Query 027900
Match_columns 217
No_of_seqs 216 out of 1666
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 04:21:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027900.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027900hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.8 3.2E-21 1.1E-25 157.6 9.7 80 120-215 54-134 (161)
2 3gla_A Low molecular weight he 99.8 1.6E-20 5.5E-25 141.5 10.8 79 121-215 3-81 (100)
3 3aab_A Putative uncharacterize 99.8 5.6E-21 1.9E-25 149.7 6.2 96 86-215 2-98 (123)
4 1gme_A Heat shock protein 16.9 99.8 2.4E-20 8.1E-25 151.6 7.9 78 122-215 43-121 (151)
5 4fei_A Heat shock protein-rela 99.8 1.9E-19 6.5E-24 136.9 9.2 74 121-215 5-78 (102)
6 2wj5_A Heat shock protein beta 99.7 1.5E-16 5E-21 121.1 9.0 69 124-215 3-71 (101)
7 3l1e_A Alpha-crystallin A chai 99.7 4.3E-16 1.5E-20 119.6 10.2 69 124-215 4-72 (106)
8 3q9p_A Heat shock protein beta 99.7 2.9E-16 1E-20 116.0 8.3 66 127-215 2-67 (85)
9 2bol_A TSP36, small heat shock 99.6 5.5E-16 1.9E-20 139.8 10.5 71 121-215 97-171 (314)
10 2y1y_A Alpha-crystallin B chai 99.6 7.6E-15 2.6E-19 109.2 8.2 65 128-215 2-66 (90)
11 2klr_A Alpha-crystallin B chai 99.6 6.8E-15 2.3E-19 122.6 7.9 70 124-216 65-134 (175)
12 2bol_A TSP36, small heat shock 99.5 7.3E-15 2.5E-19 132.5 8.1 74 123-216 221-298 (314)
13 2xcm_C SGT1-like protein, cyto 98.0 7.6E-06 2.6E-10 59.5 5.8 62 122-214 2-63 (92)
14 1rl1_A Suppressor of G2 allele 98.0 1.3E-05 4.5E-10 60.8 7.0 62 122-214 9-70 (114)
15 1x5m_A Calcyclin-binding prote 95.5 0.074 2.5E-06 41.0 8.7 40 123-162 21-63 (127)
16 1wfi_A Nuclear distribution ge 95.1 0.069 2.4E-06 41.3 7.5 42 121-162 6-50 (131)
17 1wh0_A Ubiquitin carboxyl-term 95.1 0.044 1.5E-06 43.3 6.2 42 122-163 19-61 (134)
18 1wgv_A KIAA1068 protein; CS do 94.9 0.074 2.5E-06 40.8 6.9 42 121-162 18-61 (124)
19 3igf_A ALL4481 protein; two-do 94.8 0.029 9.9E-07 51.1 5.0 37 123-161 298-334 (374)
20 2o30_A Nuclear movement protei 94.7 0.077 2.6E-06 41.2 6.6 39 123-161 5-44 (131)
21 2rh0_A NUDC domain-containing 93.9 0.12 4.1E-06 41.6 6.3 41 122-162 13-54 (157)
22 1ejf_A Progesterone receptor P 93.9 0.16 5.5E-06 39.0 6.8 38 124-163 5-42 (125)
23 3qor_A Nuclear migration prote 93.7 0.25 8.4E-06 37.9 7.5 43 120-162 14-59 (121)
24 2kmw_A Uncharacterized protein 89.9 0.24 8.1E-06 39.6 3.6 38 123-162 5-43 (150)
25 2cg9_X CO-chaperone protein SB 88.0 0.17 5.9E-06 39.5 1.5 39 123-163 7-52 (134)
26 4fei_A Heat shock protein-rela 83.2 3.9 0.00013 29.8 6.8 30 137-166 66-96 (102)
27 3eud_A Protein SHQ1; CS domain 76.1 12 0.00041 28.9 7.7 41 122-162 17-59 (115)
28 3l1e_A Alpha-crystallin A chai 72.0 6.2 0.00021 29.1 5.1 33 134-166 57-91 (106)
29 3q9p_A Heat shock protein beta 70.7 6.6 0.00023 27.7 4.8 32 132-163 50-83 (85)
30 3gla_A Low molecular weight he 70.7 8.1 0.00028 27.6 5.3 32 133-164 65-97 (100)
31 2wj5_A Heat shock protein beta 70.0 6.2 0.00021 28.8 4.6 33 134-166 56-90 (101)
32 2k8q_A Protein SHQ1; beta-sand 70.0 4.2 0.00014 32.2 3.9 40 123-162 4-45 (134)
33 2y1y_A Alpha-crystallin B chai 66.4 5.6 0.00019 28.3 3.6 32 134-165 51-84 (90)
34 4eld_A MJ16.5-P1, small heat s 65.5 9.1 0.00031 30.1 5.1 32 134-165 119-151 (161)
35 2klr_A Alpha-crystallin B chai 59.3 10 0.00035 30.7 4.4 32 134-165 118-151 (175)
36 3aab_A Putative uncharacterize 54.8 14 0.00049 27.5 4.3 32 133-164 82-115 (123)
37 1gme_A Heat shock protein 16.9 54.6 19 0.00066 28.0 5.2 32 134-165 106-138 (151)
38 2cql_A OK/SW-CL.103, 60S ribos 48.3 14 0.00047 27.5 3.2 20 145-164 20-39 (100)
39 3jx8_A Putative lipoprotein; s 32.8 36 0.0012 28.3 3.7 39 125-163 34-72 (250)
40 2kgs_A Uncharacterized protein 31.9 28 0.00097 26.6 2.7 26 140-165 2-27 (132)
41 1q5l_A Chaperone protein DNAK; 30.9 1.7E+02 0.0059 22.1 7.4 42 123-164 64-119 (135)
42 2ks0_A Uncharacterized protein 30.4 26 0.00088 24.7 2.0 23 143-165 18-40 (71)
43 1rl1_A Suppressor of G2 allele 29.7 64 0.0022 23.3 4.3 34 131-164 53-87 (114)
44 2op6_A Heat shock 70 kDa prote 29.5 1.4E+02 0.0049 22.6 6.5 41 123-163 47-101 (152)
45 2gjh_A Designed protein; oblig 27.6 39 0.0013 22.7 2.4 19 145-163 32-50 (62)
46 2uwa_A Cellulase; glycoside hy 24.5 1.2E+02 0.004 25.9 5.6 43 144-209 31-74 (274)
47 1rl6_A Protein (ribosomal prot 24.2 54 0.0018 26.7 3.2 20 145-164 11-30 (177)
48 3lyc_A Putative pectinase; str 24.0 42 0.0014 27.6 2.5 38 127-164 30-67 (241)
49 4a17_E RPL9, 60S ribosomal pro 24.0 54 0.0018 27.0 3.2 20 145-164 13-32 (188)
50 1vq8_E 50S ribosomal protein L 23.9 55 0.0019 26.7 3.2 20 145-164 9-28 (178)
51 3u5e_H L8, RP24, YL11, 60S rib 23.6 55 0.0019 27.0 3.2 20 145-164 13-32 (191)
52 3h0x_A 78 kDa glucose-regulate 23.5 2.4E+02 0.0081 21.7 6.8 42 123-164 47-102 (152)
53 3iz5_F 60S ribosomal protein L 23.4 56 0.0019 26.9 3.2 20 145-164 13-32 (190)
54 3v2d_H 50S ribosomal protein L 22.7 48 0.0016 27.0 2.6 20 145-164 12-31 (180)
55 2zkr_e 60S ribosomal protein L 21.8 63 0.0022 26.6 3.2 21 144-164 12-32 (192)
56 2kgs_A Uncharacterized protein 20.4 49 0.0017 25.2 2.1 20 146-165 77-96 (132)
57 3j21_F 50S ribosomal protein L 20.2 47 0.0016 27.2 2.1 20 145-164 14-33 (184)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.84 E-value=3.2e-21 Score=157.59 Aligned_cols=80 Identities=23% Similarity=0.317 Sum_probs=71.3
