BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027901
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 41/114 (35%), Gaps = 16/114 (14%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCI---------IPDC 90
C K C G C+ + F CECE GW + ND PC+ +P
Sbjct: 1328 CHKKVCAHGMCQP--SSQSGFTCECEEGWMGPLCDQRTND----PCLGNKCVHGTCLPIN 1381
Query: 91 TLHYDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
Y SC +F PC I C G CR + + CEC GF
Sbjct: 1382 AFSY-SCKCLEGHGGVLCDEEEDLFNPCQMIKCKHGKCRLSGVGQPYCECNSGF 1434
>sp|Q9Z191|EYA4_MOUSE Eyes absent homolog 4 OS=Mus musculus GN=Eya4 PE=2 SV=2
Length = 616
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 103 PDPDKVPHNI----SVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLLNTSYFPCFSN 158
P P + P++ S F P S IY + N++N+ + + P + Y +S
Sbjct: 206 PQPGQTPYSYQMPGSSFAPSSTIYANN-SVSNSTNFSSSQQDYPSYTAFGQNQYAQYYSA 264
Query: 159 CTLGADCEKLGIRSSDSQKTSSNNETISRDDENQAISFQPGKF 201
T GA ++ + TSS+ T + Q ++ QPG+F
Sbjct: 265 STYGAYM----TSNNTADGTSSSTSTYQLQESLQGLTSQPGEF 303
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 28/98 (28%)
Query: 32 LSPFFDKM----CEKVDCGKGKCRADMTHPFNFRCECEPGWK-------------KTKDN 74
++ + DK+ C + G+C D + C C+PGW+ +KDN
Sbjct: 740 IAHYLDKIVKEGCPGLCNSNGRCTLDQN---GWHCVCQPGWRGAGCDVAMETLCTDSKDN 796
Query: 75 DEDNDHSFLPCIIPDCTLHYDSCHTAP----PPDPDKV 108
+ D + C+ PDC L SC P PDP +
Sbjct: 797 EGD---GLIDCMDPDCCLQ-SSCQNQPYCRGLPDPQDI 830
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 37.0 bits (84), Expect = 0.092, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 24/86 (27%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWK-------------KTKDNDEDNDHSFLPCI 86
C + G+C D + C C+PGW+ +KDN+ D + C+
Sbjct: 743 CPGLCNSNGRCTLDQN---GWHCVCQPGWRGAGCDVAMETLCTDSKDNEGD---GLIDCM 796
Query: 87 IPDCTLHYDSCHTAP----PPDPDKV 108
PDC L SC P PDP +
Sbjct: 797 DPDCCLQ-SSCQNQPYCRGLPDPQDI 821
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 37.0 bits (84), Expect = 0.093, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 21/94 (22%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWKKT----------KDNDEDNDHSFLPCIIPD 89
C + G+C D + C C+PGW+ D + + C+ PD
Sbjct: 633 CPGLCNSNGRCTLDQN---GWHCVCQPGWRGAGCDVAMETLCADGKDSEGDGLVDCMDPD 689
Query: 90 CTLHYDSCHTAP----PPDPDKVPHNISVFEPCS 119
C L SC T P PDP + IS +P S
Sbjct: 690 CCLQ-SSCQTQPFCRGSPDPFDI---ISQNQPAS 719
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 41/114 (35%), Gaps = 16/114 (14%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCI---------IPDC 90
C K C G C+ + F CEC+ GW + ND PC+ +P
Sbjct: 1336 CHKKVCAHGTCQP--SSQAGFTCECQEGWMGPLCDQRTND----PCLGNKCVHGTCLPIN 1389
Query: 91 TLHYDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
Y SC +F PC I C G CR + + CEC G+
Sbjct: 1390 AFSY-SCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECSSGY 1442
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 104 DPDKVPHNISVF---EPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLL--NTSYFPCFSN 158
