BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027898
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like
OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2
Length = 206
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 27/209 (12%)
Query: 2 IQLLYTVIFSQMALIMTLLFKT----P----LRKLVIMSLDRVKRGRGP-VVVKTVGGTL 52
++ L T++F + L++ ++F T P LRK V LD++ G+ + +K + +
Sbjct: 1 MEFLMTLVF--LVLLVEIVFCTFFMLPVSMHLRKNVYNKLDKLFGGQNAKIFLKVLALLV 58
Query: 53 FIVLMSSVYSILKIQQR--TLE-TGAL--NPTDQILMSKHMLEASLMGFLLFLSLMMDRL 107
IV S+ + I ++ T E TGA + M ++ + + GF L+L ++ R
Sbjct: 59 IIVFCDSIVNSYNINKKLHTPELTGAKFDRQNEYTRMFRYQRNSYICGFCLYLFFLIYRS 118
Query: 108 HHYIRELRLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKD 167
I +L + + A +KQT+ +N++ + L + LKT+IK L+ +
Sbjct: 119 QGIISQLSNVEASKTAIEKQTK-------NNLNTVETLLSENEKLKTEIKDLKK----ME 167
Query: 168 KEANAAKAEAEALKKQSEGFLLEYDRLLA 196
KE A K++AE K+ EY++LL
Sbjct: 168 KEHKAMKSQAENTTKEYLKLQEEYNQLLG 196
>sp|A4IFI1|CC157_BOVIN Coiled-coil domain-containing protein 157 OS=Bos taurus GN=CCDC157
PE=2 SV=2
Length = 688
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 105 DRLHHYIREL-RLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESEC 163
DRL + EL + L++ A ++Q + E + ER+ L + + LKTK+ LE E
Sbjct: 305 DRLRMQVGELEQALQEEQAARQRQAQEAEQHRAQWERERQQLLAETSDLKTKVATLEGEL 364
Query: 164 EMKDKEANAAKAEAEALKKQSEGFLLEYDRLLADNQHLRNQLE 206
+ + + A +++A+ L+ ++E LE +R + QHL Q+E
Sbjct: 365 KQQRESTQAVESKAQQLQAEAE-HRLEAERQV---QHLEQQVE 403
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 OS=Mus musculus GN=Bcap31
PE=1 SV=4
Length = 245
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 120 AMEAAKK--------QTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEAN 171
A EAAKK + + EDG ++ + ++ +LK ++KL+ E K+
Sbjct: 143 ASEAAKKYMEENDQLKKGAAEDGDKLDIGNTEMKLEENKSLKNDLRKLKDELASTKKKLE 202
Query: 172 AAKAEAEALKKQSEGFLLEYDRLLADNQHLR 202
A+ EA A++KQSEG EYDRLL ++ L+
Sbjct: 203 KAENEALAMQKQSEGLTKEYDRLLEEHAKLQ 233
>sp|Q170J7|MOEH_AEDAE Moesin/ezrin/radixin homolog 1 OS=Aedes aegypti GN=Moe PE=3 SV=1
Length = 583
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 103 MMDRLHHYIRELRLLRKAMEAAKKQ----TRSFEDGKNDNVDERKGLGDDIATLKTKIKK 158
M+ RL +++L+ + +EA + + + E+ KN V ER+ L D+I + +++K
Sbjct: 370 MIRRLEDQLKQLQFAKDELEARQNELQVMIKRLEESKNMEVAERQKLEDEIRAKQEEVQK 429
Query: 159 LESECEMKDKEANAAKAEA-EALKKQSE 185
++ E +KD E + E EA +KQ+E
Sbjct: 430 IQEEVSVKDTETKRLQEEVEEARRKQNE 457
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29
PE=1 SV=1
Length = 240
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 28/133 (21%)
Query: 95 GFLLFLSLMMDRLHHYIRELR-------LLRKAMEAAKKQTRSF--EDGK------NDNV 139
GF LF L++ RL I +L +L+ E K + F E+ K NDN
Sbjct: 108 GFSLFFWLVLRRLVTLITQLAKEIANKGVLKIQAENTNKAAKKFMEENEKLKLGLRNDNA 167
Query: 140 DE------RKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEALKKQSEGFLLEYDR 193
+E K L + LKT++KK S+ +K A+ + +K QSE EYDR
Sbjct: 168 EEHLLEAENKKLIESKENLKTELKK-ASDALLK------AQNDVMTMKIQSERLSKEYDR 220
Query: 194 LLADNQHLRNQLE 206
LL ++ L+N+LE
Sbjct: 221 LLKEHSELQNRLE 233
>sp|Q554P0|BZPJ_DICDI Probable basic-leucine zipper transcription factor J
OS=Dictyostelium discoideum GN=bzpJ PE=3 SV=1
Length = 787
Score = 35.4 bits (80), Expect = 0.28, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 66 IQQRTLETGALNPTDQILMSK-HMLEASLMGFLLFLSLMMDRLHHYIRELRLLRKAMEAA 124
+++R + ++ + Q+++S+ H+L+ S ++S + ++HH +L +A E
Sbjct: 498 VKKRGRDEDQIDTSGQVVLSREHVLKLSSKEIEEYVSRL--KMHH------ILTQAEEKE 549
Query: 125 KKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEALKKQ 183
K+ R + R + ++TK++K +C + N+ K E +ALKKQ
Sbjct: 550 LKKQRRLVKNREYASQSRSRRKIYVENIETKLQKTNQDCASIKSQLNSVKEENKALKKQ 608
>sp|Q5R8H3|BAP31_PONAB B-cell receptor-associated protein 31 OS=Pongo abelii GN=BCAP31
