BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027894
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 209/216 (96%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD++YDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V+DK
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IM VGNKADLRHL AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVL+QIY VVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCN 216
KALDIG DPAALPKGQTINVG KDDVSAVKKVGCC+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCS 216
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/217 (88%), Positives = 206/217 (94%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MAAYRAD+DYD+LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI V++K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HT++NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALE++NVENAFTEVL+QIY V S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALDIG D LPKGQ+INVG KDDVS VKKVGCC++
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/216 (88%), Positives = 207/216 (95%), Gaps = 1/216 (0%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
YRA++DYDYL+K+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRV+DKI
Sbjct: 3 GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELR HTD NIVI
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNKADLRHL AVSTEDAKAFAERENTFFMETSALES+NVENAFTEVLT+IY VV RK
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182
Query: 182 ALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
AL++G DPAALPKGQTINV GKDDVSAVKKVGCC++
Sbjct: 183 ALEVGDDPAALPKGQTINV-GKDDVSAVKKVGCCSS 217
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/218 (84%), Positives = 205/218 (94%), Gaps = 1/218 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRA++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ +DK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL A+STE+AKAFAERENTFFMETSALE++NV+NAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCCNA 217
KAL+ G DP ALPKGQ INVGG+DD+SAVKK GCC+A
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 198/216 (91%), Gaps = 1/216 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M Y+A++DYDYL+KVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+V+DK
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADL HL A+STE+ K FAERENTFFMETSALE++NVENAFTEVLTQIY VVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180
Query: 181 KALDIGGDP-AALPKGQTINVGGKDDVSAVKKVGCC 215
KALD G DP ALPKGQ INVG +DDVSAVKK GCC
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCC 216
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 200/217 (92%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M AYRAD+DYDYL+K+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ V++K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELR HTD+N+V
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNKADLRHL AV TE+A++F+EREN FFMETSAL++ NVE AFT VLTQIY V+SR
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
KALD GDP +LPKGQTI++G KDDV+AVK GCC+
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCSG 217
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 359 bits (921), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 194/217 (89%), Gaps = 5/217 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ V +K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE E+ +FMETSALES NVENAF+EVLTQIYHVVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ G D +P KG+ I+V DVSAVKK GCC+
Sbjct: 181 KAMEAGEDSGNVPSKGEKIDV----DVSAVKKTGCCS 213
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 353 bits (906), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 194/217 (89%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ V+DK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVE WLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TEDAK+FAE+E+ +FMETSALE+ NVENAF EVLTQI+H+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
KA++ + A +P KG I++G DVSAVKK GCC+
Sbjct: 181 KAMEAASESANVPSKGDKIDIG--KDVSAVKKGGCCS 215
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 352 bits (904), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 194/217 (89%), Gaps = 3/217 (1%)
Query: 2 AAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKI 61
A YRA++DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++V+ K+
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELR HTD NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK 181
MLVGNK+DLRHL AV T++ KAFAERE+ +FMETSALES NVENAF EVLTQIY +VS++
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
+++ G D + P KG+ IN+ KDDVSAVKK GCC+
Sbjct: 183 SVEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCSG 217
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRADE+YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT++ +VE K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELRGHTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK DLRHL AV TE+AKAFAERE+ +FMETSAL++ NVENAFTEVLTQI+ +VS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 181 KALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+++D GG+ A LP KG+TINV K+D S +K++GCC+
Sbjct: 181 RSVDGGGESADLPGKGETINV--KEDGSVLKRMGCCS 215
