BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027897
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q75HV0|CCP31_ORYSJ Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1
Length = 236
Score = 226 bits (577), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 143/198 (72%), Gaps = 4/198 (2%)
Query: 1 MGTLALDTESVGTDIYRMLGL--KDLGKGTVGSPKILSLIGRLLEKSVQKNEMLLDTIKT 58
MGT D + Y LGL K PK+L L+ L++SVQKNE LLD+ K
Sbjct: 3 MGTFTTDESDKHEESYLSLGLTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKI 62
Query: 59 KDV-TIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHR 117
KD TIFHG RAP +SI+ Y +RIFKY CSPSCFV+A IYM+R+LQ+ ++TSL+VHR
Sbjct: 63 KDSSTIFHGHRAPDLSIKLYAERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHR 122
Query: 118 LLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFC 177
LLITSV+VAAKF DDAFFNNA+YARVGG+ST EMNR+E+ LF+LDFRL+V++ETF +C
Sbjct: 123 LLITSVVVAAKFTDDAFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYC 182
Query: 178 SQLGKEAAEGLQIDRPIQ 195
QL KE L IDRPIQ
Sbjct: 183 LQLEKETM-VLVIDRPIQ 199
>sp|Q8LB60|CCU31_ARATH Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2
Length = 221
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 150/223 (67%), Gaps = 8/223 (3%)
Query: 1 MGTLALDTESVGTDIYRMLGLKDLGKGTVGSPKILSLIGRLLEKSVQKN---EMLLDTIK 57
M +LA D + +D+Y LGL GK P +LS + LE+S+ N ++LL +
Sbjct: 1 MDSLATDPAFIDSDVYLRLGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPD 60
Query: 58 TKDVTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHR 117
+ VT+F G P ISI Y+DRIFKY CSPSCFVIAHIY+D FL KT L LNVHR
Sbjct: 61 S--VTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHR 118
Query: 118 LLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFC 177
L+IT+VM+AAK DD +FNNAYYARVGGV+T E+NR+E++ LF+LDF+LQV+ +TFH C
Sbjct: 119 LIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHC 178
Query: 178 SQLGKEAAEGLQIDRPI-QACKI-KENWSSK-GDAACVPTIAR 217
QL K+ +G QI+ PI +AC+ KE W + D+ C T AR
Sbjct: 179 CQLEKQNRDGFQIEWPIKEACRANKETWQKRTPDSLCSQTTAR 221
>sp|O80513|CCU41_ARATH Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1
Length = 202
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
Query: 21 LKDLGKGTVGSPKILSLIGRLLEKSVQKNEMLLDT-IKTKDVTIFHGLRAPTISIQQYID 79
+ +L +V S K+++ + LLE+ + N++ +++ V++FHGL PTI+IQ Y++
Sbjct: 1 MAELENPSVMS-KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLE 59
Query: 80 RIFKYGACSPSCFVIAHIYMDRFLQKTDG-HLTSLNVHRLLITSVMVAAKFIDDAFFNNA 138
RIFKY CSPSCFV+A++Y+DRF + + S NVHRLLITSVMVAAKF+DD ++NNA
Sbjct: 60 RIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNA 119
Query: 139 YYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKE 183
YYA+VGG+ST EMN +E+ FLF L F L V TF+ + S L KE
Sbjct: 120 YYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164
>sp|Q9LJ45|CCU11_ARATH Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1
Length = 210
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 8/174 (4%)
Query: 30 GSPKILSLIGRLLEKSVQKNEMLLDTIKT--KDVTIFHGLRAPTISIQQYIDRIFKYGAC 87
+P++L++I ++EK V +NE L K K + FHG+RAP+ISI +Y++RI+KY C
Sbjct: 23 ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82
