Query 027895
Match_columns 217
No_of_seqs 103 out of 472
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 04:13:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gim_A Pseudouridine-5'-phosph 100.0 1.1E-92 3.7E-97 643.5 17.7 212 1-212 97-334 (335)
2 4ex8_A ALNA; alpha/beta/alpha- 100.0 7.9E-92 2.7E-96 633.9 18.8 212 1-214 78-315 (316)
3 1vkm_A Conserved hypothetical 100.0 1.1E-86 3.9E-91 596.3 13.9 199 1-210 72-296 (297)
4 1mzh_A Deoxyribose-phosphate a 61.0 9.6 0.00033 31.7 4.6 18 41-58 135-152 (225)
5 3vkj_A Isopentenyl-diphosphate 56.0 22 0.00074 32.1 6.3 60 2-61 198-277 (368)
6 2dcl_A Hypothetical UPF0166 pr 50.1 16 0.00056 28.5 4.0 93 43-159 31-125 (127)
7 1vcv_A Probable deoxyribose-ph 46.3 37 0.0013 28.8 5.9 59 3-61 125-194 (226)
8 3qvo_A NMRA family protein; st 44.6 47 0.0016 26.3 6.0 63 52-121 24-87 (236)
9 1g99_A Acetate kinase; alpha/b 44.6 16 0.00055 34.0 3.7 60 2-61 258-333 (408)
10 1khd_A Anthranilate phosphorib 44.0 13 0.00046 33.3 2.9 134 2-135 59-231 (345)
11 1vqu_A Anthranilate phosphorib 35.8 21 0.00073 32.3 3.0 66 2-67 73-154 (374)
12 1o51_A Hypothetical protein TM 34.5 93 0.0032 23.6 6.0 72 44-139 36-109 (114)
13 1vcf_A Isopentenyl-diphosphate 33.7 80 0.0027 27.3 6.2 10 51-60 256-265 (332)
14 2dsj_A Pyrimidine-nucleoside ( 33.3 22 0.00076 33.1 2.7 87 2-88 49-150 (423)
15 2qjg_A Putative aldolase MJ040 33.0 63 0.0022 26.6 5.2 14 45-58 173-186 (273)
16 1ypf_A GMP reductase; GUAC, pu 32.7 54 0.0019 28.6 5.0 23 39-61 198-220 (336)
17 4fo4_A Inosine 5'-monophosphat 32.6 68 0.0023 28.9 5.7 23 39-61 196-221 (366)
18 3ffs_A Inosine-5-monophosphate 32.6 56 0.0019 29.9 5.2 58 4-61 194-256 (400)
19 3jwg_A HEN1, methyltransferase 32.4 1.7E+02 0.0058 22.4 7.8 90 70-160 58-182 (219)
20 2e1z_A Propionate kinase; TDCD 32.4 14 0.00049 34.4 1.2 60 2-61 266-341 (415)
21 2elc_A Trp D, anthranilate pho 32.2 28 0.00097 30.9 3.1 101 2-102 46-167 (329)
22 1vrd_A Inosine-5'-monophosphat 31.1 43 0.0015 30.5 4.2 25 37-61 323-350 (494)
23 3v46_A Cell division control p 30.0 12 0.00041 30.9 0.3 38 79-116 10-47 (170)
24 3h5q_A PYNP, pyrimidine-nucleo 29.8 41 0.0014 31.4 3.9 66 2-67 52-122 (436)
25 3edm_A Short chain dehydrogena 29.2 52 0.0018 26.7 4.0 98 48-154 5-116 (259)
26 3bbn_B Ribosomal protein S2; s 28.9 53 0.0018 28.1 4.1 25 128-165 157-181 (231)
27 3k30_A Histamine dehydrogenase 28.8 40 0.0014 32.0 3.7 62 142-210 144-219 (690)
28 3oid_A Enoyl-[acyl-carrier-pro 28.7 40 0.0014 27.5 3.3 47 107-154 60-111 (258)
29 4avf_A Inosine-5'-monophosphat 28.6 65 0.0022 29.8 5.0 59 3-61 279-342 (490)
30 3s83_A Ggdef family protein; s 28.6 39 0.0013 27.5 3.2 56 2-58 161-216 (259)
31 3dhn_A NAD-dependent epimerase 28.5 1.4E+02 0.0048 22.9 6.3 61 53-121 6-66 (227)
32 1gox_A (S)-2-hydroxy-acid oxid 28.2 90 0.0031 27.7 5.7 52 43-95 238-292 (370)
33 3khj_A Inosine-5-monophosphate 28.0 91 0.0031 27.8 5.7 57 3-61 154-217 (361)
34 1vhc_A Putative KHG/KDPG aldol 27.9 62 0.0021 26.9 4.3 32 46-89 151-184 (224)
35 2qr6_A IMP dehydrogenase/GMP r 27.8 52 0.0018 29.1 4.1 57 3-61 220-287 (393)
36 3kvo_A Hydroxysteroid dehydrog 27.4 1.3E+02 0.0044 26.1 6.5 98 49-154 43-158 (346)
37 3dii_A Short-chain dehydrogena 27.4 81 0.0028 25.3 4.8 94 53-154 4-104 (247)
38 3tox_A Short chain dehydrogena 27.0 38 0.0013 28.2 2.9 98 48-154 5-115 (280)
39 2yw3_A 4-hydroxy-2-oxoglutarat 27.0 90 0.0031 25.4 5.1 48 4-61 113-161 (207)
40 3e03_A Short chain dehydrogena 26.6 1.3E+02 0.0044 24.5 6.0 97 50-154 5-119 (274)
41 3ezl_A Acetoacetyl-COA reducta 26.5 1.3E+02 0.0043 23.9 5.8 46 108-154 70-120 (256)
42 1p4c_A L(+)-mandelate dehydrog 25.6 50 0.0017 29.6 3.5 64 38-103 234-298 (380)
43 1y0e_A Putative N-acetylmannos 25.4 72 0.0025 25.3 4.1 22 40-61 164-185 (223)
44 3lyl_A 3-oxoacyl-(acyl-carrier 25.2 1E+02 0.0035 24.4 5.0 97 50-154 4-111 (247)
45 3ngj_A Deoxyribose-phosphate a 24.9 78 0.0027 27.2 4.5 25 36-60 183-209 (239)
46 1hdo_A Biliverdin IX beta redu 24.7 2.1E+02 0.0073 21.1 7.4 61 52-120 4-65 (206)
47 4dvc_A Thiol:disulfide interch 24.6 46 0.0016 24.8 2.7 28 144-174 127-154 (184)
48 2bd0_A Sepiapterin reductase; 24.2 93 0.0032 24.4 4.6 13 53-65 4-16 (244)
49 4hkm_A Anthranilate phosphorib 24.0 41 0.0014 29.9 2.6 66 2-67 52-124 (346)
50 2tpt_A Thymidine phosphorylase 24.0 35 0.0012 31.8 2.2 89 2-90 50-156 (440)
51 1wbh_A KHG/KDPG aldolase; lyas 23.9 81 0.0028 25.9 4.3 32 46-89 150-183 (214)
52 3gem_A Short chain dehydrogena 23.9 1.2E+02 0.0042 24.6 5.4 97 49-154 25-127 (260)
53 3ijr_A Oxidoreductase, short c 23.8 87 0.003 26.0 4.5 97 49-154 45-155 (291)
54 3st7_A Capsular polysaccharide 23.6 2.6E+02 0.0088 23.4 7.5 42 53-94 2-58 (369)
55 2ehd_A Oxidoreductase, oxidore 23.4 78 0.0027 24.8 3.9 95 51-154 5-107 (234)
56 3hgj_A Chromate reductase; TIM 23.2 43 0.0015 29.5 2.5 68 142-210 140-214 (349)
57 1brw_A PYNP, protein (pyrimidi 23.1 53 0.0018 30.5 3.3 90 2-91 49-154 (433)
58 3qiv_A Short-chain dehydrogena 23.1 61 0.0021 25.8 3.3 96 50-154 8-118 (253)
59 1zem_A Xylitol dehydrogenase; 23.0 75 0.0026 25.7 3.8 17 49-65 5-21 (262)
60 3dc7_A Putative uncharacterize 22.9 2.6E+02 0.0089 21.5 9.4 94 43-142 43-142 (232)
61 3orf_A Dihydropteridine reduct 22.9 2.3E+02 0.0077 22.6 6.7 91 50-154 21-117 (251)
62 2i9z_A Putative septation prot 22.5 19 0.00064 27.7 0.1 35 134-172 63-97 (105)
63 3ucx_A Short chain dehydrogena 22.4 1.2E+02 0.004 24.6 4.9 97 49-154 9-118 (264)
64 1njg_A DNA polymerase III subu 22.1 2.4E+02 0.0084 20.8 6.8 36 144-185 185-220 (250)
65 1fmc_A 7 alpha-hydroxysteroid 22.0 75 0.0026 25.0 3.6 17 49-65 9-25 (255)
66 3gaf_A 7-alpha-hydroxysteroid 21.8 84 0.0029 25.4 3.9 96 50-154 11-117 (256)
67 2q2v_A Beta-D-hydroxybutyrate 21.8 1E+02 0.0035 24.7 4.4 15 51-65 4-18 (255)
68 1y0e_A Putative N-acetylmannos 21.7 1.1E+02 0.0038 24.1 4.6 54 128-183 3-56 (223)
69 3r8n_B 30S ribosomal protein S 21.3 93 0.0032 26.3 4.2 12 94-105 31-42 (218)
70 3vtz_A Glucose 1-dehydrogenase 21.3 1.8E+02 0.0063 23.6 6.0 93 50-154 13-110 (269)
71 3kru_A NADH:flavin oxidoreduct 21.2 28 0.00097 30.9 1.0 62 142-210 131-205 (343)
72 3sju_A Keto reductase; short-c 21.1 91 0.0031 25.6 4.0 46 108-154 80-130 (279)
73 3r1i_A Short-chain type dehydr 21.1 1.2E+02 0.0039 25.1 4.7 98 48-154 29-138 (276)
74 2z6i_A Trans-2-enoyl-ACP reduc 21.1 1.2E+02 0.004 26.2 4.9 17 45-61 156-172 (332)
75 3pvh_A UPF0603 protein AT1G547 21.0 1.4E+02 0.0048 23.1 5.0 35 111-145 60-98 (153)
76 2d1y_A Hypothetical protein TT 21.0 1.3E+02 0.0045 24.1 4.9 96 50-154 5-106 (256)
77 1ng6_A Hypothetical protein YQ 20.9 77 0.0026 24.9 3.4 41 143-186 94-134 (148)
78 3bos_A Putative DNA replicatio 20.8 2.8E+02 0.0095 21.0 8.2 48 147-205 177-224 (242)
79 2vqe_B 30S ribosomal protein S 20.8 1.2E+02 0.0041 26.4 4.8 26 127-165 157-182 (256)
80 1xu9_A Corticosteroid 11-beta- 20.6 92 0.0031 25.4 4.0 17 49-65 26-42 (286)
81 1n7k_A Deoxyribose-phosphate a 20.5 1.3E+02 0.0045 25.5 5.0 25 36-60 175-201 (234)
82 1yo6_A Putative carbonyl reduc 20.5 1.9E+02 0.0064 22.3 5.6 15 51-65 3-17 (250)
83 1uou_A Thymidine phosphorylase 20.5 53 0.0018 31.0 2.7 90 2-91 76-182 (474)
84 4fxs_A Inosine-5'-monophosphat 20.4 1.5E+02 0.0051 27.5 5.7 56 4-61 282-344 (496)
85 1mxs_A KDPG aldolase; 2-keto-3 20.3 82 0.0028 26.2 3.6 16 46-61 160-176 (225)
86 3biy_A Histone acetyltransfera 20.3 2.4E+02 0.0081 26.0 6.9 55 114-168 130-196 (380)
87 3nzq_A ADC, biosynthetic argin 20.2 2E+02 0.0067 28.1 6.7 78 80-157 161-258 (666)
88 1me8_A Inosine-5'-monophosphat 20.0 1E+02 0.0035 28.4 4.5 26 36-61 328-362 (503)
No 1
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=100.00 E-value=1.1e-92 Score=643.47 Aligned_cols=212 Identities=50% Similarity=0.728 Sum_probs=208.2
Q ss_pred CCCCHHHHHHHHhcCCCCccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCcccccccccchhhh
Q 027895 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (217)
Q Consensus 1 vGl~~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL 80 (217)
|||+++|||+||+.++++.|+|||||++++++|++||||||+||++|++|||+||+||||||||||+++|||||+||+||
T Consensus 97 vGL~~~ele~la~~~~~v~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~AGI~VFaTGGIGGVHRgae~t~DISADL~eL 176 (335)
T 4gim_A 97 VGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL 176 (335)
T ss_dssp ESCCHHHHHHHHHHGGGSEEECTTTHHHHHHTTCCEEECHHHHHHHHHHTTCCEEECSCCCCBBTTHHHHCCBCHHHHHH
T ss_pred EcCCHHHHHHHHhcCCCceeeecccHHHHhhcCCCccccHHHHHHHHHHCCCcEEeeCCcCccCCCCCCCccccchHHHh
Confidence 79999999999976567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccccccccccccc--------------------------ccccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 027895 81 GRTPVAVVSAGIKSILDIPRTLEYL--------------------------VPCRVDSPEDCARLIDVNMKLKLGSGLVI 134 (217)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TlE~L--------------------------~~~~~d~~~e~A~~~~~~~~l~l~~g~lv 134 (217)
+||||+|||||+|||||||+||||| +|+|+|+++|+|++++++|++++++|+||
T Consensus 177 arTpV~VVcAG~KSILDi~~TLE~LET~GVpVvgy~td~fPaFy~r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~~g~lv 256 (335)
T 4gim_A 177 ANTNVTVVCAGAASILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVV 256 (335)
T ss_dssp HHSCCEEEECBCCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTBSCCSSBCSEEECCHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ccCCeEEEeecchhhccchhHHHHHHhcCceEEEecCCCCceeeccCCCCcCcceeCCHHHHHHHHHHHHHcCCCCceEE
Confidence 9999999999999999999999999 88999999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027895 135 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLR 212 (217)
Q Consensus 135 anPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~Sl~aNiaLl~nNa~laa~IA~~~~~~~ 212 (217)
+||||+|+++|+++|+++|++|++||+++||+||++|||||++|+|+|+|+|+++|++||+|||++|++||++|++|.