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 342 bits (878), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YRAD++YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ +++K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVT+ENV RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AVST++AK AERE +FMETSALE+ NVENAFTE LTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 KALDIGGDPA---ALPKGQTINVGGKDDVSAVKKVGCCNA 217
KA++ G + A A PKG+TIN+ KD+ S+ KK GCC++
Sbjct: 181 KAVEAGDEGATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 337 bits (865), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 190/219 (86%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M YR D++YDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+++ V+ K
Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELR HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAFTEVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 181 KALDIG--GDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G G + LP KGQTINV K+D S +K+ GCC+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINV--KEDSSVLKRFGCCS 217
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 336 bits (861), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA YR ++DYDYL+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL+ HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+MLVGNK+DLRHL AV TED K++AE+E+ FMETSALE+ NVE+AF EVLTQIY + S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALDIGGD-PAALPKGQTINVGGKDDVSAVKKVGCCN 216
K ++ G D A++PKG+ I V K+DVSA+KK+GCC+
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCS 215
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 326 bits (836), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 188/219 (85%), Gaps = 5/219 (2%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
MA Y+AD++YDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ ++ K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELR HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
+ML+GNK+DLRHL VSTED KAFAE+E+ +FMETSALE+ NVENAF+EVLTQIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALDIGGDPAA--LP-KGQTINVGGKDDVSAVKKVGCCN 216
+A++ G P+ +P +GQTINV +D S + + CC+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINV--NEDSSVLNRYRCCS 217
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 310 bits (794), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 178/215 (82%), Gaps = 1/215 (0%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
+++ D+DYDYL+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+V+ K +
Sbjct: 2 SHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
LVGNK+DL+HL V TE A+AF ERE F+ETSALES NVE AF ++LT+IYH+VS+K
Sbjct: 122 LVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKV 181
Query: 183 LDIGGDPAALPKGQ-TINVGGKDDVSAVKKVGCCN 216
LD + + +G+ I + D KK GCC+
Sbjct: 182 LDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 303 bits (777), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 177/215 (82%), Gaps = 4/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL+HL AVS ED +A AE+E F+ETSALE++N+E AF +LT+IYH++S+KA
Sbjct: 122 MAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L + LP +G TINV D SA ++ CC+
Sbjct: 182 LAAQEASSNLPGQGTTINVA---DASANQRRSCCS 213
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 303 bits (775), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 180/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R DE+YDYL+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++VE + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
L+GNK DL+HL AV+TEDA+++AE+E F+ETSALE++NVE AF +L+++Y ++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKS 181
Query: 183 L--DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+ D A + +GQTI+V + +A K CC++
Sbjct: 182 ISSDQTTANANIKEGQTIDVAATSESNAKKP--CCSS 216
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 297 bits (760), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL AVS +D A +E+E F+ETSALE+ N+E AF +LT+IYH+VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LDI--GGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L A++P +G TINV D S K GCC+
Sbjct: 182 LAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKA 182
+ GNK+DL HL +V+ ED ++ AE+E F+ETSALE+ N+E AF +L++IYH++S+KA
Sbjct: 122 MAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKA 181
Query: 183 LDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
L LP +G IN+ D SA + GCC+
Sbjct: 182 LAAQEAAGNLPGQGTAINI---SDSSATNRKGCCS 213
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 173/214 (80%), Gaps = 8/214 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCC 215
D AA + I+V D K+ CC
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 174/216 (80%), Gaps = 8/216 (3%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 187 GDPAALPKGQ-----TINVGGKDDVSAVKKVGCCNA 217
D AA + I+V D K+ CC +
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 217
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 294 bits (753), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + K+ CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCC 213
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 294 bits (753), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 GDPAALPKGQT--INVGGKDDVSAVKKVGCC 215
P I+V D K+ CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 167/209 (79%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