Query: 88 SPSCFVIAHIYMDRFLQKTDGHLT-SLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGV 146
SP+CFV+ ++Y+DR K G L SLNVHRLL+T VM+AAK +DD +NN +YARVGGV
Sbjct: 83 SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142
Query: 147 STAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKE-----AAEGLQIDRPIQ 195
S A++N+ME++ LF LDFR+ V+ F +C L KE A L+ +P+Q
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQ 196
>sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1
Length = 216
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Query: 32 PKILSLIGRLLEKSVQKNEMLLDTIKT-KDVTIFHGLRAPTISIQQYIDRIFKYGACSPS 90
P +++ + LL++ + N+ L + K ++ F+ + P+ISI+ Y++RIFKY CS S
Sbjct: 21 PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80
Query: 91 CFVIAHIYMDRFLQKTDG-HLTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTA 149
C+++A+IY+DRF+QK + S NVHRL+ITSV+V+AKF+DD +NNA+YA+VGG++T
Sbjct: 81 CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140
Query: 150 EMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKE 183
EMN +E+ FLF + F+L V + T++ +CS L +E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174
>sp|Q7XC35|CCP41_ORYSJ Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1
Length = 212
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 14/196 (7%)
Query: 25 GKGTVGSPKILSLIGRLLEKSVQKNEMLLDTIKTKDV----TIFHGLRAPTISIQQYIDR 80
G+ P++++++ LL++ ++N+ + + F GL P ISI Y++R
Sbjct: 4 GEVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLER 63
Query: 81 IFKYGACSPSCFVIAHIYMDRFLQKTDG-HLTSLNVHRLLITSVMVAAKFIDDAFFNNAY 139
IF++ CSPSC+V+A+IY+DRFL++ + S NVHRLLITSV+ A KF+DD +NNAY
Sbjct: 64 IFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAY 123
Query: 140 YARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAA---EGLQIDRP-IQ 195
+ARVGG+S EMN +EV FLF + F L V F +C+ L E + +D P +
Sbjct: 124 FARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLPRLH 183
Query: 196 ACKIKENWSSKGDAAC 211
C S + DA C
Sbjct: 184 CCP-----SDQDDAGC 194
>sp|Q9FKF6|CCU43_ARATH Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1
Length = 219
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
Query: 32 PKILSLIGRLLEKSVQKNEMLLDTIKTKDVTIFHGLRAPTISIQQYIDRIFKYGACSPSC 91
P +L+ + LL++ + N+ L K F G+ P+ISI+ Y++RIF+Y CS SC
Sbjct: 23 PSVLTAMSYLLQRVSETNDNLSQKQKPSS---FTGVTKPSISIRSYLERIFEYANCSYSC 79
Query: 92 FVIAHIYMDRFLQKTDG-HLTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAE 150
+++A+IY+DRF++K + S NVHRL+ITSV+V+AKF+DD +NN YYA+VGG+S E
Sbjct: 80 YIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISREE 139
Query: 151 MNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAA 185
MN +E+ FLF + F L V V TF+ +C L +E A
Sbjct: 140 MNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMA 174
>sp|Q9SHD3|CCU21_ARATH Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1
Length = 222
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 128/205 (62%), Gaps = 14/205 (6%)
Query: 1 MGTLALDTESVGTDIYRMLGLKDLGKGTVGSPKILSLIGRLLEKSVQKNEMLLDTI---- 56
M +LA+ + +D+Y D TV P ++S++ L+E+++ +NE + +
Sbjct: 1 MDSLAISPRKLRSDLYSYSYQDD--SNTV--PLVISVLSSLIERTLARNERISRSYGGFG 56