T Consensus 257 anPIP~e~~i~~~~i~~~I~~Al~eA~~~gI~Gk~vTPfLL~~i~elT~G~Sl~aNiaLv~nNA~laa~IA~~l~~L~ 334 (335)
T 4gim_A 257 ANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLA 334 (335)
T ss_dssp ECCCCGGGCCCHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eCCCCchhcCCHHHHHHHHHHHHHHHHHcCCcCCccChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874
No 2
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=100.00 E-value=7.9e-92 Score=633.86 Aligned_cols=212 Identities=36% Similarity=0.560 Sum_probs=208.0
Q ss_pred CCCCHHHHHHHHhcCCCCccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCcccccccccchhhh
Q 027895 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (217)
Q Consensus 1 vGl~~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL 80 (217)
|||+++|||+|++. +++.|+|||||++++++|++||||||+||++|++|||+||+||||||||||+++|||||+||+||
T Consensus 78 VGL~~~eLe~la~~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~lA~~AGI~VFaTGGiGGVHRgae~t~DISaDL~eL 156 (316)
T 4ex8_A 78 VGLTDSLIERFAST-KGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQF 156 (316)
T ss_dssp ESCCHHHHHHHHHC-TTCCEECGGGHHHHHHHCSCBEECHHHHHHHHHHHTCCEEECSCBCCBBTTHHHHCCBCTHHHHT
T ss_pred EcCCHHHHHHHhcC-CCccccchhhHHHHHhCCCCccccHHHHHHHHHHCCCcEEEeCCccccCCCCCCCcchhhhHHHh
Confidence 79999999999985 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccccccccccccc--------------------------ccccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 027895 81 GRTPVAVVSAGIKSILDIPRTLEYL--------------------------VPCRVDSPEDCARLIDVNMKLKLGSGLVI 134 (217)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TlE~L--------------------------~~~~~d~~~e~A~~~~~~~~l~l~~g~lv 134 (217)
+||||+|||||+|||||||+||||| +| ++|+++|+|++++++|+||+++|+||
T Consensus 157 arTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~td~fPaFy~r~Sg~~~p-r~d~~~e~A~~~~a~~~lgl~~g~lv 235 (316)
T 4ex8_A 157 RKTKMTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVT-RMDDLHTAARAAEAHWQVNGPGTVLL 235 (316)
T ss_dssp TTCCEEEEESBBCTTBCHHHHHHHHHHTTCCEEEETCSBCCBTTBSCCSCBCE-EESSHHHHHHHHHHHHHHHCSCEEEE
T ss_pred cCCCeEEEecccchhhcchHHHHHHHhCCceEEEecCCCCceeeeCCCCCcCC-CCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 9999999999999999999999999 78 99999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027895 135 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQLRQQ 214 (217)
Q Consensus 135 anPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~Sl~aNiaLl~nNa~laa~IA~~~~~~~~~ 214 (217)
+||||+|+++|+++|+.+|++|++||+++||+||++|||||++|+|+|+|+|+++|++||+|||++|++||++|+++.++
T Consensus 236 anPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~vTPfLL~~i~elT~G~Sl~aNiaLv~nNa~laa~IA~~l~~l~~~ 315 (316)
T 4ex8_A 236 TSPIDEQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAVQAE 315 (316)
T ss_dssp ECCCCGGGCCCHHHHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EcCCChhhcCCHHHHHHHHHHHHHHHHHcCCccccCCHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
No 3
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=100.00 E-value=1.1e-86 Score=596.32 Aligned_cols=199 Identities=40% Similarity=0.611 Sum_probs=194.1
Q ss_pred CCCCHHHHHHHHhcCCCCccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCcccccccccchhhh
Q 027895 1 MRLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTEL 80 (217)
Q Consensus 1 vGl~~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL 80 (217)
|||+++|||+|+ . +++.|+|||||++++++|.+||||||+||++|++|||+||+|||||||||| |||||+||+||
T Consensus 72 VGL~~~eLe~la-~-~~~~K~SrRDl~~~~a~g~~GaTTVaaTm~lA~~AGI~VFaTGGiGGVHRg---t~DISaDL~eL 146 (297)
T 1vkm_A 72 AGMSEEELEAMM-R-EGADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVHPG---RVDVSQDLTEM 146 (297)
T ss_dssp ESCCHHHHHHHH-H-HCCEEECGGGHHHHHHHTCCEEECHHHHHHHHHHHTCCEEECSCBCCBCTT---SSCBCHHHHHH
T ss_pred ECCCHHHHHHHh-c-CCCccccHhhHHHHHhCCCCchhhHHHHHHHHHHcCCcEEEecccccccCC---CcccchhHHHh
Confidence 799999999999 4 579999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCCCeEEEecccccccccccccccc--------------------------ccccCCCHHHHHHHHHHHHhcCCCCeEEE
Q 027895 81 GRTPVAVVSAGIKSILDIPRTLEYL--------------------------VPCRVDSPEDCARLIDVNMKLKLGSGLVI 134 (217)
Q Consensus 81 ~rtpV~VVcaG~KsILDi~~TlE~L--------------------------~~~~~d~~~e~A~~~~~~~~l~l~~g~lv 134 (217)
+||||+|||||+|||||||+||||| +| |+|+++|+|++++++|+|++++|+||
T Consensus 147 ~rTpV~VVcaG~KsILDi~~TLE~LET~GV~Vvgy~t~~fPaF~tr~Sg~~~p-~~d~~~e~A~~~~~~~~lgl~~g~lv 225 (297)
T 1vkm_A 147 SSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMV 225 (297)
T ss_dssp TTCCEEEEESBBCTTSCHHHHHHHHHHTTCCEEEESCSBCCBTTBSCCSCBCC-EECSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCeEEEecccchhhcchhHHHHHHhCCceEEEecCCCCCceecCCCCCcCC-CCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 9999999999999999999999999 77 99999999999999999999999999
Q ss_pred EeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 027895 135 GVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKISVALAQ 210 (217)
Q Consensus 135 anPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~Sl~aNiaLl~nNa~laa~IA~~~~~ 210 (217)
+||||+|+++|+++|+++|++|++| |+||++|||||++|+|+|+|+|+++|++||+|||++|++||++|++
T Consensus 226 anPiP~e~~~~~~~i~~~I~~Al~e-----i~Gk~vTPflL~~i~elT~G~Sl~aNiaLv~nNa~laa~IA~~l~~ 296 (297)
T 1vkm_A 226 LNPVPEEYEIPHDEIERLLEKIELE-----VEGKEVTPFLLKKLVEMTNGRTLKANLALLEENVKLAGEIAVKLKR 296 (297)
T ss_dssp ECCCCGGGCCCHHHHHHHHHTCCCC-----CCGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EcCCChhhcCCHHHHHHHHHHHHHH-----hhCcccChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 9999999999999999999999999999999999999999999864
No 4
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=60.97 E-value=9.6 Score=31.67 Aligned_cols=18 Identities=11% Similarity=0.062 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCcEEEec
Q 027895 41 SATMFFASMVGIPVFVTG 58 (217)
Q Consensus 41 aaTm~lA~~aGI~VFaTG 58 (217)
.-...+|..+|++.+.|-
T Consensus 135 ~~~a~~a~eaGad~I~ts 152 (225)
T 1mzh_A 135 KKAVEICIEAGADFIKTS 152 (225)
T ss_dssp HHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHhCCCEEEEC
Confidence 334455566677766654
No 5
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=56.04 E-value=22 Score=32.12 Aligned_cols=60 Identities=27% Similarity=0.202 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhcCCCCccccc------------cch-----HHHH--hcCCCchhhHHHHHHHHHHCC-CcEEEecccc
Q 027895 2 RLSTEELERLAKLGSKAQKTAR------------RDI-----AHVV--ATRGNGATTVSATMFFASMVG-IPVFVTGGIG 61 (217)
Q Consensus 2 Gl~~~ele~la~~~~~~~K~Sr------------RDl-----~~~~--a~~~~GaTTVaaTm~lA~~aG-I~VFaTGGiG 61 (217)
|++.++.+++.+.+-+...++- |-. ...+ ...-+|-.|+.+...++...+ |+|+++|||-
T Consensus 198 g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~ 277 (368)
T 3vkj_A 198 GISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIR 277 (368)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCC
T ss_pred CCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCC
Confidence 4777777777766545555532 211 0011 122346667767677777775 9999998774
No 6
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=50.15 E-value=16 Score=28.51 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=46.4
Q ss_pred HHHHHHHCCCc-EEEecccccccCCcccccccccchhhhc-CCCeEEEeccccccccccccccccccccCCCHHHHHHHH
Q 027895 43 TMFFASMVGIP-VFVTGGIGGVHRHGEHTMDISSDLTELG-RTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDCARLI 120 (217)
Q Consensus 43 Tm~lA~~aGI~-VFaTGGiGGVHrga~~t~DiSaDL~eL~-rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~A~~~ 120 (217)
-+..++.+||. .=+.-|+.|-.+.+. ==++++-+|+ .-||+|+| +|+++.+.+++
T Consensus 31 Iv~~a~~~GiaGaTV~rgi~GfG~~g~---ih~~~~l~ls~dlPVvIe~--------------------Vd~~eki~~~l 87 (127)
T 2dcl_A 31 IVEKLREMGIAGATVYRGIYGFGKKSR---VHSSDVIRLSTDLPIIVEV--------------------VDRGHNIEKVV 87 (127)
T ss_dssp HHHHHHHTTCSCEEEEECSEEEC-----------------CCCEEEEEE--------------------EEEHHHHHHHH
T ss_pred HHHHHHHCCCCeEEEEcCcEEECCCCC---EecceeeecCCCCCEEEEE--------------------EcCHHHHHHHH
Confidence 35667777775 455667777644322 1355666777 56899987 57889999988
Q ss_pred HHHHhcCCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHH
Q 027895 121 DVNMKLKLGSGLVIGVPIPREHAASGRVIESAIQSALRE 159 (217)
Q Consensus 121 ~~~~~l~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~e 159 (217)
..-..+ ++.|+++.-++.--..-.+.++...=+.|++|
T Consensus 88 ~~l~~l-v~~GlVt~e~Vev~~~~~~~~~~~~~~~~~~~ 125 (127)
T 2dcl_A 88 NVIKPM-IKDGMITVEPTIVLWVGTQEEIKKFEEDAIAE 125 (127)
T ss_dssp HHHTTT-CSSSEEEEEECEEEECCSSCC-----------
T ss_pred HHHHHH-hCCCEEEEEEEEEEEecCCCceeEehhhhhhh
Confidence 776666 56898888776543222222444444455443
No 7
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=46.31 E-value=37 Score=28.82 Aligned_cols=59 Identities=24% Similarity=0.196 Sum_probs=42.2
Q ss_pred CCHHHHHHHHh----cCCCCcccc--ccchHHHHhcCCCchhhHHHHHHHHHH---CC--CcEEEecccc
Q 027895 3 LSTEELERLAK----LGSKAQKTA--RRDIAHVVATRGNGATTVSATMFFASM---VG--IPVFVTGGIG 61 (217)
Q Consensus 3 l~~~ele~la~----~~~~~~K~S--rRDl~~~~a~~~~GaTTVaaTm~lA~~---aG--I~VFaTGGiG 61 (217)
|+++|+.+.++ .+.+..|.| --.-.|.-..+..||.|+...-.+.+. .| ++|-+.|||-
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGir 194 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIR 194 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 46677666554 235678888 334556667777899999887777777 77 8999998764
No 8
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=44.64 E-value=47 Score=26.34 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=30.4
Q ss_pred CcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-cccccccccccCCCHHHHHHHHH
Q 027895 52 IPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-PRTLEYLVPCRVDSPEDCARLID 121 (217)
Q Consensus 52 I~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-~~TlE~L~~~~~d~~~e~A~~~~ 121 (217)
=+|++|||-||+-+. +..-|.+-+...|.+++-.+...-++ +..+++ ....+.+++++.+++.
T Consensus 24 k~vlVtGatG~iG~~------l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~ 87 (236)
T 3qvo_A 24 KNVLILGAGGQIARH------VINQLADKQTIKQTLFARQPAKIHKPYPTNSQI-IMGDVLNHAALKQAMQ 87 (236)
T ss_dssp EEEEEETTTSHHHHH------HHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEE-EECCTTCHHHHHHHHT
T ss_pred cEEEEEeCCcHHHHH------HHHHHHhCCCceEEEEEcChhhhcccccCCcEE-EEecCCCHHHHHHHhc
Confidence 369999999998442 22222222222333333322221111 112222 2345667888877664
No 9
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=44.60 E-value=16 Score=33.96 Aligned_cols=60 Identities=27% Similarity=0.328 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhcCCCCccc-----cccchHHHHhcCCCchhh--------HHH--HHHHHHHCCCc-EEEecccc
Q 027895 2 RLSTEELERLAKLGSKAQKT-----ARRDIAHVVATRGNGATT--------VSA--TMFFASMVGIP-VFVTGGIG 61 (217)
Q Consensus 2 Gl~~~ele~la~~~~~~~K~-----SrRDl~~~~a~~~~GaTT--------Vaa--Tm~lA~~aGI~-VFaTGGiG 61 (217)
|+|.+|++.+-.......-+ +-|||......+-.-+.- ++- -.+.|.+-|++ +.-|||||
T Consensus 258 ~~s~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTgGIG 333 (408)
T 1g99_A 258 GLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIG 333 (408)
T ss_dssp TCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHH
T ss_pred CCCHHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEECcccc
Confidence 68889998887654344433 347776666554322221 111 11455667888 55699999
No 10
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=43.99 E-value=13 Score=33.30 Aligned_cols=134 Identities=24% Similarity=0.289 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHhcC-CCCccccc--cchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEeccccccc-CCccc-----
Q 027895 2 RLSTEELERLAKLG-SKAQKTAR--RDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVH-RHGEH----- 69 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~Sr--RDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGiGGVH-rga~~----- 69 (217)
|+|.+||.-+++.- +...++.. .+.-..+..+.+|.-| --.+.+++..+|+||.-.|+=+=-| +++..
T Consensus 59 get~eEiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLea 138 (345)
T 1khd_A 59 GERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQA 138 (345)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHh
Confidence 78999999887521 12223322 1222245567777766 5566788889999999999876556 65411
Q ss_pred -ccccccchhh----hcCCCeEEEec-----ccccccccccccc---------cc-ccc-------cCCCHHHHHHHHHH
Q 027895 70 -TMDISSDLTE----LGRTPVAVVSA-----GIKSILDIPRTLE---------YL-VPC-------RVDSPEDCARLIDV 122 (217)
Q Consensus 70 -t~DiSaDL~e----L~rtpV~VVca-----G~KsILDi~~TlE---------~L-~~~-------~~d~~~e~A~~~~~ 122 (217)
.++++.+..+ |.++.++.+-+ .-|.+..+.+.|- -| .|. .+-+++.+-.+...