PE=2 SV=3
Length = 246
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 120 AMEAAKK---------QTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
A EAAKK + + + GK D + L ++ +LK ++KL+ E ++
Sbjct: 143 ASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKL 202
Query: 171 NAAKAEAEALKKQSEGFLLEYDRLLADNQHLRNQLESIDHSDSKKD 216
A+ + A++KQSEG EYDRLL ++ L+ ++D KK+
Sbjct: 203 EKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ---AAVDGPTDKKE 245
>sp|C1DKY8|SYS_AZOVD Serine--tRNA ligase OS=Azotobacter vinelandii (strain DJ / ATCC
BAA-1303) GN=serS PE=3 SV=1
Length = 426
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%)
Query: 118 RKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEA 177
RKA++ +Q ++ + ++ + + K G+DIA L ++ ++ S+ E +E +A +AE
Sbjct: 37 RKAVQTRTEQLQAERNARSKTIGQAKSRGEDIAPLLAEVDRMGSDLEAGKRELDAIQAEL 96
Query: 178 EAL 180
+AL
Sbjct: 97 DAL 99
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 OS=Homo sapiens GN=BCAP31
PE=1 SV=3
Length = 246
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 120 AMEAAKK---------QTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
A EAAKK + + + GK D + L ++ +LK ++KL+ E ++
Sbjct: 143 ASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKL 202
Query: 171 NAAKAEAEALKKQSEGFLLEYDRLLADNQHLR 202
A+ + A++KQSEG EYDRLL ++ L+
Sbjct: 203 EKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ 234
>sp|Q54G14|Y0266_DICDI Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum
GN=DDB_G0290685 PE=2 SV=2
Length = 1081
Score = 34.3 bits (77), Expect = 0.67, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 109 HYIRELRLLRKAMEAAKKQTRSFEDGKNDNVDERK---GLGDDIATLKTKIKKLESECEM 165
H I E R+ E +K+T+ D N +RK GL ++ T +K +++ E
Sbjct: 17 HAIEENNKNREIQEKRQKETKDRNDRMVQNQKDRKEMIGLTNEKQTYSNSVKNAKTDNEK 76
Query: 166 K--DKEANAAKAEAEALKKQSEGFLLEYDRLLADNQHLRNQLE 206
K + + ++K+ G + EY RL+ +N++L ++
Sbjct: 77 KIFQNLLDKTNSRITDIEKRQSGDISEYKRLVEENKNLEKNVK 119
>sp|P18850|ATF6A_HUMAN Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Homo
sapiens GN=ATF6 PE=1 SV=3
Length = 670
Score = 33.9 bits (76), Expect = 0.86, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 143 KGLGDDIATLKTK---IKKLESECEMKDKEA----------NAAKAEAEALKKQSEGFLL 189
+ +G DIA L+ + IK ES C+ + K+ AA +E E LKK++
Sbjct: 298 RNVGSDIAVLRRQQRMIKNRESACQSRKKKKEYMLGLEARLKAALSENEQLKKENGTLKR 357
Query: 190 EYDRLLADNQHLR 202
+ D ++++NQ L+
Sbjct: 358 QLDEVVSENQRLK 370
>sp|P39083|RGA1_YEAST Rho-type GTPase-activating protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RGA1 PE=1 SV=1
Length = 1007
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 149 IATLKTKIKKLESECEMKDKEANAAKAEAEALKKQSEGFLLEYDRLLADNQHLRN 203
+ LK +K+LES+ E KE K+ EAL++ E + E ++L D+ L N
Sbjct: 612 LKQLKINLKELESQREELMKEITEMKSMKEALRRHIESYNSEKNKLYLDSNELSN 666
>sp|Q88FT2|SYS_PSEPK Serine--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=serS
PE=3 SV=1
Length = 426
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 111 IRELRLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
I L RKA++ +Q ++ + ++ ++ + K G+DIA L ++++ +E
Sbjct: 30 IESLEERRKAVQTRTEQLQAERNARSKSIGQAKAKGEDIAPLMADVERMANEL------- 82
Query: 171 NAAKAEAEALKKQSEGFLL 189
A KAE +A++ + +G LL
Sbjct: 83 AAGKAELDAIQAELDGILL 101
>sp|A8AII9|SYS_CITK8 Serine--tRNA ligase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=serS PE=3 SV=1
Length = 430
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 111 IRELRLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
+R L RK ++ + ++ + ++ ++ + K G+DI L+ ++ KL +E
Sbjct: 30 LRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKL-------GEEL 82
Query: 171 NAAKAEAEALKKQSEGFLLEYDRLLADN 198
+AAKAE E+L+ + L L AD+
Sbjct: 83 DAAKAELESLQAEIRDIALTIPNLPADD 110