Query: 57 KTKDVTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSL-NV 115
KT+ +F P ++IQ Y++RIF+Y PS +V+A++Y+DRF Q G SL NV
Sbjct: 57 KTR---VFDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNV 113
Query: 116 HRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHK 175
HRLLIT++M+A+K+++D + N+Y+A+VGG+ T ++N +E++FLF + F+L VNV F
Sbjct: 114 HRLLITTIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFES 173
Query: 176 FCSQLGKEAA--EGLQIDRPIQACK 198
+C L +E + G QI++ ++ +
Sbjct: 174 YCCHLEREVSIGGGYQIEKALRCAE 198
>sp|Q9M205|CCU22_ARATH Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1
Length = 230
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 113/176 (64%), Gaps = 8/176 (4%)
Query: 31 SPKILSLIGRLLEKSVQKNE-----MLLDTIKTKDVTIFHGLRAPTISIQQYIDRIFKYG 85
+P ++S++ L+++++ +NE L + IF P ++IQ Y+ RIF+Y
Sbjct: 29 TPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLGRIFRYT 88
Query: 86 ACSPSCFVIAHIYMDRFLQKTDGHLTSL-NVHRLLITSVMVAAKFIDDAFFNNAYYARVG 144
PS +V+A++Y+DRF Q G SL NVHRLLIT++M+A+K+++D + N+Y+A+VG
Sbjct: 89 KAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSYFAKVG 148
Query: 145 GVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAA--EGLQIDRPIQACK 198
G+ T ++N++E++FLF + F+L VNV F +C L +E + G QI++ ++ +
Sbjct: 149 GLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREVSFGGGYQIEKALRCAE 204
>sp|Q7FAT5|CCP21_ORYSJ Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1
Length = 217
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Query: 11 VGTDIYRMLGLKDLGKGTVGSPKILSLIGRLLEKSVQKNE----MLLDTIKTKDVTIFHG 66
+ +D+Y L D G + +P ++S++ LLE+ + +NE D + F
Sbjct: 6 LASDVY-ALPCGDDGTTALSTPVVVSVLASLLERHIARNERDQAAAADGEAARRARAFDS 64
Query: 67 LRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDG-HLTSLNVHRLLITSVMV 125
+S+ +++R +Y SP +V+A+ Y+DR L++ DG + S N RLL T+++V
Sbjct: 65 GTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDR-LRRGDGVRVVSANAQRLLTTAILV 123
Query: 126 AAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAA 185
A+KF++D + N+Y+A VGG++ AE++ +E+ FLF + FRL V+V F +C L +E +
Sbjct: 124 ASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREVS 183
Query: 186 E--GLQIDRPIQ 195
G Q++R ++
Sbjct: 184 YGGGYQVERCLK 195
>sp|Q0J9W0|CCP11_ORYSJ Cyclin-P1-1 OS=Oryza sativa subsp. japonica GN=CYCP1-1 PE=3 SV=2
Length = 264
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 12/170 (7%)
Query: 27 GTVGSPKILSLIGRLLEKSVQKNEML-----------LDTIKTKDVTIFHGLRAPTISIQ 75
+ P L ++ R +++ V +N+ + G AP I +
Sbjct: 18 ASAPPPPELDMVARAVQRLVARNDAVEALSGGGEAAAGLGAGMAAFEAARGAPAPRIGVA 77
Query: 76 QYIDRIFKYGACSPSCFVIAHIYMDRFL-QKTDGHLTSLNVHRLLITSVMVAAKFIDDAF 134
QY++R+ +Y P C+V+A+ Y+D ++ + S NVHRLL+ ++VA+K +DD
Sbjct: 78 QYLERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACLLVASKVLDDFH 137
Query: 135 FNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEA 184
NNA++ARVGGVS AEMNR+E++ L LDF + ++ + + L KEA
Sbjct: 138 HNNAFFARVGGVSNAEMNRLELELLAVLDFEVMLSHRVYELYREHLEKEA 187
>sp|P40186|PCL7_YEAST PHO85 cyclin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL7 PE=1 SV=3
Length = 285
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 29/203 (14%)