T Consensus 139 LGv~~~~~~~~~~~~l~~~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~v~GV~~~~~~~~~a~~ 218 (345)
T 1khd_A 139 FGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQA 218 (345)
T ss_dssp TTCCTTCCHHHHHHHHHHHSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSGGGHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeEEEeecCHHHHHHHHHH
Confidence 1112222221 45667777543 4455555544321 11 221 12234443334444
Q ss_pred HHhcCCCCeEEEE
Q 027895 123 NMKLKLGSGLVIG 135 (217)
Q Consensus 123 ~~~l~l~~g~lva 135 (217)
-..+|.+.++||.
T Consensus 219 l~~lG~~~a~vv~ 231 (345)
T 1khd_A 219 LKVLGYKNAAVVH 231 (345)
T ss_dssp HHHTTCSEEEEEE
T ss_pred HHHhCCCeEEEEe
Confidence 4558887788777
No 11
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=35.82 E-value=21 Score=32.35 Aligned_cols=66 Identities=27% Similarity=0.428 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHhcC-CCCccc----------cc--cchHHHHhcCCCchhh--H-HHHHHHHHHCCCcEEEecccccccC
Q 027895 2 RLSTEELERLAKLG-SKAQKT----------AR--RDIAHVVATRGNGATT--V-SATMFFASMVGIPVFVTGGIGGVHR 65 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~----------Sr--RDl~~~~a~~~~GaTT--V-aaTm~lA~~aGI~VFaTGGiGGVHr 65 (217)
|+|.+||.-+++.= +...++ +. .++-..+..|.+|.-| + -.+.+++..+|+||.-.|+=+=-|+
T Consensus 73 Get~eEiag~~~am~~~~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~ 152 (374)
T 1vqu_A 73 GVSADELTGMAEVLQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSL 152 (374)
T ss_dssp CCCHHHHHHHHHHHHTTCCC-----------CCSSSCCEEEEECC---CCBCCHHHHHHHHHHHTTCCEEEEEECC--CT
T ss_pred CCCHHHHHHHHHHHHHhCCccccccccccCccccCCCeeEEeCCCCCCCCccchHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 78999999887521 122333 21 1111125667777666 2 2445788889999999998776566
Q ss_pred Cc
Q 027895 66 HG 67 (217)
Q Consensus 66 ga 67 (217)
++
T Consensus 153 ~G 154 (374)
T 1vqu_A 153 TG 154 (374)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 12
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=34.51 E-value=93 Score=23.60 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=41.2
Q ss_pred HHHHHHCCCc-EEEecccccccCCcccccccccchhhhc-CCCeEEEeccccccccccccccccccccCCCHHHHHHHHH
Q 027895 44 MFFASMVGIP-VFVTGGIGGVHRHGEHTMDISSDLTELG-RTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDCARLID 121 (217)
Q Consensus 44 m~lA~~aGI~-VFaTGGiGGVHrga~~t~DiSaDL~eL~-rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~A~~~~ 121 (217)
+..++.+||. .=+.-|+.|--+.+. ==++++-+|+ .-||+|+| +|+++.+.+++.
T Consensus 36 v~~~~~~GiaGaTV~rgi~GfG~~g~---ih~~~~l~ls~dlPV~Ie~--------------------Vd~~eki~~~l~ 92 (114)
T 1o51_A 36 VKRAYELGMKGVTVYRGIMGFGHKRH---MHRSDFFSLSPDLPIVLEI--------------------VDEEERINLFLK 92 (114)
T ss_dssp HHHHHHTTCSCCEEEECSCCCCC----------------CCCEEEEEE--------------------EECHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEEcCcEEECCCCC---EEccceeecCCCCCEEEEE--------------------EcCHHHHHHHHH
Confidence 4556666765 334466776544321 1256667777 57899887 578999999887
Q ss_pred HHHhcCCCCeEEEEeCCC
Q 027895 122 VNMKLKLGSGLVIGVPIP 139 (217)
Q Consensus 122 ~~~~l~l~~g~lvanPiP 139 (217)
.-..+ ++.|+++..++.
T Consensus 93 ~l~~~-v~~Glvt~e~V~ 109 (114)
T 1o51_A 93 EIDNI-DFDGLVFTADVN 109 (114)
T ss_dssp HHHTC-CCCSEEEEEEEE
T ss_pred HHHHH-hCCCEEEEEEEE
Confidence 76666 567888876653
No 13
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=33.65 E-value=80 Score=27.29 Aligned_cols=10 Identities=30% Similarity=0.959 Sum_probs=4.7
Q ss_pred CCcEEEeccc
Q 027895 51 GIPVFVTGGI 60 (217)
Q Consensus 51 GI~VFaTGGi 60 (217)
+|+|+++|||
T Consensus 256 ~ipvia~GGI 265 (332)
T 1vcf_A 256 HLPLVASGGV 265 (332)
T ss_dssp SSCEEEESSC
T ss_pred CCeEEEECCC
Confidence 3555555443
No 14
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=33.32 E-value=22 Score=33.07 Aligned_cols=87 Identities=14% Similarity=0.059 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHhc-CCCCccccccc---hHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCccc-------c
Q 027895 2 RLSTEELERLAKL-GSKAQKTARRD---IAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEH-------T 70 (217)
Q Consensus 2 Gl~~~ele~la~~-~~~~~K~SrRD---l~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~-------t 70 (217)
|+|.+|+..|++. -+...++...+ +-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++.- .
T Consensus 49 Get~eEiag~a~aM~~~~~~l~~~~~~~~vD~~gTGGdG~niSt~~a~vvAa~Gv~VaKhGnR~~ss~~GsaDvLEaL~G 128 (423)
T 2dsj_A 49 GLDPEETLWLTETMARSGKVLDLSGLPHPVDKHSSGGVGDKVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDKLESVPG 128 (423)
T ss_dssp CCCHHHHHHHHHHHHTSSBCCCCTTSSSBEEEEEESSSCCSTHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTT
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCceeEecCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHhCCC
Confidence 7899999988852 01223332222 11223566666644446678899999999999995544666521 2
Q ss_pred cccccchh----hhcCCCeEEE
Q 027895 71 MDISSDLT----ELGRTPVAVV 88 (217)
Q Consensus 71 ~DiSaDL~----eL~rtpV~VV 88 (217)
+++..+.. .|.++-++++
T Consensus 129 v~i~l~~e~~~~~l~~~Gi~f~ 150 (423)
T 2dsj_A 129 WRGEMTEAEFLERARRVGLVIA 150 (423)
T ss_dssp CCCCCCHHHHHHHHHHTSEEEE
T ss_pred CCCCCCHHHHHHHHHHcCEEEE
Confidence 23332222 2667888885
No 15
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=32.96 E-value=63 Score=26.63 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=6.4
Q ss_pred HHHHHCCCcEEEec
Q 027895 45 FFASMVGIPVFVTG 58 (217)
Q Consensus 45 ~lA~~aGI~VFaTG 58 (217)
..|..+|..+..|+
T Consensus 173 ~~a~~~Gad~i~~~ 186 (273)
T 2qjg_A 173 RLGAELGADIVKTS 186 (273)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 34444454444444
No 16
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=32.71 E-value=54 Score=28.59 Aligned_cols=23 Identities=26% Similarity=0.484 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHCCCcEEEecccc
Q 027895 39 TVSATMFFASMVGIPVFVTGGIG 61 (217)
Q Consensus 39 TVaaTm~lA~~aGI~VFaTGGiG 61 (217)
|......++...+|||++.|||.
T Consensus 198 ~~~~l~~v~~~~~ipVIa~GGI~ 220 (336)
T 1ypf_A 198 QLAALRWCAKAASKPIIADGGIR 220 (336)
T ss_dssp HHHHHHHHHHTCSSCEEEESCCC
T ss_pred HHHHHHHHHHHcCCcEEEeCCCC
Confidence 34444445555555555555443
No 17
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=32.61 E-value=68 Score=28.88 Aligned_cols=23 Identities=39% Similarity=0.551 Sum_probs=15.6
Q ss_pred hHHHHHHHH---HHCCCcEEEecccc
Q 027895 39 TVSATMFFA---SMVGIPVFVTGGIG 61 (217)
Q Consensus 39 TVaaTm~lA---~~aGI~VFaTGGiG 61 (217)
++.....++ +..+|||++.|||.
T Consensus 196 ~~~~l~~v~~~~~~~~iPVIA~GGI~ 221 (366)
T 4fo4_A 196 QITAIADAAGVANEYGIPVIADGGIR 221 (366)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred hHHHHHHHHHHHhhcCCeEEEeCCCC
Confidence 344444444 35699999999995
No 18
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=32.57 E-value=56 Score=29.93 Aligned_cols=58 Identities=24% Similarity=0.361 Sum_probs=30.6
Q ss_pred CHHHHHHHHhcCCCCccccccchHHHHh--cCCCchhhHHHHHHHHHH---CCCcEEEecccc
Q 027895 4 STEELERLAKLGSKAQKTARRDIAHVVA--TRGNGATTVSATMFFASM---VGIPVFVTGGIG 61 (217)
Q Consensus 4 ~~~ele~la~~~~~~~K~SrRDl~~~~a--~~~~GaTTVaaTm~lA~~---aGI~VFaTGGiG 61 (217)
|.++.+.+.+.+-+..+++--.=..... ....|..+......++.. .+|||++.|||.
T Consensus 194 t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~ 256 (400)
T 3ffs_A 194 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIR 256 (400)
T ss_dssp SHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCC
Confidence 4566666665555566663211000000 112344566666666654 589999999885
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=32.42 E-value=1.7e+02 Score=22.42 Aligned_cols=90 Identities=8% Similarity=0.054 Sum_probs=49.4
Q ss_pred ccccccchhhhcCC-------------CeEEEecccccccccccccccc----ccccCCCHHHHHHHHHHHHhcCCCCeE
Q 027895 70 TMDISSDLTELGRT-------------PVAVVSAGIKSILDIPRTLEYL----VPCRVDSPEDCARLIDVNMKLKLGSGL 132 (217)
Q Consensus 70 t~DiSaDL~eL~rt-------------pV~VVcaG~KsILDi~~TlE~L----~~~~~d~~~e~A~~~~~~~~l~l~~g~ 132 (217)
..|+|.+..+.++. .+-+++.-....-.-..+..+. +-+.++ ..+..+++..-.++--++|+
T Consensus 58 gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~ 136 (219)
T 3jwg_A 58 GVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLD-ENRLQAFEKVLFEFTRPQTV 136 (219)
T ss_dssp EEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEE
T ss_pred EEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCC-HHHHHHHHHHHHHhhCCCEE
Confidence 46899888887753 5677766432111111222222 112233 33344555544444447899
Q ss_pred EEEeCCCcC------------------CCCChHHHHHHHHHHHHHH
Q 027895 133 VIGVPIPRE------------------HAASGRVIESAIQSALREA 160 (217)
Q Consensus 133 lvanPiP~e------------------~~~~~~~i~~~I~~Al~eA 160 (217)
++..|-.+. +...++++.+++++.++++
T Consensus 137 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 182 (219)
T 3jwg_A 137 IVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKY 182 (219)
T ss_dssp EEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHH
T ss_pred EEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHC
Confidence 998876532 1147788888888777655
No 20
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=32.38 E-value=14 Score=34.42 Aligned_cols=60 Identities=22% Similarity=0.231 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhcCCCCccc-----cccchHHHHhcCCCchhh--------HHHH--HHHHHHCCCc-EEEecccc
Q 027895 2 RLSTEELERLAKLGSKAQKT-----ARRDIAHVVATRGNGATT--------VSAT--MFFASMVGIP-VFVTGGIG 61 (217)
Q Consensus 2 Gl~~~ele~la~~~~~~~K~-----SrRDl~~~~a~~~~GaTT--------VaaT--m~lA~~aGI~-VFaTGGiG 61 (217)
|+|.+|++.+-.......-+ +-|||......+-.-+.- ++-. .+.|.+-|++ +.-|||||
T Consensus 266 g~s~~ev~~~Lnk~SGLlGlsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIG 341 (415)
T 2e1z_A 266 GQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIG 341 (415)
T ss_dssp CCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHH
T ss_pred CCCHHHHHHHHhhccCcEEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccc
Confidence 67888888887654344433 347776666554322221 1111 1344556788 56699999
No 21
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=32.20 E-value=28 Score=30.92 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=55.3
Q ss_pred CCCHHHHHHHHhcC---CCCccccccchHHHHhcCCCchhh---HHHHHHHHHHCCCcEEEecccccccCCccc------
Q 027895 2 RLSTEELERLAKLG---SKAQKTARRDIAHVVATRGNGATT---VSATMFFASMVGIPVFVTGGIGGVHRHGEH------ 69 (217)
Q Consensus 2 Gl~~~ele~la~~~---~~~~K~SrRDl~~~~a~~~~GaTT---VaaTm~lA~~aGI~VFaTGGiGGVHrga~~------ 69 (217)
|+|.+||.-+++.- ......+..++-..+..+..|.-| --.+.+++..+|+||.-.|+=+=-|+++..
T Consensus 46 get~~Eiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaL 125 (329)
T 2elc_A 46 GERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEAL 125 (329)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCCCSSEEEEEECCCCSSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCeeEEcCCCCCCCCccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhC
Confidence 78999999887520 112223312222233555556555 223467888899999999987766775421
Q ss_pred ccccccchhh----hcCCCeEEEec-----cccccccccccc
Q 027895 70 TMDISSDLTE----LGRTPVAVVSA-----GIKSILDIPRTL 102 (217)
Q Consensus 70 t~DiSaDL~e----L~rtpV~VVca-----G~KsILDi~~Tl 102 (217)
.+++..+..+ |.++.++.+-+ ..|.+..+.+.|
T Consensus 126 G~~~~~~~~~~~~~l~~~g~~fl~a~~~hPa~k~~~~~R~~l 167 (329)
T 2elc_A 126 GVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAEL 167 (329)
T ss_dssp TCCTTCCHHHHHHHHHHHSEEEEEHHHHCGGGGGTHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCEEEEEhHHhCHHHHHHHHHHHHh
Confidence 1111112111 44566777644 345555555444
No 22
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=31.14 E-value=43 Score=30.52 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=14.3
Q ss_pred hhhHHHHHHHHHH---CCCcEEEecccc
Q 027895 37 ATTVSATMFFASM---VGIPVFVTGGIG 61 (217)
Q Consensus 37 aTTVaaTm~lA~~---aGI~VFaTGGiG 61 (217)
..+......++.. .+|||++.|||.
