213
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 152/215 (70%), Gaps = 12/215 (5%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+ DY++KVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GNKA
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DLRH-LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI-- 185
D+ V+ ++A FAE + FF E SAL NV+ AF +L +I+ VVSR+AL++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 186 ---------GGDPAALPKGQTINVGGKDDVSAVKK 211
GG KG T+N G + SA+KK
Sbjct: 198 ARRMRDGGAGGVQVLSLKGTTLNFGSIMETSAMKK 232
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 139/191 (72%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
YL+K+VLIGDS VGKSNLLSRF RNEF SK+TIGVE T+ + ++ K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGA GAL+VYD++R TFE+++RWL EL DS + MLVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
++ VS E+ KA AE E FFMETSAL+S NV+ AF V+ +IY+ +SRK L+ A
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNFDSYKAE 191
Query: 192 LPKGQTINVGG 202
L + V G
Sbjct: 192 LFVNRVTLVNG 202
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 157/218 (72%), Gaps = 14/218 (6%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ + K++KAQIWDTA
Sbjct: 25 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTA 84
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML+GNK D
Sbjct: 85 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDF 144
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI-YHVVSRKALD----- 184
V +EDA FAE + FF ETSAL NVE+AF ++L +I VVS+++L
Sbjct: 145 VDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDCNHG 204
Query: 185 ---IGGDPAALPKGQTINV--GGKDDVSAVKKVGCCNA 217
GG+ KG I+V G + +++ VKKV C+
Sbjct: 205 KKTNGGNSL---KGSKIDVISGPELEITEVKKVPSCSC 239
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 137/168 (81%), Gaps = 2/168 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+D+ Y+++YKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++++ VKAQ
Sbjct: 3 SDDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVG 122
Query: 126 NKADLRHLCAVSTEDAKAF--AERENTFFMETSALESMNVENAFTEVL 171
NK DL +L V +E +E + FMETSAL+S NVE AF EVL
Sbjct: 123 NKRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 146/203 (71%), Gaps = 4/203 (1%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+V DK+VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITS+YYRGA+GALLVYD+TR TF+N+++WL+ELR + +VI+LVGNK DL V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG---DPAALP 193
E+A+ AE EN FFMETSA +++NVE AF E++ +I+ + S+K LD+ A P
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 194 KGQTINVGGKDDVSAVKKVGCCN 216
G+ I + + CC+
Sbjct: 181 NGKEI-ISIHEVTPTKPNSNCCS 202
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 143/186 (76%), Gaps = 7/186 (3%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIG+ GVGKSNLLSRFTRNEF+L+SK TIGVEFAT+ I VE K VK QIWDTAG ER+
Sbjct: 25 VVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERF 84
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
R S+YYRGA+GALLVYD+++H T+E+VE+WLK LR H + +IVI LVGNK+DL H A
Sbjct: 85 RCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH--A 142
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD--PAA-- 191
V T++AK +AER + F+ETSAL++ NVE AFT ++T+IY +VS K D G P+
Sbjct: 143 VPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEKYKDHSGTIIPSTAS 202
Query: 192 -LPKGQ 196
PK Q
Sbjct: 203 NTPKNQ 208
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
DE+YDYL+KVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATRS+ +E K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD-SNIVIMLVG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TF+N+++WLKELR H D SNI IMLVG
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFM 153
NK DLRHL AV T++A +A+R + F+
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 160/214 (74%), Gaps = 7/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR-VEDKIVKAQ 65
DE DYL+KV IG+SGVGKSNL+SRF ++EF L+SK +IGVEFA +I+ V DK++KAQ
Sbjct: 8 DEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR ++V++LV
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK+DL V E K FAE E FMETSAL+++NV+ AF E++T+I+ ++S+K+L+
Sbjct: 127 NKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSLET 186
Query: 186 GGDPAA--LPKGQTINVGGKDDVSAVKKVG-CCN 216
+ AA LP G+ I++ D+V+A K+ CC+
Sbjct: 187 KMNGAALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 142/211 (67%), Gaps = 1/211 (0%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +EDYDYL+KV+ GDS VGKSN++SR TRN FS + K T+GVEF +I+ + K + A
Sbjct: 4 RCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDT G ERY + T + YRG GA+LVYD+TR TFENV +WLKELR H +SN VIML+
Sbjct: 64 QIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLI 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL+HL +VSTEDA+ FAE+E FMETSA +S NV+ A +L +I+ V S K L
Sbjct: 124 GNKSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELH 183
Query: 185 IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ G K + ++ GCC
Sbjct: 184 SEESNGVSTQDGKPTFGAKTRTN-TQRTGCC 213
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 137/179 (76%), Gaps = 4/179 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVV+IGDSGVGK+ LL RFTR+EF L+SKSTIG+EF TR++ + K VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYDVTR +FE+ RW+ ELR H D +IV++L+GNKADL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 131 RHLC----AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
AV E+A AFAE + FF E SAL NVE AF +L +I+ VSR+ L++
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEV 190
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 147/208 (70%), Gaps = 20/208 (9%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK+DL
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--------ALDIGG 187
V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ A+ +G
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGS 180
Query: 188 DPAALPKGQTINVGGKDDVSAVKKVGCC 215
PA GQ + G +K CC
Sbjct: 181 GPA----GQELGPG--------EKRACC 196
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Query: 7 DED-YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
+ED YD+L+K+VLIGDSGVGKS L+SRFT+++FS+E + TIGVEF+T++I++ DKI+KAQ
Sbjct: 6 EEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA GAL+V+D+T+ +FEN+ +W KEL+ H+D IV ML+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIG 125
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
NK DL +S + A FA+ + ++ETSAL S NVE AF +++ IY
Sbjct: 126 NKCDLADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 175
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 113/123 (91%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI VE K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELR H D NIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGN 124
Query: 127 KAD 129
K D
Sbjct: 125 KCD 127
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 150/213 (70%), Gaps = 6/213 (2%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
RA+EDY++++KVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAG E YR T YYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLV
Sbjct: 64 QIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL V T++A+ FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 123 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 182
Query: 185 -IGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
P L Q G+D K+ C N