Query: 3 TLALDTESVGTDIYRMLGLKDLGKGTVGSPKILSLIGRLLEKSVQKNEMLLD-----TIK 57
T +LD E+ ++L + D + +++ +I LL + + N+ D + +
Sbjct: 84 THSLDEETNEQTDVKILNIADFP-----TDELILMISALLNRIITANDETTDVSQQVSDE 138
Query: 58 TKD-----VTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGH--- 109
T+D + F+G P I++ QY++RI KY + F+ +Y DR + K GH
Sbjct: 139 TEDELLTPILAFYGKNVPEIAVVQYLERIQKYCPTTNDIFLSLLVYFDR-ISKNYGHSSE 197
Query: 110 ----------LTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFL 159
+ S N+HRLLIT V + KF+ D F++N+ YA+VGG+S E+N +E++FL
Sbjct: 198 RNGCAKQLFVMDSGNIHRLLITGVTICTKFLSDFFYSNSRYAKVGGISLQELNHLELQFL 257
Query: 160 FSLDFRLQVNVETFHKFCSQLGK 182
DF+L V+VE K+ + L K
Sbjct: 258 ILCDFKLLVSVEEMQKYANLLYK 280
>sp|Q06712|PREG_NEUCR Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=preg PE=1 SV=1
Length = 483
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 37 LIGRLLEKSVQKNEMLLDTIKTK-DVTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIA 95
LI +L + ++ N+ + + ++T FH P IS+ Y+ R+ K+ SP +
Sbjct: 278 LIAHMLGELIELNDEAAQKVGQRHNLTRFHSRTTPGISVLDYLHRLAKHAYLSPPILLSM 337
Query: 96 HIYMDRFLQ-KTDGHLTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRM 154
Y+DR +D + +L VHR LIT+ VAAK + D+F N YARVGGV AE+N +
Sbjct: 338 VYYIDRLCALYSDFTINTLTVHRFLITAATVAAKGLSDSFLTNTLYARVGGVRVAELNML 397
Query: 155 EVKFLFSLDFRL 166
E++FL +D+++
Sbjct: 398 ELEFLHRVDWKI 409
>sp|O42979|YGZA_SCHPO PHO85 cyclin-like protein C20F10.10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC20F10.10 PE=3 SV=1
Length = 243
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 63 IFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLT----SLNVHRL 118
IF P+ISIQ Y+ RI KY + F+ IY+DR + H T S N+HR
Sbjct: 71 IFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHH--FHFTVFINSFNIHRF 128
Query: 119 LITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
LI A+KF D F+ N+ YA+VGG+ E+N +E+ F DF L +++E +
Sbjct: 129 LIAGFTAASKFFSDVFYTNSRYAKVGGIPLHELNHLELSFFVFNDFNLFISLEDLQAY 186
>sp|P20052|PHO80_YEAST PHO85 cyclin PHO80 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=PHO80 PE=1 SV=3
Length = 293
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 34 ILSLIGRLLEKSVQKNEMLLDTIKTKD---VTIFHGLRAPTISIQQYIDRIFKYGACSPS 90
++ LI R+L + NE T K+ D +T +H P ISI Y R+ K+ +
Sbjct: 35 LVVLISRMLVSLIAINENSA-TKKSDDQITLTRYHSKIPPNISIFNYFIRLTKFSSLE-H 92
Query: 91 CFVIAHIYMDRFLQKT--DGHLTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVST 148
C ++ +Y LQ D L SL HR L+T+ VA K + D+F NA+YA+VGGV
Sbjct: 93 CVLMTSLYYIDLLQTVYPDFTLNSLTAHRFLLTATTVATKGLCDSFSTNAHYAKVGGVRC 152
Query: 149 AEMNRMEVKFLFSLDFRL 166
E+N +E FL +++R+
Sbjct: 153 HELNILENDFLKRVNYRI 170
>sp|P40038|PCL6_YEAST PHO85 cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL6 PE=1 SV=1
Length = 420
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 110 LTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVN 169
+ S N+HRL+I + V+ KF+ D F++N+ Y+RVGG+S E+N +E++FL DF L ++
Sbjct: 332 MDSHNIHRLIIAGITVSTKFLSDFFYSNSRYSRVGGISLQELNHLELQFLVLCDFELLIS 391
Query: 170 VETFHKFCSQL 180
V ++ L
Sbjct: 392 VNELQRYADLL 402
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 64 FHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQK 105
