BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027900
MSQALSNLIGISVPLSPRRSRDSGCNKFKFKFDVKAQAATGESRRDNFDHLQRANSKHHQ
PQSKKRVAPVPPVGLWDRFPTARTVQQMMETMERMLEEPFAYSGAWPLPLPTETGGFNSR
GRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNN
GNGEADEEEGDWSAKSYGRYSSRIALPENVQFDKDYS

High Scoring Gene Products

Symbol, full name Information P value
HSP21
AT4G27670
protein from Arabidopsis thaliana 7.6e-22
HSP26.7
26.7 kDa heat shock protein, chloroplastic
protein from Oryza sativa Japonica Group 1.4e-15
HSP23.6-MITO
AT4G25200
protein from Arabidopsis thaliana 9.0e-07
AT5G51440 protein from Arabidopsis thaliana 2.1e-06
AT1G52560 protein from Arabidopsis thaliana 0.00020

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027900
        (217 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2137762 - symbol:HSP21 "AT4G27670" species:370...   208  7.6e-22   2
UNIPROTKB|Q10P60 - symbol:HSP26.7 "26.7 kDa heat shock pr...   164  1.4e-15   2
TAIR|locus:2122649 - symbol:HSP23.6-MITO "AT4G25200" spec...   116  9.0e-07   2
TAIR|locus:2163670 - symbol:AT5G51440 "AT5G51440" species...   112  2.1e-06   2
TAIR|locus:2035079 - symbol:AT1G52560 "AT1G52560" species...    83  0.00020   2


>TAIR|locus:2137762 [details] [associations]
            symbol:HSP21 "AT4G27670" species:3702 "Arabidopsis
            thaliana" [GO:0009408 "response to heat" evidence=IEP;ISS;RCA]
            [GO:0009507 "chloroplast" evidence=ISM;NAS] [GO:0009644 "response
            to high light intensity" evidence=IEP;RCA] [GO:0042542 "response to
            hydrogen peroxide" evidence=IEP;RCA] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
            Pfam:PF00011 InterPro:IPR002068 GO:GO:0009507 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009408 EMBL:AL161571
            eggNOG:COG0071 InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
            GO:GO:0009644 GO:GO:0042542 EMBL:AL035602 KO:K13993
            HOGENOM:HOG000238886 EMBL:X54102 EMBL:M94455 EMBL:AK119078
            EMBL:DQ446875 EMBL:DQ653229 IPI:IPI00536974 PIR:S35240
            RefSeq:NP_194497.1 UniGene:At.5368 ProteinModelPortal:P31170
            SMR:P31170 STRING:P31170 PRIDE:P31170 EnsemblPlants:AT4G27670.1
            GeneID:828881 KEGG:ath:AT4G27670 TAIR:At4g27670 InParanoid:P31170
            OMA:SPMRTMR PhylomeDB:P31170 ProtClustDB:CLSN2719487
            Genevestigator:P31170 Uniprot:P31170
        Length = 227

 Score = 208 (78.3 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
 Identities = 57/154 (37%), Positives = 81/154 (52%)

Query:    14 PLSPRRSRDS-GCNKFKFKFDVK--AQAATGESRRDNFDHLQRANSKHHQPQS-KKR--- 66
             PL+P  S  S     F   F  K  ++    + R ++ D +Q+   K +Q  S +KR   
Sbjct:    15 PLAPSPSVSSKSATPFSVSFPRKIPSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQ 74

Query:    67 --VAPVPPVGLWDRFPTARTVQQMMETMERMLEEPFAYSGAWPLPLPTETGGFN-SRGRT 123
                  V P GL D     RT++QM++TM+RM E+    SG          GG   S  R 
Sbjct:    75 RLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR-------NRGGSGVSEIRA 127

Query:   124 PWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKML 157
             PW+IKE E+E  MRFDMPG++K+DVK+ VE+ +L
Sbjct:   128 PWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVL 161

 Score = 61 (26.5 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query:   192 WSAKSYGRYSSRIALPENVQFDK 214
             WS +S   Y +R+ LP+N + DK
Sbjct:   176 WSGRSVSSYGTRLQLPDNCEKDK 198