T Consensus 323 ~p~~~~l~~v~~~~~~~~ipvia~GGI~ 350 (494)
T 1vrd_A 323 VPQLTAVMECSEVARKYDVPIIADGGIR 350 (494)
T ss_dssp CCHHHHHHHHHHHHHTTTCCEEEESCCC
T ss_pred ccHHHHHHHHHHHHhhcCCCEEEECCcC
Confidence 3344444444433 478888887764
No 23
>3v46_A Cell division control protein 73; RAS-like fold, non-GTP binding, protein interaction surface, transcription elongation factor; 1.55A {Saccharomyces cerevisiae} PDB: 4dm4_A
Probab=30.04 E-value=12 Score=30.90 Aligned_cols=38 Identities=16% Similarity=0.408 Sum_probs=31.5
Q ss_pred hhcCCCeEEEeccccccccccccccccccccCCCHHHH
Q 027895 79 ELGRTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDC 116 (217)
Q Consensus 79 eL~rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~ 116 (217)
.-.++|+++|++++.|+|-+--==|+|.+.++-++++.
T Consensus 10 ~~~~~PIIiVp~s~sSlitm~NiK~FLedg~fv~~~~~ 47 (170)
T 3v46_A 10 GPRKDPIILIPSAASSILTVANIKQFLLESKYVNPRNL 47 (170)
T ss_dssp -CCSCCEEECCCCTTCSSCTTTHHHHHHHCCCCCGGGS
T ss_pred CCCCCCEEEECCCccchhhHHHHHHHHhcCeecChhhc
Confidence 34689999999999999999999999977777776653
No 24
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=29.85 E-value=41 Score=31.37 Aligned_cols=66 Identities=21% Similarity=0.171 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHhcC-CCCcccccc----chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCc
Q 027895 2 RLSTEELERLAKLG-SKAQKTARR----DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHG 67 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~SrR----Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga 67 (217)
|+|.+||..|++.= +...++.-. .+-..+..+..|--|--...+++..+|++|.-.||=+=-|+++
T Consensus 52 Get~eEiag~~~Am~~~~~~~~~~~~~~~~vD~~gTGGdG~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~G 122 (436)
T 3h5q_A 52 DMNDDERVALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGG 122 (436)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCTTSCSCCEEEEECCCTTCCHHHHHHHHHHHTTCCEEEECCCCSSSSCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCccccCCCceeecCCCCCCCChHHHHHHHHHhCCCCEEeECCCCCCCccc
Confidence 78999999887631 122222221 1112234555565554445677788999999999877557654
No 25
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=29.21 E-value=52 Score=26.74 Aligned_cols=98 Identities=11% Similarity=0.132 Sum_probs=47.0
Q ss_pred HHCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccc--------cccccccccccccccCCCHHHHHHH
Q 027895 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKS--------ILDIPRTLEYLVPCRVDSPEDCARL 119 (217)
Q Consensus 48 ~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~Ks--------ILDi~~TlE~L~~~~~d~~~e~A~~ 119 (217)
.+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++..... +-..+....+ ...-+.+++++.++
T Consensus 5 ~l~~k~vlVTGas~GIG~------aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~ 76 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGR------ACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLGRSALA-IKADLTNAAEVEAA 76 (259)
T ss_dssp TTTTCEEEEETTTSHHHH------HHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTTSCCEE-EECCTTCHHHHHHH
T ss_pred CCCCCEEEEECCCchHHH------HHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEE-EEcCCCCHHHHHHH
Confidence 345667899999999844 2333333322 123333221111 1111112222 23456678888777
Q ss_pred HHHH-HhcCCCCeEEEEeC----CC-cCCCCChHHHHHHHH
Q 027895 120 IDVN-MKLKLGSGLVIGVP----IP-REHAASGRVIESAIQ 154 (217)
Q Consensus 120 ~~~~-~~l~l~~g~lvanP----iP-~e~~~~~~~i~~~I~ 154 (217)
+..- +++| +=-+||.|. .+ .-...+.+.+++.++
T Consensus 77 ~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 77 ISAAADKFG-EIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHHHHHHC-SEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHhC-CCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 7532 3333 223455553 11 122467777776655
No 26
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=28.94 E-value=53 Score=28.10 Aligned_cols=25 Identities=28% Similarity=0.185 Sum_probs=18.5
Q ss_pred CCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 027895 128 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 165 (217)
Q Consensus 128 l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~eA~~~gi 165 (217)
+|.-++|.+|..+ .+|+.||...||
T Consensus 157 ~Pdll~v~Dp~~e-------------~~ai~EA~~l~I 181 (231)
T 3bbn_B 157 LPDIVIIVDQQEE-------------YTALRECITLGI 181 (231)
T ss_dssp CCSEEEESCTTTT-------------HHHHHHHHTTTC
T ss_pred CCCEEEEeCCccc-------------cHHHHHHHHhCC
Confidence 5777777777443 248899999888
No 27
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=28.84 E-value=40 Score=31.98 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=43.6
Q ss_pred CCCChHHHHHHHH---HHHHHHHHcCCCCccC---ChH-HHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHH
Q 027895 142 HAASGRVIESAIQ---SALREAREKNITGNAE---TPF-LLARV-----NELTG--GLSLASNIALVKNNALIGAKISVA 207 (217)
Q Consensus 142 ~~~~~~~i~~~I~---~Al~eA~~~gi~Gk~~---TPf-lL~~i-----~e~T~--G~Sl~aNiaLl~nNa~laa~IA~~ 207 (217)
.+|+.++|+++|+ +|-+.|++.|..|=++ ++| ||..+ |+.|+ |-| ++|.+|+..+|-.+
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs-------~enR~r~~~ei~~a 216 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGS-------LENRMRLLRELLED 216 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSS-------HHHHTHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCC-------HHHHHHHHHHHHHH
Confidence 4688999999887 4556678889999998 788 87655 33443 334 45667777777766
Q ss_pred HHH
Q 027895 208 LAQ 210 (217)
Q Consensus 208 ~~~ 210 (217)
..+
T Consensus 217 vr~ 219 (690)
T 3k30_A 217 TLD 219 (690)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 28
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=28.68 E-value=40 Score=27.48 Aligned_cols=47 Identities=4% Similarity=0.036 Sum_probs=25.2
Q ss_pred cccCCCHHHHHHHHHHH-HhcCCCCeEEEEeC----CCcCCCCChHHHHHHHH
Q 027895 107 PCRVDSPEDCARLIDVN-MKLKLGSGLVIGVP----IPREHAASGRVIESAIQ 154 (217)
Q Consensus 107 ~~~~d~~~e~A~~~~~~-~~l~l~~g~lvanP----iP~e~~~~~~~i~~~I~ 154 (217)
..-+.+++++.+++..- +.++- =-+||.|. ...-..++.+.+++.++
T Consensus 60 ~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 60 KANVGQPAKIKEMFQQIDETFGR-LDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSC-CCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34566788887777542 33432 23455553 12223467777666554
No 29
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=28.64 E-value=65 Score=29.85 Aligned_cols=59 Identities=27% Similarity=0.362 Sum_probs=30.2
Q ss_pred CCHHHHHHHHhcCCCCccccccchHHH--HhcCCCchhhHHHHHHHHHH---CCCcEEEecccc
Q 027895 3 LSTEELERLAKLGSKAQKTARRDIAHV--VATRGNGATTVSATMFFASM---VGIPVFVTGGIG 61 (217)
Q Consensus 3 l~~~ele~la~~~~~~~K~SrRDl~~~--~a~~~~GaTTVaaTm~lA~~---aGI~VFaTGGiG 61 (217)
.+.++.+.+.+.+-+..+++-..=+.+ -.....|..+..+...++.. .+|||++.|||.
T Consensus 279 ~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~ 342 (490)
T 4avf_A 279 ATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIR 342 (490)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC
T ss_pred CcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCC
Confidence 455666666665445555531110000 00122344455555566653 378888888875
No 30
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=28.58 E-value=39 Score=27.49 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHhcCCCCccccccchHHHHhcCCCchhhHHHHHHHHHHCCCcEEEec
Q 027895 2 RLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTG 58 (217)
Q Consensus 2 Gl~~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTG 58 (217)
|-...-+.+|..-..+..|+++.=+... .........+.+...+|+..||+|.|.|
T Consensus 161 G~g~ssl~~L~~l~~d~iKiD~~~v~~~-~~~~~~~~~~~~i~~~a~~~g~~viaeG 216 (259)
T 3s83_A 161 GTGFSSLSYLTRLPFDTLKIDRYFVRTM-GNNAGSAKIVRSVVKLGQDLDLEVVAEG 216 (259)
T ss_dssp ---CHHHHHHHHSCCCEEEECHHHHHHT-TTCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCchhHHHHHhCCCCEEEECHHHHhhh-hcCchHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3344556777665557889987433322 2223344568888999999999999986
No 31
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.49 E-value=1.4e+02 Score=22.88 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=32.6
Q ss_pred cEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccccccccccccCCCHHHHHHHHH
Q 027895 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDCARLID 121 (217)
Q Consensus 53 ~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~A~~~~ 121 (217)
+|++|||-|++-+ -+..-|.+-+ ..|.+++-.+...-++..-+++. ...+.+++++.+.+.
T Consensus 6 ~ilItGatG~iG~------~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~ 66 (227)
T 3dhn_A 6 KIVLIGASGFVGS------ALLNEALNRG-FEVTAVVRHPEKIKIENEHLKVK-KADVSSLDEVCEVCK 66 (227)
T ss_dssp EEEEETCCHHHHH------HHHHHHHTTT-CEEEEECSCGGGCCCCCTTEEEE-CCCTTCHHHHHHHHT
T ss_pred EEEEEcCCchHHH------HHHHHHHHCC-CEEEEEEcCcccchhccCceEEE-EecCCCHHHHHHHhc
Confidence 6999999999844 2233333322 33444444443333333334443 345667888777663
No 32
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=28.18 E-value=90 Score=27.67 Aligned_cols=52 Identities=15% Similarity=0.182 Sum_probs=26.8
Q ss_pred HHHHHHHCCCcEEEecccccc-cCCcccccccccchhhhc--CCCeEEEecccccc
Q 027895 43 TMFFASMVGIPVFVTGGIGGV-HRHGEHTMDISSDLTELG--RTPVAVVSAGIKSI 95 (217)
Q Consensus 43 Tm~lA~~aGI~VFaTGGiGGV-Hrga~~t~DiSaDL~eL~--rtpV~VVcaG~KsI 95 (217)
.+..+..+|++.+..++-||- ..++..+++.-.++.+.- +.|| +.+.|..+-
T Consensus 238 ~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipv-ia~GGI~~~ 292 (370)
T 1gox_A 238 DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPV-FLDGGVRRG 292 (370)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCE-EEESSCCSH
T ss_pred HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEE-EEECCCCCH
Confidence 456667778777776555553 233333444444444422 4554 345666633
No 33
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=28.04 E-value=91 Score=27.83 Aligned_cols=57 Identities=26% Similarity=0.419 Sum_probs=32.4
Q ss_pred CCHHHHHHHHhcCCCCccccccc----hHHHHhcCCCchhhHHHHHHH---HHHCCCcEEEecccc
Q 027895 3 LSTEELERLAKLGSKAQKTARRD----IAHVVATRGNGATTVSATMFF---ASMVGIPVFVTGGIG 61 (217)
Q Consensus 3 l~~~ele~la~~~~~~~K~SrRD----l~~~~a~~~~GaTTVaaTm~l---A~~aGI~VFaTGGiG 61 (217)
.+.++.+.+.+.+-+..|++... -... ....|..+..+...+ ++..+|||++.|||.