F G P I + QY RI KY + F+ +Y DR ++
Sbjct: 223 FRGKHVPQIGLDQYFQRIQKYCPTTNDVFLSLLVYFDRISKR 264
>sp|Q8K158|CNPD1_MOUSE Protein CNPPD1 OS=Mus musculus GN=Cnppd1 PE=2 SV=1
Length = 407
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEG 138
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A GGV+ A +N +E FL ++D+RL + + S L AE
Sbjct: 139 EEEEVFNDEWGA-AGGVAVATLNALERSFLSAMDWRLYTDPREIFEVLSWLESCVAE 194
>sp|P34624|YOJ1_CAEEL Uncharacterized cyclin-like protein ZK353.1 OS=Caenorhabditis
elegans GN=ZK353.1 PE=1 SV=3
Length = 357
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 73 SIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD 132
+I +++ +F + C +I +Y++R L + L N R+++ S+M+A+K DD
Sbjct: 190 NIYRFVRNLFSSAQLTAECAIITLVYIERLLNYAEMDLCPSNWRRVVLGSIMLASKVWDD 249
Query: 133 -AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEA-AEGLQI 190
A +N Y + + +MN +E +FL LDF ++V + K+ L A A LQ+
Sbjct: 250 QAVWNVDYCQILRDTNVDDMNELERRFLECLDFNIEVPSSVYAKYYFDLRTLALANDLQL 309
Query: 191 DRPIQA 196
PIQ
Sbjct: 310 --PIQP 313
>sp|Q6P7B2|CNPD1_RAT Protein CNPPD1 OS=Rattus norvegicus GN=Cnppd1 PE=2 SV=1
Length = 408
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEG 138
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A GGV+ +N +E FL ++D+RL + + S L AE
Sbjct: 139 EEEEVFNDEWGA-AGGVAVPTLNALERSFLSAMDWRLYTDPREIFEVLSWLESCVAE 194
>sp|Q5E9J2|CNPD1_BOVIN Protein CNPPD1 OS=Bos taurus GN=CNPPD1 PE=2 SV=1
Length = 411
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEG 138
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A GGV+ +N +E FL ++D+RL + + S L AE
Sbjct: 139 EEEEVFNDEWGA-AGGVAVPTLNALERGFLSAMDWRLYTDPREIFEVLSWLEGCVAE 194
>sp|Q5ZJH7|CNPD1_CHICK Protein CNPPD1 OS=Gallus gallus GN=CNPPD1 PE=2 SV=1
Length = 439
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 77 KKYVSHVSREACISPCSMMLALVYIERLRHRNPEYLQQISSSDLFLISMMVASKYLYDEG 136
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A G V MN +E+ FL ++D+ L + + S L AE
Sbjct: 137 EEEEVFNDEWGA-AGKVDVQTMNTLEMNFLSAIDWSLYTDPRELFEVLSWLEGRVAE 192
>sp|Q9BV87|CNPD1_HUMAN Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2
Length = 410
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEG 138
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A GGV+ +N +E FL ++D+ L + + S L AE
Sbjct: 139 EEEEVFNDEWGA-AGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAE 194
>sp|Q5R4U5|CNPD1_PONAB Protein CNPPD1 OS=Pongo abelii GN=CNPPD1 PE=2 SV=1
Length = 410
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 75 QQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFI---- 130
++Y+ + + SP ++A +Y++R + +L ++ L + S+MVA+K++
Sbjct: 79 KKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEG 138
Query: 131 -DDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
++ FN+ + A GGV+ +N +E FL ++D+ L + + S L AE
Sbjct: 139 EEEEVFNDEWGA-AGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAE 194
>sp|P53124|PCL10_YEAST PHO85 cyclin-10 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL10 PE=1 SV=1
Length = 433
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 56 IKTKDVTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGH------ 109
