BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027895
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C0ZIY1|PSUG_BREBN Pseudouridine-5'-phosphate glycosidase OS=Brevibacillus brevis
(strain 47 / JCM 6285 / NBRC 100599) GN=psuG PE=3 SV=1
Length = 308
Score = 197 bits (502), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 146/241 (60%), Gaps = 31/241 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ ELE A K +RRD A+++A+ GATTV+ATM A M GI +F TGGIGG
Sbjct: 70 LTDSELEEFAT-NKNVAKVSRRDFAYILASGKIGATTVAATMIAAEMAGIHMFATGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR GE T D+S+DLTEL +T VAVV AG KSILDI RTLEYL
Sbjct: 129 VHREGEITWDVSADLTELAQTDVAVVCAGAKSILDIGRTLEYLETQGVPVVGYRTDEFPS 188
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V R+D+PE+ ++++ L L G++I P+P A + IE+ IQ A
Sbjct: 189 FFARKSGFGVDMRIDTPEEVGKMMNTKWDLGLKGGMIIANPVPESDALNHEEIEAVIQKA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 216
L EA+E NI G TPF+L +V +LT G SLA+NIALVK+NA + AKI+VA Q+E+
Sbjct: 249 LAEAKENNIAGKQVTPFMLDKVKKLTEGKSLATNIALVKHNAEVAAKIAVAY----QKEA 304
Query: 217 N 217
N
Sbjct: 305 N 305
>sp|Q7MZE1|PSUG2_PHOLL Pseudouridine-5'-phosphate glycosidase 2 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=psuG2 PE=3
SV=1
Length = 312
Score = 191 bits (485), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 142/234 (60%), Gaps = 26/234 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+ LA+ G + K +RRD+ V+A NGATTV++TM A+M GI +F TGGIGG
Sbjct: 76 LSHEEIAFLARKGDEITKVSRRDLPFVIAAGKNGATTVASTMIIAAMAGIRIFATGGIGG 135
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VP----------- 107
VHR E T DIS+DL EL +T VAVV AG KSILD+ T EYL VP
Sbjct: 136 VHRGAEQTFDISADLQELAKTSVAVVCAGAKSILDLGLTTEYLETHGVPLIGYQTHALPA 195
Query: 108 --C---------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
C R+DSPE A+ + V L GLV+ PIP +A I +AI+ A
Sbjct: 196 FFCRTSPFSVNIRLDSPEQIAQAMAVKWDTGLQGGLVVANPIPEPYAMPEAEISAAIEQA 255
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
+RE+ E+ + G A TPFLLARV+ELTGG SL+SNI LV NNA + AKI+ +
Sbjct: 256 VRESIEQRVNGKACTPFLLARVSELTGGNSLSSNIQLVLNNAELAAKIACCYWE 309
>sp|B1HV79|PSUG_LYSSC Pseudouridine-5'-phosphate glycosidase OS=Lysinibacillus sphaericus
(strain C3-41) GN=psuG PE=3 SV=1
Length = 304
Score = 191 bits (485), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 141/236 (59%), Gaps = 27/236 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EELE A K +RRD+ +++AT+ GATTV+ATM A + GI +FVTGGIGG
Sbjct: 70 LSDEELEMFGNAQGVA-KASRRDLGYLLATKKLGATTVAATMICAELAGIEIFVTGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC---------- 108
VHR E TMD+S+DL EL +T VAV+ AG KSILDI TLEYL VP
Sbjct: 129 VHRGAETTMDVSADLEELAQTNVAVICAGAKSILDIGLTLEYLETKGVPVVGYGTDELPA 188
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
++D+PE+ A ++ +L L G VI PIP A I + I+ A
Sbjct: 189 FYTRQSGFDVNFQLDTPEEIAEMLSAKWQLGLKGGAVIANPIPEAEALEHGFITNIIEKA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212
L EA E I G TPFLL +V ELT G SL +NIALVKNNA++GAKI+VA QL
Sbjct: 249 LVEAEENGIQGKNVTPFLLGKVKELTEGKSLDANIALVKNNAVVGAKIAVAFNQLH 304
>sp|Q8NYD0|PSUG_STAAW Pseudouridine-5'-phosphate glycosidase OS=Staphylococcus aureus
(strain MW2) GN=psuG PE=3 SV=1
Length = 307
Score = 190 bits (483), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 146/238 (61%), Gaps = 33/238 (13%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L +E+LE LA K +RRD+A VVA + GATTV+ TM A+M GI FVTGGIGG
Sbjct: 73 LESEDLEILAT-SKDVAKVSRRDLAEVVAMKCVGATTVATTMICAAMAGIQFFVTGGIGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC---------- 108
VH+ EHTMDIS+DL EL +T V V+ AG KSILD+P+T+EYL VP
Sbjct: 132 VHKGAEHTMDISADLEELSKTNVTVICAGAKSILDLPKTMEYLETKGVPVIGYQTNELPA 191
Query: 109 ------------RVDSPEDCARLIDVNM---KLKLGSGLVIGVPIPREHAASGRVIESAI 153
V++PE RL D+++ +L L G+V+ PIP EHA S IE+ I
Sbjct: 192 FFTRESGVKLTSSVETPE---RLADIHLTKQQLNLEGGIVVANPIPYEHALSKAYIEAII 248
Query: 154 QSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
A+ EA + I G TPFLL ++ E T G SLA+NI LV+NNA +GAKI+VA+ +L
Sbjct: 249 NEAVVEAENQGIKGKDATPFLLGKIVEKTNGKSLAANIKLVENNAALGAKIAVAVNKL 306
>sp|Q46PS3|PSUG_CUPPJ Pseudouridine-5'-phosphate glycosidase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=psuG PE=3
SV=2
Length = 314
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 136/222 (61%), Gaps = 27/222 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS +ELERL + G KA K +RRD+ V+ + GATTV+ TM A++ GI VFVTGGIGG
Sbjct: 75 LSDDELERLGRSG-KAHKVSRRDLPAVLTSGELGATTVAGTMICAALAGIEVFVTGGIGG 133
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VP---C------- 108
VHR + T DIS+DL EL RT VAVV AG KSILDI TLEYL VP C
Sbjct: 134 VHRGAQETFDISADLQELARTSVAVVCAGAKSILDIGLTLEYLETQGVPVLTCEQENFAA 193
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
R+D P + AR I L L G+++ P+P A + I++ Q A
Sbjct: 194 FYKRDSGFRADYRLDDPAEQARFIRTKWDLGLAGGVLLSTPVPEAAAMASEEIDALTQQA 253
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNA 198
L EA+ + ITG A TPFLLAR+ LTGG SLA+NIALVK+NA
Sbjct: 254 LDEAQAQGITGKAVTPFLLARIKALTGGRSLATNIALVKHNA 295
>sp|Q1M4T3|PSUG2_RHIL3 Pseudouridine-5'-phosphate glycosidase 2 OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=psuG2 PE=3 SV=1
Length = 309
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 147/239 (61%), Gaps = 31/239 (12%)
Query: 3 LSTEELERLAKLGSKA-QKTARRDIAHVVATRGNGA-TTVSATMFFASMVGIPVFVTGGI 60
L +ELE LA+ SK K + RD+A V RG A TTVSATM A + GI VF TGG+
Sbjct: 71 LEHDELEELAQ--SKGIVKASGRDLA-VAMIRGQSAGTTVSATMLMADLAGIDVFATGGV 127
Query: 61 GGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC-------- 108
GGVHR E T DIS+DLTELGRT AVV AG+KSILDI +TLEYL VP
Sbjct: 128 GGVHRGAEQTFDISADLTELGRTKTAVVCAGVKSILDIAKTLEYLETQRVPVIAYGTEDF 187
Query: 109 --------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQ 154
R+D+PE+ A+ + ++ +L G+GL+I PIP A + I+ I
Sbjct: 188 PAFFTRRSGFKADHRLDTPEEIAKAMWLHHQLGTGTGLLIANPIPEASALAPDFIDGTIA 247
Query: 155 SALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQ 213
A+R+A E+ I TPFLLAR+NELT G SL +NI LVKNNA + A+I+VA A L++
Sbjct: 248 DAVRDADERGIDRKELTPFLLARINELTKGESLKANIELVKNNARLAARIAVAYAPLKK 306