T Consensus 154 ~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~--~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~ 217 (361)
T 3khj_A 154 VTEEATKELIENGADGIKVGIGPGSICTTRI--VAGVGVPQITAIEKCSSVASKFGIPIIADGGIR 217 (361)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCCTTCCHHH--HTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCC
T ss_pred CCHHHHHHHHHcCcCEEEEecCCCcCCCccc--ccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCC
Confidence 35677777776655667764210 0000 112344455555555 344699999999985
No 34
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=27.87 E-value=62 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.299 Sum_probs=21.2
Q ss_pred HHHHC-CCcEEEecccccccCCcccccccccchhhhcCC-CeEEEe
Q 027895 46 FASMV-GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT-PVAVVS 89 (217)
Q Consensus 46 lA~~a-GI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rt-pV~VVc 89 (217)
+.... +|||++||||.- .++.++-+. .+..|+
T Consensus 151 l~~~~~~ipvvaiGGI~~------------~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 151 LLGPYAQLQIMPTGGIGL------------HNIRDYLAIPNIVACG 184 (224)
T ss_dssp HHTTTTTCEEEEBSSCCT------------TTHHHHHTSTTBCCEE
T ss_pred HHhhCCCCeEEEECCcCH------------HHHHHHHhcCCCEEEE
Confidence 44445 799999998851 356677676 555555
No 35
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.79 E-value=52 Score=29.13 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=27.2
Q ss_pred CCHHHHHHHHhcCCCCccccccc-hHHHHhcCCCchhhHHHHHHHHHH-------CC---CcEEEecccc
Q 027895 3 LSTEELERLAKLGSKAQKTARRD-IAHVVATRGNGATTVSATMFFASM-------VG---IPVFVTGGIG 61 (217)
Q Consensus 3 l~~~ele~la~~~~~~~K~SrRD-l~~~~a~~~~GaTTVaaTm~lA~~-------aG---I~VFaTGGiG 61 (217)
+|.++.+++.+.+-+..++++-- -...+ ..+|-.|......++.. .| |+|+++|||-
T Consensus 220 ~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~--~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~ 287 (393)
T 2qr6_A 220 NDYTTALHMMRTGAVGIIVGGGENTNSLA--LGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIE 287 (393)
T ss_dssp CSHHHHHHHHTTTCSEEEESCCSCCHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC
T ss_pred CCHHHHHHHHHcCCCEEEECCCccccccc--CCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC
Confidence 45555555554433445554300 00000 11234455555545444 45 8888887764
No 36
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=27.42 E-value=1.3e+02 Score=26.06 Aligned_cols=98 Identities=12% Similarity=0.241 Sum_probs=47.6
Q ss_pred HCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEecccccccccccccccc-------------ccccCCCHHH
Q 027895 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL-------------VPCRVDSPED 115 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~L-------------~~~~~d~~~e 115 (217)
+.|=.|++|||-||+-+ -+..-|.+-+ ..|++++--...--++..+++-+ ...-+.++++
T Consensus 43 l~gk~vlVTGas~GIG~------aia~~La~~G-a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~ 115 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGK------AIALKAAKDG-ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ 115 (346)
T ss_dssp TTTCEEEEETTTSHHHH------HHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCChHHHH------HHHHHHHHCC-CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHH
Confidence 45777999999999844 2333333333 22444433222211111112111 2335667888
Q ss_pred HHHHHHHH-HhcCCCCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 027895 116 CARLIDVN-MKLKLGSGLVIGVP-I---PREHAASGRVIESAIQ 154 (217)
Q Consensus 116 ~A~~~~~~-~~l~l~~g~lvanP-i---P~e~~~~~~~i~~~I~ 154 (217)
+.+++..- .+++ +=-+||.|. + ..-...+.+.+++.++
T Consensus 116 v~~~~~~~~~~~g-~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 116 ISAAVEKAIKKFG-GIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHHHHS-CCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 87777532 3333 223455442 1 1112466777766554
No 37
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=27.37 E-value=81 Score=25.31 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=43.5
Q ss_pred cEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccccccc--cccccCCCHHHHHHHHHH-HHhcCCC
Q 027895 53 PVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEY--LVPCRVDSPEDCARLIDV-NMKLKLG 129 (217)
Q Consensus 53 ~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~--L~~~~~d~~~e~A~~~~~-~~~l~l~ 129 (217)
.|++|||-||+-+ -+..-|.+-+ ..|++++--....-++...++- ..+.-+.+++++.+++.. ..+++-
T Consensus 4 ~vlVTGas~gIG~------~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~- 75 (247)
T 3dii_A 4 GVIVTGGGHGIGK------QICLDFLEAG-DKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR- 75 (247)
T ss_dssp EEEEESTTSHHHH------HHHHHHHHTT-CEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC-
T ss_pred EEEEECCCCHHHH------HHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCC-
Confidence 5889999999854 2333333333 1233332211111111111111 134456678888877753 233432
Q ss_pred CeEEEEeC-C--Cc-CCCCChHHHHHHHH
Q 027895 130 SGLVIGVP-I--PR-EHAASGRVIESAIQ 154 (217)
Q Consensus 130 ~g~lvanP-i--P~-e~~~~~~~i~~~I~ 154 (217)
=-+||.|. + +. -..++.+..++.++
T Consensus 76 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp CCEEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 23455553 1 11 12456677666554
No 38
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=27.03 E-value=38 Score=28.19 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=46.6
Q ss_pred HHCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEecccccccc-------ccccccccccccCCCHHHHHHHH
Q 027895 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILD-------IPRTLEYLVPCRVDSPEDCARLI 120 (217)
Q Consensus 48 ~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILD-------i~~TlE~L~~~~~d~~~e~A~~~ 120 (217)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....-+ .+....+ ...-+.+++++.+++
T Consensus 5 ~l~gk~vlVTGas~GIG~------aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~ 76 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGR------AAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAA-LAGDVGDEALHEALV 76 (280)
T ss_dssp TTTTCEEEESSTTSHHHH------HHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEE-CCCCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHH------HHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEE-EECCCCCHHHHHHHH
Confidence 345667899999999844 23333333322 12222211111000 0111222 334566788887777
Q ss_pred HH-HHhcCCCCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 027895 121 DV-NMKLKLGSGLVIGVPI-----PREHAASGRVIESAIQ 154 (217)
Q Consensus 121 ~~-~~~l~l~~g~lvanPi-----P~e~~~~~~~i~~~I~ 154 (217)
.. ..+++- =-+||.|.= ..-..++.+.+++.++
T Consensus 77 ~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 77 ELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp HHHHHHHSC-CCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCC-CCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 53 233442 234555531 1122467777776654
No 39
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=26.96 E-value=90 Score=25.38 Aligned_cols=48 Identities=25% Similarity=0.308 Sum_probs=25.6
Q ss_pred CHHHHHHHHhcCCCCccccccchHHHHhcCCCchhhHHHHHHHHHHC-CCcEEEecccc
Q 027895 4 STEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMV-GIPVFVTGGIG 61 (217)
Q Consensus 4 ~~~ele~la~~~~~~~K~SrRDl~~~~a~~~~GaTTVaaTm~lA~~a-GI~VFaTGGiG 61 (217)
|.+|+.+-.+.+-+..|+ .+ ....||. ..--.+.... .|||++||||.
T Consensus 113 t~~e~~~A~~~Gad~v~~----fp----a~~~gG~--~~lk~l~~~~~~ipvvaiGGI~ 161 (207)
T 2yw3_A 113 TPTEVERALALGLSALKF----FP----AEPFQGV--RVLRAYAEVFPEVRFLPTGGIK 161 (207)
T ss_dssp SHHHHHHHHHTTCCEEEE----TT----TTTTTHH--HHHHHHHHHCTTCEEEEBSSCC
T ss_pred CHHHHHHHHHCCCCEEEE----ec----CccccCH--HHHHHHHhhCCCCcEEEeCCCC
Confidence 455655444444455566 22 1223342 2222344455 89999999985
No 40
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.57 E-value=1.3e+02 Score=24.53 Aligned_cols=97 Identities=14% Similarity=0.239 Sum_probs=47.4
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEecccccccccccccccc-------------ccccCCCHHHH
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYL-------------VPCRVDSPEDC 116 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~L-------------~~~~~d~~~e~ 116 (217)
.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....-++...++-+ .+.-+.+++++
T Consensus 5 ~~k~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 77 (274)
T 3e03_A 5 SGKTLFITGASRGIGL------AIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQV 77 (274)
T ss_dssp TTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHH
T ss_pred CCcEEEEECCCChHHH------HHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 3556899999999854 23434444332 3444433322221222122111 33456678888
Q ss_pred HHHHHHH-HhcCCCCeEEEEeCC---C-cCCCCChHHHHHHHH
Q 027895 117 ARLIDVN-MKLKLGSGLVIGVPI---P-REHAASGRVIESAIQ 154 (217)
Q Consensus 117 A~~~~~~-~~l~l~~g~lvanPi---P-~e~~~~~~~i~~~I~ 154 (217)
.+++..- ..++ +=-+||.|.= + .-...+.+.+++.++
T Consensus 78 ~~~~~~~~~~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 78 RAAVAATVDTFG-GIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHHS-CCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 7776532 3333 2234555531 1 112367777776543
No 41
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.50 E-value=1.3e+02 Score=23.92 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=24.0
Q ss_pred ccCCCHHHHHHHHHHH-HhcCCCCeEEEEeCC-Cc---CCCCChHHHHHHHH
Q 027895 108 CRVDSPEDCARLIDVN-MKLKLGSGLVIGVPI-PR---EHAASGRVIESAIQ 154 (217)
Q Consensus 108 ~~~d~~~e~A~~~~~~-~~l~l~~g~lvanPi-P~---e~~~~~~~i~~~I~ 154 (217)
..+.+++++.+++..- ..++ +=-+||.|.= .. -..++.+.+++.++
T Consensus 70 ~Dv~~~~~v~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 70 GNVGDWDSTKQAFDKVKAEVG-EIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHTC-CEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 4466777777776533 3333 2344555521 11 12366777666544
No 42
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=25.62 E-value=50 Score=29.58 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHCCCcEEEeccccccc-CCcccccccccchhhhcCCCeEEEecccccccccccccc
Q 027895 38 TTVSATMFFASMVGIPVFVTGGIGGVH-RHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLE 103 (217)
Q Consensus 38 TTVaaTm~lA~~aGI~VFaTGGiGGVH-rga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE 103 (217)
.|+ -....+..+|++.+..+|-||-- .++..+++.-.++.+--..|| +.+-|..+--|+.+-|.
T Consensus 234 ~t~-e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pV-ia~GGI~~~~dv~kal~ 298 (380)
T 1p4c_A 234 LSA-EDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPV-LIDSGFRRGSDIVKALA 298 (380)
T ss_dssp CCH-HHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCE-EECSSCCSHHHHHHHHH
T ss_pred CcH-HHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeE-EEECCCCCHHHHHHHHH
Confidence 444 35677778999988887777631 122334444444444334464 45677786666655443
No 43
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=25.40 E-value=72 Score=25.32 Aligned_cols=22 Identities=14% Similarity=0.012 Sum_probs=12.8
Q ss_pred HHHHHHHHHHCCCcEEEecccc
Q 027895 40 VSATMFFASMVGIPVFVTGGIG 61 (217)
Q Consensus 40 VaaTm~lA~~aGI~VFaTGGiG 61 (217)
....-.+....+|||++.|||.
T Consensus 164 ~~~~~~~~~~~~ipvia~GGI~ 185 (223)
T 1y0e_A 164 FQFLKDVLQSVDAKVIAEGNVI 185 (223)
T ss_dssp HHHHHHHHHHCCSEEEEESSCC
T ss_pred HHHHHHHHhhCCCCEEEecCCC
Confidence 3344445555567777777664
No 44
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=25.18 E-value=1e+02 Score=24.37 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=45.2
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-------cccccccccccCCCHHHHHHHHHH
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-------PRTLEYLVPCRVDSPEDCARLIDV 122 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-------~~TlE~L~~~~~d~~~e~A~~~~~ 122 (217)
.|=.+++|||-||+-+ .+..-|.+-+ ..|++++-.....-.+ +...++ .+..+.+++++.+++..
T Consensus 4 ~~k~vlITGas~gIG~------~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 4 NEKVALVTGASRGIGF------EVAHALASKG-ATVVGTATSQASAEKFENSMKEKGFKARG-LVLNISDIESIQNFFAE 75 (247)
T ss_dssp TTCEEEESSCSSHHHH------HHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCEEE-EECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEE-EEecCCCHHHHHHHHHH
Confidence 3456899999999844 2344444333 2233333222111111 111111 23456678888877764
Q ss_pred HHhcCCCCeEEEEeC-CCc---CCCCChHHHHHHHH
Q 027895 123 NMKLKLGSGLVIGVP-IPR---EHAASGRVIESAIQ 154 (217)
Q Consensus 123 ~~~l~l~~g~lvanP-iP~---e~~~~~~~i~~~I~ 154 (217)
-....-+=-+||-|. +.. -...+.+.+++.++
T Consensus 76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp HHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 333221223455553 211 12356676665544
No 45
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=24.87 E-value=78 Score=27.17 Aligned_cols=25 Identities=28% Similarity=0.360 Sum_probs=10.7
Q ss_pred chhhHHHHHHHHHHCC--CcEEEeccc
Q 027895 36 GATTVSATMFFASMVG--IPVFVTGGI 60 (217)
Q Consensus 36 GaTTVaaTm~lA~~aG--I~VFaTGGi 60 (217)
||+|+...-.+.+..| ++|-+.|||
T Consensus 183 ggAt~~dv~lmr~~vg~~v~VKasGGI 209 (239)
T 3ngj_A 183 HGATPEDVKLMKDTVGDKALVKAAGGI 209 (239)
T ss_dssp CCCCHHHHHHHHHHHGGGSEEEEESSC
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeCCC
Confidence 4455544333333322 444455443
No 46
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.74 E-value=2.1e+02 Score=21.15 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=31.8
Q ss_pred CcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-cccccccccccCCCHHHHHHHH
Q 027895 52 IPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-PRTLEYLVPCRVDSPEDCARLI 120 (217)
Q Consensus 52 I~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-~~TlE~L~~~~~d~~~e~A~~~ 120 (217)
-+|++|||-|++-+ -+..-|.+-+ ..|.+++-.+...-.. ...+++. ...+.+++++.+.+
T Consensus 4 ~~ilVtGatG~iG~------~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~ 65 (206)
T 1hdo_A 4 KKIAIFGATGQTGL------TTLAQAVQAG-YEVTVLVRDSSRLPSEGPRPAHVV-VGDVLQAADVDKTV 65 (206)
T ss_dssp CEEEEESTTSHHHH------HHHHHHHHTT-CEEEEEESCGGGSCSSSCCCSEEE-ESCTTSHHHHHHHH
T ss_pred CEEEEEcCCcHHHH------HHHHHHHHCC-CeEEEEEeChhhcccccCCceEEE-EecCCCHHHHHHHH
Confidence 47999999999844 2333343333 3455554433332221 2223332 33456777777665
No 47
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=24.63 E-value=46 Score=24.85 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=22.8
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHH
Q 027895 144 ASGRVIESAIQSALREAREKNITGNAETPFL 174 (217)
Q Consensus 144 ~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPfl 174 (217)
++...+...|++..+.+++.||+| ||.+
T Consensus 127 ~~s~~~~~~v~~~~~~a~~~gv~g---TPtf 154 (184)
T 4dvc_A 127 YNGFAVDSMVHRFDKQFQDSGLTG---VPAV 154 (184)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTCCS---SSEE
T ss_pred HhCHHHHHHHHHHHHHHHHcCCCc---CCEE
Confidence 455677788999999999999998 7744
No 48
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=24.19 E-value=93 Score=24.39 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=10.7
Q ss_pred cEEEecccccccC
Q 027895 53 PVFVTGGIGGVHR 65 (217)
Q Consensus 53 ~VFaTGGiGGVHr 65 (217)
.|++|||-||+-+
T Consensus 4 ~vlITGasggiG~ 16 (244)
T 2bd0_A 4 ILLITGAGKGIGR 16 (244)
T ss_dssp EEEEETTTSHHHH
T ss_pred EEEEECCCChHHH
Confidence 4899999999844
No 49
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=24.02 E-value=41 Score=29.90 Aligned_cols=66 Identities=24% Similarity=0.360 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHhcC-CCCccccccc---hHHHHhcCCCchhh--HH-HHHHHHHHCCCcEEEecccccccCCc
Q 027895 2 RLSTEELERLAKLG-SKAQKTARRD---IAHVVATRGNGATT--VS-ATMFFASMVGIPVFVTGGIGGVHRHG 67 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~SrRD---l~~~~a~~~~GaTT--Va-aTm~lA~~aGI~VFaTGGiGGVHrga 67 (217)
|+|.+|+.-|++.= +...++...| +-..+..+..|.-| || .+.+++..+|++|.-.|+=+=-|+++
T Consensus 52 get~eEi~g~~~am~~~~~~v~~~~~~~~vD~~gTGGdg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~G 124 (346)
T 4hkm_A 52 KETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSG 124 (346)
T ss_dssp CCCHHHHHHHHHHHHHHSCCCCCSCCTTEEEEECC------CCCHHHHHHHHHHHTTCEEEEEC---------
T ss_pred CcCHHHHHHHHHHHHHhCCCCCCCCCccceeecCCCCCCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcC
Confidence 78999999887631 1223343333 22234556666554 33 34567778999999999866556654
No 50
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=24.01 E-value=35 Score=31.84 Aligned_cols=89 Identities=19% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHhcC-CCCcccccc------chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCccc-----
Q 027895 2 RLSTEELERLAKLG-SKAQKTARR------DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEH----- 69 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~SrR------Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~----- 69 (217)
|+|.+||.-|++.= +...++... ++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|+++.-
T Consensus 50 Get~eEiag~~~Am~~~~~~~~~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnR~~ss~~GsaDvLEa 129 (440)
T 2tpt_A 50 DMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLES 129 (440)
T ss_dssp CCCHHHHHHHHHHHHHTSBCCCCTTTTCSSCBEEEEECCCSSCCHHHHHHHHHHHTTCBEEEEECCCCTTSCCHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCcccccCCCeeeeCCCCCCCccHHHHHHHHHHhCCCcEEEECCCCCCCcccHHHHHHh
Confidence 78999999887520 112222211 122233445566544444567888999999999998766776521
Q ss_pred --ccccccchhh----hcCCCeEEEec
Q 027895 70 --TMDISSDLTE----LGRTPVAVVSA 90 (217)
Q Consensus 70 --t~DiSaDL~e----L~rtpV~VVca 90 (217)
.+++..+..+ |.++.++++.+
T Consensus 130 L~Gv~~~ls~e~~~~~l~~~G~~fl~a 156 (440)
T 2tpt_A 130 IPGFDIFPDDNRFREIIKDVGVAIIGQ 156 (440)
T ss_dssp STTCCSCCCHHHHHHHHHHTSEEEEEC
T ss_pred CcCCCCCCCHHHHHHHHHHcCEEEEcC
Confidence 1222222222 45778888766
No 51
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=23.93 E-value=81 Score=25.94 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=21.1
Q ss_pred HHHHC-CCcEEEecccccccCCcccccccccchhhhcCC-CeEEEe
Q 027895 46 FASMV-GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRT-PVAVVS 89 (217)
Q Consensus 46 lA~~a-GI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rt-pV~VVc 89 (217)
+.... .|||++||||.- .++.++-+. .+..|+
T Consensus 150 i~~~~~~ipvvaiGGI~~------------~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 150 IAGPFSQVRFCPTGGISP------------ANYRDYLALKSVLCIG 183 (214)
T ss_dssp HHTTCTTCEEEEBSSCCT------------TTHHHHHTSTTBSCEE
T ss_pred HhhhCCCCeEEEECCCCH------------HHHHHHHhcCCCeEEE
Confidence 44445 899999998851 256666666 455555
No 52
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=23.87 E-value=1.2e+02 Score=24.64 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=45.5
Q ss_pred HCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEecccccccccccc--ccccccccCCCHHHHHHHHHHH-Hh
Q 027895 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRT--LEYLVPCRVDSPEDCARLIDVN-MK 125 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~T--lE~L~~~~~d~~~e~A~~~~~~-~~ 125 (217)
+.|=.+++|||-||+-+ -+..-|.+-+ ..|++++--.....+.-.. .++ ...-+.+++++.+++..- ..