D KVP + EPC C GTC+ +S TCEC+ G+ L + PC N
Sbjct: 1319 DFQKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGFTCECQEGWMGPLCDQRTNDPCLGN 1378
Query: 159 CTLGADCEKLGIRSSDSQKTSSNNETISRDDEN-----QAISFQPGK 200
+ C + S + + + ++E+ QAI + GK
Sbjct: 1379 KCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGK 1425
>sp|Q5IJ48|CRUM2_HUMAN Protein crumbs homolog 2 OS=Homo sapiens GN=CRB2 PE=1 SV=2
Length = 1285
Score = 35.4 bits (80), Expect = 0.26, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 26/85 (30%), Gaps = 38/85 (44%)
Query: 60 FRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHTAPPPDPDKVPHNISVFEPCS 119
F C C PGW+ P C H D CH+AP
Sbjct: 1078 FACACGPGWEG-----------------PRCEAHVDPCHSAP------------------ 1102
Query: 120 WIYCGEGTCRNTSNYKHTCECKPGF 144
C G C + + C C PGF
Sbjct: 1103 ---CARGRCHTHPDGRFECRCPPGF 1124
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2
Length = 2731
Score = 33.9 bits (76), Expect = 0.84, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 38 KMCEKVDCGKGKCRADMTHPF--NFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLH 93
K CE+VDC C H F + C C+ GWK D D L C +PDC+ H
Sbjct: 603 KFCEEVDCPHPNCSG---HGFCADGTCICKKGWKGPDCATMDQDA--LQC-LPDCSGH 654
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 10/115 (8%)
Query: 40 CEKVDCGKGKCRADMT-HPFNFRCECEPGWKKTK-DNDEDNDHSFLPCIIPDCT----LH 93
C K+ C G C+ + T P C CE GW D D C+ C L
Sbjct: 1339 CRKLYCLHGICQPNATPGPV---CHCEAGWGGLHCDQPVDGPCHGHKCVHGKCVPLDALA 1395
Query: 94 YDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLL 148
Y SC +V EPC + C G C+ ++ C C PGF+ L
Sbjct: 1396 Y-SCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATRGAHCVCSPGFSGEL 1449
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 10/115 (8%)
Query: 40 CEKVDCGKGKCRADMT-HPFNFRCECEPGWKKTK-DNDEDNDHSFLPCIIPDCT----LH 93
C K+ C G C+ + T P C CE GW D D C+ C L
Sbjct: 1339 CRKLYCLHGICQPNATPGPV---CHCEAGWGGLHCDQPVDGPCHGHKCVHGKCVPLDALA 1395
Query: 94 YDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLL 148
Y SC +V EPC + C G C+ ++ C C PGF+ L
Sbjct: 1396 Y-SCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATKGAHCVCSPGFSGEL 1449
>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1
Length = 2871
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 45 CGKGKCRADMTHPFNFRCECEPGWKKTKDND--EDNDHSFLPCIIPDCTLHYDSCHTAPP 102
CG G+C + P +RCEC+ G+ + D ED D LP I + +CH P
Sbjct: 1415 CGNGQC---LNAPGGYRCECDMGFVPSADGKACEDIDECSLPNICV-----FGTCHNLPG 1466
Query: 103 P---------DPDKVPHNISVFEPC-SWIYCGEGTCRNTSNYKHTCECKPGFNNLLNTSY 152
+ D+ N + C C G C NT +TC+C P F LN +
Sbjct: 1467 LFRCECEIGYELDRSGGNCTDVNECLDPTTCISGNCVNTPG-SYTCDCSPDFE--LNPTR 1523
Query: 153 FPCFSNCTLGADCEKLGIR-SSDSQKTSSNNE 183
C T +C L IR D+ T+ +NE
Sbjct: 1524 VGCVD--TRSGNC-YLNIRPRGDNGDTACSNE 1552
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 59 NFRCECEPGWKKTKDN--DEDNDHSFLPCI------IPDCTLHYDSCHTAPPPDPDKVPH 110
++RC+C+PG++ T ++ N+ +P I I Y CHT + D+