Sbjct: 183 STRSIPITLGNAQ----AGQDPSPGEKRPCCIN 211
>gi|351725553|ref|NP_001235049.1| uncharacterized protein LOC100527366 [Glycine max]
gi|255632183|gb|ACU16451.1| unknown [Glycine max]
Length = 111
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 111/111 (100%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAY+AD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MAAYKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 134/189 (70%), Gaps = 19/189 (10%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M+ E+YDYL FTRNEF+LE+KSTIGVEFATRSI E K
Sbjct: 1 MSRLTGQEEYDYL-------------------FTRNEFNLETKSTIGVEFATRSIETEGK 41
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR + D NI
Sbjct: 42 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIE 101
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK DLRHL VST++AK FAE+ F+ETSAL+S NVE AF +LTQI H ++R
Sbjct: 102 IMLVGNKNDLRHLREVSTDEAKDFAEKHKLSFIETSALDSSNVEIAFQTILTQICHSMNR 161
Query: 181 KALDIGGDP 189
+ GG
Sbjct: 162 QPSISGGQS 170
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 134/166 (80%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK+DL+
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
V TE+A+ FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 166
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 144/201 (71%), Gaps = 4/201 (1%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQER 74
+VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK+DL
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAALPK 194
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ + +A+
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQN-STRTSAITL 214
Query: 195 GQTINVGGKDDVSAVKKVGCC 215
G N D +K CC
Sbjct: 215 G---NAQAGQDPGPGEKRACC 232
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/121 (85%), Positives = 115/121 (95%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 K 127
K
Sbjct: 125 K 125
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRV-EDKIVKAQ 65
D++YDYL+K+V++GDSGVGKSNLL R+T+NEF++ S T+G+EFAT++I+ +++I++AQ
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDT GQERYR++TSAYYRGAVGAL+VYDVT +F+NV+ WLKELR +SNIV++LVG
Sbjct: 62 IWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVG 121
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
NK DL+ V EDA FA+ + F+ETSALE NV+ AF ++ +I+ VV++++
Sbjct: 122 NKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQS 178
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 142/197 (72%), Gaps = 6/197 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKA 64
AD++YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + KI KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F +V +WL EL + D+NI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL HL V+ ED +AFA + F ETS L S NV+ AF E+L++I +R D
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKISDKNTR--FD 180
Query: 185 IGG---DPAALPKGQTI 198
GG A +PK +
Sbjct: 181 DGGASLTDAQMPKNTVV 197
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 150/219 (68%), Gaps = 10/219 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+E+ DYL+K+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI +E K++ AQ
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQC 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGA+GA++VYD+T ++F+NV RWL ELR + +I++M+VGN
Sbjct: 63 WDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGN 122
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DL VST +A++FAE F+ETSAL S NV +F ++LT IY+ +K +
Sbjct: 123 KSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVV 182
Query: 187 GDPA-----ALPKGQTINVGGKDDVSAV-----KKVGCC 215
D GQ I + V+ K GCC
Sbjct: 183 MDDGQEWLKPTQSGQKITPLNEAPVNVTSTHQEPKKGCC 221
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKA 64
AD +YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++++ + KI KA
Sbjct: 3 ADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +F++V RWL EL + D+N+VI+L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLA 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL +L VSTEDA+ FA+ N F ETS L S NVE AFTE+L+ I
Sbjct: 123 GNKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKA 64
AD+ YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + KI KA
Sbjct: 3 ADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F NV +WL EL + DSNI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL HL V+ ED +AFA + F ETS L S NV+ AF E+L++I
Sbjct: 123 GNKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 141/197 (71%), Gaps = 2/197 (1%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS-IRVEDKIVKA 64
+D+ YDYLYK+VLIGDS VGKSNLL+R+T+NEF+LESKSTIGVEFAT + I K+ K
Sbjct: 3 SDDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKV 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGAL+ YD+T +FENV+RWLKELR + + VI LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK D+ +L V+ ++ A EN F+E SAL+S NV AF E++ IY ++
Sbjct: 123 GNKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTTQAKTTNY 182
Query: 185 IGGDPA-ALPKGQTINV 200
G D + LP IN+
Sbjct: 183 EGMDTSQQLPTCVGINL 199
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 139/188 (73%), Gaps = 8/188 (4%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLV+D+T+H T+ ERWLKEL H ++ IV+MLVGNK+DL+
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--------ALDIGG 187
V TE+A+ FAE F+ETSAL+S NVE AF VL +I VS++ A+ +GG
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQRQSSSRTNAITLGG 180
Query: 188 DPAALPKG 195
A +G
Sbjct: 181 AQAGQEQG 188
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 129/164 (78%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
+YK+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I E K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL+ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
V+T D FA++ + FF+ETSALE NVE AF+++L QIY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK 171
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 133/173 (76%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+DYDYLYKVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ IR D+ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ +FE+++RWL ELR + D +V M+VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
DL + V+ ++ + A++ FF ETSAL+ NVE AF ++ +I +R
Sbjct: 124 CDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKICDEQTR 176
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 149/214 (69%), Gaps = 9/214 (4%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKA 64
AD++YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + KI KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F +V +WL EL + D NI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLV 122
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DL HL V+ ED +AFA + F ETS L S NV+ AF E+L++I +R D
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRISEKHTR--FD 180
Query: 185 IGGDP---AALPKGQTINVGGKDDVSAVKKVGCC 215
P + +PK TI +G K KK+ CC
Sbjct: 181 SSTFPVSGSTMPK-NTIVLGVK--AMRKKKISCC 211
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 132/173 (76%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+DYDYLYKVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ IR D+ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ +FE+++RWL ELR + D +V M+VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
DL + VS ++ + A++ FF ETSA + NVE AF ++ +I +R