>sp|Q8RCT3|PSUG_THETN Pseudouridine-5'-phosphate glycosidase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=psuG PE=3 SV=1
Length = 307
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 141/238 (59%), Gaps = 27/238 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ EELE + + K ++RD+ V+A N ATTVSATM A++ GI VFVTGGIGG
Sbjct: 70 LNEEELEFMGT-SKEILKASKRDLPVVLAKGLNAATTVSATMICANLAGIKVFVTGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E T DIS+DL EL T VAVV AG K+ILD+PRTLEYL
Sbjct: 129 VHRGAEETFDISADLQELANTNVAVVCAGAKAILDLPRTLEYLETFGVPVIGFRTEEFPA 188
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V RV+ + A++I L L G++I PIP E+A IE AI+ A
Sbjct: 189 FYTRESGLKVDYRVEDEVEAAKVIKTKWDLGLKGGILIANPIPEEYALDRAYIEKAIEEA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQ 214
+ EA + I G A TPFLL ++ +LT G SL +NI LVKNNA +GAKI+V L +L ++
Sbjct: 249 IFEADRRGIRGKALTPFLLEKIKDLTEGKSLKANIELVKNNARVGAKIAVQLNKLYKE 306
>sp|A7GCK7|PSUG_CLOBL Pseudouridine-5'-phosphate glycosidase OS=Clostridium botulinum
(strain Langeland / NCTC 10281 / Type F) GN=psuG PE=3
SV=1
Length = 307
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 139/237 (58%), Gaps = 26/237 (10%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ +E+E L K G + KT+RRDI ++A + +GATTV++TM A++ GI VF TGGIGG
Sbjct: 71 LTKDEIEYLGKKGKEVVKTSRRDIPFILAKKLDGATTVASTMIVANLAGIKVFGTGGIGG 130
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR + + DIS+DL EL T VAVV AG KSILDI TLEYL
Sbjct: 131 VHRGAQESFDISADLQELANTNVAVVCAGAKSILDIGLTLEYLETQGVPVVGFGTEELPA 190
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V RVD+ ++ A + L L G+V+G PIP E+ I AI A
Sbjct: 191 FYTRKSGFKVDYRVDTAKELAEALKAKWDLGLKGGMVVGNPIPEEYQMDYDTITKAINDA 250
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQ 213
++EA EK I G TPFLLA+V ++T G SL +NI LV NN + + +++ L++L +
Sbjct: 251 VKEAEEKGIKGKESTPFLLAKVKDITKGKSLEANIQLVYNNVAVASDLAIELSKLNK 307
>sp|P33025|PSUG_ECOLI Pseudouridine-5'-phosphate glycosidase OS=Escherichia coli (strain
K12) GN=psuG PE=1 SV=1
Length = 312
Score = 183 bits (464), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 132/229 (57%), Gaps = 26/229 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+E L + G K +RRD+ VVA NGATTV++TM A++ GI VF TGGIGG
Sbjct: 76 LSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGG 135
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR EHT DIS+DL EL T V VV AG KSILD+ T EYL
Sbjct: 136 VHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPA 195
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V R+DS + AR + V + L GLV+ PIP + A I +AI A
Sbjct: 196 FFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQA 255
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKIS 205
+ EA + + G TPFLLARV ELTGG SL SNI LV NNA++ ++I+
Sbjct: 256 VAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIA 304
>sp|A9BJN0|PSUG_PETMO Pseudouridine-5'-phosphate glycosidase OS=Petrotoga mobilis (strain
DSM 10674 / SJ95) GN=psuG PE=3 SV=1
Length = 306
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 138/229 (60%), Gaps = 27/229 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EELE +A K +R D+ ++A N ATTV+ATM A + GI VFVTGGIGG
Sbjct: 72 LSKEELEFMAT-SKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGG 130
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR+ + T DIS+DL EL +T VAV+SAG K+ILD+ T EYL
Sbjct: 131 VHRNAQETFDISADLQELAKTNVAVISAGPKAILDLQLTKEYLETFGVPVIGYQTDELPC 190
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
VP RV++P++ A ++ L L G+ I PIP+E++ I+ I++A
Sbjct: 191 FFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDFEEIDKTIENA 250
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKIS 205
+ EA+++ I G TPFLL+++NELT G SL +NI LV NNA +GA+I+
Sbjct: 251 IEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIA 299
>sp|Q5L078|PSUG_GEOKA Pseudouridine-5'-phosphate glycosidase OS=Geobacillus kaustophilus
(strain HTA426) GN=psuG PE=3 SV=1
Length = 301
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 132/219 (60%), Gaps = 27/219 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ ELE+L +K +RRD+ +VVA + +GATTV+ TM A M GI VF TGGIGG
Sbjct: 70 LTEGELEQLGT-SHDVEKVSRRDLPYVVAMKKHGATTVAGTMICAEMAGIRVFATGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E TMDIS+DL EL RT VAVV AG KSILD+ TLEYL
Sbjct: 129 VHRGAEQTMDISADLQELARTNVAVVCAGAKSILDLGLTLEYLETHGVPVIGYQTDVLPA 188
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V R+DS ++ A+ ++ KL L G+VI P+P+E I + I+ A
Sbjct: 189 FYSRTSPFRVDYRLDSAKEIAQFLETKWKLGLNGGVVIANPVPKEEELEESYITAIIEQA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVK 195
L+EA +++ITG + TPFLL RV LTGG SL +NIALVK
Sbjct: 249 LKEAEKQHITGKSVTPFLLDRVKTLTGGKSLQANIALVK 287
>sp|Q2SM69|PSUG_HAHCH Pseudouridine-5'-phosphate glycosidase OS=Hahella chejuensis
(strain KCTC 2396) GN=psuG PE=3 SV=1
Length = 303
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 130/221 (58%), Gaps = 26/221 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+E L K G K +RRDI ++A G+GATTV++TM A+M G+ VF TGGIGG
Sbjct: 70 LSKEEIEYLGKAGLNVTKASRRDIPFIIARGGDGATTVASTMILAAMAGVKVFATGGIGG 129
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR + T DIS+DL EL T VAV+ AG KSILD+ T EYL
Sbjct: 130 VHRGAQETFDISADLQELAHTNVAVICAGAKSILDLGLTREYLETHGVPLVGYQTSTLPA 189
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V ++D+PE A+ + ++ L G+VI PIP +A I++AI +A
Sbjct: 190 FYTRDSDFDVDYQLDTPEQIAQALQAKWEMGLQGGVVIANPIPEAYAMDRGKIDAAISAA 249
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
L E +K ++G TPFLLA+V E+TGG SL +NI LV NN
Sbjct: 250 LAEMDDKGVSGKDSTPFLLAKVAEITGGDSLKANIQLVFNN 290
>sp|B6IRJ4|PSUG_RHOCS Pseudouridine-5'-phosphate glycosidase OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=psuG PE=3 SV=1
Length = 320
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 148/240 (61%), Gaps = 28/240 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L E+++RLA G+ K +RRD+ V+A +GATTV+ATM A + GI VF TGGIGG
Sbjct: 70 LDAEDMQRLAAPGTA--KVSRRDLPLVLAKGADGATTVAATMIAADLAGIAVFATGGIGG 127
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC---------- 108
