Query 027899
Match_columns 217
No_of_seqs 128 out of 244
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 04:19:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027899.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027899hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xrda1 f.3.1.1 (A:1-52) Light 29.7 12 0.0009 23.7 1.8 12 100-111 16-27 (52)
2 d2axtl1 f.23.31.1 (L:1-37) Pho 18.9 35 0.0025 19.9 2.2 13 103-115 22-34 (37)
3 d1h5oa_ g.9.1.2 (A:) Crotamine 17.7 24 0.0018 21.0 1.3 16 18-33 15-30 (42)
4 d1iyca_ g.31.1.2 (A:) Antifung 12.3 30 0.0022 19.8 0.6 8 83-90 16-23 (36)
5 d2j8cl1 f.26.1.1 (L:1-281) L ( 12.0 69 0.005 26.3 3.1 37 100-136 228-265 (281)
6 d1hvwa_ g.3.6.2 (A:) Atracotox 10.3 54 0.0039 17.4 1.2 12 21-37 1-12 (26)
7 d2j8cm1 f.26.1.1 (M:1-303) M ( 9.3 98 0.0072 25.6 3.2 37 100-136 264-300 (303)
8 d1nuba2 g.3.11.3 (A:53-77) Dom 9.0 46 0.0033 17.9 0.6 10 83-92 6-15 (26)
9 d3ehbb2 f.17.2.1 (B:1-107) Bac 8.2 1.9E+02 0.014 19.4 4.0 33 95-127 28-60 (107)
10 d2i5nl1 f.26.1.1 (L:1-273) L ( 7.9 1.5E+02 0.011 24.0 3.7 35 101-135 229-264 (273)
No 1
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=29.66 E-value=12 Score=23.69 Aligned_cols=12 Identities=58% Similarity=0.949 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 027899 100 QLHIFIFVLALF 111 (217)
Q Consensus 100 QLHIFIFVLAv~ 111 (217)
-+++|.|+||++
T Consensus 16 a~~~fL~~LAl~ 27 (52)
T d1xrda1 16 GLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 378999999964
No 2
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=18.90 E-value=35 Score=19.92 Aligned_cols=13 Identities=46% Similarity=0.800 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHH
Q 027899 103 IFIFVLALFHVLY 115 (217)
Q Consensus 103 IFIFVLAv~HV~y 115 (217)
.+||||||.--.|
T Consensus 22 Llifvl~vLFssY 34 (37)
T d2axtl1 22 LLILVLALLFSSY 34 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4899999875544
No 3
>d1h5oa_ g.9.1.2 (A:) Crotamine {South american rattlesnake (Crotalus durissus terrificus) [TaxId: 8732]}
Probab=17.73 E-value=24 Score=20.97 Aligned_cols=16 Identities=38% Similarity=0.657 Sum_probs=10.3
Q ss_pred cccccccCCCCccccC
Q 027899 18 SKICIPESVANTWHPC 33 (217)
Q Consensus 18 skICIp~s~~~~mlPC 33 (217)
.+||+|+|--.--+.|
T Consensus 15 ~~iclppssd~gkmdc 30 (42)
T d1h5oa_ 15 EKICLPPSSDFGKMDC 30 (42)
T ss_dssp TSCCSSSSCBCCSSSS
T ss_pred ceeECCCccccccccC
Confidence 5799999854333355
No 4
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=12.32 E-value=30 Score=19.81 Aligned_cols=8 Identities=63% Similarity=1.219 Sum_probs=6.4
Q ss_pred ccCCCCcc
Q 027899 83 EKCSKGKV 90 (217)
Q Consensus 83 ~~C~kGkv 90 (217)
..|+||||
T Consensus 16 sncpkgkv 23 (36)
T d1iyca_ 16 SNCPKGKV 23 (36)
T ss_dssp SCCCSSCE
T ss_pred cCCCCcce
Confidence 36999987
No 5
>d2j8cl1 f.26.1.1 (L:1-281) L (light) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=12.02 E-value=69 Score=26.31 Aligned_cols=37 Identities=24% Similarity=0.511 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHh
Q 027899 100 QLHIFIFVLALFHVLYSILTMALSRAK-MKKWKKWEKE 136 (217)
Q Consensus 100 QLHIFIFVLAv~HV~ys~lTm~Lg~~K-ir~Wk~WE~e 136 (217)