Sbjct: 124 CDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKICDEQTR 176
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 138/171 (80%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +DYDY YK+V+IGDSGVGK+N++++FTR EFS E+K+T+GVEFA + + ++DKI+KA
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
Q+WDTAGQERYRAI S+YY+GA GAL+V+D+T+ TF+NV+RW+KE++ T + I I+LV
Sbjct: 62 QLWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILV 121
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
GNK+DLRHL VS++ + A+A + F+ETSA + NV AF +++ +I+
Sbjct: 122 GNKSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH 172
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 139/178 (78%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
++ +L+K+VLIGDS VGKSN+LSRFT+ +F+ +S+ TIGVEFATRS+ KI++AQ
Sbjct: 5 PQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDT GQERY++ITSAYYRGAVGA+L+YD+T+ TFEN+E+W++EL+ + ++N+V ML+G
Sbjct: 65 IWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIG 124
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
NKADL+ V ++ A FAE FME SA + NV+ AF+ ++ +IY ++++++L
Sbjct: 125 NKADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSL 182
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 129/164 (78%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
+YK+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I E K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL+ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
V+T D FA++ + FF+ETSAL+ NVE AF+++L QIY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
Query: 56 RVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHT 115
+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELR H
Sbjct: 1 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHA 60
Query: 116 DSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSNIVIMLVGNK+DL+HL VST+DA+AF+E+E F+ETSALES NVE AF +LT+IY
Sbjct: 61 DSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIY 120
Query: 176 HVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+VS+KAL + P GQ N+ D + K GCC+A
Sbjct: 121 RIVSKKALASEENTTEGP-GQGTNIVPLDSNAPDLKKGCCSA 161
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 129/164 (78%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
+YK+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I E K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL+ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
V+T D FA++ + FF+ETSAL+ NVE AF+++L QIY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 129/164 (78%)
Query: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQ 72
+YK+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I E K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL+ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 133 LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
V+T D FA++ + FF+ETSAL+ NVE AF+++L QIY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 144/200 (72%), Gaps = 7/200 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQI 66
E YD+++K+VL+GDSGVGKSNL+ RFT+NEF+ +SKSTIGVEFAT+++++ED K+VKAQI
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYR+I S+YYRGAVGALLVYDVT +F +V WLKE+ + + + +IMLVGN
Sbjct: 64 WDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL V D ++FA + F+ETSAL++ V+ AF +L +IY ++K L
Sbjct: 124 KMDLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQ 183
Query: 187 GDPAALP------KGQTINV 200
G P GQTI++
Sbjct: 184 GGGGKAPAKTGPKAGQTISL 203
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 132/166 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK+DL
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 132/174 (75%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
D D LYKVV+IGDSGVGKSNL++RFT+N+F+ ++K TIGVEF +SI + +K QIWD
Sbjct: 2 DCDVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWD 61
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQER+RAI++AYYRGA GAL+VYD+T +F+N+E+W KE+ ++ + +LVGNK
Sbjct: 62 TAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKC 121
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
DL HL V T +AFAE+ N FMETSAL+S NV+ AFT +L +IY SRK+
Sbjct: 122 DLNHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 149/215 (69%), Gaps = 18/215 (8%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
Y +E DY++KVV+IGDS VGK+ +LSRF++NE ++ + K++K
Sbjct: 17 YDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIK 60
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V +W++ELR H D++IVIML
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIML 120
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK DL L V TEDA FAE + FF ETSAL +NVE AF ++L +I VVS+KAL
Sbjct: 121 VGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKAL 180
Query: 184 DIGGDPAALPKGQTINV--GGKDDVSAVKKVGCCN 216
+ G KG I+V G + ++S +KK+ C+
Sbjct: 181 ECGNVKGIALKGSKIDVISGAELEISEIKKLSSCS 215
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 156/229 (68%), Gaps = 22/229 (9%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+ + DY++KVV++GDS VGK+ LL+RFTR+EF+L+SKSTIGVEF TR++ + K VKAQI
Sbjct: 27 EAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQI 86
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD-SNIVIMLVG 125
WDTAGQERYRA+TSAYYRGA+GA++VYDVTR TFE+V RW++ELR H D S+ V+ L+G
Sbjct: 87 WDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIG 146
Query: 126 NKADLRH-LCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
NKAD+ V+ ++A AE + FF E SAL NVE AF +L +++ VVSR+AL+
Sbjct: 147 NKADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRALE 206
Query: 185 IGGDPAALP------------------KGQTINVGGKDDVSAVKKVGCC 215
+ D A KG ++VG + SA+K+ C
Sbjct: 207 L--DEARRMRGDQGQGDGGRGGEVLSLKGTAVDVGSIMETSAMKRSSQC 253
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+ DY++KVV++GDS VGK+ LL RF ++EF L+SKSTIGVEF TR++ + K VKAQIWD
Sbjct: 21 EIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 80
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYDVTR TF++V RW++ELR H D + V+ LVGNKA
Sbjct: 81 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKA 140
Query: 129 DLR-HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
D H V ++A FAE + FF E SAL NVE AF +L +++ VVSR+AL++
Sbjct: 141 DAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRALEL 198
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 135/177 (76%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M ++ YDYL+K+VL+GDSGVGKSNLL RF +NEF ++TIGVEF+T+S+++E +
Sbjct: 1 MESFDNSNFYDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQ 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRA+T AYYR AVGALL+YD+T +FEN+++W EL H+++N V
Sbjct: 61 LVKAQIWDTAGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHV 177
++LVGNK DL A+ E+A+ FA+ N F+ETSAL + NV AF ++T+I+ +
Sbjct: 121 MILVGNKCDLSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 129/155 (83%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYR 76
VLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ V D VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAV 136
AITSAYYRGAVGAL+V+D+T+H T++ VERWLKEL H +++IV+MLVGNK+DL V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 137 STEDAKAFAERENTFFMETSALESMNVENAFTEVL 171
TE+AK FAE + F+ETSAL+S NVE AF VL
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|217069930|gb|ACJ83325.1| unknown [Medicago truncatula]
Length = 108