VHR E T DIS+DL EL T VAVV AG K+ILD+PRTLEYL VP
Sbjct: 128 VHRGVETTGDISADLEELATTSVAVVCAGAKAILDLPRTLEYLETRGVPVVGFGTDAFPA 187
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
R D+PED AR+++ +L L G+V+ VPIP E A E+A+Q A
Sbjct: 188 FYHRDSGLPVDGRCDTPEDAARVLNAKWRLGLAGGIVVAVPIPDEAALDAAQAEAAVQQA 247
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 216
+ EA + G A TPFLL R+ LTGG SL +N AL+ NNA +GA+I+VA A+L+Q+ +
Sbjct: 248 VAEAATGGVRGKALTPFLLHRLETLTGGASLTANRALLLNNAAVGARIAVAYARLKQETT 307
>sp|Q01RY8|PSUG_SOLUE Pseudouridine-5'-phosphate glycosidase OS=Solibacter usitatus
(strain Ellin6076) GN=psuG PE=3 SV=1
Length = 299
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 138/233 (59%), Gaps = 29/233 (12%)
Query: 3 LSTEELERLAKLGSK-AQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIG 61
LS +ELE LA G+K K +R D+ + +AT+ GATTV+ATM A++ GI +F TGGIG
Sbjct: 68 LSDKELEWLA--GAKNVLKLSRNDLPYAIATQKIGATTVAATMIAANLAGIRIFATGGIG 125
Query: 62 GVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL---------------- 105
GVHR E T DIS+DL E RT VAVV AG K+ILD+P+TLEYL
Sbjct: 126 GVHRGAETTFDISADLEEFARTSVAVVCAGAKAILDLPKTLEYLETRGVPVIAYGTDEFP 185
Query: 106 ----------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQS 155
P R+D+P + AR ++V L L G VI P+P E + + I S
Sbjct: 186 AFWSRQSGLKAPLRLDTPAEIARFLEVKWSLNLTGGAVICNPVPAEDEIPFHEMRTFIDS 245
Query: 156 ALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
A+ EA I G A TP++LAR+ ELTGG SL +N+AL +NNA + A+++ L
Sbjct: 246 AVDEAERYGIKGKAVTPYILARIVELTGGRSLRTNMALAQNNARLAAELATHL 298
>sp|Q5ZU79|PSUG_LEGPH Pseudouridine-5'-phosphate glycosidase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=psuG PE=3 SV=1
Length = 308
Score = 173 bits (439), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 140/234 (59%), Gaps = 29/234 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ E +E LA L + K +RRDI+ V++ + +TTV+ATMF A M +P+FVTGGIGG
Sbjct: 71 LTQEVMEHLA-LQKEVIKASRRDISFVLSRKVTASTTVAATMFCAHMAKLPLFVTGGIGG 129
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ + DIS+DL EL TPV VV +G KSILD+P+TLE L
Sbjct: 130 VHQDVTMSFDISADLIELSNTPVTVVCSGAKSILDLPKTLEVLETFGVPVIGYATDEFPA 189
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
VP R++S E+ A L+ + KL + +G+V+ PIP S I I+ A
Sbjct: 190 FYSRSSGIPVPQRLNSAEEVANLMSIQQKLNMKNGIVVANPIPVSAELSDEEISPYIKQA 249
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
EA K+++G + TPFLL R+ ELT G SL +NI L+KNNA +GA+I++A +
Sbjct: 250 HDEA--KHMSGKSLTPFLLKRIAELTAGKSLEANIELIKNNAFLGAEIAIAYQK 301
>sp|A6TL60|PSUG_ALKMQ Pseudouridine-5'-phosphate glycosidase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=psuG PE=3 SV=1
Length = 307
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 136/235 (57%), Gaps = 27/235 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ EEL L + K +RRD+ ++A NGATTV++TM A++ GI VFVTGGIGG
Sbjct: 73 LTEEELMFLGQ-SKDVVKASRRDLPLIIAKELNGATTVASTMIIAALAGIKVFVTGGIGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLE------------------- 103
VHR + T+DIS+DL EL +T VAVV AG+KSILDI TLE
Sbjct: 132 VHRGAQETLDISADLMELAQTNVAVVCAGVKSILDIGLTLEVLETHGVPIVGYQTEDFPA 191
Query: 104 -------YLVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
Y V V + E+ AR + L L G+V+ PIP +A +I AI A
Sbjct: 192 FYTRKSGYGVDYAVANVEELARALKAKWDLDLKGGVVVANPIPEAYAMDEALITQAIDEA 251
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
++EA K I G TPFLL ++ E+T G SL SNI LV NNA IGA+++VAL +L
Sbjct: 252 VQEAAAKGIQGKETTPFLLTKIKEITEGKSLESNIELVFNNAKIGAELAVALHRL 306
>sp|A8LQI0|PSUG_DINSH Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae
(strain DFL 12) GN=psuG PE=3 SV=1
Length = 305
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 135/232 (58%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L +ELE LAK+ A K +R DI + ++ + TTV+ATM A M GI VF TGGIGG
Sbjct: 73 LGADELEALAKV-KDALKISRADIGYAISQGKSAGTTVAATMIVAQMAGIRVFATGGIGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ E + DIS+DLTELGRT V VV+AG K+ILD+P+TLE L
Sbjct: 132 VHKGVETSFDISADLTELGRTDVIVVAAGAKAILDVPKTLEVLETQGVSVVGYRTDTLPA 191
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
+P R+DS + + V L+LG G+++ PIP +I I +A
Sbjct: 192 FWTSGSDLDIPLRLDSAAEISEFQKVRDALRLGGGMLVANPIPAGDEIPAEIINGYIATA 251
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
E ++I+G A TPFLL R+ EL+ G SL SNIALVKNNA + A I+VAL
Sbjct: 252 QAEMAAQSISGKAVTPFLLQRIFELSEGRSLRSNIALVKNNARLAADIAVAL 303
>sp|C0QZV6|PSUG_BRAHW Pseudouridine-5'-phosphate glycosidase OS=Brachyspira
hyodysenteriae (strain ATCC 49526 / WA1) GN=psuG PE=3
SV=1
Length = 308
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 134/235 (57%), Gaps = 27/235 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ EELE + K++RRD+ ++A + +GATTV+ TM AS+ GI VF TGGIGG
Sbjct: 73 LNKEELEYMGS-NKNIAKSSRRDLPVMLALKKDGATTVTTTMIGASLAGIKVFATGGIGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR+ + T DIS+DL EL +T VAVV AG KSILDI T+EYL
Sbjct: 132 VHRYAQETFDISADLQELSKTNVAVVCAGAKSILDIGLTIEYLETFGIPVLGYKTENFPA 191
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V ++D+ +D A ++D KL L G+++ PIP E+ I I
Sbjct: 192 FYTRESGYKVDYKIDTTKDIANILDTKWKLGLNGGVLVCNPIPEEYEMDKDYINKIIDET 251
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
++EAR+KNI+G TP++LA+++ +T SL +N LV NN + A I+ + L
Sbjct: 252 VKEARDKNISGKDVTPYILAKLHSVTENKSLKANKELVYNNCRVAANIAYDYSNL 306
>sp|Q98NQ8|PSUG_RHILO Pseudouridine-5'-phosphate glycosidase OS=Rhizobium loti (strain
MAFF303099) GN=psuG PE=3 SV=1
Length = 305
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 130/232 (56%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS E E LA G A K +R D+ VA G TTV+ATM A MVGI VF TGGIGG
Sbjct: 75 LSDGERESLAMTGD-AMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGG 133
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ E + DIS+DL EL RTPV VVSAG K+ILDI +TLE L
Sbjct: 134 VHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRGVPVVGHGCETMPA 193
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P + PE+ A + L LG G+++ P+P H + I++A
Sbjct: 194 FWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHEIPAEEMAGYIEAA 253
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
+ A N+TG A TPFLL ++ ELTGG SL +NIALV+NNA + A+I+ AL
Sbjct: 254 QKAAEALNVTGKAVTPFLLGKILELTGGRSLKTNIALVENNARLAAEIAKAL 305
>sp|A9GT78|PSUG_SORC5 Pseudouridine-5'-phosphate glycosidase OS=Sorangium cellulosum
(strain So ce56) GN=psuG PE=3 SV=1
Length = 317
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 133/218 (61%), Gaps = 27/218 (12%)
Query: 6 EELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHR 65
E+LERLA+ G KA K +RRD+A ++ G TTV+ TM A+ GI VF TGGIGGVHR
Sbjct: 75 EDLERLARGGGKAAKASRRDVAALLVLGGMAGTTVATTMMAAAWAGIQVFATGGIGGVHR 134
Query: 66 HGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC------------- 108
E T DIS+DL EL +T VAVV AG KSILDIP+TLE L VP
Sbjct: 135 GAETTFDISADLEELSQTQVAVVCAGAKSILDIPKTLETLETHGVPVLGYKTEDFPAFWA 194
Query: 109 ---------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 159
R++S E+ AR+I + +L +G G+++ PIP HA R IE+ I+ A+R
Sbjct: 195 RQSGQKVDHRIESAEEAARVIALQFELGMG-GVLVANPIPESHAMDARAIEARIEEAIRC 253
Query: 160 AREKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
A + ++ TPFLL R+ ELT G SL +NIALV+NN
Sbjct: 254 AEAEGVSRKDLTPFLLKRIFELTEGKSLIANIALVENN 291
>sp|B8F668|PSUG_HAEPS Pseudouridine-5'-phosphate glycosidase OS=Haemophilus parasuis
serovar 5 (strain SH0165) GN=psuG PE=3 SV=1
Length = 302
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS +ELE A K +RRD+ ++A++ GATTV++TM A + GI FVTGG+GG
Sbjct: 70 LSDDELELFGSSKGIA-KVSRRDLPQIIASKKLGATTVASTMICAHLAGIKFFVTGGLGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ E T+DIS+DL EL +T V V+ AG KSILD+ TLEYL
Sbjct: 129 VHKGWETTLDISADLDELAQTSVTVICAGAKSILDLDATLEYLETKGVPVVGYKTKNLPA 188
Query: 106 -------VPCRVDSPE--DCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
+P + E + A +I V +L L G+V+ PIP+E + I I +A
Sbjct: 189 FFTRDSGLPLALSCEELTEIAEMIKVKWQLGLEGGVVVANPIPQEDELAPSYINGIIDTA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
++EA EK I G TPFLL ++ E+T G SL +NI LVKNNA +GA+++V
Sbjct: 249 VKEAEEKGIIGKDITPFLLGKIVEMTEGKSLEANIKLVKNNAKVGARLAVEF 300
>sp|B8II14|PSUG_METNO Pseudouridine-5'-phosphate glycosidase OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=psuG PE=3 SV=1
Length = 337
Score = 163 bits (412), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 129/217 (59%), Gaps = 28/217 (12%)
Query: 9 ERLAKLGSKAQ--KTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRH 66
E L LG+ + K +R D+ H VA +G+TTV+ATM A GI VF TGGIGGVHR
Sbjct: 74 EILDWLGTAKEVLKLSRADLPHAVAAGLHGSTTVAATMICAHRAGIRVFATGGIGGVHRG 133
Query: 67 GEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL--------------------- 105
E T+DIS+DL EL RTPVAVV AG K+ILD+PRTLEYL
Sbjct: 134 VEETLDISADLDELARTPVAVVCAGAKAILDLPRTLEYLETRGVPVVGYRTDRFPAFWSR 193
Query: 106 -----VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALREA 160
P R+D+PE A L+ L LG G+++ P+P R I + I +A+ +A
Sbjct: 194 DSGLPAPLRLDTPEAIAALMRTKEALDLGGGILVANPVPEADEIPAREIAALIATAVAQA 253
Query: 161 REKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
R I G A TPFLL+R+ +LTGG SL++NIALVKNN
Sbjct: 254 RAAGIAGKAVTPFLLSRLLDLTGGRSLSTNIALVKNN 290
>sp|Q9USY1|YOW5_SCHPO Pseudouridine-metabolizing bifunctional protein C1861.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1861.05 PE=3 SV=1
Length = 747
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 7 ELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRH 66
+L LAK G A K +RRD+++V + R NG TTV+ATM A GI VF TGGIGGVHR
Sbjct: 110 QLSELAKSGETAYKVSRRDLSYVASQRLNGGTTVAATMILARAAGIDVFATGGIGGVHRG 169
Query: 67 GEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL--------------------- 105
E++MDIS+DL ELGRT VAVVSAG+KSILDI RTLE L
Sbjct: 170 AENSMDISADLIELGRTRVAVVSAGVKSILDIGRTLEVLETQGVPVVTLGPPKSAFPAFF 229
Query: 106 -------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALR 158
P +++P+ A ++ N++L G ++ +P P + +E+ I++ L+
Sbjct: 230 SRESKFQSPLSLETPQLIANMLFSNIQLGQECGTLVAIPTPHHCSIDYEKMEALIETCLQ 289
Query: 159 EAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 216
+ + ITG TP+LL + + G SL +NI LV NNA + I+ LA L+++ S
Sbjct: 290 RSVQLGITGKNVTPWLLGELLRESKGKSLNTNIDLVLNNAEKASLIAKELAVLKEKSS 347
>sp|A1SQN1|PSUG_NOCSJ Pseudouridine-5'-phosphate glycosidase OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=psuG PE=3 SV=1
Length = 307
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 133/236 (56%), Gaps = 27/236 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ ++LE LA K + RD+ VVA R +GATTV+ATM A++ GI VFVTGG+GG
Sbjct: 73 LTADDLELLAS-DEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR + + D S+DLTELG T VAV+SAG+KSILDI TLE L
Sbjct: 132 VHRGAQQSFDESADLTELGSTDVAVISAGVKSILDIGLTLERLETLGVPVLAYGSDEFPS 191
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P RVDS + A ++ L + G+V+ PIP I I+ A
Sbjct: 192 FYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIPADEIGGIIEQA 251
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212
L + + I GN TP+LL R+ E+TGG SL +NIALV+ NA +GA I+ A LR
Sbjct: 252 LADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIAREYAGLR 307
>sp|A5UT22|PSUG_ROSS1 Pseudouridine-5'-phosphate glycosidase OS=Roseiflexus sp. (strain
RS-1) GN=psuG PE=3 SV=1
Length = 311
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 127/214 (59%), Gaps = 24/214 (11%)
Query: 20 KTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTE 79
K +RRDI +VVA G+GATTV+ATM A + G+ VF TGGIGGVHR T D+S+DLTE
Sbjct: 96 KVSRRDIGYVVAAGGDGATTVAATMALAHLAGVQVFATGGIGGVHRGARETWDVSADLTE 155
Query: 80 LGRTPVAVVSAGIKSILDIPRTLEYL----VPCRVDSPEDCARLIDVNMKLKL------- 128
L RTPV VV AG K+ILD+P TLEYL VP + V+ L +
Sbjct: 156 LERTPVLVVCAGAKAILDLPATLEYLETGGVPVLGWRTAEFPAFYSVSSGLPVAYAQDAS 215
Query: 129 -------------GSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLL 175
G+G+V+ VP P E A V+E+AI+ AL A ++ + G A TPFLL
Sbjct: 216 FVARAWKAHRALGGAGMVLAVPPPVEDAIDRAVVEAAIERALNRAVKEGVHGPAVTPFLL 275
Query: 176 ARVNELTGGLSLASNIALVKNNALIGAKISVALA 209
A + T G S+ +N+AL++ NA I A+++ A+A
Sbjct: 276 AALARETEGESVRANVALLRQNARIAAQVATAIA 309
>sp|C5CDZ1|PSUG_KOSOT Pseudouridine-5'-phosphate glycosidase OS=Kosmotoga olearia (strain
TBF 19.5.1) GN=psuG PE=3 SV=1
Length = 289