++ K+ + F+ PT+S ++ RI P+ +++A +D DG+
Sbjct: 292 VEKKEYSNFYMKSKPTLSSADFLKRIQDKCEYQPTVYLVATFLIDTLFLTRDGNNILQLK 351
Query: 110 --LTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFL 159
L VHR++I +V ++ K ++D ++ Y+++V G+S + ++EV L
Sbjct: 352 LNLQEKEVHRMIIAAVRLSTKLLEDFVHSHEYFSKVCGISKRLLTKLEVSLL 403
>sp|Q8BGU5|CCNY_MOUSE Cyclin-Y OS=Mus musculus GN=Ccny PE=1 SV=1
Length = 341
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQ 230
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAEGLQIDR 192
A +N Y + ++ +MN +E +FL L F + V + K+ L + AE +
Sbjct: 231 AVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDL-RSLAEANNLSF 289
Query: 193 PIQA 196
P++
Sbjct: 290 PLEP 293
>sp|Q8N7R7|CCYL1_HUMAN Cyclin-Y-like protein 1 OS=Homo sapiens GN=CCNYL1 PE=1 SV=2
Length = 359
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 191 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPTNWKRIVLGAILLASKVWDDQ 250
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y + ++ +MN ME FL L F + V + K+
Sbjct: 251 AVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY 294
>sp|Q08CI4|CCYL1_DANRE Cyclin-Y-like protein 1 OS=Danio rerio GN=ccnyl1 PE=2 SV=1
Length = 339
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAELDICPSNWKRIVLGAILLASKVWDDQ 228
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y + ++ +MN ME FL L F + V + K+
Sbjct: 229 AVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY 272
>sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2
Length = 341
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQ 230
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAEGLQIDR 192
A +N Y + ++ +MN +E +FL L F + V + K+ L + AE +
Sbjct: 231 AVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDL-RSLAEANNLSF 289
Query: 193 PIQA 196
P++
Sbjct: 290 PLEP 293
>sp|Q28EL0|CCYL1_XENTR Cyclin-Y-like protein 1 OS=Xenopus tropicalis GN=ccnyl1 PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 173 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKRIVLGAILLASKVWDDQ 232
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y + ++ +MN ME FL L F + V + K+
Sbjct: 233 AVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY 276
>sp|Q6NRF4|CCY1B_XENLA Cyclin-Y-like protein 1-B OS=Xenopus laevis GN=ccnyl1-b PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N R+++ ++++A+K DD
Sbjct: 173 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKRIVLGAILLASKVWDDQ 232
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y + ++ +MN ME FL L F + V + K+
Sbjct: 233 AVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKY 276
>sp|Q5U5D0|CCY1A_XENLA Cyclin-Y-like protein 1-A OS=Xenopus laevis GN=ccnyl1-a PE=2 SV=1
Length = 339
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +F + C ++ +Y++R L + + N ++++ ++++++K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKQIVLGAILLSSKVWDDQ 228
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y + ++ +MN ME FL L F + V + K+
Sbjct: 229 AVWNVDYCQIMKDITVEDMNEMERHFLELLQFNINVTASVYAKY 272
>sp|P24867|PCL1_YEAST PHO85 cyclin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL1 PE=1 SV=1