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/108 (94%), Positives = 107/108 (99%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 118/136 (86%)
Query: 37 EFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 96
+F+L+SKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD++
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 97 RHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETS 156
+H T+ENV RWLKELR H DSNIVIMLVGNK+DLRHL AV TE+AK FA N F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 157 ALESMNVENAFTEVLT 172
AL++ NVE AF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|102139910|gb|ABF70059.1| GTP-binding protein, putative [Musa acuminata]
Length = 175
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 132/175 (75%), Gaps = 6/175 (3%)
Query: 46 IGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE 105
+ F ++ KI ++ + A RYRAITSAYYRGAVGALLVYDVTRH TFENV
Sbjct: 2 FNLRFLVYRLQFAQKISRSMNINLAYNCRYRAITSAYYRGAVGALLVYDVTRHTTFENVS 61
Query: 106 RWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVEN 165
RWL+ELR HTD NI+IML+GNK+DLRHL AV TED KA+AE+E+ +FMETSALE+ NV+N
Sbjct: 62 RWLRELRDHTDPNIIIMLIGNKSDLRHLVAVPTEDGKAYAEKESLYFMETSALEATNVDN 121
Query: 166 AFTEVLTQIYHVVSRKALDIGGDPA--ALPK-GQTINVGGKDDVS-AVKKVGCCN 216
AF EVLTQIYH+VSRKA++ G D A A P G+ INV KDD S ++K+ CC+
Sbjct: 122 AFAEVLTQIYHIVSRKAVEAGDDAASSAPPSTGERINV--KDDASTTMRKLSCCS 174
>gi|297740452|emb|CBI30634.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/146 (73%), Positives = 115/146 (78%), Gaps = 22/146 (15%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA+YRAD+DYDYL+K FSLESKSTIGVEFATRSIRV+DK
Sbjct: 1 MASYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTDSNIV
Sbjct: 39 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 98
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAE 146
IMLVGNKADLRHL A+ D + E
Sbjct: 99 IMLVGNKADLRHLRALCPRDRPSMLE 124
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 160/222 (72%), Gaps = 13/222 (5%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+ DY++KVV+IGDS VGK+ LL RFT++EF ++SKSTIG+EF TR++ + K VKAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVT +F + RWL +LR H D++IV+ML+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---- 183
ADL H AV+ ++A AFAE + FF E SAL NVE AF +L +I+ +VSR++L
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMD 181
Query: 184 DIGGDPAA------LPKGQTINVGGKDDV---SAVKKVGCCN 216
I GD AA + +G +++ + + SA+K+V C+
Sbjct: 182 GINGDAAANANAALMLRGTKLSLSDELSIMETSAIKRVSRCS 223
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 126/156 (80%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL H ++ IV+MLVGNK+DL
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVL 171
V T++A+ FAE F+ETSAL+S NVE AF VL
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/117 (84%), Positives = 112/117 (95%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIML
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
>gi|102139999|gb|ABF70134.1| GTP-binding protein, putative [Musa balbisiana]
Length = 192
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 121/145 (83%), Gaps = 5/145 (3%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLC 134
YRAITSAYYRGAVGALLVYDVTRH TFENV RWL+ELR HTD NI++ML+GNK+DLRHL
Sbjct: 49 YRAITSAYYRGAVGALLVYDVTRHTTFENVSRWLRELRDHTDPNIIVMLIGNKSDLRHLV 108
Query: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPA--AL 192
AV TED KA+AE+E+ +FMETSALE+ NV+NAF EVLTQIYH+VSRKA++ G D A A
Sbjct: 109 AVPTEDGKAYAEKESLYFMETSALEATNVDNAFAEVLTQIYHIVSRKAVEAGDDAASSAP 168
Query: 193 PK-GQTINVGGKDDVSAVKKVGCCN 216
P G+ INV KDD S ++K+ CC+
Sbjct: 169 PSTGERINV--KDDASTMRKLSCCS 191
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 134/175 (76%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+ +YD+L+K++LIGDSGVGK+N+L RF +NEF L+SK TIGVEF+T++I VE+K VK QI
Sbjct: 6 ENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGA + YD+TR +TF N+E+WL E++ + NIVIM++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGN 125
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
K D + V + +A ++ ++ETSA +NVE AF+ ++++I+ +S K
Sbjct: 126 KIDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK 180
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 129/169 (76%), Gaps = 1/169 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQ 65
+ +YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ +++ K KAQ
Sbjct: 4 EHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL + D N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
NK+DL HL VS+ED + +A N F ETS L + N++ AFTE+L+ I
Sbjct: 124 NKSDLTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 129/169 (76%), Gaps = 1/169 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQ 65
D++YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + K+ KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL + D+N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
NK+DL HL V+ ED + +A+ N F ETS L + N++ FTE+L I
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 152/219 (69%), Gaps = 16/219 (7%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +DYDY YK+V+IGDSGVGK+N++++FTR EFS E+K+T+GVEFA + + ++DKI+KA
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
Q+WDTAGQERYRAI S+YY+GA GAL+V+D+T+ TF+NV+RW+K ++ T + I I+LV
Sbjct: 62 QLWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILV 120
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
GNK+DLRHL VS++ + A+A + F+ETSA + NV AF + +++ KAL
Sbjct: 121 GNKSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNK-------LINGKALI 173
Query: 185 IGGDPAALPKGQTINVGGKDD--------VSAVKKVGCC 215
+ + + K +I K + + + K GCC
Sbjct: 174 LNVEIHSKNKNNSIYTQKKTNQQITEAVQIDSQKDSGCC 212
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NI
Sbjct: 2 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYENVERWLKELRDHADANI 61
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
VIMLVGNK+DLRHL AV TE+AKAFAE+ F+ETSAL+S NVE AF +L +IYH+VS
Sbjct: 62 VIMLVGNKSDLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNILEEIYHIVS 121
Query: 180 RKALD-----IGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+K + G P+ QTI V ++ K V CC
Sbjct: 122 QKQIHNASNRTGNQPS--DNVQTIQVAPTVEIDQRKSVKCC 160
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/136 (71%), Positives = 118/136 (86%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAF 144
DL HL AV T++AK F
Sbjct: 129 DLAHLRAVPTDEAKKF 144
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 132/161 (81%)
Query: 14 YKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQE 73
+ VVLIGDS VGK+N+LSRF +EF+L+SK+T+GVEF+ + ++V + I+KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHL 133
RYR+ITSAYYRGAVGAL+VYD+T +FENVE WL ELR H+D ++V++L+GNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 134 CAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
++ST++A+A+AE+ N F+ETSA E ++ AFT VL ++
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 137/178 (76%), Gaps = 2/178 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M+ +E YDYL+ VLIGD+GVGK+N+L+R+ +NEF ++KST+GVEFA++ + +++K
Sbjct: 1 MSTAEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T TF+N+ WL EL ++D+++
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMT 118
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
I+LVGNK DL +L + +++A FAE+ N F+ETSA +S ++ AF +L+ IY +
Sbjct: 119 IVLVGNKCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKA 64
A++ YDYL+K+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ +++ KI KA