D++YDYL+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+V+ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELR H DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K+DLRHL AV T++A+AFAE+ F+ETSAL+ NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 GDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ P + + KV CC
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 287 bits (735), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 174/218 (79%), Gaps = 7/218 (3%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A+R ++DYDYL+K+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
+ GNKADL HL +V+ ED + AE E F+ETSALE+ NVE AF VL +IYH++S+K
Sbjct: 122 MAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 182 --ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A + +A+P +G TINV +D S K GCC+
Sbjct: 182 LAAQEAAAANSAIPGQGTTINV---EDTSGAGKRGCCS 216
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 283 bits (725), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 174/218 (79%), Gaps = 7/218 (3%)
Query: 4 YRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVK 63
+R D++YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ +VE K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H DSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 VGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK-- 181
GNK+DL HL +V+ ED ++ AE+E F+ETSALE+ NVE AF +L +IYH++S+K
Sbjct: 123 AGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL 182
Query: 182 -ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A + +A+P +G TINV DD S K CC++
Sbjct: 183 AAQEAAAANSAIPGQGTTINV---DDTSGGAKRACCSS 217
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 283 bits (724), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 173/217 (79%), Gaps = 6/217 (2%)
Query: 3 AYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIV 62
A R D +YDYL+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE K V
Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELR H DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVII 121
Query: 123 LVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK- 181
L GNK+DL+HL AVS +D +A ++E F+ETSALE++NV+ AF +LT IYH++S+K
Sbjct: 122 LAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKA 181
Query: 182 -ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCN 216
A ALP +G TINV D SA K GCC+
Sbjct: 182 LAAQEAAASTALPGQGTTINVS---DNSANVKRGCCS 215
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 280 bits (717), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 166/215 (77%), Gaps = 1/215 (0%)
Query: 1 MAAYRADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDK 60
M + + E+YDYLYK+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ E K
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIV 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERW+ ELR + D NI
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 121 IMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSR 180
IMLVGNK+DLRHL VST++AK F+E+ F+ETSAL+S NVE AF +LTQIYH++SR
Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR 180
Query: 181 KALDIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ G +TI + + A K GCC
Sbjct: 181 PSHSTGPQTTIDSNTETIILPTTSEPPAAKS-GCC 214
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 280 bits (716), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
+++YDYL+K VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I +++K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL HL AVSTE+A+AFA N F+ETSA+++ NVE AF VLT+I+ +VS ++L+ G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG 183
Query: 187 GDPAALPKGQTINVGGK-DDVSAVKKVG-CC 215
D GQT+N+ +D++ K CC
Sbjct: 184 DDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 174/217 (80%), Gaps = 7/217 (3%)
Query: 5 RADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKA 64
R D +Y YL+K+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S+++E K +KA
Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR H DS+IVIM+V
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
Query: 125 GNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRK--- 181
GNK+DL HL AVS ++ KA AE+E FF+ETSA+E++NVE AF ++T++Y +V+RK
Sbjct: 124 GNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALA 183
Query: 182 ALDIGGDPAALP-KGQTINVGGKDDVSAVKKVGCCNA 217
A + A LP +G+TI++ D + K CC+A
Sbjct: 184 AKEAAAASAPLPSQGKTISI---DSAAGNTKRACCSA 217
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 274 bits (700), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 166/214 (77%), Gaps = 8/214 (3%)
Query: 8 EDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIW 67
+ DY++KVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ ++ + VKAQIW
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 ADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL---- 183
+DL L V TEDAK FAEREN FFMETSALES NVENAF VLT+IY +VS+K L
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 --DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
D G+ ++L KG I V G++ K CC
Sbjct: 193 EVDSSGN-SSLLKGTKIVVPGQEPAPPT-KASCC 224
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 273 bits (699), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 170/215 (79%), Gaps = 9/215 (4%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGKS LL+RF+RNEFS+ESK+TIGVEF TR++ ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL--- 183