Q ss_pred CCCcceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEe-eee
Q 027900 120 RGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAK-SYG 198 (217)
Q Consensus 120 ~~~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er-~~G 198 (217)
..++|+||+|++++|+|+++|||++++||+|+|+++.|+|+|+++.+.+ .++..++++|| ++|
T Consensus 54 ~~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~----------------~~~~~~~~~Er~~~g 117 (161)
T 4eld_A 54 KGFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMI----------------TESERIIYSEIPEEE 117 (161)
T ss_dssp ESCCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCC----------------CSSCEEEEECSCCCC
T ss_pred CcccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEccccc----------------CCCceEEEEEeeccc
Confidence 3577899999999999999999999999999999999999999865432 23456888999 999
Q ss_pred eEEEEEECCCCCCCCCc
Q 027900 199 RYSSRIALPENVQFDKD 215 (217)
Q Consensus 199 ~F~R~i~LPe~Vd~dki 215 (217)
+|+|+|.||.+||.++|
T Consensus 118 ~f~R~~~LP~~vd~~~i 134 (161)
T 4eld_A 118 EIYRTIKLPATVKEENA 134 (161)
T ss_dssp EEEEEEECSSCBCGGGC
T ss_pred cEEEEEECCCCcccccE
Confidence 99999999999999886
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.84 E-value=1.6e-20 Score=141.47 Aligned_cols=79 Identities=22% Similarity=0.435 Sum_probs=71.1
Q ss_pred CCcceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeE
Q 027900 121 GRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRY 200 (217)
Q Consensus 121 ~~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F 200 (217)
..|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.+ .++..++++||.+|+|
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~----------------~~~~~~~~~er~~g~f 66 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESS----------------TETERFSRIERRYGSF 66 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGG----------------SSGGGEEEECCCCEEE
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCc----------------cCCccEEEEeecceEE
Confidence 358899999999999999999999999999999999999999976532 2346788899999999
Q ss_pred EEEEECCCCCCCCCc
Q 027900 201 SSRIALPENVQFDKD 215 (217)
Q Consensus 201 ~R~i~LPe~Vd~dki 215 (217)
+|+|.||.+||.++|
T Consensus 67 ~r~~~LP~~vd~~~i 81 (100)
T 3gla_A 67 HRRFALPDSADADGI 81 (100)
T ss_dssp EEEEECCTTBCTTSC
T ss_pred EEEEECCCCcChHHe
Confidence 999999999999886
No 3
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.82 E-value=5.6e-21 Score=149.67 Aligned_cols=96 Identities=18% Similarity=0.154 Sum_probs=71.9
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCcceeEEecCCEEEEEEecCCCCCCCeEEEEEC-CEEEEEEEec
Q 027900 86 QQMMETMERMLEEPFAYSGAWPLPLPTETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEE-KMLVVKAQKV 164 (217)
Q Consensus 86 ~qm~~~MdRlFdd~~~~~~~~p~~~~~~~~g~~~~~~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved-~~L~I~Ge~~ 164 (217)
+.|+++|+++|++++..+. ...+|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++
T Consensus 2 ~~~~~em~~~~~~~~~~~~--------------~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~ 67 (123)
T 3aab_A 2 YYLGKELQKRSEELSRGFY--------------ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAERE 67 (123)
T ss_dssp ------------CCCHHHH--------------HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECC
T ss_pred hhHHHHHHHHHHHHhhhcc--------------ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEe
Confidence 4567899999998764211 023578999999999999999999999999999999 9999999985
Q ss_pred cCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEEEECCCCCCCCCc
Q 027900 165 PKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSRIALPENVQFDKD 215 (217)
Q Consensus 165 ~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~i~LPe~Vd~dki 215 (217)
.+ . +..|+++||++ +|.|+|.||.+||.++|
T Consensus 68 ~~------------------~-~~~~~~~Er~~-~f~R~~~LP~~vd~~~i 98 (123)
T 3aab_A 68 IT------------------E-PGVKYLTQRPK-YVRKVIRLPYNVAKDAE 98 (123)
T ss_dssp CC------------------C-CSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred cc------------------C-CCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence 43 1 35788899999 99999999999999987
No 4
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.81 E-value=2.4e-20 Score=151.57 Aligned_cols=78 Identities=24% Similarity=0.428 Sum_probs=69.3
Q ss_pred CcceeEEecCCEEEEEEecCCCCCCCeEEEEE-CCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeE
Q 027900 122 RTPWEIKEGENEYTMRFDMPGMTKQDVKVWVE-EKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRY 200 (217)
Q Consensus 122 ~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ve-d~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F 200 (217)
.|++||+|++++|+|.++|||++++||+|+|+ ++.|+|+|+++.+.+ .++..|+++||++|+|
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~----------------~~~~~~~~~Er~~g~F 106 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKE----------------DKNDKWHRVERSSGKF 106 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCC----------------CTTCEEEECCCCCCCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccc----------------cCCceEEEEeEeccEE
Confidence 57899999999999999999999999999995 789999999865432 2356788899999999
Q ss_pred EEEEECCCCCCCCCc
Q 027900 201 SSRIALPENVQFDKD 215 (217)
Q Consensus 201 ~R~i~LPe~Vd~dki 215 (217)
+|+|.||++||.++|
T Consensus 107 ~R~~~LP~~vd~~~i 121 (151)