Sbjct: 2 AEQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL + D N++I LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALV 121
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL HL V+ ED + +A N F ETS L + N++ F E+L I
Sbjct: 122 GNKSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 141/203 (69%), Gaps = 14/203 (6%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++K+V++GDS VGK+ LL RFTR+EF L+SKSTIG+EF TR++ + VKAQIWDTA
Sbjct: 4 DYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYDVT TF++ RW+ ELR H D +IV+MLVGNKADL
Sbjct: 64 GQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADL 123
Query: 131 RHLCA---VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
V ++A AFAE + FF E SAL NVE AF +L +I+ +VSRK LD
Sbjct: 124 ARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDAAA 183
Query: 188 DPAALPKGQTINVGGKDDVSAVK 210
+ GG DV A+K
Sbjct: 184 ET-----------GGTTDVLALK 195
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 135/187 (72%), Gaps = 3/187 (1%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
EDYD LYK V++GDSG GK+ LL RFTRNEF E KSTIGVEF+++ I+ +D V+ QIW
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRAIT AYYRG++GA++VYDVT+ +FE ++RW EL + D ++V M++GNK
Sbjct: 62 DTAGQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY-HVVSRKALDIG 186
DL + V+TE+A+ FA++ ++F ETSA++ NVE AF +++ I +KA +
Sbjct: 122 CDLEQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAE-- 179
Query: 187 GDPAALP 193
PA P
Sbjct: 180 AKPAQKP 186
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 131/178 (73%), Gaps = 3/178 (1%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+YDYL+K+VLIGDSGVGK+NLLS+ TR EFS E+K+TIGVEFAT++ +++ ++KAQIW
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-WLKELRGHTDSNIVIMLVGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR T N + WL +L+ ++ I IMLVGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGN 121
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
K DL V+ A+ N F+ETSAL+ NVE AF E++ +Y RKALD
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVYR--KRKALD 177
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 144/209 (68%), Gaps = 14/209 (6%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+ DY++KVV+IGDSGVGK+ LL RFTR +F L+SKSTIG+EF TR++ + + VKAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVTR +F + RW+ ELR H D +IV+ LVGNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 128 ADLRHLCAVSTE----DAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
ADL E +A+AFAE + FF E SAL NVE AF +L +I+ VSRK L
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKV 212
+ AA G G DDV +K +
Sbjct: 182 E-----AARGNGD-----GDDDVLVLKGI 200
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 139/207 (67%), Gaps = 8/207 (3%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAG 71
+ +VV+IG+SGVGKSNLL RFTRNE+ E K TIGVEFATR+I + K ++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLR 131
QE+YRAIT AYYRGA GA+ VYDV++ TF ++RW+ EL+ ++VIM+VGNK+DL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 132 HLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDPAA 191
V + + FA+R N+FFMETSAL NVE AFTE+L IY K + P
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIY-----KKKNTTITPEK 195
Query: 192 LPKGQTINVGGKDDV---SAVKKVGCC 215
+ Q +V + ++ S+ +K CC
Sbjct: 196 TAETQKPSVEDRVNINKQSSEEKKKCC 222
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 130/178 (73%), Gaps = 3/178 (1%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E YDYL+K+VLIGDSGVGK+NLLS+ TR EFS E+K+TIGVEFATR+ ++++ ++KAQIW
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-WLKELRGHTDSNIVIMLVGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR T N + WL +L+ ++ I IM+VGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVGN 121
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALD 184
K DL V+ A+ N F+ETSAL+ NVE AF E++ +Y RK LD
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKAVYR--RRKTLD 177
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 12 YLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED-KIVKAQIWDTA 70
Y +K+VL+GDSGVGKSNL+ RFT+NEF+ +SKSTIGVEFAT+++++ED K+VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYR+I S+YYRGAVGALLVYDVT +F +V WLKE+ + + + +IMLVGNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
V D ++FA + F+ETSAL++ V+ AF +L +IY ++K
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +SN+ IML+GNKAD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKAD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FMETSA + NVE AF ++I+ + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKIEEGVFDVSNEA 182
Query: 190 AALPKGQTIN-VGGKDDVSAVKKVGCCN 216
+ + G N G + D S + GCC+
Sbjct: 183 SGIKIGVLPNHPGHRGDSSGPQSGGCCS 210
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 96/142 (67%), Positives = 114/142 (80%), Gaps = 6/142 (4%)
Query: 57 VEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD 116
V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D
Sbjct: 6 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 65
Query: 117 SNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
NIVIMLVGNK+DLRHL AV T++AK FAER F+ETSAL+S NVE AF +LT+IY
Sbjct: 66 QNIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYR 125
Query: 177 VVSRKALDIGGDPAALPKGQTI 198
+VS+K + DP P+G I
Sbjct: 126 IVSQKQIR---DP---PEGSVI 141
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+ + +K+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S++++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV----SRKAL 183
DL HL V E A FA F+ETSALE NV+ AF + +Y VV +R+A
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVVVTPQTREA- 180
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D A +G+T+N+ + A K GCC
Sbjct: 181 ----DRTAPKQGRTVNMNPSESPEAKKSSGCC 208
>gi|413950279|gb|AFW82928.1| ras protein Rab11C [Zea mays]
Length = 182
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 4/165 (2%)
Query: 56 RVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHT 115
+VE KI+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELR H
Sbjct: 19 QVEGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHA 78
Query: 116 DSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSN IMLVGNK DLRHL AV+T+DA++FAE E ++ETSALE+ NVE AF +L IY
Sbjct: 79 DSNTRIMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIY 138
Query: 176 HVVSRKAL---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
VS+K + ++G + +G+TI+V D +A KK CC+A
Sbjct: 139 RAVSKKPVASDEVGAGQGGVKEGKTIDVATGADAAAHKK-QCCSA 182
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 138/212 (65%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+ + +K+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S+++E + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIESRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV----SRKAL 183
DL HL V E A FA F+ETSALE NV+ AF + +Y VV +R+A
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVVVTPQTREA- 180
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D A +G+T+N+ + A K GCC
Sbjct: 181 ----DRTAPKQGRTVNMNPSESQEAKKSGGCC 208
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 124/168 (73%), Gaps = 7/168 (4%)
Query: 53 RSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR 112
R I VE K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 113 GHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