Length = 279
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 65 HGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMD---RFLQKTDGHLTSLNVHRLLIT 121
H R P S+ +I R+ +Y + A Y++ R L + L S +HR+ +
Sbjct: 48 HLTRLP--SLMTFITRLVRYTNVYTPTLLTAACYLNKLKRILPRDATGLPS-TIHRIFLA 104
Query: 122 SVMVAAKFIDDAFFNNAYYARV--GGVSTAEMNRMEVKFLFSLDFRLQVNVE 171
++++AKF +D+ N ++AR G + ++N ME + L L++ L+VN E
Sbjct: 105 CLILSAKFHNDSSPLNKHWARYTDGLFTLEDINLMERQLLQLLNWDLRVNTE 156
>sp|Q08966|PCL8_YEAST PHO85 cyclin-8 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL8 PE=1 SV=1
Length = 492
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 68 RAPTISIQQYIDRIFK---YGACS--PSCFVIAHIYMDRFLQKTDG------HLTSLNVH 116
P++S + +IDRI +GA + +++ +++ R + DG L H
Sbjct: 360 NPPSLSFRDFIDRIQNKCMFGAVVYLGATYLLQLVFLTR--DEMDGPIKLKAKLQEDQAH 417
Query: 117 RLLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDF 164
R++I+++ +A K ++D + Y +V G+S + ++E+ F+ S++F
Sbjct: 418 RIIISTIRIATKLLEDFVHSQNYICKVFGISKRLLTKLEISFMASVNF 465
>sp|P87049|CGP1_SCHPO G1/S-specific cyclin pas1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=pas1 PE=2 SV=3
Length = 411
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 71 TISIQQYIDRIFKYGACSPSCFVIAHIYMDRFL----QKTDGHLTSLNVHRLLITSVMVA 126
++S+ Q++ + + ++A Y RF K ++ L RL + +M A
Sbjct: 35 SLSLTQFLYETIRRSRVDYTTLLLALYYFIRFRDAASSKPTNYIPLLCGRRLFLVCLMAA 94
Query: 127 AKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKFCSQLGKEAAE 186
KF+ D F+N ++R+ G+ ++ +E F +D+RL V F ++ +G+ A
Sbjct: 95 TKFLQDRSFSNRAWSRLSGLPVDKLLVLEYMFYQCIDYRLVVPKHIFARWSLLVGECCAH 154
Query: 187 G 187
Sbjct: 155 A 155
>sp|Q4R871|CCYL2_MACFA Cyclin-Y-like protein 2 OS=Macaca fascicularis GN=CCNYL2 PE=2 SV=1
Length = 360
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +FK + +++ IY++R + D + N R+++ ++++A+K D
Sbjct: 192 IFRFVRTLFKAIRLTAEFAIVSLIYIERLVSYADIDICPTNWKRIVLGAILLASKVWSDM 251
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y ++ EMN +E +FL +++ + V + +F
Sbjct: 252 AVWNEDYCKLFENITVEEMNELERQFLKLINYNIGVTGSVYSRF 295
>sp|Q5T2Q4|CCYL2_HUMAN Cyclin-Y-like protein 2 OS=Homo sapiens GN=CCNYL2 PE=2 SV=2
Length = 361
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 74 IQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDD- 132
I +++ +FK + +++ IY++R + D + N R+++ ++++A+K D
Sbjct: 193 IFRFVRTLFKAMRLTAEFAIVSLIYIERLVSYADIDICPTNWKRIVLGAILLASKVWSDM 252
Query: 133 AFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
A +N Y ++ EMN +E +FL +++ + + +F
Sbjct: 253 AVWNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNSVYSRF 296
>sp|O14336|MUG80_SCHPO Meiotically up-regulated gene 80 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug80 PE=1 SV=1
Length = 461
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 118 LLITSVMVAAKFIDDAFFNNAYYARVGGVSTAEMNRMEVKFLFSLDFRL 166
LL T++++A KF+DD F N +++V G TA +N E +L S+ + L
Sbjct: 336 LLTTALILANKFLDDNTFTNQSWSQVTGFRTALLNSFEQDWLASMSWNL 384
>sp|P30283|CGS5_YEAST S-phase entry cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB5 PE=1 SV=1
Length = 435
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 31 SPKILSLIGRLLEKSVQKNEMLLDTIKTKDVTIFHGLRAPTISIQQYIDRIFKYGACSPS 90