>sp|A9MHZ1|SYS_SALAR Serine--tRNA ligase OS=Salmonella arizonae (strain ATCC BAA-731 /
CDC346-86 / RSK2980) GN=serS PE=3 SV=1
Length = 430
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 111 IRELRLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
+R L RK ++ + ++ + ++ ++ + K G+DI L+ ++ KL +E
Sbjct: 30 LRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRREVNKL-------GEEL 82
Query: 171 NAAKAEAEALKKQSEGFLLEYDRLLAD 197
+AAKAE EAL + L L AD
Sbjct: 83 DAAKAELEALLAEIRDIALTIPNLPAD 109
>sp|Q8CP76|EBH_STAES Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ebh PE=4 SV=1
Length = 9439
Score = 31.2 bits (69), Expect = 6.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 152 LKTKIKKLESECEMKDKEANAAKAEAEALKKQSEGFLLEYDRLLADNQHL-RNQLESIDH 210
+K KIK ++S E+ + AKAE E LKKQ+ + + + + D + + R E ID
Sbjct: 9002 VKQKIKDIDSNNELTSTQREDAKAEIERLKKQAID-KVNHSKSIKDIETVKRTDFEEIDQ 9060
Query: 211 SDSKK 215
D K+
Sbjct: 9061 FDPKR 9065
>sp|Q5HPA2|EBH_STAEQ Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ebh PE=4 SV=2
Length = 9439
Score = 31.2 bits (69), Expect = 6.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 152 LKTKIKKLESECEMKDKEANAAKAEAEALKKQSEGFLLEYDRLLADNQHL-RNQLESIDH 210
+K KIK ++S E+ + AKAE E LKKQ+ + + + + D + + R E ID
Sbjct: 9002 VKQKIKDIDSNNELTSTQREDAKAEIERLKKQAID-KVNHSKSIKDIETVKRTDFEEIDQ 9060
Query: 211 SDSKK 215
D K+
Sbjct: 9061 FDPKR 9065
>sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated protein OS=Parascaris
univalens GN=PUMA1 PE=2 SV=1
Length = 1955
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 148 DIATLKTKIKKLESECEMKDKEANAAKAEAEALKKQ------SEGFLLEYD--RLLADNQ 199
D+ LK K++KLE EC+ K KE N A E E + +Q S LLE D + + +
Sbjct: 740 DVDLLKEKLRKLEQECD-KLKEENKALHEDEQIARQMCKEEASRIHLLERDLKDAMTEVE 798
Query: 200 HLRNQLESIDHSDSKK 215
L+ QL+ +D +S++
Sbjct: 799 ELKKQLQKMDEENSER 814
>sp|B8F4Q5|SYS_HAEPS Serine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=serS PE=3 SV=1
Length = 434
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 118 RKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEA 177
RKA++ + ++ + ++ N+ K G+DI+ L T++ + SE + AAK E
Sbjct: 38 RKALQVKAENLQAERNARSKNIGAAKARGEDISALLTEVDTMGSELD-------AAKVEL 90
Query: 178 EALKKQSEGFLLEYDRLLAD 197
+ ++ + LL L AD
Sbjct: 91 DKVQAEIRELLLNIPNLPAD 110
>sp|A5W1H6|SYS_PSEP1 Serine--tRNA ligase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=serS PE=3 SV=1
Length = 426
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 39/70 (55%)
Query: 111 IRELRLLRKAMEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEA 170
I L RKA++ +Q ++ + ++ ++ + K G+DIA L ++++ +E E
Sbjct: 30 IESLEERRKAVQTRTEQLQAERNARSKSIGQAKAKGEDIAPLMADVERMANELAAGKAEL 89
Query: 171 NAAKAEAEAL 180
+A +AE +++
Sbjct: 90 DAIQAELDSI 99
>sp|Q6LUJ8|FTSH_PHOPR ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum
GN=ftsH PE=3 SV=1
Length = 696
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 82 ILMSKHMLEASLMGFLLFLSLMMDRLHHYIRELRL----LRKAMEAAKKQTRSFEDGKND 137
+ +KHM + + + + ++DR + RE+ + AM+ A + + + + D
Sbjct: 558 VTQTKHMSDDTARAIDMEIRALIDRNYERAREILAQNMDIMHAMKDALMKYETIDAAQID 617
Query: 138 NVDERK-------GLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEALKKQSEGFLLE 190
++ RK G GD +K+ ES E K + A AKAEA ++
Sbjct: 618 DLMARKSEIRAPKGWGDTDDVMKSSPTTSESAPEAKTESAPEAKAEANVETEEKP----- 672
Query: 191 YDRLLADNQHLRNQLESIDHSDSKK 215
+ AD++ L+ + E D K
Sbjct: 673 ---VAADSEELKPKAEQAPKEDDKP 694
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,675,456
Number of Sequences: 539616
Number of extensions: 2501879
Number of successful extensions: 14628
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 13802
Number of HSP's gapped (non-prelim): 1166
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)