T 1gme_A 107 VRRFRLLEDAKVEEV 121 (151)
T ss_dssp EEEEECSSCCCGGGC
T ss_pred EEEEECCCCccccce
Confidence 999999999999876
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.79 E-value=1.9e-19 Score=136.91 Aligned_cols=74 Identities=18% Similarity=0.275 Sum_probs=67.8
Q ss_pred CCcceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeE
Q 027900 121 GRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRY 200 (217)
Q Consensus 121 ~~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F 200 (217)
..|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++. +..++++||++|+|
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~---------------------~~~~~~~er~~g~f 63 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPG---------------------TEHLLRSERPSGRF 63 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECC---------------------CSSCSSCCSEEEEE
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEec---------------------CCCEEEEEEeccEE
Confidence 458899999999999999999999999999999999999999842 24678899999999
Q ss_pred EEEEECCCCCCCCCc
Q 027900 201 SSRIALPENVQFDKD 215 (217)
Q Consensus 201 ~R~i~LPe~Vd~dki 215 (217)
.|+|.||.+||.++|
T Consensus 64 ~R~~~LP~~vd~~~i 78 (102)
T 4fei_A 64 VRELAFPEPVRPASG 78 (102)
T ss_dssp EEEEECSSCBCTTCC
T ss_pred EEEEECCCCcchhHc
Confidence 999999999999876
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.67 E-value=1.5e-16 Score=121.11 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=60.2
Q ss_pred ceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEE
Q 027900 124 PWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSR 203 (217)
Q Consensus 124 pvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~ 203 (217)
.+||+|++++|+|.+||||++++||+|+|+++.|+|+|+++.+. ++.+|+++| |+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~------------------~~~~~~~~e-----F~R~ 59 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERP------------------DEHGFIARE-----FHRR 59 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECS------------------STTCCEEEE-----EEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc------------------CCCCEEEEE-----EEEE
Confidence 47999999999999999999999999999999999999986431 234566554 9999
Q ss_pred EECCCCCCCCCc
Q 027900 204 IALPENVQFDKD 215 (217)
Q Consensus 204 i~LPe~Vd~dki 215 (217)
|.||.+||.++|
T Consensus 60 ~~LP~~vd~~~i 71 (101)
T 2wj5_A 60 YRLPPGVDPAAV 71 (101)
T ss_dssp EECCTTBCTTCC
T ss_pred EECCCCcChhHC
Confidence 999999999987
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.66 E-value=4.3e-16 Score=119.61 Aligned_cols=69 Identities=17% Similarity=0.308 Sum_probs=58.6
Q ss_pred ceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEE
Q 027900 124 PWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSR 203 (217)
Q Consensus 124 pvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~ 203 (217)
..||+|++++|+|.+||||++++||+|+++++.|+|+|++.... ++.+|++ +.|.|+
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~------------------~~~~~~~-----~eF~R~ 60 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQ------------------DDHGYIS-----REFHRR 60 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEE------------------TTTEEEE-----EEEEEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc------------------CCCCEEE-----EEEEEE
Confidence 47999999999999999999999999999999999999975421 1233433 359999
Q ss_pred EECCCCCCCCCc
Q 027900 204 IALPENVQFDKD 215 (217)
Q Consensus 204 i~LPe~Vd~dki 215 (217)
|.||++||.++|
T Consensus 61 ~~LP~~vd~~~i 72 (106)
T 3l1e_A 61 YRLPSNVDQSAL 72 (106)
T ss_dssp EECCTTBCTTSC
T ss_pred EECCCCcChhHc
Confidence 999999999986
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.65 E-value=2.9e-16 Score=116.01 Aligned_cols=66 Identities=11% Similarity=0.245 Sum_probs=54.4
Q ss_pred EEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEEEEC
Q 027900 127 IKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSRIAL 206 (217)
Q Consensus 127 I~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~i~L 206 (217)
+.|++++|+|.+||||++++||+|+|+++.|+|+|+++.+. ++.+ ..+|+|.|+|.|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~------------------~~~~-----~~~~~F~R~~~L 58 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQ------------------DEHG-----YISRCFTRKYTL 58 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC------------------------------CCCEEEEEEEEC
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc------------------CCCC-----EEEEEEEEEEEC
Confidence 46899999999999999999999999999999999986432 1112 247899999999
Q ss_pred CCCCCCCCc
Q 027900 207 PENVQFDKD 215 (217)
Q Consensus 207 Pe~Vd~dki 215 (217)
|++||.++|
T Consensus 59 P~~vd~~~i 67 (85)
T 3q9p_A 59 PPGVDPTQV 67 (85)
T ss_dssp CTTCCGGGC
T ss_pred CCCcChHHc
Confidence 999999887
No 9
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.64 E-value=5.5e-16 Score=139.79 Aligned_cols=71 Identities=18% Similarity=0.227 Sum_probs=62.9
Q ss_pred CCcceeEEecCC----EEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEee
Q 027900 121 GRTPWEIKEGEN----EYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKS 196 (217)
Q Consensus 121 ~~ppvDI~Et~d----~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~ 196 (217)
..|++||+|+++ +|+|.+||||++|+||+|+|+++.|+|+|+++.+. ++ ++.