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 133/234 (56%), Gaps = 29/234 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ +E+E LAK K +IA +A R N ATTVSATM A GI VF TGGIGG
Sbjct: 55 LTEKEIEHLAK-AKNVMKIGTAEIAAAIALRRNAATTVSATMRLAKNAGIDVFATGGIGG 113
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR+ D+S D+ EL +T + VV AG KSILD+ RT+E+L
Sbjct: 114 VHRN--VPWDVSQDIMELSKTRMIVVCAGFKSILDVERTIEFLETFQVTVVGYQTDYMPL 171
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V R DSPE+ + + KL + +++ PIP + +E I+ A
Sbjct: 172 FHTKESEYKVNIRADSPEEIVAIFNEKEKLGIEGAILVANPIPEQSEIPREELEEYIKKA 231
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
+ +A+E I+G + TPFLL+R+ EL+GG +L +NIAL+KNNA + +I+VAL++
Sbjct: 232 VAQAKENGISGKSLTPFLLSRLTELSGGKTLTANIALLKNNASLAGEIAVALSR 285
>sp|Q28PY7|PSUG_JANSC Pseudouridine-5'-phosphate glycosidase OS=Jannaschia sp. (strain
CCS1) GN=psuG PE=3 SV=1
Length = 302
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 129/232 (55%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ ELE LA+ A K +R D+A +A G GATTV+ATM A++ GI VF TGGIGG
Sbjct: 70 LTGTELEVLAQADGVA-KLSRADLAACLARGGVGATTVAATMICAALAGIHVFATGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ E T DIS+DL EL TPV V++AG K+ILD+P+TLE L
Sbjct: 129 VHKGAEDTFDISADLRELAHTPVTVIAAGAKAILDLPKTLEVLETLGVPVIAHGQDAFPA 188
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P R DS + AR + KL L G ++ PIP + + I A
Sbjct: 189 FWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPASTLAPLIVQA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
EA K + A TPFLL R+ ELT G +LASNIALV NNA +GA ++ AL
Sbjct: 249 QSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARAL 300
>sp|A5IXG3|PSUG_MYCAP Pseudouridine-5'-phosphate glycosidase OS=Mycoplasma agalactiae
(strain PG2) GN=psuG PE=3 SV=1
Length = 301
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 127/236 (53%), Gaps = 28/236 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L +E+ LAKL KT++RD +V+A + NG TTVS T+ A VGIPVF TGGIGG
Sbjct: 68 LENDEINELAKL-KDVIKTSKRDFGYVLANKKNGGTTVSGTVLVAQKVGIPVFATGGIGG 126
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E T DIS DL EL V VV AG K ILD+ TLEYL
Sbjct: 127 VHRGAEITFDISRDLDELSTNNVLVVCAGAKLILDLGLTLEYLETKGVEVLGYNSDKLPA 186
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V V S + A ++ K G G+++ PIP ++ I I A
Sbjct: 187 FYSSSSEFNVTYNVHSASEVAAIMKAKWKFTNG-GIILANPIPEQYGLEYEYILDNINKA 245
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212
+ +A+ + I+G TP+LL++V ELT G SL +NI LV NNA + A+++V A+ +
Sbjct: 246 IEQAKVEGISGKKTTPYLLSKVLELTEGKSLEANIQLVYNNAKVAAQVAVEYAKQK 301
>sp|Q1MFZ6|PSUG1_RHIL3 Pseudouridine-5'-phosphate glycosidase 1 OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=psuG1 PE=3 SV=1
Length = 317
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 133/234 (56%), Gaps = 27/234 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L ELE+LAK ++ K +R D+A +A R GATTV+ATM A+ GI VF TGGIGG
Sbjct: 85 LEAAELEQLAK-ATEVMKVSRADLAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGG 143
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E + DIS+DL EL RT V VV AG K+ILDIP+TLE L
Sbjct: 144 VHRGAEESFDISADLEELARTGVIVVCAGAKAILDIPKTLEVLETRGVPVVTYESEEFPA 203
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P ++SP A V +L + G+++ P+P + +E I+ A
Sbjct: 204 FWSRSSGIRSPLSLNSPAAIANFQTVREQLGIDGGMLVANPVPEADEIASEEMEIYIERA 263
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
L A +TG A TP+LL+ + +LT G SL +NIALV+NNA + A+I+VAL +
Sbjct: 264 LDSAERDEVTGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAAEIAVALGE 317
>sp|Q165S4|PSUG_ROSDO Pseudouridine-5'-phosphate glycosidase OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=psuG PE=3 SV=1
Length = 310
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 126/232 (54%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L +LE LA+ A K +R DIA +AT G GATTVSATM A + GI VF TGGIGG
Sbjct: 71 LEAHQLEALAQAKGVA-KLSRADIAACMATGGTGATTVSATMIAAHLAGISVFATGGIGG 129
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E + D+S+DL EL +TPV VV+AG K+ILD+ +TLE L
Sbjct: 130 VHRGAESSFDVSADLLELAQTPVTVVAAGAKAILDVAKTLEVLETQGVPVITVGQDSFPA 189
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P R+D P A + + L L G ++ PIP + I +A
Sbjct: 190 FWSAESVFKSPLRMDDPVGIAAAHQMRVDLGLPGGQLVANPIPHTDEIPATELAPIIATA 249
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
+A + I G A TP+LL R+ ELT G SL +NIALV+NNA + I+ AL
Sbjct: 250 QADAEKHGIKGKAVTPYLLQRIYELTQGRSLTANIALVRNNARLAGAIAQAL 301
>sp|A7HMA1|PSUG_FERNB Pseudouridine-5'-phosphate glycosidase OS=Fervidobacterium nodosum
(strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=psuG PE=3
SV=1
Length = 296
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 31/235 (13%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
+S E++ + L + K R+I + V + + ATTVSATM A + GI VF TGGIGG
Sbjct: 66 MSQEQINEM--LADEPLKIGTREIPYAVGMKKSAATTVSATMRIAKIAGIDVFATGGIGG 123
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH D+S D+TE+ ++ V VVSAG KSILD+ +T+E+L
Sbjct: 124 VHIG---DWDVSQDITEMAKSDVIVVSAGCKSILDVKKTIEFLETFQVTVVGYKTNKFPI 180
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
+ RVDSPED A++ L + L++ PIP+E S + ++ ++ A
Sbjct: 181 FYEGLSDFNLEHRVDSPEDIAKIFRAKKSLGIEGALLVANPIPQEFVISEQEVDGYMKQA 240
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
L E EK ITG A TP+LL+R+ +L+ G +L SNI L+KNN L+ +I+ +L +
Sbjct: 241 LSECFEKGITGKAVTPYLLSRIAQLSNGKTLTSNIELLKNNVLLACQIAKSLKTM 295
>sp|A9NGD7|PSUG_ACHLI Pseudouridine-5'-phosphate glycosidase OS=Acholeplasma laidlawii
(strain PG-8A) GN=psuG PE=3 SV=1
Length = 303
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 126/235 (53%), Gaps = 27/235 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ EL L KL S K ++RDI + V + +GATTVSAT+ A MVGI VF TGGIGG
Sbjct: 70 LNPNELTSLGKL-SNVLKVSKRDIPYCVIKKYSGATTVSATILIADMVGIKVFATGGIGG 128
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ T DIS DL E+ VAVVSAG K+ILD+ TLEYL
Sbjct: 129 VHKDAAATFDISRDLEEISEKQVAVVSAGAKAILDLDLTLEYLETKGVEVIGYKTSEFPA 188
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
++D A+L+ + L G+V+ PIP+ +A ++ AI SA