K DL L AV TEDAK FA+REN FFMETSAL+S NVE +F VLT+IY +VS+K L
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCC 215
+ GGD ++L +G I V G++ S K GCC
Sbjct: 189 EEGESGGD-SSLLQGTKIVVAGEETESKGK--GCC 220
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 166/217 (76%), Gaps = 6/217 (2%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A+ DY++KVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ ++ K VKAQ
Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDI 185
NK DL + V TEDAK FAE+E FF+ETSALE+ NVE+AFT VLT+IY++V++K+L
Sbjct: 130 NKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA 189
Query: 186 -----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+ A+L GQ I + G K+ CC A
Sbjct: 190 DESQGNGNSASL-SGQKIIIPGPAQEIPAKRNMCCQA 225
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 167/217 (76%), Gaps = 7/217 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL AV TEDAK FA++E FF+ETSA+E+ N+E+AF VLT+I+++V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+PA+L G+ I V G V KK CC++
Sbjct: 188 DDNQSNGNPASL-TGKKILVPGPGQVIPEKK-ACCSS 222
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 167/213 (78%), Gaps = 6/213 (2%)
Query: 7 DEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQI 66
++ DY++KVVLIGDS VGK+ LL+RF RNEFS++SK+TIGVEF T+++ +++K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELRGH D NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 128
Query: 127 KADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG 186
K DL L AV TEDA+ FA+REN FFMETSALE+ NVE AF +LT+IY ++S+K+L
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 188
Query: 187 GDPA----ALPKGQTINVGGKDDVSAVKKVGCC 215
D A +L KG I + + + K+ GCC
Sbjct: 189 DDDADGNSSLLKGTRIIIPSEQESG--KRGGCC 219
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 262 bits (670), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 160/210 (76%), Gaps = 4/210 (1%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ +E K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD-- 188
AV TEDAK FAE+E FF+ETSAL + NVEN+F ++TQIY+ V++K L GD
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 -PAALPKGQTINVGGKDDVSAVKKVGCCNA 217
P +L G+ I + G K CC +
Sbjct: 195 NPGSLA-GKKILIPGSGQEIPAKTSTCCTS 223
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 256 bits (655), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 164/217 (75%), Gaps = 7/217 (3%)
Query: 6 ADEDYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQ 65
A + DY++KVVLIGDS VGK+ +L+RF RNEFSL+SK+TIGVEF TR++ ++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTG 127
Query: 126 NKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKAL-- 183
NK DL AV TEDAK FA++E FF+ETSA+E+ +E+AF VLT+I+++V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---DIGGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
+PA+L G+ I V G V KK CC++
Sbjct: 188 DENQSNSNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 256 bits (654), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 5/212 (2%)
Query: 11 DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWDTA 70
DY++KVVLIGDS VGKS +L+R+ R+EFSL+SK+TIGVEF TR++ ++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TF+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG---- 186
A+ TEDAK FAE+E FF+ETSA + NVE+AF+ VLT+I+++V++K+L
Sbjct: 135 VDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQE 194
Query: 187 -GDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
G+P +L + V G V K CCN+
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>sp|P51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
Length = 222
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYDYL+K+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I VE+K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIGGD 188
DL HL AV T++AK FA F ETSAL S NV+ AF E++ I+ +VS+ +D+ G
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 ------PAALPKGQTINV--GGKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 152/199 (76%), Gaps = 7/199 (3%)
Query: 9 DYDYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVEDKIVKAQIWD 68
DYD L+K+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVSRKALDIG-- 186
DL HL AV TE++K FA+ F ETSAL S NV+ AF E++ IY VS+ +D+G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -----GDPAALPKGQTINV 200
+ A+ P G TI++
Sbjct: 189 SANGNANGASAPNGPTISL 207
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MAAYRADEDY-DYLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVED 59
MA Y D+ DYL+K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLCAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYHVVS 179
V +LVGNK+DL+ L VST + KA AE + FFMETSAL+S NV AF V+ +IY+++S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALDI----GGDPAALPKGQTINVGGKDDVSAVKKVGCCNA 217
RK + DPA+L G+ + V D KK GCC++
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKV-VIPSDGQGEFKKGGCCSS 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,664,768
Number of Sequences: 539616
Number of extensions: 2779791
Number of successful extensions: 17145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 15139
Number of HSP's gapped (non-prelim): 1355
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)