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~------------------e~------~r~ 152 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC------------------GD------AAM 152 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST------------------TC------CCB
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC------------------CC------CEE
Confidence 457899999999 99999999999999999999999999999986431 11 178
Q ss_pred eeeEEEEEECCCCCCCCCc
Q 027900 197 YGRYSSRIALPENVQFDKD 215 (217)
Q Consensus 197 ~G~F~R~i~LPe~Vd~dki 215 (217)
+|+|+|+|.||++||.++|
T Consensus 153 ~g~F~R~~~LP~~Vd~e~i 171 (314)
T 2bol_A 153 SESVGRSIPLPPSVDRNHI 171 (314)
T ss_dssp CCCEEEEEECCTTBCGGGC
T ss_pred EEEEEEEEECCCCcccccc
Confidence 9999999999999999887
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.56 E-value=7.6e-15 Score=109.20 Aligned_cols=65 Identities=14% Similarity=0.232 Sum_probs=52.0
Q ss_pred EecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEEEECC
Q 027900 128 KEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSRIALP 207 (217)
Q Consensus 128 ~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~i~LP 207 (217)
.+++++|+|.++|||++++||+|+++++.|+|+|+++.+. ++.+|+++ .|+|+|.||
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~------------------~~~~~~~~-----ef~R~~~LP 58 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQ------------------DEHGFISR-----EFHRKYRIP 58 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEE------------------CSSSEEEE-----EEEEEEECC
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc------------------CCCCEEEE-----EEEEEEECC
Confidence 4789999999999999999999999999999999985431 23345544 499999999
Q ss_pred CCCCCCCc
Q 027900 208 ENVQFDKD 215 (217)
Q Consensus 208 e~Vd~dki 215 (217)
.+||.++|
T Consensus 59 ~~vd~~~i 66 (90)
T 2y1y_A 59 ADVDPLTI 66 (90)
T ss_dssp TTBCGGGC
T ss_pred CCcChhHc
Confidence 99999876
No 11
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.55 E-value=6.8e-15 Score=122.61 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=56.5
Q ss_pred ceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEEEE
Q 027900 124 PWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYSSR 203 (217)
Q Consensus 124 pvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~R~ 203 (217)
.+||+|++++|+|.+||||+++|||+|+|+++.|+|+|+++.+. ++.+++.+ .|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~------------------~~~~~~~r-----eF~R~ 121 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQ------------------DEHGFISR-----EFHRK 121 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEE------------------ETTEEEEE-----EEEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc------------------cCCceEEE-----EEEEE
Confidence 37999999999999999999999999999999999999985431 12345444 39999
Q ss_pred EECCCCCCCCCcC
Q 027900 204 IALPENVQFDKDY 216 (217)
Q Consensus 204 i~LPe~Vd~dki~ 216 (217)
|.||++||.++|-
T Consensus 122 ~~LP~~Vd~~~i~ 134 (175)
T 2klr_A 122 YRIPADVDPLTIT 134 (175)
T ss_dssp EECTTTCCTTTCE
T ss_pred EECCCCcChhHeE
Confidence 9999999999873
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.54 E-value=7.3e-15 Score=132.47 Aligned_cols=74 Identities=20% Similarity=0.313 Sum_probs=56.4
Q ss_pred cceeEEecC---CEEEEEEec-CCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeee
Q 027900 123 TPWEIKEGE---NEYTMRFDM-PGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYG 198 (217)
Q Consensus 123 ppvDI~Et~---d~y~V~~dL-PGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G 198 (217)
...+|.|++ ++|+|.++| ||++|+||+|+|++|+|+|+|+++.+. +.++++||+||
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~--------------------~~~~~~Er~~g 280 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEE--------------------KTENASHSEHR 280 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC--------------------------------CE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccC--------------------CceEEEEEeee
Confidence 447887755 689999999 999999999999999999999986431 25788999999
Q ss_pred eEEEEEECCCCCCCCCcC
Q 027900 199 RYSSRIALPENVQFDKDY 216 (217)
Q Consensus 199 ~F~R~i~LPe~Vd~dki~ 216 (217)
+|+|+|.||++||.++|-
T Consensus 281 ~F~R~~~LP~~vd~~~i~ 298 (314)
T 2bol_A 281 EFYKAFVTPEVVDASKTQ 298 (314)
T ss_dssp EEEEEEECSSEECGGGCE
T ss_pred EEEEEEECCCCcChHHeE
Confidence 999999999999999873
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.03 E-value=7.6e-06 Score=59.48 Aligned_cols=62 Identities=23% Similarity=0.199 Sum_probs=52.0
Q ss_pred CcceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEE
Q 027900 122 RTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYS 201 (217)
Q Consensus 122 ~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~ 201 (217)
.+.++++++++.+.|.+.+||+.++||+|.++++.|+|++.... + ..|.
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~---------------------~----------~~y~ 50 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG---------------------E----------DAYY 50 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT---------------------S----------CCEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC---------------------C----------cEEE
Confidence 35689999999999999999999999999999999999986410 0 2477
Q ss_pred EEEECCCCCCCCC
Q 027900 202 SRIALPENVQFDK 214 (217)
Q Consensus 202 R~i~LPe~Vd~dk 214 (217)
..+.|+..|++++
T Consensus 51 ~~~~L~~~I~~~~ 63 (92)
T 2xcm_C 51 LQPRLFGKIIPDK 63 (92)
T ss_dssp ECCBBSSCBCGGG
T ss_pred EeeEcCCccCchh
Confidence 7888888888775
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.01 E-value=1.3e-05 Score=60.84 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=53.0
Q ss_pred CcceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcEEEEeeeeeEE
Q 027900 122 RTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGDWSAKSYGRYS 201 (217)
Q Consensus 122 ~ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~~~Er~~G~F~ 201 (217)
.+.+|++++++.+.|.+++||+.++||+|.++++.|+|++.... + ..|.
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~----------------------~---------~~y~ 57 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS----------------------G---------EDYN 57 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT----------------------S---------SEEE
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC----------------------C---------cEEE
Confidence 35689999999999999999999999999999999999987410 0 2577
Q ss_pred EEEECCCCCCCCC
Q 027900 202 SRIALPENVQFDK 214 (217)
Q Consensus 202 R~i~LPe~Vd~dk 214 (217)
..+.|+..|++++
T Consensus 58 ~~~~L~~~I~~e~ 70 (114)
T 1rl1_A 58 LKLELLHPIIPEQ 70 (114)
T ss_dssp EEECBSSCCCGGG
T ss_pred EEeeCCCcCCccc
Confidence 8889999999875
No 15
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.52 E-value=0.074 Score=41.01 Aligned_cols=40 Identities=10% Similarity=0.277 Sum_probs=37.4
Q ss_pred cceeEEecCCEEEEEEecCCC---CCCCeEEEEECCEEEEEEE
Q 027900 123 TPWEIKEGENEYTMRFDMPGM---TKQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 123 ppvDI~Et~d~y~V~~dLPGv---~keDV~V~Ved~~L~I~Ge 162 (217)
+.++++.+.+.+.|.+.+||+ .+++|.|.+..+.|.|...