Sbjct: 1830 SYRCDCKPGYRLTSTGQCNDRNECQEIPNICSHGQCIDTVGSFYCLCHTGFKTNEDQT-M 1888
Query: 111 NISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
+ + E C CG GTCRNT C C GF
Sbjct: 1889 CLDINE-CERDACGNGTCRNTIG-SFNCRCNHGF 1920
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 59 NFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHTAPPPDPDKVPHNI------ 112
F C+C G+ K + N+ C IP H +C P + P
Sbjct: 165 QFSCKCLTGFTGQKCETDVNE-----CDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCD 219
Query: 113 SVFEPCSWIYC-GEGTCRNTSNYKHTCECKPGF 144
S++ PC+ C GTCR T ++ C C PGF
Sbjct: 220 SLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGF 252
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
Query: 40 CEKVDC-GKGKCRADMTHPFNFRCECEPGW 68
CE DC G+G+C D RC C PGW
Sbjct: 505 CEVADCNGRGRCDTDG------RCRCNPGW 528
>sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=3
Length = 1375
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 19/104 (18%)
Query: 57 PFNFRCECEPGWKKTKDND------------EDNDHSFLPCIIPDCTLHYD---SCHTAP 101
P ++RCEC G++ D ED H+ P C H SC P
Sbjct: 822 PGSYRCECRSGYEFADDRHTCILITPPANPCEDGSHTCAPAGQARCVHHGGSTFSCACLP 881
Query: 102 PPDPDKVPHNISVFEPCSWIYCG-EGTCRNTSNYKHTCECKPGF 144
D H + + CS C TC NT +C C+PG+
Sbjct: 882 GYAGDG--HQCTDVDECSENRCHPAATCYNTPG-SFSCRCQPGY 922
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 40 CEKVDCGKGKCRADMT-HPFNFRCECEPGWKKTK-DNDEDNDHSFLPCIIPDCT----LH 93
C K+ C G C+ + T P C CE GW D D C+ C L
Sbjct: 1342 CRKLYCLHGICQPNATPGPM---CHCEAGWVGLHCDQPADGPCHGHKCVHGQCVPLDALS 1398
Query: 94 YDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLL 148
Y SC ++ EPC + C G C+ + C C PGF+ L
Sbjct: 1399 Y-SCQCQDGYSGALCNQAGALAEPCRGLQCLHGHCQASGTKGAHCVCDPGFSGEL 1452
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 109 PHNISVFEPCSWIYC-GEGTCRNTSNYKHTCECKPGF 144
PH +++PC C GTC TS+ HTC C PGF
Sbjct: 212 PHCQRLYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGF 248
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Query: 44 DCGKGKCRADMT---HPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHTA 100
+C C+ D T F C C PG++ +D + PC+ C +S H
Sbjct: 454 ECKSNPCQNDATCLDQIGGFHCICMPGYEGVFCQINSDDCASQPCLNGKCIDKINSFHCE 513
Query: 101 PPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNL 147
P + V E C+ C G K+TCEC PGF+ +
Sbjct: 514 CPKGFSGSLCQVDVDE-CASTPCKNGAKCTDGPNKYTCECTPGFSGI 559
>sp|Q8JZM4|DNER_MOUSE Delta and Notch-like epidermal growth factor-related receptor
OS=Mus musculus GN=Dner PE=1 SV=1
Length = 737
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 29 APALSPFFDKMCEKVDCGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIP 88
P + D C C G CR+ T +++C C+PG+ +E N+ PC+
Sbjct: 462 GPTCAQLVD-FCALSPCAHGMCRSVGT---SYKCLCDPGYHGLYCEEEYNECLSAPCLNA 517
Query: 89 DCTLHYDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNN 146
+ + K H +PC+ I C G ++ TC C PGF
Sbjct: 518 ATCRDLINGYECVCLAEYKGTHCELYKDPCANISCLNGGTCDSEGLNGTCICAPGFTG 575