T Consensus 25 l~~k~vlVTGas~gIG~------aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 25 LSSAPILITGASQRVGL------HCALRLLEHG-HRVIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKTQ 96 (260)
T ss_dssp --CCCEEESSTTSHHHH------HHHHHHHHTT-CCEEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHH------HHHHHHHHCC-CEEEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHHh
Confidence 45667999999999844 2333344433 2344443322211100000 111 344566788888777543 33
Q ss_pred cCCCCeEEEEeC---CCcCCCCChHHHHHHHH
Q 027895 126 LKLGSGLVIGVP---IPREHAASGRVIESAIQ 154 (217)
Q Consensus 126 l~l~~g~lvanP---iP~e~~~~~~~i~~~I~ 154 (217)
++ +=-+||.|. .+.....+.+.+++.++
T Consensus 97 ~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 97 TS-SLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CS-CCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred cC-CCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 44 223455442 12223345565555443
No 53
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=23.76 E-value=87 Score=25.99 Aligned_cols=97 Identities=15% Similarity=0.269 Sum_probs=46.0
Q ss_pred HCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccc--------cccccccccccccCCCHHHHHHHH
Q 027895 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSIL--------DIPRTLEYLVPCRVDSPEDCARLI 120 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsIL--------Di~~TlE~L~~~~~d~~~e~A~~~ 120 (217)
+.|=.+++|||-||+-+. +..-|.+-+- .|++++--...-+ ..+..+++ ...-+.+++++.+++
T Consensus 45 l~gk~vlVTGas~GIG~a------ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~ 116 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRA------VSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVL-LPGDLSDEQHCKDIV 116 (291)
T ss_dssp TTTCEEEEETTTSHHHHH------HHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEE-EESCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHH------HHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEE-EECCCCCHHHHHHHH
Confidence 456679999999998542 3333333221 2333322111000 01112222 334566788887776
Q ss_pred HH-HHhcCCCCeEEEEeC-C--C--cCCCCChHHHHHHHH
Q 027895 121 DV-NMKLKLGSGLVIGVP-I--P--REHAASGRVIESAIQ 154 (217)
Q Consensus 121 ~~-~~~l~l~~g~lvanP-i--P--~e~~~~~~~i~~~I~ 154 (217)
.. ..+++ +=-+||.|. + | .-..++.+.+++.++
T Consensus 117 ~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 117 QETVRQLG-SLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHHHHHHS-SCCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HHHHHHcC-CCCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 53 23343 223455551 1 1 122357777777665
No 54
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=23.57 E-value=2.6e+02 Score=23.41 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=24.9
Q ss_pred cEEEecccccccC---------Cc--ccccccccchhh----hcCCCeEEEeccccc
Q 027895 53 PVFVTGGIGGVHR---------HG--EHTMDISSDLTE----LGRTPVAVVSAGIKS 94 (217)
Q Consensus 53 ~VFaTGGiGGVHr---------ga--~~t~DiSaDL~e----L~rtpV~VVcaG~Ks 94 (217)
+|++|||-|.+-+ |. -...|.+.|-.. +.+..+++-|+|.-.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~ 58 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNR 58 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCC
Confidence 5888888887644 32 123455333333 335668888888654
No 55
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.41 E-value=78 Score=24.75 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=44.2
Q ss_pred CCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccc---cccccccccCCCHHHHHHHHHHH-Hhc
Q 027895 51 GIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPR---TLEYLVPCRVDSPEDCARLIDVN-MKL 126 (217)
Q Consensus 51 GI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~---TlE~L~~~~~d~~~e~A~~~~~~-~~l 126 (217)
+=.|++|||-||+-+ -+..-|.+-+ ..|++++-.....-++.. .+++ ....+.+++++.+++..- ..+
T Consensus 5 ~k~vlVtGasggiG~------~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 5 KGAVLITGASRGIGE------ATARLLHAKG-YRVGLMARDEKRLQALAAELEGALP-LPGDVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCEEEESSTTSHHHH------HHHHHHHHTT-CEEEEEESCHHHHHHHHHHSTTCEE-EECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHH------HHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhhceE-EEecCCCHHHHHHHHHHHHHHc
Confidence 335899999999844 2333443333 234444332221111111 1222 234566788877766532 233
Q ss_pred CCCCeEEEEeC-CC---cCCCCChHHHHHHHH
Q 027895 127 KLGSGLVIGVP-IP---REHAASGRVIESAIQ 154 (217)
Q Consensus 127 ~l~~g~lvanP-iP---~e~~~~~~~i~~~I~ 154 (217)
+-. -+||.|. +. .-...+.+.+++.++
T Consensus 77 ~~i-d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 77 GEL-SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp SCC-CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCC-CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 322 3344442 11 112356666665544
No 56
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=23.21 E-value=43 Score=29.50 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=40.8
Q ss_pred CCCChHHHHHHHHH---HHHHHHHcCCCCccCC---hHHHHHH-HHHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 027895 142 HAASGRVIESAIQS---ALREAREKNITGNAET---PFLLARV-NELTGGLSLASNIALVKNNALIGAKISVALAQ 210 (217)
Q Consensus 142 ~~~~~~~i~~~I~~---Al~eA~~~gi~Gk~~T---PflL~~i-~e~T~G~Sl~aNiaLl~nNa~laa~IA~~~~~ 210 (217)
.+++.++|+++|++ |-+.|++.|..|=+++ -||+..+ .-.|+-|+-+.-- .++|..++..+|-.+..+
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~ 214 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVRE 214 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHH
Confidence 46899999999884 5566778899887765 4666543 2222222211111 145667777777666543
No 57
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=23.08 E-value=53 Score=30.51 Aligned_cols=90 Identities=20% Similarity=0.205 Sum_probs=52.0
Q ss_pred CCCHHHHHHHHhcC-CCCcccccc----chHHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCcc-------c
Q 027895 2 RLSTEELERLAKLG-SKAQKTARR----DIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGE-------H 69 (217)
Q Consensus 2 Gl~~~ele~la~~~-~~~~K~SrR----Dl~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~-------~ 69 (217)
|+|.+||.-|++.= +...++... ++-..+..|..|..+--.+.+++..+|++|.=.||=|=-|.++. .
T Consensus 49 Get~eEiag~a~AM~~~~~~v~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaL~ 128 (433)
T 1brw_A 49 GMTEEETAALTMAMVQSGEMLDLSSIRGVKVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVP 128 (433)
T ss_dssp CCCHHHHHHHHHHHHHTSCCCCCTTSCSCCEEEEECCCSSCCHHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTST
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCceeeCCCCCCCcchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHCc
Confidence 78999999888520 112222221 12223344444444333456788899999999999776677763 1
Q ss_pred ccccccchhh----hcCCCeEEEecc
Q 027895 70 TMDISSDLTE----LGRTPVAVVSAG 91 (217)
Q Consensus 70 t~DiSaDL~e----L~rtpV~VVcaG 91 (217)
.++++.+..+ |.++.++++.+.
T Consensus 129 Gv~i~ls~e~~~~~l~~~Gi~fl~a~ 154 (433)
T 1brw_A 129 GFHVEISKDEFIRLVNENGIAIIGQT 154 (433)
T ss_dssp TCCCCCCHHHHHHHHHHHSEEEEECC
T ss_pred CceecCCHHHHHHHHHHcCeeEecCc
Confidence 2333333333 456778886553
No 58
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=23.07 E-value=61 Score=25.79 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=46.6
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-------cccccccccccCCCHHHHHHHHHH
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-------PRTLEYLVPCRVDSPEDCARLIDV 122 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-------~~TlE~L~~~~~d~~~e~A~~~~~ 122 (217)
.|=.|++|||-||+-+ .+..-|.+-+- .|++++--....-.+ +...++ .+.-+.+++++.+++..
T Consensus 8 ~~k~vlITGas~giG~------~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQ------AYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAIS-VAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEE-EECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHH------HHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEE-EEccCCCHHHHHHHHHH
Confidence 4556899999999844 34444444332 233333222111111 111222 33456678887777653
Q ss_pred -HHhcCCCCeEEEEeC-C----Cc--CCCCChHHHHHHHH
Q 027895 123 -NMKLKLGSGLVIGVP-I----PR--EHAASGRVIESAIQ 154 (217)
Q Consensus 123 -~~~l~l~~g~lvanP-i----P~--e~~~~~~~i~~~I~ 154 (217)
...++ +=-+||.|. + +. -..++.+.+++.++
T Consensus 80 ~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 80 TLAEFG-GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHHHHS-CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HHHHcC-CCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 23333 233466553 2 11 12467777766543
No 59
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=22.96 E-value=75 Score=25.69 Aligned_cols=17 Identities=29% Similarity=0.376 Sum_probs=12.8
Q ss_pred HCCCcEEEecccccccC
Q 027895 49 MVGIPVFVTGGIGGVHR 65 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHr 65 (217)
+.|=.+++|||-||+-+
T Consensus 5 l~~k~vlVTGas~gIG~ 21 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGL 21 (262)
T ss_dssp TTTCEEEEETTTSHHHH
T ss_pred cCCCEEEEeCCCcHHHH
Confidence 34556899999999844
No 60
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=22.94 E-value=2.6e+02 Score=21.46 Aligned_cols=94 Identities=11% Similarity=-0.005 Sum_probs=47.1
Q ss_pred HHHHHHHCCCcEEEecccccccCCcccccc----cccchhhhcC-CCeEEEeccccccccccccccccccccCCC-HHHH
Q 027895 43 TMFFASMVGIPVFVTGGIGGVHRHGEHTMD----ISSDLTELGR-TPVAVVSAGIKSILDIPRTLEYLVPCRVDS-PEDC 116 (217)
Q Consensus 43 Tm~lA~~aGI~VFaTGGiGGVHrga~~t~D----iSaDL~eL~r-tpV~VVcaG~KsILDi~~TlE~L~~~~~d~-~~e~ 116 (217)
.-.++...|..-+.--|++|- .+.| +-.-+.++.. ..+++|+-|.-++.. ..+++-......+. ...+
T Consensus 43 ~~~l~~~l~~~~v~N~g~~G~-----t~~~~~~~~~~~~~~~~~~pd~Vii~~G~ND~~~-~~~~~~~~~~~~~~f~~~l 116 (232)
T 3dc7_A 43 HDILAADWDVERSDNLGISGS-----TIGSRYDAMAVRYQAIPEDADFIAVFGGVNDYGR-DQPLGQYGDCDMTTFYGAL 116 (232)
T ss_dssp HHHHHHHHTCSCCEEEECTTC-----CSSTTSSCHHHHGGGSCTTCSEEEEECCHHHHHT-TCCCCCTTCCSTTSHHHHH
T ss_pred HHHHHHHhCCceeEEeeeCCc-----ccccChHHHHHHHHhcCCCCCEEEEEEecccccc-CcCCccccccchHHHHHHH
Confidence 445666667655667778863 2222 2223333543 349999999998765 33333221111111 1133
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCCcCC
Q 027895 117 ARLIDVNMKLKLGSGLVIGVPIPREH 142 (217)
Q Consensus 117 A~~~~~~~~l~l~~g~lvanPiP~e~ 142 (217)
.+++..-++..=..-+++..|+|...