Sbjct: 189 FFSNASGLNTTFQLDEASQIAQLMYTKWNMGLSGGIVVANPIPQNYAIDKDSLDKAISSA 248
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
+ A++ ITG TP+LL ++ SL SNI L+ NNA I A I+V ++L
Sbjct: 249 ILSAKDNKITGKELTPYLLKMLHSNKDITSLESNIGLIYNNAKIAALIAVEFSKL 303
>sp|Q9RS16|PSUG_DEIRA Pseudouridine-5'-phosphate glycosidase OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=psuG PE=3
SV=1
Length = 313
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 123/221 (55%), Gaps = 27/221 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS +ELE LA QK + RD+ VA G+GATTV++TM A++ GI VF TGG GG
Sbjct: 79 LSADELELLAT-DKAVQKISTRDLPVTVALGGHGATTVASTMRIAALAGIRVFATGGTGG 137
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR TMDIS+DL EL RT V VVSAG+KSILDI TLE L
Sbjct: 138 VHRGAGETMDISADLLELARTDVCVVSAGVKSILDIGLTLEVLETQGVPAITLGADEFPA 197
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P V +P + AR++ V L L G+++ P+P +E+ I A
Sbjct: 198 FYSRRSGFSSPLTVQTPAEAARVLKVKWDLGLTGGVLLANPVPETAEIPAEEMETHITRA 257
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
L + ++G TP+LL R+ ELTGG SL +NIALV++N
Sbjct: 258 LADMAALGLSGKDTTPYLLGRIVELTGGRSLETNIALVRHN 298
>sp|Q67N11|PSUG_SYMTH Pseudouridine-5'-phosphate glycosidase OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=psuG PE=3 SV=1
Length = 308
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 136/236 (57%), Gaps = 31/236 (13%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ EELE LA +A K + RD+ V+A + GATTV+ T A+ GI VFVTGGIGG
Sbjct: 70 LTDEELELLAT-SPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGG 128
Query: 63 VHRHGE----HTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL------------- 105
VHR D+S+DLT LGRT + VV AG KS+LDI TLE L
Sbjct: 129 VHRKSPGDPAQMWDVSADLTVLGRTDITVVCAGAKSVLDIGATLEVLETLGVTVLGYRTD 188
Query: 106 -------------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESA 152
V RVD+PE+ A +I + L G+++ P+P EHA +E
Sbjct: 189 RFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAMDPDEVERH 248
Query: 153 IQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
I AL+ + +TG A TP+LLAR+ E+T G +L +NIALVK+NAL+GA+I+VAL
Sbjct: 249 IADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQIAVAL 304
>sp|B5Y6G9|PSUG_COPPD Pseudouridine-5'-phosphate glycosidase OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
GN=psuG PE=3 SV=1
Length = 302
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 27/232 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+ L++ K + +D++ A + +G TTVSATMF + GI VF TGGIGG
Sbjct: 67 LSEEEITYLSQ-AKDLHKISLKDLSVAAAKKLSGGTTVSATMFASYKAGIQVFATGGIGG 125
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL--------------VPC 108
VHR + D+S+DL LG P+ VV AG K+ILD+P TLEYL P
Sbjct: 126 VHRDARESFDVSTDLEALGSIPITVVCAGAKAILDLPATLEYLETKGVLVVGYKTDEFPA 185
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
V +P + A++I L++ +++G P P E A +E I++A
Sbjct: 186 FYYGRSGLKLEHSVTTPGELAQIIRERDALEINKAILVGNPPPEEMALEKGKVEQLIEAA 245
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVAL 208
L++A+ NI G TPFLL + + + G +L +NIALVKNNA +G+ I+ AL
Sbjct: 246 LQQAKVNNIKGKDVTPFLLDYLAKNSKGETLETNIALVKNNAYVGSLIAKAL 297
>sp|B7ID34|PSUG_THEAB Pseudouridine-5'-phosphate glycosidase OS=Thermosipho africanus
(strain TCF52B) GN=psuG PE=3 SV=1
Length = 293
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 132/233 (56%), Gaps = 30/233 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS E+L L + K R+I++ +A + + ATTVS+T AS+ GI VF TGGIGG
Sbjct: 66 LSKEQLIEL--VDDNPIKVGTREISYAIAMKKSAATTVSSTAKIASLAGIKVFATGGIGG 123
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL--------------VPC 108
VHR GE D+S D+ EL +T + VVSAG KSILDI +TLE+L P
Sbjct: 124 VHR-GE--WDVSQDIIELSKTNIIVVSAGCKSILDIKKTLEFLETFQVLTVGYKTEYFPI 180
Query: 109 -----------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSAL 157
+V++ ++ A + + KLKL S +++ PIP ++ IE I++
Sbjct: 181 FYNRLSKEKIYKVENADEIANIFNEKNKLKLESAILVANPIPEDYVLDNNEIEGYIKTIE 240
Query: 158 REAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
+E EK+I G TP++L R+ EL+ G +L SNI L+KNN + KI+ +L +
Sbjct: 241 KEIAEKDIHGKEVTPYMLKRLVELSNGKTLESNIVLLKNNVELACKIAQSLKK 293
>sp|A1B316|PSUG_PARDP Pseudouridine-5'-phosphate glycosidase OS=Paracoccus denitrificans
(strain Pd 1222) GN=psuG PE=3 SV=1
Length = 304
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 3 LSTEELERLAKL-GSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIG 61
L E LE LA + K +R D+A +A GATTV+ATM A + GI VF TGGIG
Sbjct: 70 LDAEALEALASTPAEQVMKLSRADLAACLALGRTGATTVAATMICAHLAGIEVFATGGIG 129
Query: 62 GVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL---------------- 105
GVHR E + DIS+DL EL ++PV VV+AG K+ILD+P+TLE L
Sbjct: 130 GVHRGAETSFDISADLQELAQSPVTVVAAGAKAILDLPKTLEVLETLGVPVIAFGQDQLP 189
Query: 106 ----------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQS 155
P R+D P A + +L L G ++ PIP E + ++
Sbjct: 190 AFWSRESGLAAPLRMDDPAQIAASARLRRELGLSGGQLVVNPIPPEAEIPRAEMIPVVEQ 249
Query: 156 ALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
AL EA + I A TPFLL R+ ELT G SL +NIALV NN
Sbjct: 250 ALSEAEAQGIAAKAVTPFLLQRIFELTQGRSLDANIALVLNN 291
>sp|B9LGZ1|PSUG_CHLSY Pseudouridine-5'-phosphate glycosidase OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=psuG PE=3
SV=1
Length = 305
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 138/238 (57%), Gaps = 29/238 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ ELERLA G + +K +RRDI + +GATTV+ATM A+ GI VF TGGIGG
Sbjct: 67 LNGNELERLAVGGDRVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGG 126
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC----RVDSP- 113
VHR H+ D+S+DLTELGRTPV VV AG K+ILD+P TLEYL VP V+ P
Sbjct: 127 VHRGATHSWDVSADLTELGRTPVLVVCAGAKAILDLPATLEYLETQGVPVVGYQTVEFPA 186
Query: 114 -----------------EDCARLIDVNMKLKLGS---GLVIGVPIPREHAASGRVIESAI 153
AR+ + + + G+++ VP P HA +E+AI
Sbjct: 187 FYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALEREAVEAAI 246
Query: 154 QSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQL 211
AL A + + G A TPFLLA + E T G S+ +NIAL++NN + A+++V +++L