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWK----------KTKDNDEDNDHSFLPCIIPD 89
C + G G+C +++C C+ GW+ DN ++ + C++PD
Sbjct: 838 CPDLCNGNGRCTLGQN---SWQCVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLVPD 894
Query: 90 CTLH 93
C L
Sbjct: 895 CCLQ 898
>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1
Length = 2871
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 45 CGKGKCRADMTHPFNFRCECEPGWKKTKDND--EDNDHSFLPCIIPDCTLHYDSCHTAPP 102
CG G+C + P +RCEC+ G+ + D ED D LP I + +CH P
Sbjct: 1415 CGNGQC---LNAPGGYRCECDMGFVPSADGKACEDIDECSLPNICV-----FGTCHNLPG 1466
Query: 103 P---------DPDKVPHNISVFEPC-SWIYCGEGTCRNTSNYKHTCECKPGFNNLLNTSY 152
+ D+ N + C C G C NT +TC+C P F LN +
Sbjct: 1467 LFRCECEIGYELDRSGGNCTDVNECLDPTTCISGNCVNTPG-SYTCDCPPDFE--LNPTR 1523
Query: 153 FPCFSNCTLGADCEKLGIR-SSDSQKTSSNNE 183
C T +C L IR D+ T+ +NE
Sbjct: 1524 VGCVD--TRSGNC-YLDIRPRGDNGDTACSNE 1552
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 59 NFRCECEPGWK--KTKDNDEDNDHSFLPCI------IPDCTLHYDSCHTAPPPDPDKVPH 110
++RC+C+PG++ T ++ N+ +P I I Y CHT + D+
Sbjct: 1830 SYRCDCKPGYRFTSTGQCNDRNECQEIPNICSHGQCIDTVGSFYCLCHTGFKTNADQT-M 1888
Query: 111 NISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
+ + E C CG GTCRNT C C GF
Sbjct: 1889 CLDINE-CERDACGNGTCRNTIG-SFNCRCNHGF 1920
>sp|Q8NFT8|DNER_HUMAN Delta and Notch-like epidermal growth factor-related receptor
OS=Homo sapiens GN=DNER PE=1 SV=1
Length = 737
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 29 APALSPFFDKMCEKVDCGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIP 88
P + D C C G CR+ T +++C C+PG+ +E N+ PC+
Sbjct: 462 GPTCAQLID-FCALSPCAHGTCRSVGT---SYKCLCDPGYHGLYCEEEYNECLSAPCLNA 517
Query: 89 DCTLHYDSCHTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNN 146
+ + K H +PC+ + C G ++ TC C PGF
Sbjct: 518 ATCRDLVNGYECVCLAEYKGTHCELYKDPCANVSCLNGATCDSDGLNGTCICAPGFTG 575
>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=3
Length = 1231
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 40 CEKVDCGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHT 99
C CG K ++D N C C+P + + ++DN + L+ DS ++
Sbjct: 1092 CGNKQCGCRKQKSDC----NVSCSCDPTKCRNRHQNQDNSDAI--------ELNQDSENS 1139
Query: 100 APPPDPDKVPHNISVFEP 117
DP +V +S F P
Sbjct: 1140 FKLEDPTEVTSGLSFFHP 1157
>sp|P14585|LIN12_CAEEL Protein lin-12 OS=Caenorhabditis elegans GN=lin-12 PE=1 SV=1
Length = 1429
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 40 CEKVDCGK-------GKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTL 92
CEK+DC G C F C+CEPG++ + N+ C+ + L
Sbjct: 322 CEKMDCSAIPDICNHGTCIDSPLSEKAFECQCEPGYEGILCEQDKNE-----CLSENMCL 376
Query: 93 HYDSCHTAPPP---DPDKVPHNISVFEP---CSWIYC-GEGTCRNTSNYKHTCECKPGF 144
+ +C P D + EP C +C +GTC +TS++ C+CK GF
Sbjct: 377 NNGTCVNLPGSFRCDCARGFGGKWCDEPLNMCQDFHCENDGTCMHTSDHSPVCQCKNGF 435
>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1
Length = 2871
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 59 NFRCECEPGWK--KTKDNDEDNDHSFLPCI------IPDCTLHYDSCHTAPPPDPDKVPH 110