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~ 63 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVK 63 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEEC
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEE
Confidence 468999999999999999999 8999999999999999874
No 16
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=95.15 E-value=0.069 Score=41.31 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=38.3
Q ss_pred CCcceeEEecCCEEEEEEecC-C--CCCCCeEEEEECCEEEEEEE
Q 027900 121 GRTPWEIKEGENEYTMRFDMP-G--MTKQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 121 ~~ppvDI~Et~d~y~V~~dLP-G--v~keDV~V~Ved~~L~I~Ge 162 (217)
..+.+.++.+.+++.|++.|| | ++++||.|.+..+.|.|+..
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 356799999999999999999 7 89999999999999999864
No 17
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=95.08 E-value=0.044 Score=43.26 Aligned_cols=42 Identities=10% Similarity=0.075 Sum_probs=38.7
Q ss_pred CcceeEEec-CCEEEEEEecCCCCCCCeEEEEECCEEEEEEEe
Q 027900 122 RTPWEIKEG-ENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQK 163 (217)
Q Consensus 122 ~ppvDI~Et-~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~ 163 (217)
.+..|++.+ .+.+.|.+.++|+.+++|+|.+..+.|+|+...
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~ 61 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQT 61 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECB
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEc
Confidence 456999999 999999999999999999999999999998753
No 18
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=94.88 E-value=0.074 Score=40.82 Aligned_cols=42 Identities=14% Similarity=0.217 Sum_probs=38.5
Q ss_pred CCcceeEEecCCEEEEEEecC-CC-CCCCeEEEEECCEEEEEEE
Q 027900 121 GRTPWEIKEGENEYTMRFDMP-GM-TKQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 121 ~~ppvDI~Et~d~y~V~~dLP-Gv-~keDV~V~Ved~~L~I~Ge 162 (217)
..+.+.++.+.+++.|++.|| |+ +++||+|.+..+.|.|+..
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 356799999999999999999 88 9999999999999999875
No 19
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=94.77 E-value=0.029 Score=51.07 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=31.3
Q ss_pred cceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEE
Q 027900 123 TPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKA 161 (217)
Q Consensus 123 ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~G 161 (217)
.|+.|... .|.+++.|||++|++|++.-.++.|+|+.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~ 334 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA 334 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE
Confidence 35665444 79999999999999999999999999964
No 20
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=94.70 E-value=0.077 Score=41.19 Aligned_cols=39 Identities=18% Similarity=0.318 Sum_probs=34.4
Q ss_pred cceeEEecCCEEEEEEecC-CCCCCCeEEEEECCEEEEEE
Q 027900 123 TPWEIKEGENEYTMRFDMP-GMTKQDVKVWVEEKMLVVKA 161 (217)
Q Consensus 123 ppvDI~Et~d~y~V~~dLP-Gv~keDV~V~Ved~~L~I~G 161 (217)
+.+.++.+.+++.|++.|| |++++||.|.+..+.|.|..
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 5589999999999999996 99999999999999999976
No 21
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=93.87 E-value=0.12 Score=41.58 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=37.4
Q ss_pred CcceeEEecCCEEEEEEecC-CCCCCCeEEEEECCEEEEEEE
Q 027900 122 RTPWEIKEGENEYTMRFDMP-GMTKQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 122 ~ppvDI~Et~d~y~V~~dLP-Gv~keDV~V~Ved~~L~I~Ge 162 (217)
.+.+.++.+.+++.|++.|| |++++||.|.+..+.|.|+..
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 45699999999999999998 999999999999999999753
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=93.87 E-value=0.16 Score=39.00 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=35.2
Q ss_pred ceeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEe
Q 027900 124 PWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQK 163 (217)
Q Consensus 124 pvDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~ 163 (217)
.++++.+.+.+.|++.+|+. ++++|.++.+.|++++..
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~ 42 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLG 42 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEe
Confidence 59999999999999999996 799999999999999874
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=93.66 E-value=0.25 Score=37.87 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=37.7
Q ss_pred CCCcceeEEecCCEEEEEEecC-C--CCCCCeEEEEECCEEEEEEE
Q 027900 120 RGRTPWEIKEGENEYTMRFDMP-G--MTKQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 120 ~~~ppvDI~Et~d~y~V~~dLP-G--v~keDV~V~Ved~~L~I~Ge 162 (217)
...+.+.+..+.+++.|++.|| | ++++||.|.+..+.|.|...
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 3456799999999999999999 4 89999999999999998653
No 24
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=89.88 E-value=0.24 Score=39.63 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=35.0
Q ss_pred cceeEEecCCEEEEEEecCCCCCCCeEEEEE-CCEEEEEEE
Q 027900 123 TPWEIKEGENEYTMRFDMPGMTKQDVKVWVE-EKMLVVKAQ 162 (217)
Q Consensus 123 ppvDI~Et~d~y~V~~dLPGv~keDV~V~Ve-d~~L~I~Ge 162 (217)
|.++++.+.+.++|++.+||+ ++++|.++ .+.|++++.
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~ 43 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL 43 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE
Confidence 569999999999999999998 58999999 799999987
No 25
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=87.99 E-value=0.17 Score=39.52 Aligned_cols=39 Identities=8% Similarity=0.101 Sum_probs=31.2
Q ss_pred cceeEEecCCE-------EEEEEecCCCCCCCeEEEEECCEEEEEEEe
Q 027900 123 TPWEIKEGENE-------YTMRFDMPGMTKQDVKVWVEEKMLVVKAQK 163 (217)
Q Consensus 123 ppvDI~Et~d~-------y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~ 163 (217)
|.++++.+.+. +.|++.+|++. +++|.++.+.|.|++..
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~ 52 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQS 52 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEE
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEec
Confidence 55888888877 99999999984 99999999999998765
No 26
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=83.19 E-value=3.9 Score=29.77 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=26.5
Q ss_pred EEecC-CCCCCCeEEEEECCEEEEEEEeccC
Q 027900 137 RFDMP-GMTKQDVKVWVEEKMLVVKAQKVPK 166 (217)
Q Consensus 137 ~~dLP-Gv~keDV~V~Ved~~L~I~Ge~~~~ 166 (217)
.+.|| +++.+.|+-.+++++|+|+-.+.+.