>UNIPROTKB|Q10P60 [details] [associations]
            symbol:HSP26.7 "26.7 kDa heat shock protein, chloroplastic"
            species:39947 "Oryza sativa Japonica Group" [GO:0009408 "response
            to heat" evidence=IEP] Pfam:PF00011 InterPro:IPR002068
            GO:GO:0009507 EMBL:DP000009 EMBL:AP008209 GO:GO:0009408
            eggNOG:COG0071 InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
            EMBL:CM000140 KO:K13993 OMA:SPMRTMR EMBL:AB020973 EMBL:AK063618
            EMBL:AK120045 EMBL:AK120048 RefSeq:NP_001049541.1 UniGene:Os.8926
            ProteinModelPortal:Q10P60 PRIDE:Q10P60
            EnsemblPlants:LOC_Os03g14180.1 GeneID:4332237
            KEGG:dosa:Os03t0245800-02 KEGG:osa:4332237 Gramene:Q10P60
            ProtClustDB:CLSN2693727 Uniprot:Q10P60
        Length = 240

 Score = 164 (62.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 41/131 (31%), Positives = 67/131 (51%)

Query:    36 AQAATGESRRDN--FD-HL------QRANSKHHQPQSKKRVAPVPPVGLWDRFPTARTVQ 86
             A A+  +  RDN   D H+      Q+ N+   +P+    +  + P GL D     RT++
Sbjct:    42 AVASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMR 101

Query:    87 QMMETMERMLEEPFAYSGAWPLPLPTETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQ 146
             QM++TM+R+ ++      A   P            R PW++ E + E  MRFDMPG++++
Sbjct:   102 QMLDTMDRIFDDV-----ALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSRE 156

Query:   147 DVKVWVEEKML 157
             +VKV VE+  L
Sbjct:   157 EVKVMVEDDAL 167

 Score = 45 (20.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query:   192 WSAKSYGRYSSRIALPENVQFDK 214
             W  +S   Y  R+ALP+     K
Sbjct:   189 WKERSVSSYDMRLALPDECDKSK 211


>TAIR|locus:2122649 [details] [associations]
            symbol:HSP23.6-MITO "AT4G25200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009408 "response to heat"
            evidence=ISS;RCA] [GO:0046686 "response to cadmium ion"
            evidence=IEP] [GO:0006457 "protein folding" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] Pfam:PF00011 InterPro:IPR002068 GO:GO:0005739
            GO:GO:0046686 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
            InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031 EMBL:AL161562
            EMBL:AL035396 KO:K13993 HOGENOM:HOG000238886
            ProtClustDB:CLSN2685665 EMBL:U72958 EMBL:X98375 EMBL:Y11864
            EMBL:AK119118 EMBL:BT005229 EMBL:AK317291 IPI:IPI00531920
            PIR:T05541 RefSeq:NP_194250.1 UniGene:At.5398
            ProteinModelPortal:Q96331 SMR:Q96331 IntAct:Q96331 STRING:Q96331
            PaxDb:Q96331 PRIDE:Q96331 EnsemblPlants:AT4G25200.1 GeneID:828623
            KEGG:ath:AT4G25200 TAIR:At4g25200 eggNOG:NOG325209
            InParanoid:Q96331 OMA:QERNDVR PhylomeDB:Q96331
            Genevestigator:Q96331 GermOnline:AT4G25200 Uniprot:Q96331
        Length = 210

 Score = 116 (45.9 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
 Identities = 27/84 (32%), Positives = 48/84 (57%)

Query:    75 LWDRFPTARTVQQMMETMERMLEEPFAYSGAWPLPLPTETGGFNSRG-RTPWEIKEGENE 133
             ++D F   R+V Q++  M++ +E P          L + T G  + G R  W+IKE ++ 
Sbjct:    68 VFDPFSPTRSVSQVLNLMDQFMENP----------LLSATRGMGASGARRGWDIKEKDDA 117

Query:   134 YTMRFDMPGMTKQDVKVWVEEKML 157
               +R DMPG++++DVK+ +E+  L
Sbjct:   118 LYLRIDMPGLSREDVKLALEQDTL 141

 Score = 38 (18.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query:   199 RYSSRIALPENV 210
             R++SRI LP+ +
Sbjct:   163 RFTSRIGLPDKI 174