++RC+C+PG++ T ++ N+ +P I I Y CHT + D+
Sbjct: 1830 SYRCDCKPGYRFTSTGQCNDRNECQEIPNICSHGQCIDTVGSFYCLCHTGFKTNADQT-M 1888
Query: 111 NISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
+ + E C CG GTCRNT C C GF
Sbjct: 1889 CLDINE-CERDACGNGTCRNTIG-SFNCRCNHGF 1920
>sp|Q8N2S1|LTBP4_HUMAN Latent-transforming growth factor beta-binding protein 4 OS=Homo
sapiens GN=LTBP4 PE=1 SV=2
Length = 1624
Score = 31.6 bits (70), Expect = 4.4, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 40/102 (39%)
Query: 45 CGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHTAPPPD 104
CG+G C+ P +FRC C G++ + C D C PPP
Sbjct: 682 CGRGACK---NLPGSFRCVCPAGFRGSA-----------------CEEDVDECAQEPPP- 720
Query: 105 PDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNN 146
CG G C NT+ H C C GF +
Sbjct: 721 ------------------CGPGRCDNTAGSFH-CACPAGFRS 743
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus
GN=Notch2 PE=1 SV=1
Length = 2471
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 59 NFRCECEPGWKKTKDNDEDNDHSFLPCIIPDCTLHYDSCHTAPPPDPDKVP------HNI 112
F C C G K + + N+ C IP H +C P + P H
Sbjct: 165 QFSCRCPAGITGQKCDADINE-----CDIPGRCQHGGTCLNLPGSYRCQCPQRFTGQHCD 219
Query: 113 SVFEPCSWIYC-GEGTCRNTSNYKHTCECKPGF 144
S + PC+ C GTCR T ++ C C PGF
Sbjct: 220 SPYVPCAPSPCVNGGTCRQTGDFTSECHCLPGF 252
>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3
Length = 2871
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 59 NFRCECEPGWK--KTKDNDEDNDHSFLPCI------IPDCTLHYDSCHTAPPPDPDKVPH 110
++RC+C+PG++ T ++ N+ +P I I Y CHT + D+
Sbjct: 1830 SYRCDCKPGYRFTSTGQCNDRNECQEIPNICSHGQCIDTVGSFYCLCHTGFKTNDDQT-M 1888
Query: 111 NISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGF 144
+ + E C CG GTCRNT C C GF
Sbjct: 1889 CLDINE-CERDACGNGTCRNTIG-SFNCRCNHGF 1920
>sp|Q9W6F9|WIF1_DANRE Wnt inhibitory factor 1 OS=Danio rerio GN=wif1 PE=2 SV=1
Length = 378
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 107 KVPHNISVFEPCSWIYCGEGTCRNTS--NYKHTCECKPGFNNLLNTSYFPCFSNCTLGAD 164
+ PHN F+ C C G CRN N + CEC+ GF + C C G
Sbjct: 164 RTPHNAIFFKTCQRAKC-PGGCRNGGYCNERQVCECQDGFYGVHCEKAL-CSPRCLNGGL 221
Query: 165 CEKLGI 170
C G+
Sbjct: 222 CMSPGV 227
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 13/121 (10%)
Query: 45 CGKGKCRADMTHPFNFRCECEPGWKKTKDNDEDNDHSFLPCIIPDC-------TLHYDSC 97
C G CR+ + CEC PGW + E D PC+ C T C
Sbjct: 1338 CKHGLCRS--VEKDSVVCECRPGWTGPLCDQEARD----PCLGHRCHHGKCVATGTSYMC 1391
Query: 98 HTAPPPDPDKVPHNISVFEPCSWIYCGEGTCRNTSNYKHTCECKPGFNNLLNTSYFPCFS 157
A D + CS C G C + + C C+PGF+ PC
Sbjct: 1392 KCAEGYGGDLCDNKNDSANACSAFKCHHGQCHISDQGEPYCLCQPGFSGEHCQQENPCLG 1451
Query: 158 N 158
Sbjct: 1452 Q 1452
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,575,555
Number of Sequences: 539616
Number of extensions: 3952430
Number of successful extensions: 9428
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 8642
Number of HSP's gapped (non-prelim): 799
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)