Sbjct: 247 GRALARAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNNTRVAAEVAVRISEL 304
>sp|Q7N4X5|PSUG1_PHOLL Pseudouridine-5'-phosphate glycosidase 1 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=psuG1 PE=3
SV=1
Length = 318
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 27/231 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
+S E++E+ A S K RDI V+A+ G GATTV++++ A + GI F + GIGG
Sbjct: 74 MSDEQIEKFAT-ASHVPKVTSRDIPVVLASGGMGATTVASSILAAEIAGIKFFCSAGIGG 132
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E +MDIS+DLT+L R+ VAVV AG K+ILDI TLE+L
Sbjct: 133 VHRGAETSMDISADLTQLTRSRVAVVCAGAKNILDIGLTLEFLETWNVPVISYQSDDFPA 192
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P R+D A+ I++N L G G++I P E A + I+ IQ A
Sbjct: 193 FYCRSSGFKSPQRLDELAVIAKAIEINWMLPGGKGVLITTPTKPEDALDNQKIDIIIQEA 252
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVA 207
+ EA++KNI GN+ T +L+ V+ T G+S +N+A++ N A + K++VA
Sbjct: 253 VLEAKKKNIVGNSLTKYLMRMVDRETDGISAKANMAVLVNTAEVAGKLAVA 303
>sp|Q1D739|PSUG_MYXXD Pseudouridine-5'-phosphate glycosidase OS=Myxococcus xanthus
(strain DK 1622) GN=psuG PE=3 SV=1
Length = 303
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 122/234 (52%), Gaps = 26/234 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L E+ RLA+ + K A RD A +ATR G TTVSAT A+ GI VF TGGIGG
Sbjct: 68 LEEPEMRRLAEGKERLLKVASRDFAVAMATRATGGTTVSATCEMAAAAGIRVFSTGGIGG 127
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC---------- 108
VHR DIS D+ L R PVAVV AG KS+LD+P+T+E L VP
Sbjct: 128 VHRGASEHFDISQDIAALARFPVAVVCAGAKSVLDLPKTMELLETAGVPVIGVGTDELPS 187
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
R D + AR+ + G++ VP P E + +E I +
Sbjct: 188 FYSRGSGIPLEHRADDVDTAARIARARFESLKQGGVLYTVPPPEETSLPRNEVELHIAAT 247
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
L +A + I G A TPFLL+ + + TGG +L +N+AL+ NNA +++VA A+
Sbjct: 248 LADADRQGIRGKAVTPFLLSEMAKRTGGKTLKANLALLTNNARFAGQLAVAYAR 301
>sp|A9B4S4|PSUG_HERA2 Pseudouridine-5'-phosphate glycosidase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=psuG PE=3 SV=1
Length = 303
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 119/218 (54%), Gaps = 27/218 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ E++E A + K +RRDI + VA +GATTV+ATM A + GI VF TGGIGG
Sbjct: 69 LTNEQIEHFAT-ATDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGG 127
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLE----YLVPC---------- 108
VHR T D+S+DL ELG++ V VV AG KSILD+P TLE Y VP
Sbjct: 128 VHRGARDTWDVSADLGELGKSSVLVVCAGAKSILDLPATLEVLETYGVPVVGYTTEELPA 187
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
RVD P A + GSG+V+ VP P E A + +E+AI A
Sbjct: 188 FYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFVEAAIGRA 247
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALV 194
+ +A I G A TPFLL+ + T G S+A+N AL+
Sbjct: 248 IAQAEAAGIRGAAVTPFLLSAMARETEGESIATNTALL 285
>sp|A8GCG3|PSUG_SERP5 Pseudouridine-5'-phosphate glycosidase OS=Serratia proteamaculans
(strain 568) GN=psuG PE=3 SV=1
Length = 308
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 27/233 (11%)
Query: 6 EELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHR 65
E++ER A A K + ++ V+A + GATTV++++ A + GI F + GIGGVHR
Sbjct: 77 EQIERFATTPGIA-KVSSNNLPFVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHR 135
Query: 66 HGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL-------------------- 105
GE +MDISSDL + RT V VV AG K+ILDI RTLE+L
Sbjct: 136 GGEDSMDISSDLIQFTRTNVTVVCAGAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYC 195
Query: 106 ------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 159
P R+DS E A+ ID+N L + +V+ P E A R +++AIQ+A+
Sbjct: 196 RSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAIDSRDVQAAIQAAIEN 255
Query: 160 AREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212
A K +TG+ T F++ V + T G S +N A++ N A I ++++ + R
Sbjct: 256 AAAKGVTGSQVTKFIMKAVEQATHGRSAMANAAVLVNTAEIAGQLAMVYHRPR 308
>sp|A4F929|PSUG_SACEN Pseudouridine-5'-phosphate glycosidase OS=Saccharopolyspora
erythraea (strain NRRL 23338) GN=psuG PE=3 SV=1
Length = 303
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 120/233 (51%), Gaps = 27/233 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L+ E++E LA A K + RD+ VA +G TTV+AT F A GI VF TGG+GG
Sbjct: 71 LTGEQIEELAA-DEAAVKISTRDLPVAVARGASGGTTVAATAFLARKAGIRVFATGGLGG 129
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VPC---------- 108
VH T D S+DL L TP+ +VSAG KSILD+ TLE L +P
Sbjct: 130 VHHGAATTFDESADLVTLASTPLVLVSAGAKSILDLAATLERLETLNIPVVGYRTRRFPG 189
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
VD+P++ A L++ L+L S L++ PIP E + + A
Sbjct: 190 FYVADSGHDLEHSVDTPQEVAALVEARDALELRSALLVANPIPPERQLDPELHRRVLAEA 249
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALA 209
EA + I+G+ TPFLL + TG SL NI + +NN +GA I+ A+A
Sbjct: 250 WEEAERQGISGHDSTPFLLDHIRRATGDRSLEVNIDVYQNNVALGASIARAMA 302
>sp|C6CFY1|PSUG_DICZE Pseudouridine-5'-phosphate glycosidase OS=Dickeya zeae (strain
Ech1591) GN=psuG PE=3 SV=1
Length = 316
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 125/241 (51%), Gaps = 27/241 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
+S ++ER + K + RDI ++A G GATTV++++ A + GIP F + GIGG
Sbjct: 76 MSDADIERFGAT-NGIPKASSRDIPVILAQGGKGATTVASSLVAADLAGIPFFASAGIGG 134
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VHR E +MDIS+DL + R+ VAVV AG KSILD+ TLEYL
Sbjct: 135 VHRGAEKSMDISADLVQFTRSRVAVVCAGAKSILDLGLTLEYLETQCVPIISYQSDDFPA 194
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
P R+D P AR I+++ KL S ++I PI A +ES I+ A
Sbjct: 195 FYCRSSGFPSPHRLDDPAVVARSIEMHWKLGNRSSVLITHPIHENDAIDKDEVESIIREA 254
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 216
+A + I G TP+L+ V T G ++ +N++++ + A + K++ A +Q +
Sbjct: 255 ALQAEHEGIRGPGATPYLMRAVARATQGRTVKANMSVLISTAALAGKLACAHTDYLRQHN 314
Query: 217 N 217
Sbjct: 315 Q 315
>sp|C1AA54|PSUG_GEMAT Pseudouridine-5'-phosphate glycosidase OS=Gemmatimonas aurantiaca
(strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)
GN=psuG PE=3 SV=1
Length = 306