H DSNIVIM+ GNKADL HL +V+ ED + AE E F+ETSALE+ NVE AF VL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 173 QIYHVVSRK---ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+IYH++S+K A + +A+P +G TINVG D S K GCC+
Sbjct: 122 EIYHIISKKALAAQEAAAANSAIPGQGTTINVG---DTSGAGKRGCCS 166
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 135/180 (75%), Gaps = 3/180 (1%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+YDYL K+V+IGDSGVGKSNLLSR+ +NEFS+ STIGVEF+T+++++++K++K Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQE+Y +IT +YY+GA+GAL+VY++ +F N+E+WLK+ R + + IMLVGNK+
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK---ALDI 185
DL+ VST + K FAE+ F+ETSAL+S NVE AF + IY+ + + LDI
Sbjct: 127 DLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFKNKTMTLDI 186
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 125/164 (76%), Gaps = 5/164 (3%)
Query: 56 RVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHT 115
+VE K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELR H
Sbjct: 6 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 65
Query: 116 DSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSNIV+ML+GNK DL+HL +VS EDA +FAERE F+ETSAL++ NV+ AF VLT+IY
Sbjct: 66 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 125
Query: 176 HVVSRK---ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
++S+K A + G A+ +GQ+I V D S + CC+
Sbjct: 126 RIISKKALAADEAGAGAGAVREGQSIQVSATDSSSFTSR--CCS 167
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
E+ + +K+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S++++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV----SRKAL 183
DL HL V E A FA F+ETSALE NV+ AF + +Y VV +R+A
Sbjct: 122 CDLEHLRVVKKEAADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVVVTPQTREA- 180
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D A +G+T+N+ + K GCC
Sbjct: 181 ----DRTAPKQGRTVNMNPSESPETKKTSGCC 208
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/113 (84%), Positives = 107/113 (94%), Gaps = 1/113 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
WDTAGQERYRAITSAYYRGA GALLVYD+ +H+T+ENVERWLKELR H D+NI
Sbjct: 65 WDTAGQERYRAITSAYYRGA-GALLVYDIAKHLTYENVERWLKELRDHADNNI 116
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 13/220 (5%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
+ DY++KVV++GD+ VGK+ LL+RF R+EF+L+SK TIGVEF TR++ + K VK QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYDVTR TFE+V RW++ELR H D + V+ L+GNKA
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 129 DLRHL-CAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI-- 185
D+ V ++A AE + FF E SAL NVE AF +L +++ VSR+AL++
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 186 ----------GGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
GG KG ++VG + SA+K+ C
Sbjct: 206 ARRMRGDQGDGGGEVLSLKGTAVDVGSIMETSAMKRSSQC 245
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 13/217 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+EDYD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R I + K +KAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQE++RAIT YYRGA+GA++ YD+T+ +F NVERW++ELR H DSN+V+ML+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY--------HVV 178
K+DL V ED A + N F+ETSAL++ NV AF+ +L +IY
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIYVGIDNQGKEYQ 183
Query: 179 SRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
R ++ + +P + Q K D + KK CC
Sbjct: 184 KRASIKLTSEPITIKNAQNT----KPDTTKSKK-QCC 215
>gi|154333217|ref|XP_001562869.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059874|emb|CAM37302.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 208
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 135/212 (63%), Gaps = 9/212 (4%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
ED + +K+VLIGDSGVGKSNL++R+T +EFS E+ STIGVEF T+SI++ED+ K QIW
Sbjct: 2 EDTNLSFKIVLIGDSGVGKSNLMTRYTMSEFSQETPSTIGVEFMTKSIKIEDRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPVTCCIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV----SRKAL 183
DL HL V E A FA F+ETSALE NV+ AF + +Y VV +R+A
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVVVTPQTREA- 180
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G+T+N+ + K GCC
Sbjct: 181 ----DRTVPKPGRTVNMNPGETSEVKKSGGCC 208
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 92/158 (58%), Positives = 123/158 (77%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRA 77
L DSGVGKS L+SRFT+++FS+E + TIGVEF+T++I++ DKI+KAQIWDTAGQERYRA
Sbjct: 1104 LACDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 1163
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVS 137
ITSAYYRGA GAL+V+D+T+ +FEN+ +W KEL+ H+D IV ML+GNK DL +S
Sbjct: 1164 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNIS 1223
Query: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
+ A FA+ + ++ETSAL S NVE AF +++ IY
Sbjct: 1224 KDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 1261
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 126/186 (67%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I + DK VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF+++ RWL+E R H+ SN+VIML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKND 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ KAFA++ FMETSA + NVE AF +I+ + +D+ +
Sbjct: 123 LEHRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGKIDVSNES 182
Query: 190 AALPKG 195
+ G
Sbjct: 183 FGIKVG 188
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 13/214 (6%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +++Y+YLYK+VLIGDSGVGK+NLL R N F+ +KSTIGVEF T+ V K +KA
Sbjct: 7 REEQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKA 66
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRGHTDSNIVIML 123
QIWDTAGQERYRAITSAYYRGAVGA++VYD++R TF+N W+K+L+ +++S +VI L
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISL 126
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK DL VS ++A+ A+ ETSAL +NV+ AF ++ +IY +
Sbjct: 127 VGNKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIYQTRA---- 182
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVG--CC 215
G+ + PK IN+ +D +A+K CC
Sbjct: 183 ---GERHSAPKQDIINL---EDDAAMKASNSWCC 210
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 142/211 (67%), Gaps = 6/211 (2%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+K+VL+GD GVGK+ + +R+T +EF+ +SKSTIGVEFA +++ + +K QIWDT
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
+G+ERYRAITSAYYRG+VGA+LV+DVT+ +FE++E W +LR + D NIV+ +VGNK D
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKID 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L VST +A+ FA F+METSAL+ VENAF +V +I+ +V +
Sbjct: 123 LPTR-EVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQARKKTV 181
Query: 190 AALPKGQT--INVGGKDDV---SAVKKVGCC 215
A GQT I +G D+V S CC
Sbjct: 182 RASSIGQTRSIKLGEADEVAKPSIFSSSDCC 212
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 40 LESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHV 99
LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERYRAITSAY GAVGALLVYD+++
Sbjct: 12 LESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISKQT 70
Query: 100 TFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALE 159
TFEN++RWLKELR H DSNIVIMLVGNK+DLRHL AVST+D K F+ F+ETSAL+
Sbjct: 71 TFENIQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTDDGKNFSTTNGLSFIETSALD 130
Query: 160 SMNVENAFTEVL 171
S NV+ AF ++L
Sbjct: 131 STNVDCAFQDIL 142