S +I + + R +++ + LLD KT + +R TI + ++ K+ C P
Sbjct: 163 SAEIFAFLYRRELETLPSHNYLLD--KTSKYYLRPSMR--TILVDWLVEVHEKF-QCYPE 217
Query: 91 CFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAKFIDDAFFNNAYYARV--GGVST 148
++ MDRFL K + L + L +TS+ +AAKF + A YA + G S
Sbjct: 218 TLFLSINLMDRFLAKNKVTMNKLQL--LAVTSLFIAAKFEEVNLPKLAEYAYITDGAASK 275
Query: 149 AEMNRMEVKFLFSLDFRL 166
++ E+ L SL+F +
Sbjct: 276 NDIKNAEMFMLTSLEFNI 293
>sp|P25693|PCL2_YEAST PHO85 cyclin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL2 PE=1 SV=2
Length = 308
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 56 IKTKDVTIFHGLRAPTISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNV 115
IK K + P + ++I+R+ K+ + +Y+ + ++ +
Sbjct: 31 IKIKKTNSMIDIALPAPPLTKFINRLIKHSNVQTPTLMATSVYLAKLRSIIPSNVYGIET 90
Query: 116 --HRLLITSVMVAAKFIDDAFFNNAYYARV--GGVSTAEMNRMEVKFLFSLDFRLQVNVE 171
HR+ + +++AAK ++D+ N ++A G + E+N +E + L D+ + ++ +
Sbjct: 91 TRHRIFLGCLILAAKTLNDSSPLNKHWAEYTDGLLILREVNTIERELLEYFDWDVTISTD 150
Query: 172 TFHKFCSQLGKEAAEGLQIDRPIQACKIKENWSSK 206
S K E Q+ + + C+ +N+S++
Sbjct: 151 DLITCLSPFLKPIKEE-QLYKSQRDCRTLKNFSAQ 184
>sp|A1AT86|PRMA_PELPD Ribosomal protein L11 methyltransferase OS=Pelobacter propionicus
(strain DSM 2379) GN=prmA PE=3 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 156 VKFLFSLDFRLQVNVETFHKFCSQLGKEAAEGLQIDRPIQACKIKENWSSKGDAACVP 213
VK FS D + +E F +L E GL I RPI + E+WSS A P
Sbjct: 55 VKAYFSEDEDVDARLEEIQNFLDRLA-EQHPGLSIPRPIISTVQSEDWSSSWKANFKP 111
>sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo sapiens GN=CCNYL3 PE=2
SV=1
Length = 344
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 81 IFKYGACSPSCFVIAHIYMDRFLQKTDGHLTSLNVHRLLITSVMVAAK-FIDDAFFNNAY 139
+F+ + C ++A +Y+ R L + L N ++++ ++++A+K + + ++
Sbjct: 83 LFQVIKLTAPCAIVALVYIKRLLTSANIDLCPTNWKKIVLGTMLLASKVWRNHGLWSVDD 142
Query: 140 YARVGGVSTAEMNRMEVKFLFSLDFRLQVNVETFHKF 176
+ M++ME FL L+F + V+ + K+
Sbjct: 143 SQNSKDTAVENMSKMEKCFLELLEFNIHVSASVYAKY 179
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 72 ISIQQYIDRIFKYGACSPSCFVIAHIYMDRFLQKTDGHLTS--LNVHRLLITSVMVAAKF 129
I+ +I ++ Y + P C +A Y+DRFL + +T+ + +LLI + + A
Sbjct: 105 IAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAK 164
Query: 130 IDDAFFNNAYYARVGG---VSTAE-MNRMEVKFLFSLDFRLQV 168
+++ +V V AE ++RME+ L +L +R+Q
Sbjct: 165 MEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQA 207
>sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=MAK5 PE=3 SV=1
Length = 754
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 24 LGKGTVGSPKILSLIGRLLEKSVQKNEMLLDTIKTKDVTIFHGLRAPTISI-QQYIDRIF 82
+GK T GS K L+ +LE+ + + E +TIK IF APT + Q +D +
Sbjct: 225 IGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPTAMIF----APTRELAHQVVDHMN 280
Query: 83 KYGACSP 89
K SP
Sbjct: 281 KIAKFSP 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,533,629
Number of Sequences: 539616
Number of extensions: 2669866
Number of successful extensions: 7754
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7689
Number of HSP's gapped (non-prelim): 49
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)