T Consensus 66 ~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 66 ELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 67899 7999999999999999999987543
No 27
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=76.14 E-value=12 Score=28.89 Aligned_cols=41 Identities=10% Similarity=0.291 Sum_probs=36.2
Q ss_pred CcceeEEecCCEEEEEEecCCCC--CCCeEEEEECCEEEEEEE
Q 027900 122 RTPWEIKEGENEYTMRFDMPGMT--KQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 122 ~ppvDI~Et~d~y~V~~dLPGv~--keDV~V~Ved~~L~I~Ge 162 (217)
.|...|..+++.++|.+-+|-+. ..++++.|+++.+.....
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~ 59 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS 59 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC
Confidence 35589999999999999999987 889999999998887664
No 28
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=72.00 E-value=6.2 Score=29.08 Aligned_cols=33 Identities=18% Similarity=0.518 Sum_probs=29.5
Q ss_pred EEEEEecC-CCCCCCeEEEE-ECCEEEEEEEeccC
Q 027900 134 YTMRFDMP-GMTKQDVKVWV-EEKMLVVKAQKVPK 166 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~V-ed~~L~I~Ge~~~~ 166 (217)
|.=++.|| +++.+.|+-++ .+++|+|+.-+.+.
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEccCc
Confidence 77778999 89999999999 89999999998654
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=70.71 E-value=6.6 Score=27.72 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=28.3
Q ss_pred CEEEEEEecC-CCCCCCeEEEEE-CCEEEEEEEe
Q 027900 132 NEYTMRFDMP-GMTKQDVKVWVE-EKMLVVKAQK 163 (217)
Q Consensus 132 d~y~V~~dLP-Gv~keDV~V~Ve-d~~L~I~Ge~ 163 (217)
..|.=++.|| +++.+.|+-++. +++|+|+.-+
T Consensus 50 ~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK 83 (85)
T 3q9p_A 50 RCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPM 83 (85)
T ss_dssp EEEEEEEECCTTCCGGGCEEEECTTSEEEEEEEC
T ss_pred EEEEEEEECCCCcChHHcEEEECCCCEEEEEEEc
Confidence 3677889999 899999999998 9999999765
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=70.69 E-value=8.1 Score=27.63 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=28.0
Q ss_pred EEEEEEecC-CCCCCCeEEEEECCEEEEEEEec
Q 027900 133 EYTMRFDMP-GMTKQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 133 ~y~V~~dLP-Gv~keDV~V~Ved~~L~I~Ge~~ 164 (217)
.|.-.+.|| +++.+.|+-++++++|+|+--+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCCEEEEEEecC
Confidence 566678999 59999999999999999998764
No 31
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=70.02 E-value=6.2 Score=28.77 Aligned_cols=33 Identities=21% Similarity=0.444 Sum_probs=29.2
Q ss_pred EEEEEecC-CCCCCCeEEEE-ECCEEEEEEEeccC
Q 027900 134 YTMRFDMP-GMTKQDVKVWV-EEKMLVVKAQKVPK 166 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~V-ed~~L~I~Ge~~~~ 166 (217)
|.=++.|| +++.+.|+-.+ .+++|+|+..+.+.
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~~ 90 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQATPASA 90 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEECBCCC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEECCCc
Confidence 77789999 89999999999 89999999887543
No 32
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=69.97 E-value=4.2 Score=32.19 Aligned_cols=40 Identities=10% Similarity=0.300 Sum_probs=35.5
Q ss_pred cceeEEecCCEEEEEEecCCCC--CCCeEEEEECCEEEEEEE
Q 027900 123 TPWEIKEGENEYTMRFDMPGMT--KQDVKVWVEEKMLVVKAQ 162 (217)
Q Consensus 123 ppvDI~Et~d~y~V~~dLPGv~--keDV~V~Ved~~L~I~Ge 162 (217)
|...|..+++.++|.+-+|.+. ..+++|.|++..+.....
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~ 45 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS 45 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC
Confidence 4578999999999999999999 899999999998877654
No 33
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=66.44 E-value=5.6 Score=28.31 Aligned_cols=32 Identities=9% Similarity=0.349 Sum_probs=27.4
Q ss_pred EEEEEecC-CCCCCCeEEEE-ECCEEEEEEEecc
Q 027900 134 YTMRFDMP-GMTKQDVKVWV-EEKMLVVKAQKVP 165 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~V-ed~~L~I~Ge~~~ 165 (217)
|.=.+.|| +++.+.|+-.+ .+++|+|+..+.+
T Consensus 51 f~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~ 84 (90)
T 2y1y_A 51 FHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQ 84 (90)
T ss_dssp EEEEEECCTTBCGGGCEEEECTTSEEEEEECBC-
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEcCC
Confidence 66678899 89999999999 8999999987644
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=65.55 E-value=9.1 Score=30.08 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=27.1
Q ss_pred EEEEEecC-CCCCCCeEEEEECCEEEEEEEecc
Q 027900 134 YTMRFDMP-GMTKQDVKVWVEEKMLVVKAQKVP 165 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~Ved~~L~I~Ge~~~ 165 (217)
|.=.+.|| +++.+.|+-++++++|+|+--+.+
T Consensus 119 f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~ 151 (161)
T 4eld_A 119 IYRTIKLPATVKEENASAKFENGVLSVILPKAE 151 (161)
T ss_dssp EEEEEECSSCBCGGGCEEEEETTEEEEEEEBCG
T ss_pred EEEEEECCCCcccccEEEEEECCEEEEEEEcCC
Confidence 33457899 799999999999999999998754
No 35
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=59.34 E-value=10 Score=30.70 Aligned_cols=32 Identities=9% Similarity=0.351 Sum_probs=27.3
Q ss_pred EEEEEecC-CCCCCCeEEEE-ECCEEEEEEEecc
Q 027900 134 YTMRFDMP-GMTKQDVKVWV-EEKMLVVKAQKVP 165 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~V-ed~~L~I~Ge~~~ 165 (217)
|.=++.|| +++.+.|+-++ ++++|+|+.-+.+
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTSCEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCCCEEEEEEECCC
Confidence 55667899 89999999999 7999999998754
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=54.78 E-value=14 Score=27.54 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=26.8
Q ss_pred EEEEEEecC-CCCCCCe-EEEEECCEEEEEEEec
Q 027900 133 EYTMRFDMP-GMTKQDV-KVWVEEKMLVVKAQKV 164 (217)
Q Consensus 133 ~y~V~~dLP-Gv~keDV-~V~Ved~~L~I~Ge~~ 164 (217)
.|.=.+.|| +++.+.| +-...+++|+|+-.+.