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 20/219 (9%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R + DY++KVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++
Sbjct: 30 AERPLQKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLI 89
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIM
Sbjct: 90 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIM 149
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL V T+ FF+ +I VVS+++
Sbjct: 150 LIGNKGDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRS 193
Query: 183 LDI--GGDPAALPKGQTINV--GGKDDVSAVKKVGCCNA 217
L+ G + A KG I++ G + D++ +K+V C+
Sbjct: 194 LESNNGKNNIATLKGSKIDIISGPELDITEMKEVPSCSC 232
>gi|194744897|ref|XP_001954929.1| GF16497 [Drosophila ananassae]
gi|190627966|gb|EDV43490.1| GF16497 [Drosophila ananassae]
Length = 166
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 120/164 (73%), Gaps = 12/164 (7%)
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSN 118
D + KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D N
Sbjct: 9 DYLFKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 68
Query: 119 IVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVV 178
IVIMLVGNK+DLRHL +V T++AK FAER F+ETSAL+S NVE AF +LT+IY +V
Sbjct: 69 IVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIV 128
Query: 179 SRKALDIGGDPAALPKGQTIN------VGGKDDVSAVKKVGCCN 216
S+K + DP P+G I + K V+A + CC
Sbjct: 129 SQKQI---RDP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 166
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 102/107 (95%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVI+
Sbjct: 71 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVII 117
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 143/214 (66%), Gaps = 13/214 (6%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R +++Y+YLYK+VLIGDS VGK+NLL R N F+ +KSTIGVEF T+ V K +KA
Sbjct: 3 REEQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRGHTDSNIVIML 123
QIWDTAGQERYRAITSAYYRGAVGA++VYD+TR +F+N W+K+L+ +++S +VI L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISL 122
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL 183
VGNK DL VS ++A+ A+ + ETSAL +NV+ AF ++ +IY +R A
Sbjct: 123 VGNKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQ--TRTAE 180
Query: 184 DIGGDPAALPKGQTINVGGKDDVSAVKKVG--CC 215
G PK IN+ +D S++K CC
Sbjct: 181 RNNG-----PKPSIINL---EDDSSMKASSSWCC 206
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 134/208 (64%), Gaps = 2/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +E+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ RWL+E R +++SN+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVS ++ + FA+ F+ETSA + NVE+AF + ++IY + D+ +
Sbjct: 123 LEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEA 182
Query: 190 AALPKGQT--INVGGKDDVSAVKKVGCC 215
+ G T GG + + GCC
Sbjct: 183 HGIKVGMTGSPGPGGFGNSNPPANRGCC 210
>gi|300122550|emb|CBK23119.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 131/209 (62%), Gaps = 3/209 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I + + +K QIWDT
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIGENQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF + +WL E R + SN+VIML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFTQLTKWLTEARENGSSNMVIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H VSTE+ + FAE F+ETSA + NVE AF + +IYH + +D+ +
Sbjct: 123 LNHRRTVSTEEGEKFAEENGLIFLETSAKTAANVEEAFVKTAEKIYHNIETGVIDVSNES 182
Query: 190 AALPKGQTINVGGKDDVSA---VKKVGCC 215
+ GQ+ V G +A + GCC
Sbjct: 183 NGVKVGQSDAVKGLQAPNAGAGQAQGGCC 211
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 134/208 (64%), Gaps = 2/208 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +E+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ RWL+E R +++SN+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVS ++ + FA+ F+ETSA + NVE+AF + ++IY + D+ +
Sbjct: 123 LEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEA 182
Query: 190 AALPKGQT--INVGGKDDVSAVKKVGCC 215
+ G T GG + + GCC
Sbjct: 183 HGIKVGMTGSPGPGGFGNSNPPASRGCC 210
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 131/206 (63%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F + TIGVEF R + ++D+ VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYDVTR TF ++ RWL+E R + ++ +V+ML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVST++ FA R FMETSA + NVE AF + +IY + + D+ D
Sbjct: 123 LEHRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTNDS 182
Query: 190 AALPKGQTINVGGKDDVSAVKKVGCC 215
+ G + +A GCC
Sbjct: 183 HGIKVGAHSSSAASVPGAASGTAGCC 208
>gi|413948486|gb|AFW81135.1| hypothetical protein ZEAMMB73_478467 [Zea mays]
Length = 110
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 101/110 (91%)
Query: 108 LKELRGHTDSNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAF 167
++ELR HTD+NIVIMLVGNKADLRHL AV TEDAKAFAEREN FFMETSALE+MNVE AF
Sbjct: 1 MRELRDHTDANIVIMLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAF 60
Query: 168 TEVLTQIYHVVSRKALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
TEVLTQIYHVVS+KALDIG DPAA P+GQTI+VGGKDDVSAVKK CC++
Sbjct: 61 TEVLTQIYHVVSKKALDIGDDPAAPPRGQTISVGGKDDVSAVKKSACCSS 110
>gi|145525673|ref|XP_001448653.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834495|emb|CAI44562.1| rab_A44 [Paramecium tetraurelia]
gi|124416208|emb|CAK81256.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 138/205 (67%), Gaps = 12/205 (5%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++++ YL+K++LIGDSGVGK+NL +R EF +++ TIGVEF R++R + +VK QI
Sbjct: 3 EDEFSYLFKIILIGDSGVGKTNLFNRLQNKEFQYDTRPTIGVEFINRTVRQDGNLVKCQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQE++RAIT+AYYRGA G + YDVT+ T+E+ RW+ E++ D +IVIMLVGN
Sbjct: 63 WDTAGQEKFRAITNAYYRGAKGVFVCYDVTKQGTYESTLRWMSEIKQFGDHDIVIMLVGN 122
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL V T++ F E+ ++ETSAL ++NVE AF +++T+IY +VS
Sbjct: 123 KIDLAEQRIVRTDEVSQFCEQNKVGYIETSALNNINVEMAFNQMVTEIYKIVS------- 175
Query: 187 GDPAALPKGQTINVGGKDDVSAVKK 211
A P QT+ G +DV ++K
Sbjct: 176 ---AQKPISQTL--LGINDVYVLRK 195
>gi|367060765|gb|AEX11197.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060767|gb|AEX11198.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060769|gb|AEX11199.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060771|gb|AEX11200.1| hypothetical protein 0_12402_01 [Pinus taeda]
Length = 136
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 115/137 (83%), Gaps = 3/137 (2%)
Query: 81 AYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADLRHLCAVSTED 140
AYYRGAVGALLVYD+TRHVTFENVERW KEL+ HTD NIV+MLVGNK+DL HL AVS E+
Sbjct: 1 AYYRGAVGALLVYDITRHVTFENVERWYKELKDHTDVNIVVMLVGNKSDLLHLRAVSVEE 60
Query: 141 AKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP-AALP-KGQTI 198
K+FAERE+ +FMETSAL+S NVEN+FT+VLTQIY +VS+++LD + + LP KGQ+I
Sbjct: 61 GKSFAERESLYFMETSALDSTNVENSFTQVLTQIYRIVSKRSLDTAEEALSTLPGKGQSI 120
Query: 199 NVGGKDDVSAVKKVGCC 215
+V GKD+ + KK GCC
Sbjct: 121 SVNGKDEFTT-KKAGCC 136
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I + +K +K QIWDT
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +SN+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ FA+ FMETSA + NVE AF +IY + D+ +
Sbjct: 123 LDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQKIEEGIFDVSNET 182
Query: 190 AALP----KGQTINVGGKDDVSAVKKVGCCN 216
+ + G ++D +A + GCCN