T Consensus 117 ~~li~~l~~~~P~~~iil~~p~~~~~ 142 (232)
T 3dc7_A 117 MMLLTGLQTNWPTVPKLFISAIHIGS 142 (232)
T ss_dssp HHHHHHHHHHCTTSCEEEEECCCCCS
T ss_pred HHHHHHHHHhCCCCeEEEEeCcccCC
Confidence 33343322221134567777777543
No 61
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=22.87 E-value=2.3e+02 Score=22.65 Aligned_cols=91 Identities=9% Similarity=0.075 Sum_probs=43.8
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccccccccccccCCCHHHHHHHHHHHHh-cCC
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDCARLIDVNMK-LKL 128 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~A~~~~~~~~-l~l 128 (217)
.|=.|++|||-||+-+ -+..-|.+-+- .|++++--....-. .. ....+.+++++.+++..-.+ ++
T Consensus 21 m~k~vlITGas~gIG~------~la~~l~~~G~-~V~~~~r~~~~~~~--~~----~~~d~~d~~~v~~~~~~~~~~~g- 86 (251)
T 3orf_A 21 MSKNILVLGGSGALGA------EVVKFFKSKSW-NTISIDFRENPNAD--HS----FTIKDSGEEEIKSVIEKINSKSI- 86 (251)
T ss_dssp -CCEEEEETTTSHHHH------HHHHHHHHTTC-EEEEEESSCCTTSS--EE----EECSCSSHHHHHHHHHHHHTTTC-
T ss_pred cCCEEEEECCCCHHHH------HHHHHHHHCCC-EEEEEeCCcccccc--cc----eEEEeCCHHHHHHHHHHHHHHcC-
Confidence 3556899999999844 34444443332 24433322221110 01 22337788888887764333 33
Q ss_pred CCeEEEEeCC-----CcCCCCChHHHHHHHH
Q 027895 129 GSGLVIGVPI-----PREHAASGRVIESAIQ 154 (217)
Q Consensus 129 ~~g~lvanPi-----P~e~~~~~~~i~~~I~ 154 (217)
+=-+||.|.= |.-...+.+.+++.++
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMID 117 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHH
Confidence 2234555532 1122345566665443
No 62
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=22.45 E-value=19 Score=27.72 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=16.6
Q ss_pred EEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCCh
Q 027895 134 IGVPIPREHAASGRVIESAIQSALREAREKNITGNAETP 172 (217)
Q Consensus 134 vanPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TP 172 (217)
++.||-.|. ++.|+.+|-+|.+++. ..+.||.-||
T Consensus 63 I~hPIt~e~---Re~i~~aVl~aY~~~~-~k~~~~~~~~ 97 (105)
T 2i9z_A 63 IAHPINSDM---RQEIQDAVMKVYDETD-EVIPDKNATS 97 (105)
T ss_dssp CEEESSHHH---HHHHHHHHHHHHHTST-TCC-------
T ss_pred EEEECCHHH---HHHHHHHHHHHHHHHH-HhccccccCC
Confidence 455655542 5666666666665543 5788999988
No 63
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.44 E-value=1.2e+02 Score=24.62 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=46.8
Q ss_pred HCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-------cccccccccccCCCHHHHHHHHH
Q 027895 49 MVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-------PRTLEYLVPCRVDSPEDCARLID 121 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-------~~TlE~L~~~~~d~~~e~A~~~~ 121 (217)
+.|=.+++|||-||+-+. +..-|.+-+- .|++++--....-++ +...++ ...-+.+++++.+++.
T Consensus 9 l~~k~vlVTGas~gIG~a------ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~ 80 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTT------LARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALS-VGTDITDDAQVAHLVD 80 (264)
T ss_dssp TTTCEEEEESCCTTHHHH------HHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEE-EECCTTCHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHH------HHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEE-EEcCCCCHHHHHHHHH
Confidence 456679999999998542 3333333221 233332211111001 111111 3345668888888775
Q ss_pred H-HHhcCCCCeEEEEeC-C---CcC-CCCChHHHHHHHH
Q 027895 122 V-NMKLKLGSGLVIGVP-I---PRE-HAASGRVIESAIQ 154 (217)
Q Consensus 122 ~-~~~l~l~~g~lvanP-i---P~e-~~~~~~~i~~~I~ 154 (217)
. .+.++ +=-+||.|. + +.. ...+.+.+++.++
T Consensus 81 ~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 81 ETMKAYG-RVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp HHHHHTS-CCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcC-CCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 3 33344 234566654 2 111 2467777776554
No 64
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=22.09 E-value=2.4e+02 Score=20.85 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=27.8
Q ss_pred CChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCc
Q 027895 144 ASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGL 185 (217)
Q Consensus 144 ~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~ 185 (217)
++.+++.+++.+-+.+ .|..++|-.+.+|.+.++|.
T Consensus 185 l~~~e~~~~l~~~~~~------~~~~~~~~~~~~l~~~~~G~ 220 (250)
T 1njg_A 185 LDVEQIRHQLEHILNE------EHIAHEPRALQLLARAAEGS 220 (250)
T ss_dssp CCHHHHHHHHHHHHHH------TTCCBCHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHh------cCCCCCHHHHHHHHHHcCCC
Confidence 4567777777766543 35689999999999999993
No 65
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=22.03 E-value=75 Score=24.98 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=13.2
Q ss_pred HCCCcEEEecccccccC
Q 027895 49 MVGIPVFVTGGIGGVHR 65 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHr 65 (217)
+.|-.|++|||-||+-+
T Consensus 9 ~~~~~vlVtGasggiG~ 25 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGK 25 (255)
T ss_dssp CTTCEEEETTTTSHHHH
T ss_pred CCCCEEEEECCccHHHH
Confidence 45667999999999844
No 66
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=21.85 E-value=84 Score=25.40 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=45.1
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccc-------cccccccccccCCCHHHHHHHHHH
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDI-------PRTLEYLVPCRVDSPEDCARLIDV 122 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi-------~~TlE~L~~~~~d~~~e~A~~~~~ 122 (217)
.|=.+++|||-||+-+ -+..-|.+-+-. |++++--....-++ +..+.+ ...-+.+++++.+++..
T Consensus 11 ~~k~vlVTGas~gIG~------~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGR------AIAGTFAKAGAS-VVVTDLKSEGAEAVAAAIRQAGGKAIG-LECNVTDEQHREAVIKA 82 (256)
T ss_dssp TTCEEEECSCSSHHHH------HHHHHHHHHTCE-EEEEESSHHHHHHHHHHHHHTTCCEEE-EECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHH------HHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEE-EECCCCCHHHHHHHHHH
Confidence 4556899999999854 233333333322 33332211110000 111111 23456678887777653
Q ss_pred -HHhcCCCCeEEEEeC---CCcCCCCChHHHHHHHH
Q 027895 123 -NMKLKLGSGLVIGVP---IPREHAASGRVIESAIQ 154 (217)
Q Consensus 123 -~~~l~l~~g~lvanP---iP~e~~~~~~~i~~~I~ 154 (217)
.+.++ +=-+||.|. .|.....+.+.+++.++
T Consensus 83 ~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 83 ALDQFG-KITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHHHS-CCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHHHcC-CCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 23333 223455542 22223567777776543
No 67
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.80 E-value=1e+02 Score=24.68 Aligned_cols=15 Identities=33% Similarity=0.567 Sum_probs=11.4
Q ss_pred CCcEEEecccccccC
Q 027895 51 GIPVFVTGGIGGVHR 65 (217)
Q Consensus 51 GI~VFaTGGiGGVHr 65 (217)
|=.+++|||-||+-+
T Consensus 4 ~k~vlVTGas~giG~ 18 (255)
T 2q2v_A 4 GKTALVTGSTSGIGL 18 (255)
T ss_dssp TCEEEESSCSSHHHH
T ss_pred CCEEEEeCCCcHHHH
Confidence 446889999988844
No 68
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.67 E-value=1.1e+02 Score=24.14 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhC
Q 027895 128 LGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTG 183 (217)
Q Consensus 128 l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~ 183 (217)
+++|++|.+=.+....+.....-.-+.++++++.-.+++. .+|-.+++|.+.|+
T Consensus 3 ~~~~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~--~~~~~i~~i~~~~~ 56 (223)
T 1y0e_A 3 LPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRA--NTKEDILAIKETVD 56 (223)
T ss_dssp SCSEEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEE--ESHHHHHHHHHHCC
T ss_pred cCCCeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeecc--CCHHHHHHHHHhcC
Confidence 6788888876666656655443333444555554444443 36777888888764
No 69
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=21.31 E-value=93 Score=26.28 Aligned_cols=12 Identities=17% Similarity=0.539 Sum_probs=11.1
Q ss_pred cccccccccccc
Q 027895 94 SILDIPRTLEYL 105 (217)
Q Consensus 94 sILDi~~TlE~L 105 (217)
.|+|+.+|+++|
T Consensus 31 hIIdL~kT~~~L 42 (218)
T 3r8n_B 31 HIINLEKTVPMF 42 (218)
T ss_dssp CCBCTTTSGGGT
T ss_pred eEEcHHHHHHHH
Confidence 689999999999
No 70
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=21.28 E-value=1.8e+02 Score=23.63 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=45.3
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccccccccccccCCCHHHHHHHHHH-HHhcCC
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLVPCRVDSPEDCARLIDV-NMKLKL 128 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~TlE~L~~~~~d~~~e~A~~~~~-~~~l~l 128 (217)
.|=.|++|||-||+-+. +..-|.+-+ ..|++++-..+.... ..++ ...-+.+++++.+++.. ...++
T Consensus 13 ~~k~vlVTGas~GIG~a------ia~~l~~~G-~~V~~~~r~~~~~~~---~~~~-~~~Dv~~~~~v~~~~~~~~~~~g- 80 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLA------VVDALVRYG-AKVVSVSLDEKSDVN---VSDH-FKIDVTNEEEVKEAVEKTTKKYG- 80 (269)
T ss_dssp TTCEEEESSTTSHHHHH------HHHHHHHTT-CEEEEEESCC--CTT---SSEE-EECCTTCHHHHHHHHHHHHHHHS-
T ss_pred CCCEEEEeCCCCHHHHH------HHHHHHHCC-CEEEEEeCCchhccC---ceeE-EEecCCCHHHHHHHHHHHHHHcC-
Confidence 45568999999998542 333333332 124443332222211 2222 23456788888877753 23333
Q ss_pred CCeEEEEeC-C---CcCCCCChHHHHHHHH
Q 027895 129 GSGLVIGVP-I---PREHAASGRVIESAIQ 154 (217)
Q Consensus 129 ~~g~lvanP-i---P~e~~~~~~~i~~~I~ 154 (217)
+=-+||.|. + ..-...+.+.+++.++
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 81 RIDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 223455542 1 1112367777665544
No 71
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=21.17 E-value=28 Score=30.93 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=40.5
Q ss_pred CCCChHHHHHHHHH---HHHHHHHcCCCCccCCh---HHHHHH-----HHHhC--CccHHHHHHHHHHHHHHHHHHHHHH
Q 027895 142 HAASGRVIESAIQS---ALREAREKNITGNAETP---FLLARV-----NELTG--GLSLASNIALVKNNALIGAKISVAL 208 (217)
Q Consensus 142 ~~~~~~~i~~~I~~---Al~eA~~~gi~Gk~~TP---flL~~i-----~e~T~--G~Sl~aNiaLl~nNa~laa~IA~~~ 208 (217)
.+++.++|+++|++ |-+.|++.|..|=+++- |||..+ ++.|+ |-|+ +|..++..+|-.+.
T Consensus 131 ~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGsl-------enR~rf~~eiv~aV 203 (343)
T 3kru_A 131 RELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSI-------ENRARFLIEVIDEV 203 (343)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH-------HHHTHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccch-------HhHHHHHHHHHHHH
Confidence 46899999999874 55667788999988883 444433 33343 3354 45666666666655
Q ss_pred HH
Q 027895 209 AQ 210 (217)
Q Consensus 209 ~~ 210 (217)
.+
T Consensus 204 r~ 205 (343)
T 3kru_A 204 RK 205 (343)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 72
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=21.14 E-value=91 Score=25.63 Aligned_cols=46 Identities=9% Similarity=0.211 Sum_probs=24.0
Q ss_pred ccCCCHHHHHHHHHH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 027895 108 CRVDSPEDCARLIDV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 154 (217)
Q Consensus 108 ~~~d~~~e~A~~~~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 154 (217)
.-+.+++++.+++.. ...++ +=-+||.|.= ..-..++.+.+++.++
T Consensus 80 ~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 80 CDVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CCTTCHHHHHHHHHHHHHHHC-SCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 456678887776653 23343 2234555521 1112367777776544
No 73
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=21.14 E-value=1.2e+02 Score=25.05 Aligned_cols=98 Identities=15% Similarity=0.243 Sum_probs=47.7
Q ss_pred HHCCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccc-------cccccccccCCCHHHHHHHH
Q 027895 48 SMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPR-------TLEYLVPCRVDSPEDCARLI 120 (217)
Q Consensus 48 ~~aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~-------TlE~L~~~~~d~~~e~A~~~ 120 (217)
.+.|=.+++|||-||+-+ -+..-|.+-+- .|++++--....-.+.. ...+ ...-+.+++++.+++
T Consensus 29 ~l~gk~~lVTGas~GIG~------aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~v~~~~ 100 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGK------KVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALP-IRCDVTQPDQVRGML 100 (276)
T ss_dssp CCTTCEEEEESTTSHHHH------HHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEE-EECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHH------HHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEE-EEcCCCCHHHHHHHH
Confidence 456778999999999854 23434443332 24433322211111111 1111 234566788887777
Q ss_pred HH-HHhcCCCCeEEEEeCC----CcCCCCChHHHHHHHH
Q 027895 121 DV-NMKLKLGSGLVIGVPI----PREHAASGRVIESAIQ 154 (217)
Q Consensus 121 ~~-~~~l~l~~g~lvanPi----P~e~~~~~~~i~~~I~ 154 (217)
.. ..+++ +=-+||.|.= ..-...+.+.+++.++
T Consensus 101 ~~~~~~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 101 DQMTGELG-GIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHHHHHS-CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 53 23343 2233554421 1112467777775544
No 74
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=21.05 E-value=1.2e+02 Score=26.20 Aligned_cols=17 Identities=41% Similarity=0.757 Sum_probs=11.6
Q ss_pred HHHHHCCCcEEEecccc
Q 027895 45 FFASMVGIPVFVTGGIG 61 (217)
Q Consensus 45 ~lA~~aGI~VFaTGGiG 61 (217)
.+.....|||++.|||.
T Consensus 156 ~i~~~~~iPViaaGGI~ 172 (332)
T 2z6i_A 156 QVATAISIPVIAAGGIA 172 (332)
T ss_dssp HHHHHCSSCEEEESSCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 34445678888888776
No 75
>3pvh_A UPF0603 protein AT1G54780, chloroplastic; TAP domain, rossman fold, acid phosphatase, arabidopsis THAL thylakoid lumen, hydrolase; 1.60A {Arabidopsis thaliana} PDB: 3pw9_A 3ptj_A
Probab=21.00 E-value=1.4e+02 Score=23.12 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHHHhcC----CCCeEEEEeCCCcCCCCC
Q 027895 111 DSPEDCARLIDVNMKLK----LGSGLVIGVPIPREHAAS 145 (217)
Q Consensus 111 d~~~e~A~~~~~~~~l~----l~~g~lvanPiP~e~~~~ 145 (217)
.++++-|.-++.+|.+| ...|+||.+-.-.|.++.