T Consensus 82 ~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~ 115 (123)
T 3aab_A 82 YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIA 115 (123)
T ss_dssp EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGG
T ss_pred EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcC
Confidence 455567788 7899999 9999999999998764
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=54.60 E-value=19 Score=28.03 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=27.4
Q ss_pred EEEEEecC-CCCCCCeEEEEECCEEEEEEEecc
Q 027900 134 YTMRFDMP-GMTKQDVKVWVEEKMLVVKAQKVP 165 (217)
Q Consensus 134 y~V~~dLP-Gv~keDV~V~Ved~~L~I~Ge~~~ 165 (217)
|.=.+.|| +++.+.|+-.+++++|+|+-.+..
T Consensus 106 F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 106 FVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp EEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred EEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 45567898 799999999999999999998754
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=48.34 E-value=14 Score=27.46 Aligned_cols=20 Identities=15% Similarity=0.373 Sum_probs=17.1
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|+|+++.|+|+|.+-
T Consensus 20 P~gV~V~i~~~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCc
Confidence 47889999999999999653
No 39
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=32.83 E-value=36 Score=28.25 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=28.1
Q ss_pred eeEEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEe
Q 027900 125 WEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQK 163 (217)
Q Consensus 125 vDI~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~ 163 (217)
+.+...++.+.|+++-+-=-.+.|++.|++++|+|+-+.
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~ 72 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKS 72 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECB
T ss_pred EEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcC
Confidence 444455446666666655456799999999999998765
No 40
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=31.90 E-value=28 Score=26.61 Aligned_cols=26 Identities=0% Similarity=-0.061 Sum_probs=22.7
Q ss_pred cCCCCCCCeEEEEECCEEEEEEEecc
Q 027900 140 MPGMTKQDVKVWVEEKMLVVKAQKVP 165 (217)
Q Consensus 140 LPGv~keDV~V~Ved~~L~I~Ge~~~ 165 (217)
-|.+.+-.|.|.++++.+|++|+-..
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESC
T ss_pred CCcccceeEEEEEECCEEEEEEECCC
Confidence 47788889999999999999999753
No 41
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=30.94 E-value=1.7e+02 Score=22.06 Aligned_cols=42 Identities=21% Similarity=0.412 Sum_probs=30.5
Q ss_pred cceeEEecC------CEEEEEEecCCCCCC-----CeEEEEE---CCEEEEEEEec
Q 027900 123 TPWEIKEGE------NEYTMRFDMPGMTKQ-----DVKVWVE---EKMLVVKAQKV 164 (217)
Q Consensus 123 ppvDI~Et~------d~y~V~~dLPGv~ke-----DV~V~Ve---d~~L~I~Ge~~ 164 (217)
..+.|+|.+ +.++-++.+.|+.+. .|+|.++ ++.|.|++...
T Consensus 64 v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~ 119 (135)
T 1q5l_A 64 VTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 119 (135)
T ss_dssp CEEEEEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEET
T ss_pred EEEEEEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEEC
Confidence 447888863 577888999888641 4666654 78999999754
No 42
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=30.38 E-value=26 Score=24.68 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.6
Q ss_pred CCCCCeEEEEECCEEEEEEEecc
Q 027900 143 MTKQDVKVWVEEKMLVVKAQKVP 165 (217)
Q Consensus 143 v~keDV~V~Ved~~L~I~Ge~~~ 165 (217)
++.+.|.|....+.|+|+|+.-.
T Consensus 18 Fd~e~i~L~T~~G~L~IkG~~L~ 40 (71)
T 2ks0_A 18 FDPKEILLETIQGVLSIKGEKLG 40 (71)
T ss_dssp ECSSEEEEEETTEEEEEEEECCC
T ss_pred ECCCEEEEEeCceEEEEEcCCcE
Confidence 46788999999999999999743
No 43
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=29.72 E-value=64 Score=23.29 Aligned_cols=34 Identities=12% Similarity=0.280 Sum_probs=29.8
Q ss_pred CCEEEEEEecCC-CCCCCeEEEEECCEEEEEEEec
Q 027900 131 ENEYTMRFDMPG-MTKQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 131 ~d~y~V~~dLPG-v~keDV~V~Ved~~L~I~Ge~~ 164 (217)
+..|.+.++|+| +++++....+.++.|.|.=.+.
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 568999999996 6899999999999999987764
No 44
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=29.52 E-value=1.4e+02 Score=22.65 Aligned_cols=41 Identities=32% Similarity=0.426 Sum_probs=29.4
Q ss_pred cceeEEecC------CEEEEEEecCCCCC---C--CeEEEEE---CCEEEEEEEe
Q 027900 123 TPWEIKEGE------NEYTMRFDMPGMTK---Q--DVKVWVE---EKMLVVKAQK 163 (217)
Q Consensus 123 ppvDI~Et~------d~y~V~~dLPGv~k---e--DV~V~Ve---d~~L~I~Ge~ 163 (217)
..+.|++.+ +.++-++.|.|+.+ . .|+|.+. ++.|.|++..