Sbjct: 183 SGIKVGYGGGAGTAGSVRNDYTAPQSSGCCN 213
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQ---TINVGGKDDVSAVKKVGCCN 216
+ G + GG+D SA + GCC+
Sbjct: 183 YGIKVGYGGIPGSSGGRDGASA-QAGGCCS 211
>gi|340500662|gb|EGR27525.1| Ras-related protein ric2, putative [Ichthyophthirius multifiliis]
Length = 235
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 138/206 (66%), Gaps = 9/206 (4%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL K+VL+GDSGVGKSN+LSRFTR++F +++ STIGVEF R I E+KI++ QIWDT
Sbjct: 34 YDYLIKIVLVGDSGVGKSNILSRFTRDQFQIDNCSTIGVEFGQRIITTENKIIQTQIWDT 93
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AG E++++IT ++RGA+G LL+YD+T+ +F+ E+ ++++ + + + I+LVGNK D
Sbjct: 94 AGTEKFQSITQQFFRGALGVLLIYDITKQASFQQCEKLFQQIKDNVEDHTQILLVGNKTD 153
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
+ +L VS ++ FA+ F+E SALE++N++ AF V+ QIY + + + + D
Sbjct: 154 ISNLRTVSKQEGLEFAKTHKIQFIEVSALENINIDQAFMIVVQQIYELCQKSYVTVETDK 213
Query: 190 AALPKGQTINVGGKDDVSAVKKVGCC 215
+ KD+V +K CC
Sbjct: 214 K---------IQLKDNVDKIKIAHCC 230
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+K ++IGD+GVGKS LL +FT F TIGVEF R + ++ + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVS E+ + FA+ F+E SA + NVE AF + +I + D+ +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSNES 182
Query: 190 AALPKGQTINVGGKDDVSAVKKVGCCN 216
+ + G G D + ++ GCCN
Sbjct: 183 SGIKVGYGRPQGPSGDGTVSQRGGCCN 209
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 130/209 (62%), Gaps = 3/209 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +E K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+VIML+GNK+D
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L V E+ +AFA+ FMETSA + NVE+AF +IY + DI +
Sbjct: 123 LEGRREVKKEEGEAFAQEHGLVFMETSAKTADNVEDAFINTAKEIYDKIQDGVFDINNEA 182
Query: 190 AAL---PKGQTINVGGKDDVSAVKKVGCC 215
+ P+ + GG + + GCC
Sbjct: 183 NGIKIGPQQANTSPGGGNPSGNTQSGGCC 211
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT N F TIGVEF R I +E+K +K QIWDT
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + I+ + D+ +
Sbjct: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVG--GKDDVSAVKKVGCCN 216
+ G G G + S+ + GCC+
Sbjct: 183 YGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSNES 182
Query: 190 AALPKGQTINVG--GKDDVSAVKKVGCCN 216
+ G G G D S+ + GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
>gi|71410719|ref|XP_807641.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70871685|gb|EAN85790.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 135/216 (62%), Gaps = 8/216 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
ED + +KVV+IGDSGVGKSNL++R+T NEFS ++ +TIGVEF T+SI++E + K QIW
Sbjct: 2 EDTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL HL V E A FA F+ETSALE NVE AF + +Y +V GG
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLVVAPVDAAGG 181
Query: 188 --DP--AALPKGQTINVGGKDDVSAVKK----VGCC 215
P AA + +N+G +D A K CC
Sbjct: 182 RRPPLNAAANAKRPVNLGASNDGQAAGKKENTSRCC 217
>gi|407867485|gb|EKG08588.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 217
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 136/216 (62%), Gaps = 8/216 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
ED + +KVV+IGDSGVGKSNL++R+T NEFS ++ +TIGVEF T+SI++E + K QIW
Sbjct: 2 EDTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNK 121
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGG 187
DL HL V E A FA F+ETSALE NVE AF + +Y +V GG
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLVVAPVDAAGG 181
Query: 188 --DP--AALPKGQTINVGGKDDVSAVKK---VG-CC 215
P AA + +N+G +D A K G CC
Sbjct: 182 RRPPLNAAANAKRPVNLGASNDGQAAGKKENTGRCC 217
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQ---TINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAG-GCCS 211
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQ---TINVGGKDDVSAVKKVGCCN 216
+ G GG+D +A + GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGATA-QSGGCCS 211
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVG--GKDDVSAVKKVGCCN 216
+ G G G D +A + GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGAASQGGGCCS 211
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA + GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGGSA-QAGGCCS 211
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAG-GCCS 211
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTTQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSAAGG-GCCS 211
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSAAGG-GCCS 211
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL+ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEHARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQ---TINVGGKDDVSAVKKVGCCN 216
+ G GG+D SA GCC+
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAG-GCCS 211
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta CCMP2712]
Length = 207
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 3/207 (1%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMTIMLIGNKSD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AV+ + +AFA F+ETSA + NVE AF QIY + D+ +
Sbjct: 123 LEHRRAVTYAEGEAFARENGLIFLETSAKTAHNVEEAFVNTAKQIYAKIQEGVFDVTNES 182
Query: 190 AALPKGQT-INVGGKDDVSAVKKVGCC 215
+ G T N G D +K GCC
Sbjct: 183 FGIRVGVTSPNQGSGGD--GQRKGGCC 207
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I +++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVSTE+ + FA+ FME SA + NVE AF + IY + D+ +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVG--GKDDVSAVKKVGCCN 216
+ G G G D S + GCC
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 10/212 (4%)
Query: 10 YDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDT 69
YDYL+K ++IGD+GVGKS LL +FT F TIGVEF R + ++ + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNKAD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122
Query: 130 LRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGDP 189
L H AVS E+ + FA+ F+E SA + NVE AF + +I + D+ +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182
Query: 190 AAL------PKGQTINVGGKDDVSAVKKVGCC 215
+ + P+G + G D + ++ GCC
Sbjct: 183 SGIKVGYGRPQGPS----GARDGTVAQRGGCC 210
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 140/222 (63%), Gaps = 13/222 (5%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVE------- 58
A + DYL K+V++GDSGVGKSN++SRFT + F SK+TIGV FAT+++ VE
Sbjct: 5 ASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDSTK 64
Query: 59 --DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTD 116
K VK Q+WDTAGQERYRA++SAYYRGA GAL+VYD+T + +++ +WL+E+ +
Sbjct: 65 DCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYCT 124
Query: 117 SNIVIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYH 176
++V+ LVGNK DL VS E+ K A REN FF+ETSA ++ N+E AFT ++ +I
Sbjct: 125 QDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIKEIIQ 184
Query: 177 VVSRKALDIGGDPAALPKGQTINVGGKD----DVSAVKKVGC 214
+A + G P I + + D +A + GC
Sbjct: 185 SNLSQANNDGKIAGKAPSDTGITLKPPEEPESDPNAPPQPGC 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,121,835,417
Number of Sequences: 23463169
Number of extensions: 113453159
Number of successful extensions: 558220
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16208
Number of HSP's successfully gapped in prelim test: 8452
Number of HSP's that attempted gapping in prelim test: 521169
Number of HSP's gapped (non-prelim): 25566
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)