>TAIR|locus:2163670 [details] [associations]
            symbol:AT5G51440 "AT5G51440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009408 "response to heat"
            evidence=ISS;RCA] [GO:0006457 "protein folding" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] Pfam:PF00011 InterPro:IPR002068 GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
            eggNOG:COG0071 InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
            EMBL:AB025621 KO:K13993 EMBL:BT008572 EMBL:BT008645 EMBL:AK229697
            EMBL:AY086693 IPI:IPI00546075 RefSeq:NP_199957.1 UniGene:At.29679
            ProteinModelPortal:Q9FGM9 SMR:Q9FGM9 IntAct:Q9FGM9 STRING:Q9FGM9
            PaxDb:Q9FGM9 PRIDE:Q9FGM9 EnsemblPlants:AT5G51440.1 GeneID:835218
            KEGG:ath:AT5G51440 TAIR:At5g51440 HOGENOM:HOG000238886
            InParanoid:Q9FGM9 OMA:WNAKEDE PhylomeDB:Q9FGM9
            ProtClustDB:CLSN2685665 Uniprot:Q9FGM9
        Length = 210

 Score = 112 (44.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 26/82 (31%), Positives = 46/82 (56%)

Query:    77 DRFPTARTVQQMMETMERMLEEPFAYSGAWPLPLPTETGGFNSRG-RTPWEIKEGENEYT 135
             D F   R++ QM+  M+++ E          +PL + T G  + G R  W +KE ++   
Sbjct:    72 DPFTPTRSLSQMLNFMDQVSE----------IPLVSATRGMGASGVRRGWNVKEKDDALH 121

Query:   136 MRFDMPGMTKQDVKVWVEEKML 157
             +R DMPG++++DVK+ +E+  L
Sbjct:   122 LRIDMPGLSREDVKLALEQNTL 143

 Score = 41 (19.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query:   199 RYSSRIALPENV 210
             R++SRI LPE V
Sbjct:   163 RFTSRIELPEKV 174


>TAIR|locus:2035079 [details] [associations]
            symbol:AT1G52560 "AT1G52560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009408 "response to heat"
            evidence=IEP;ISS;RCA] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0009644 "response to high light intensity" evidence=IEP;RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA]
            [GO:0006457 "protein folding" evidence=RCA] [GO:0010286 "heat
            acclimation" evidence=RCA] Pfam:PF00011 InterPro:IPR002068
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009408
            eggNOG:COG0071 InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
            GO:GO:0009644 GO:GO:0042542 EMBL:AC008016 KO:K13993
            HOGENOM:HOG000238886 EMBL:BT010839 EMBL:BT011308 IPI:IPI00531096
            IPI:IPI00891648 PIR:C96566 RefSeq:NP_001117476.1 RefSeq:NP_175665.1
            UniGene:At.37577 ProteinModelPortal:Q9SSQ8 SMR:Q9SSQ8 IntAct:Q9SSQ8
            STRING:Q9SSQ8 PaxDb:Q9SSQ8 PRIDE:Q9SSQ8 EnsemblPlants:AT1G52560.1
            GeneID:841687 KEGG:ath:AT1G52560 TAIR:At1g52560 InParanoid:Q9SSQ8
            OMA:KLRYEVP PhylomeDB:Q9SSQ8 ProtClustDB:CLSN2679732 Uniprot:Q9SSQ8
        Length = 232

 Score = 83 (34.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 13/32 (40%), Positives = 26/32 (81%)

Query:   126 EIKEGENEYTMRFDMPGMTKQDVKVWVEEKML 157
             ++KE ++ Y +R+++PG+TK+DVK+ V + +L
Sbjct:   128 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGIL 159

 Score = 63 (27.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 9/22 (40%), Positives = 18/22 (81%)

Query:   192 WSAKSYGRYSSRIALPENVQFD 213
             WS+KSYG Y++ ++LP++ + +
Sbjct:   180 WSSKSYGYYNTSLSLPDDAKVE 201


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      217       184   0.00078  110 3  11 22  0.46    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.34u 0.12s 17.46t   Elapsed:  00:00:01
  Total cpu time:  17.34u 0.12s 17.46t   Elapsed:  00:00:01
  Start:  Thu May  9 16:12:40 2013   End:  Thu May  9 16:12:41 2013

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