T Consensus 47 v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d 101 (152)
T 2op6_A 47 VSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAED 101 (152)
T ss_dssp EEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCCcEEEEEEEE
Confidence 447888864 67788888888764 1 3555554 7899999974
No 45
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=27.56 E-value=39 Score=22.67 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=16.9
Q ss_pred CCCeEEEEECCEEEEEEEe
Q 027900 145 KQDVKVWVEEKMLVVKAQK 163 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~ 163 (217)
-.||.|..+++++++.|.-
T Consensus 32 yndinvtwdgdtvtvegql 50 (62)
T 2gjh_A 32 YNDINVTWDGDTVTVEGQL 50 (62)
T ss_dssp CCSCEEEECSSCEEEEEEC
T ss_pred cccceeEEcCCEEEEEeEE
Confidence 4689999999999999986
No 46
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=24.46 E-value=1.2e+02 Score=25.94 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=28.1
Q ss_pred CCCCeEEEEECCEEEEEEEeccCccccccccccCCCCCCCCCCCCCcE-EEEeeeeeEEEEEECCCC
Q 027900 144 TKQDVKVWVEEKMLVVKAQKVPKNKKKESQVNSNNNNGNGEADEEEGD-WSAKSYGRYSSRIALPEN 209 (217)
Q Consensus 144 ~keDV~V~Ved~~L~I~Ge~~~~~~~k~e~v~~~~~~g~~e~e~~~~~-~~Er~~G~F~R~i~LPe~ 209 (217)
.++.|.| +++.|+|++.+... .... .....||.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G~L~L~~~k~ts---------------------a~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQGSLTIWLDSTSG---------------------SGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETTEEEEEECSSCC---------------------EEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECCEEEEEEecCCC---------------------CEEEECceEeeEEEEEEEEeCCC
Confidence 3556655 78889999764211 1111 134679999999999964
No 47
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=24.16 E-value=54 Score=26.68 Aligned_cols=20 Identities=30% Similarity=0.252 Sum_probs=16.6
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|+++++.++|+|.+-
T Consensus 11 P~gV~V~i~~~~VtVkGpkG 30 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKG 30 (177)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCe
Confidence 47888999999999998653
No 48
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=24.03 E-value=42 Score=27.63 Aligned_cols=38 Identities=11% Similarity=0.116 Sum_probs=25.2
Q ss_pred EEecCCEEEEEEecCCCCCCCeEEEEECCEEEEEEEec
Q 027900 127 IKEGENEYTMRFDMPGMTKQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 127 I~Et~d~y~V~~dLPGv~keDV~V~Ved~~L~I~Ge~~ 164 (217)
+...++.+.|+++-|-=--+.|++.|++++|.|+-+..
T Consensus 30 l~qgd~~~~V~i~~~~nl~~~v~~~v~~g~L~I~~~~~ 67 (241)
T 3lyc_A 30 YTQSDAPEGLEIKTDRNIFEKYEFNVENHKLKIRPKKE 67 (241)
T ss_dssp EEECSSCCEEEEEEEHHHHTTEEEEEETTEEEEEECGG
T ss_pred EEECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 33333455666665543347899999999999987653
No 49
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=24.02 E-value=54 Score=26.97 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=17.6
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|++.++.++|+|.+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG 32 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGPLG 32 (188)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCcEEEEeCCEEEEEcCCe
Confidence 68999999999999998764
No 50
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=23.87 E-value=55 Score=26.74 Aligned_cols=20 Identities=15% Similarity=0.141 Sum_probs=16.8
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|+++++.++|+|.+-
T Consensus 9 P~gV~v~i~~~~vtVkGpkG 28 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG 28 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCe
Confidence 47889999999999998653
No 51
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=23.58 E-value=55 Score=26.96 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=17.0
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|+++++.++|+|.+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG 32 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPRG 32 (191)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCcEEEEeCCEEEEEcCCe
Confidence 58899999999999998764
No 52
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=23.46 E-value=2.4e+02 Score=21.70 Aligned_cols=42 Identities=21% Similarity=0.390 Sum_probs=30.3
Q ss_pred cceeEEec------CCEEEEEEecCCCCCC-----CeEEEEE---CCEEEEEEEec
Q 027900 123 TPWEIKEG------ENEYTMRFDMPGMTKQ-----DVKVWVE---EKMLVVKAQKV 164 (217)
Q Consensus 123 ppvDI~Et------~d~y~V~~dLPGv~ke-----DV~V~Ve---d~~L~I~Ge~~ 164 (217)
..+.||+. ++.++=+|.|.|+.+. .|+|.+. ++.|.|++...
T Consensus 47 v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~ 102 (152)
T 3h0x_A 47 VMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDK 102 (152)
T ss_dssp EEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEET
T ss_pred eeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEc
Confidence 34778885 4577888999888642 3666654 78999999864
No 53
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=23.39 E-value=56 Score=26.90 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=17.0
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|++.++.++|+|.+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG 32 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPRG 32 (190)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCc
Confidence 57899999999999998763
No 54
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=22.75 E-value=48 Score=27.04 Aligned_cols=20 Identities=30% Similarity=0.179 Sum_probs=16.3
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|++++++++|+|.+-
T Consensus 12 P~gV~v~i~~~~v~VkGpkG 31 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG 31 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC
T ss_pred CCCcEEEEeCCEEEEEeCCc
Confidence 57888889999999988763
No 55
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.76 E-value=63 Score=26.59 Aligned_cols=21 Identities=14% Similarity=0.346 Sum_probs=17.4
Q ss_pred CCCCeEEEEECCEEEEEEEec
Q 027900 144 TKQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 144 ~keDV~V~Ved~~L~I~Ge~~ 164 (217)
=|+.|+|++.++.++|+|.+.
T Consensus 12 IP~gV~V~i~~~~VtVkGpkG 32 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGPRG 32 (192)
T ss_dssp CCTTCEEEEETTEEEEEETTE
T ss_pred cCCCCEEEEeCCEEEEECCCe
Confidence 368899999999999998653
No 56
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=20.38 E-value=49 Score=25.22 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=17.5
Q ss_pred CCeEEEEECCEEEEEEEecc
Q 027900 146 QDVKVWVEEKMLVVKAQKVP 165 (217)
Q Consensus 146 eDV~V~Ved~~L~I~Ge~~~ 165 (217)
..++|+|+++.++|+|+-..
T Consensus 77 ~~i~V~V~~g~VtLsG~v~s 96 (132)
T 2kgs_A 77 PDFGLKVERDTVTLTGTAPS 96 (132)
T ss_dssp TTCEEEEEETEEEEECEESS
T ss_pred CceEEEEECCEEEEEEEECC
Confidence 38899999999999999753
No 57
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.16 E-value=47 Score=27.20 Aligned_cols=20 Identities=35% Similarity=0.257 Sum_probs=16.9
Q ss_pred CCCeEEEEECCEEEEEEEec
Q 027900 145 KQDVKVWVEEKMLVVKAQKV 164 (217)
Q Consensus 145 keDV~V~Ved~~L~I~Ge~~ 164 (217)
|+.|+|+++++.++|+|.+.
T Consensus 14 P~gV~v~i~~~~V~VkGpkG 33 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKG 33 (184)
T ss_dssp CSSCEEEESSSEEEEECSSC
T ss_pred CCCcEEEEeCCEEEEEcCCe
Confidence 47889999999999998764
Done!