T Consensus 60 ~~i~~~A~~l~~~wgiG~~~~~~nGvLllva~~de~~i~ 98 (153)
T 3pvh_A 60 ADAFEYADQVLEKWYPSIEEGNNKGIVVLITSQKEGAIT 98 (153)
T ss_dssp CCHHHHHHHHHHHHSCSHHHHTTEEEEEEETTTTEEEEE
T ss_pred CCHHHHHHHHHHHhCCCCcCCCCCEEEEEEEeCCeEEEe
Confidence 47999999899999875 557999999777777766
No 76
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.95 E-value=1.3e+02 Score=24.11 Aligned_cols=96 Identities=17% Similarity=0.295 Sum_probs=44.5
Q ss_pred CCCcEEEecccccccCCcccccccccchhhhcCCCeEEEeccccccccccccc-cccccccCCCHHHHHHHHHHH-HhcC
Q 027895 50 VGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTL-EYLVPCRVDSPEDCARLIDVN-MKLK 127 (217)
Q Consensus 50 aGI~VFaTGGiGGVHrga~~t~DiSaDL~eL~rtpV~VVcaG~KsILDi~~Tl-E~L~~~~~d~~~e~A~~~~~~-~~l~ 127 (217)
.|=.+++|||-||+-+. +..-|.+-+ ..|++++--... -++...+ ....+..+.+++++.+++..- ..++
T Consensus 5 ~~k~vlVTGas~gIG~~------ia~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRA------IAQAFAREG-ALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTCEEEEETTTSHHHHH------HHHHHHHTT-CEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHH------HHHHHHHCC-CEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 45568999999998442 333333333 223333322211 1111111 022344566788887776532 2333
Q ss_pred CCCeEEEEeC-C--Cc-CCCCChHHHHHHHH
Q 027895 128 LGSGLVIGVP-I--PR-EHAASGRVIESAIQ 154 (217)
Q Consensus 128 l~~g~lvanP-i--P~-e~~~~~~~i~~~I~ 154 (217)
- =-+||.|. + +. -...+.+.+++.++
T Consensus 77 ~-iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 77 R-VDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp C-CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred C-CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 23455442 1 11 12356666665443
No 77
>1ng6_A Hypothetical protein YQEY; structural genomics, domain GATB/YQEY, PFAM02637, DUF186, PSI, protein structure initiative; 1.40A {Bacillus subtilis} SCOP: a.182.1.1
Probab=20.92 E-value=77 Score=24.89 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=33.7
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCcc
Q 027895 143 AASGRVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLS 186 (217)
Q Consensus 143 ~~~~~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~S 186 (217)
.++.++++.+|++++++-.. .|...-=|+++.+-..++|+.
T Consensus 94 qlsd~el~~iV~evi~~~~~---~g~k~~G~vmG~vmk~~~GkA 134 (148)
T 1ng6_A 94 QLSEEELRTIVNETIAEVGA---SSKADMGKVMGAIMPKVKGKA 134 (148)
T ss_dssp CCCHHHHHHHHHHHHHHTTC---CSGGGHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHCcc---cCHHHHHHHHHHHHHHcCCCC
Confidence 56778999999999987543 566677899999999999984
No 78
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=20.78 E-value=2.8e+02 Score=20.98 Aligned_cols=48 Identities=10% Similarity=-0.159 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCccCChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHH
Q 027895 147 RVIESAIQSALREAREKNITGNAETPFLLARVNELTGGLSLASNIALVKNNALIGAKIS 205 (217)
Q Consensus 147 ~~i~~~I~~Al~eA~~~gi~Gk~~TPflL~~i~e~T~G~Sl~aNiaLl~nNa~laa~IA 205 (217)
++..+++...++ + .|..++|-.+..+.+.++| |+.-+++...-+...|
T Consensus 177 ~~~~~~l~~~~~---~---~~~~~~~~~~~~l~~~~~g-----~~r~l~~~l~~~~~~a 224 (242)
T 3bos_A 177 DEKLAALQRRAA---M---RGLQLPEDVGRFLLNRMAR-----DLRTLFDVLDRLDKAS 224 (242)
T ss_dssp GGHHHHHHHHHH---H---TTCCCCHHHHHHHHHHTTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---H---cCCCCCHHHHHHHHHHccC-----CHHHHHHHHHHHHHHH
Confidence 455556655543 2 3457999999999999987 6666666665554443
No 79
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=20.76 E-value=1.2e+02 Score=26.36 Aligned_cols=26 Identities=31% Similarity=0.390 Sum_probs=20.1
Q ss_pred CCCCeEEEEeCCCcCCCCChHHHHHHHHHHHHHHHHcCC
Q 027895 127 KLGSGLVIGVPIPREHAASGRVIESAIQSALREAREKNI 165 (217)
Q Consensus 127 ~l~~g~lvanPiP~e~~~~~~~i~~~I~~Al~eA~~~gi 165 (217)
.+|.-++|.+|..+ .+|+.||...||
T Consensus 157 ~~Pdll~V~Dp~~e-------------~~Ai~EA~~l~I 182 (256)
T 2vqe_B 157 RLPDAIFVVDPTKE-------------AIAVREARKLFI 182 (256)
T ss_dssp SCCSEEEESCTTTT-------------HHHHHHHHHTTC
T ss_pred cCCCEEEEeCCccc-------------hHHHHHHHHcCC
Confidence 57888888888533 358999999988
No 80
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=20.60 E-value=92 Score=25.43 Aligned_cols=17 Identities=41% Similarity=0.642 Sum_probs=12.6
Q ss_pred HCCCcEEEecccccccC
Q 027895 49 MVGIPVFVTGGIGGVHR 65 (217)
Q Consensus 49 ~aGI~VFaTGGiGGVHr 65 (217)
+.|=.|++|||-||+-+
T Consensus 26 ~~~k~vlITGasggIG~ 42 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGR 42 (286)
T ss_dssp GTTCEEEESSCSSHHHH
T ss_pred cCCCEEEEeCCCcHHHH
Confidence 34567899999998843
No 81
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=20.53 E-value=1.3e+02 Score=25.50 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=11.1
Q ss_pred chhhHHHHHH--HHHHCCCcEEEeccc
Q 027895 36 GATTVSATMF--FASMVGIPVFVTGGI 60 (217)
Q Consensus 36 GaTTVaaTm~--lA~~aGI~VFaTGGi 60 (217)
||.|+-..-. +.+..|++|-+.|||
T Consensus 175 ~gAt~~dv~l~~m~~~v~v~VKaaGGi 201 (234)
T 1n7k_A 175 GGDPVTVFRLASLAKPLGMGVKASGGI 201 (234)
T ss_dssp CCSHHHHHHHHHHHGGGTCEEEEESSC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 4444433333 334444555555543
No 82
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.50 E-value=1.9e+02 Score=22.31 Aligned_cols=15 Identities=33% Similarity=0.293 Sum_probs=11.5
Q ss_pred CCcEEEecccccccC
Q 027895 51 GIPVFVTGGIGGVHR 65 (217)
Q Consensus 51 GI~VFaTGGiGGVHr 65 (217)
+=.|++|||-||+-+
T Consensus 3 ~k~vlItGasggiG~ 17 (250)
T 1yo6_A 3 PGSVVVTGANRGIGL 17 (250)
T ss_dssp CSEEEESSCSSHHHH
T ss_pred CCEEEEecCCchHHH
Confidence 446899999999843
No 83
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=20.48 E-value=53 Score=30.97 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHhc-CCCCccccccch-----HHHHhcCCCchhhHHHHHHHHHHCCCcEEEecccccccCCccc------
Q 027895 2 RLSTEELERLAKL-GSKAQKTARRDI-----AHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEH------ 69 (217)
Q Consensus 2 Gl~~~ele~la~~-~~~~~K~SrRDl-----~~~~a~~~~GaTTVaaTm~lA~~aGI~VFaTGGiGGVHrga~~------ 69 (217)
|+|.+||.-|++. -+...++...++ -..+..+..|..+--.+.+++..+|++|.=.||=|=-|+++.-
T Consensus 76 GeT~eEiag~a~AMr~~~~~v~~~~~~~~~~vD~~gTGGdG~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GSaDvLEaL 155 (474)
T 1uou_A 76 GMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESI 155 (474)
T ss_dssp CCCHHHHHHHHHHHHTTSCCCCCCGGGGGGBEEEEESCCTTCCHHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHhCCcCCcccccCCCeeEeCCCCCCCceeHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhC
Confidence 7899999988852 012233322222 1223344444443334457888999999999998755665521
Q ss_pred -ccccccchhh----hcCCCeEEEecc
Q 027895 70 -TMDISSDLTE----LGRTPVAVVSAG 91 (217)
Q Consensus 70 -t~DiSaDL~e----L~rtpV~VVcaG 91 (217)
.+++.-+..+ |.++-++++.+.
T Consensus 156 pGv~i~ls~e~~~~~l~~~Gi~fl~a~ 182 (474)
T 1uou_A 156 PGFNVIQSPEQMQVLLDQAGCCIVGQS 182 (474)
T ss_dssp TTCCCCCCHHHHHHHHHHHSEEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHcCeEEecCc
Confidence 1122222222 456778887663
No 84
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=20.42 E-value=1.5e+02 Score=27.48 Aligned_cols=56 Identities=29% Similarity=0.389 Sum_probs=29.6
Q ss_pred CHHHHHHHHhcCCCCccccccc----hHHHHhcCCCchhhHHHHHHHHH---HCCCcEEEecccc
Q 027895 4 STEELERLAKLGSKAQKTARRD----IAHVVATRGNGATTVSATMFFAS---MVGIPVFVTGGIG 61 (217)
Q Consensus 4 ~~~ele~la~~~~~~~K~SrRD----l~~~~a~~~~GaTTVaaTm~lA~---~aGI~VFaTGGiG 61 (217)
+.++.+.+.+.+-+..+++--. .... ....|..+..+...++. ..+|||++.|||.
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~--~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~ 344 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRI--VTGVGVPQITAIADAAGVANEYGIPVIADGGIR 344 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHH--HHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCccccc--ccCCCccHHHHHHHHHHHhccCCCeEEEeCCCC
Confidence 4555566655544555543100 0000 11234445555566665 3489999999886
No 85
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=20.32 E-value=82 Score=26.22 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=11.8
Q ss_pred HHHHC-CCcEEEecccc
Q 027895 46 FASMV-GIPVFVTGGIG 61 (217)
Q Consensus 46 lA~~a-GI~VFaTGGiG 61 (217)
+.... .||+++||||.
T Consensus 160 i~~~~~~ipvvaiGGI~ 176 (225)
T 1mxs_A 160 FGGPFGDIRFCPTGGVN 176 (225)
T ss_dssp HHTTTTTCEEEEBSSCC
T ss_pred HHhhCCCCeEEEECCCC
Confidence 33344 79999999884
No 86
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=20.25 E-value=2.4e+02 Score=25.99 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEeCC-----------CcCCC-CChHHHHHHHHHHHHHHHHcCCCCc
Q 027895 114 EDCARLIDVNMKLKLGSGLVIGVPI-----------PREHA-ASGRVIESAIQSALREAREKNITGN 168 (217)
Q Consensus 114 ~e~A~~~~~~~~l~l~~g~lvanPi-----------P~e~~-~~~~~i~~~I~~Al~eA~~~gi~Gk 168 (217)
+-+-.++.--.+.|-..+-+.++|+ |++.. .+.+.+..|-...|++|++.||-.+
T Consensus 130 eill~Yl~y~k~~Gf~~~hiWAcPP~~GDDYIF~~HP~~Qk~p~~~rL~~WY~~mL~kg~~~giv~~ 196 (380)
T 3biy_A 130 EILIGYLEYVKKLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHD 196 (380)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCCCTTCCSSSSSCCTTCCCCCHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHhCCCceEEEEccCCCCCCceEEeeCccccCCCCcHHHHHHHHHHHHHHHHcCeeee
Confidence 4556677777788999999999998 44434 6788899999999999999999543
No 87
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=20.16 E-value=2e+02 Score=28.15 Aligned_cols=78 Identities=13% Similarity=0.084 Sum_probs=52.4
Q ss_pred hcCCC-eEEEeccccccccccccccc--c---ccccCCCHHHHHHHHHHHHhcCCCCeEEE-EeCC-------------C
Q 027895 80 LGRTP-VAVVSAGIKSILDIPRTLEY--L---VPCRVDSPEDCARLIDVNMKLKLGSGLVI-GVPI-------------P 139 (217)
Q Consensus 80 L~rtp-V~VVcaG~KsILDi~~TlE~--L---~~~~~d~~~e~A~~~~~~~~l~l~~g~lv-anPi-------------P 139 (217)
.+-.| -.++|.|.|+-=+|..-+++ + .-..+|+.+|+.++.....+++..-.+.| .||- +
T Consensus 161 aG~~p~~iIv~nG~K~~eeI~~Al~~~~~G~~v~ivVDS~~ELe~L~~~A~~~g~~~~V~LRVnp~~~~~~~~i~TG~~~ 240 (666)
T 3nzq_A 161 HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK 240 (666)
T ss_dssp HHTTSCCEEEECSCCCHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHTTCCCCEEEEBCCSSSCSSTTCSSSSSC
T ss_pred cCCCCCcEEEEcCCCCHHHHHHHHHhhccCCCEEEEECCHHHHHHHHHHHHHcCCCceEEEEEEecCCCCcCccccCCCC
Confidence 34345 68899999987666666653 1 23469999999998887777776555555 4553 2
Q ss_pred cCCCCChHHHHHHHHHHH
Q 027895 140 REHAASGRVIESAIQSAL 157 (217)
Q Consensus 140 ~e~~~~~~~i~~~I~~Al 157 (217)
..+-++.+++.++++.+.
T Consensus 241 SKFGi~~~e~~~ll~~l~ 258 (666)
T 3nzq_A 241 SKFGLAATQVLQLVETLR 258 (666)
T ss_dssp CCSCBCHHHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHHH
Confidence 456688887777665543
No 88
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=20.01 E-value=1e+02 Score=28.43 Aligned_cols=26 Identities=31% Similarity=0.351 Sum_probs=17.0
Q ss_pred chhhHHHHHHHHHHC---------CCcEEEecccc
Q 027895 36 GATTVSATMFFASMV---------GIPVFVTGGIG 61 (217)
Q Consensus 36 GaTTVaaTm~lA~~a---------GI~VFaTGGiG 61 (217)
|-.|+.+...++..+ +|+|++.|||-
T Consensus 328 g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~ 362 (503)
T 1me8_A 328 GRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIV 362 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCC
T ss_pred CCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC
Confidence 334555555555443 89999999775
Done!