-+|++-..+||.=+..|.+-++|.+.- ++.|-.|=+-
T Consensus 228 ~IHR~~~~~av~~~~~saigIllsGtv~~~~W~~Ww~w 265 (281)
T d2j8cl1 228 GIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQW 265 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTBTTTBCSCHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHhheeEEEeCCcccCcHHHHHHH
Confidence 478899999999999999999999987 8888877553
No 6
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=10.33 E-value=54 Score=17.44 Aligned_cols=12 Identities=42% Similarity=1.179 Sum_probs=8.6
Q ss_pred ccccCCCCccccCCCCC
Q 027899 21 CIPESVANTWHPCDKER 37 (217)
Q Consensus 21 CIp~s~~~~mlPC~~~~ 37 (217)
|||+. -||+..+
T Consensus 1 cipsg-----qpcpyne 12 (26)
T d1hvwa_ 1 CIPSG-----QPCPYNE 12 (26)
T ss_dssp CBCTT-----SBCSSTT
T ss_pred CCCCC-----CcCCCCc
Confidence 88886 5887654
No 7
>d2j8cm1 f.26.1.1 (M:1-303) M (medium) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=9.30 E-value=98 Score=25.59 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHh
Q 027899 100 QLHIFIFVLALFHVLYSILTMALSRAKMKKWKKWEKE 136 (217)
Q Consensus 100 QLHIFIFVLAv~HV~ys~lTm~Lg~~Kir~Wk~WE~e 136 (217)
-+|++-..+||.=+..|.+-++|.+.-+..|-.|-.+
T Consensus 264 ~IHr~~~~~av~~~~~saigIllsGtvvd~W~~w~~~ 300 (303)
T d2j8cm1 264 GIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQN 300 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTBTTTBSCHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhheeEEEecccccCHHHHHHH
Confidence 3899999999999999999999999999999888653
No 8
>d1nuba2 g.3.11.3 (A:53-77) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.96 E-value=46 Score=17.90 Aligned_cols=10 Identities=40% Similarity=0.647 Sum_probs=7.2
Q ss_pred ccCCCCcccc
Q 027899 83 EKCSKGKVPF 92 (217)
Q Consensus 83 ~~C~kGkvpl 92 (217)
.+|++|||-=
T Consensus 6 hhck~gkvce 15 (26)
T d1nuba2 6 HHCKHGKVCE 15 (26)
T ss_dssp CCCCTTEEEE
T ss_pred cccccCcEee
Confidence 3688898743
No 9
>d3ehbb2 f.17.2.1 (B:1-107) Bacterial aa3 type cytochrome c oxidase subunit II {Paracoccus denitrificans [TaxId: 266]}
Probab=8.15 E-value=1.9e+02 Score=19.37 Aligned_cols=33 Identities=9% Similarity=0.224 Sum_probs=17.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027899 95 EDGLHQLHIFIFVLALFHVLYSILTMALSRAKM 127 (217)
Q Consensus 95 ~egLHQLHIFIFVLAv~HV~ys~lTm~Lg~~Ki 127 (217)
.|.+-.+|-++++++++=.+.-...|.....|.
T Consensus 28 ae~i~~lh~~v~~i~~~I~~~V~~~~~~~~~~~ 60 (107)
T d3ehbb2 28 AHDQQWLDHFVLYIITAVTIFVCLLLLICIVRF 60 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 456777777777666654333333344444444
No 10
>d2i5nl1 f.26.1.1 (L:1-273) L (light) subunit {Rhodopseudomonas viridis [TaxId: 1079]}
Probab=7.86 E-value=1.5e+02 Score=24.01 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHH
Q 027899 101 LHIFIFVLALFHVLYSILTMALSRAK-MKKWKKWEK 135 (217)
Q Consensus 101 LHIFIFVLAv~HV~ys~lTm~Lg~~K-ir~Wk~WE~ 135 (217)
+|+.-..+|+.=++.|.+-++|.+.- ++.|-.|=+
T Consensus 229 IHR~~~~~A~~~~~~s~igIllsG~~~~~~W~~ww~ 264 (273)
T d2i5nl1 229 IHRLGLFLASNIFLTGAFGTIASGPFWTRGWPEWWG 264 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHBTTTBCSCHHHHTH
T ss_pred HHHHHHHHHHHHHHHhheEEEEECCcccCChhHHHH
Confidence 67777888888899999999999976 888888854
Done!