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 132/234 (56%), Gaps = 29/234 (12%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L E+LER + +K + RD+ +A +GATTV+AT+ ++ G+ VF TGGIGG
Sbjct: 73 LDDEDLERFLQR-DGVRKVSARDLGIAMADGADGATTVAATLALCALGGLEVFATGGIGG 131
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VP---C------- 108
VHR + D S+DL EL RTPV VV AG KSILD+P TLE L VP C
Sbjct: 132 VHR--DAPFDESADLIELSRTPVIVVCAGAKSILDLPATLERLETLGVPVVGCGTDELPG 189
Query: 109 ------------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
R+D PE AR + L S +++ P P + A ++++A ++A
Sbjct: 190 FFSLSTGLRLTSRLDRPEQIARAWRAHRALGRESAMLVVQPPPADVAIPADIVDAATRAA 249
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210
L+ A I G A TP+LLA++ + T G S+++N+AL++ NA + +I+VAL +
Sbjct: 250 LQAASLAGIRGAAVTPYLLAQIQQRTEGRSVSANLALLEANARLAGQIAVALVE 303
>sp|Q1AYR4|PSUG_RUBXD Pseudouridine-5'-phosphate glycosidase OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=psuG PE=3 SV=1
Length = 302
Score = 120 bits (300), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 116/215 (53%), Gaps = 28/215 (13%)
Query: 6 EELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHR 65
EELE LA + K + RD+ AT +GATTV+AT A++ GI +F TGG+GGVHR
Sbjct: 72 EELELLAS--GEVPKLSARDLPAAAATGSSGATTVAATAHLAALCGIKLFATGGLGGVHR 129
Query: 66 HGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----VP-------------- 107
+ D+S+DL L R PVAVV +G+KSILD+P TLE L VP
Sbjct: 130 GARESWDVSADLAALSRAPVAVVCSGVKSILDVPATLEQLETLGVPVVGFRSRSFAGFYL 189
Query: 108 ----CRVD-SPED---CARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 159
C +D S ED A LI L LG G+VI P+P E + E A++S L E
Sbjct: 190 TDSGCALDWSVEDEGEAAALIRALPGLGLGCGVVISNPLPPEEQLDPSLHERALRSGLEE 249
Query: 160 AREKNITGNAETPFLLARVNELTGGLSLASNIALV 194
+ I+G TPFLL E TGG SL +N LV
Sbjct: 250 LARRGISGKEVTPFLLEHFRERTGGESLRANERLV 284
>sp|B1W0X1|PSUG_STRGG Pseudouridine-5'-phosphate glycosidase OS=Streptomyces griseus
subsp. griseus (strain JCM 4626 / NBRC 13350) GN=psuG
PE=3 SV=1
Length = 323
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 113/223 (50%), Gaps = 30/223 (13%)
Query: 3 LSTEELERLAKLGSKA-QKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIG 61
L ++LER+A G A +K RD+A +A +GATTVSAT F A+ GI VF TGG+G
Sbjct: 88 LDGDQLERVA--GDPAVRKLGHRDLAPALAAGADGATTVSATAFLAARAGIGVFATGGLG 145
Query: 62 GVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL---------------- 105
GVHR D S+DL L RT + VV AG+KSILD+P TL+ L
Sbjct: 146 GVHREWAENQDESADLRLLARTGITVVCAGVKSILDVPATLQRLETLGVPVVGYGTGHFP 205
Query: 106 ----------VPCRVDSPEDCARLIDVNMKLKLGSG-LVIGVPIPREHAASGRVIESAIQ 154
V V SPE+ A +I L G L++ P+ + + +
Sbjct: 206 GFYLSSSGEPVDWTVHSPEEVAEVIRAREALGGPVGALIVANPVAERDQLDPVLHDRVLA 265
Query: 155 SALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNN 197
AL RE+ I+G TPFLL ++ T G SL +N+A V+ N
Sbjct: 266 QALDACRERGISGQGVTPFLLDQLTRRTEGASLEANLAAVRGN 308
>sp|Q0RBB8|PSUG_FRAAA Pseudouridine-5'-phosphate glycosidase OS=Frankia alni (strain
ACN14a) GN=psuG PE=3 SV=1
Length = 361
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 117/241 (48%), Gaps = 27/241 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
L +L R+A + K + RD+ AT GATTV++T A+ VGI +F TGG+GG
Sbjct: 72 LDEPDLRRIAD-DANVIKLSVRDLPVACATGWTGATTVASTALLAARVGIRLFATGGLGG 130
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLE------------------- 103
VHR + D S+DL L P+ VVSAG+KSILDI TLE
Sbjct: 131 VHRGAGDSFDESADLVTLAAMPITVVSAGVKSILDIGATLERLETLGITVVGYRTSTFPG 190
Query: 104 -------YLVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
Y + RV A + L L S +V+ P+P + A + + + A
Sbjct: 191 FYLPHTTYDLDWRVGDAGQVAATMAAADLLGLTSAIVVANPLPTDQALDPALHDRVLADA 250
Query: 157 LREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQES 216
L A E+ I G A TPFLL + TGG SL NI V+NN + + I++A A + +
Sbjct: 251 LAWATERGIRGKAVTPFLLETFHRETGGASLEVNINAVRNNVAVASDIALAWAAKDRSPT 310
Query: 217 N 217
+
Sbjct: 311 D 311
>sp|A8F8N4|PSUG_THELT Pseudouridine-5'-phosphate glycosidase OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=psuG PE=3
SV=1
Length = 284
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 117/235 (49%), Gaps = 28/235 (11%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+ ++A K +I +A + ATTVSATM A + I VF TGGIGG
Sbjct: 53 LSREEIVQIAS-RKDVLKIGTAEIPFALAKKMWAATTVSATMRIAHLNNIKVFATGGIGG 111
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH+ + D+S DL EL RT + VVSAG KSILD+ T+E L
Sbjct: 112 VHKIDQ--WDVSQDLAELSRTRMIVVSAGPKSILDLRSTVEMLETFQITVVGYKTDELPA 169
Query: 106 VPC--------RVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSAL 157
C RVDS E+ A + K L +++ PIP EHA E + +
Sbjct: 170 FYCKSTSIHINRVDSFEEIASIFLFKEKFNLPGAVLVFNPIPDEHAIEVEQFEEWYRLSE 229
Query: 158 REAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212
+ ++ G TPFLL+R+ + G ++ SN+ L+KNN + +I L++++
Sbjct: 230 HDLDASSVKGKGVTPFLLSRLAHYSKGKTVRSNVELLKNNVKVACEILNQLSKMQ 284
>sp|Q72JF9|PSUG_THET2 Pseudouridine-5'-phosphate glycosidase OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=psuG PE=3
SV=1
Length = 281
Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 107/208 (51%), Gaps = 34/208 (16%)
Query: 3 LSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGG 62
LS EE+E LA G A+K + ++A ++A + TTV+AT+ A + GIPVF TGGIGG
Sbjct: 54 LSPEEMEALAAGG--AEKASLWNLAALLAQGRSAGTTVAATVHLAHLHGIPVFATGGIGG 111
Query: 63 VHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL----------------- 105
VH D S+DL L RTP+ VVS+G K+ILD+ TLE L
Sbjct: 112 VH---PEPYDESADLVALSRTPILVVSSGPKAILDLRATLERLETLGVSVVGYRTDRLPA 168
Query: 106 ---------VPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSA 156
VP RVD+P + AR+ L LG L++ P + ++ A
Sbjct: 169 FFSPDSPFPVPARVDTPMEAARVYLRARALGLGGVLLVN---PVSQGLPYEQVALWVEEA 225
Query: 157 LREAREKNITGNAETPFLLARVNELTGG 184
R A + + G A TP+LL +++EL+ G
Sbjct: 226 GRMAAREGVFGKALTPYLLRKLSELSSG 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,829,268
Number of Sequences: 539616
Number of extensions: 2953063
Number of successful extensions: 9298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9166
Number of HSP's gapped (non-prelim): 77
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)