Your job contains 1 sequence.
>027909
MEQNLFEPETGYATEEDASLKQKWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLY
GRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFH
NPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSL
LVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLLF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027909
(217 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6R567 - symbol:RMA1H1 "E3 ubiquitin-protein li... 255 7.0e-22 1
TAIR|locus:2124004 - symbol:RMA3 "RING membrane-anchor 3"... 216 9.5e-18 1
TAIR|locus:2128746 - symbol:RMA1 "RING membrane-anchor 1"... 110 5.7e-12 2
TAIR|locus:2123663 - symbol:RMA2 "RING membrane-anchor 2"... 112 2.7e-10 2
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 103 1.0e-05 1
TAIR|locus:2016437 - symbol:AT1G19310 species:3702 "Arabi... 106 1.4e-05 2
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 90 0.00035 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 89 0.00046 1
TAIR|locus:2049023 - symbol:AT2G23780 species:3702 "Arabi... 95 0.00054 2
DICTYBASE|DDB_G0285333 - symbol:DDB_G0285333 "RING finger... 105 0.00078 1
>UNIPROTKB|Q6R567 [details] [associations]
symbol:RMA1H1 "E3 ubiquitin-protein ligase RMA1H1"
species:4072 "Capsicum annuum" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0009611
GO:GO:0043161 GO:GO:0009723 GO:GO:0005789 GO:GO:0046872
GO:GO:0009409 GO:GO:0009414 GO:GO:0008270 GO:GO:0006970
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 EMBL:AY513612 ProteinModelPortal:Q6R567
Uniprot:Q6R567
Length = 252
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 63/170 (37%), Positives = 88/170 (51%)
Query: 35 EKDDEQQQNCPVCKANISVASLVPLYGRGGISSA-SDSKKPNLGEVVPSRPHPSALNXXX 93
E D+QQ CPVCKA +S +L+PLYGRGG S+ S+ K PNLG V+P RP PS
Sbjct: 77 ENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRP-PSPRCGGH 135
Query: 94 XXXXXXXRHQTQQLHSDFFQSQAPAFHNPQYFPXXXXXXXXXXXXXXXXMATISFFNPLM 153
+ +Q L +Q Q+ P Y M S
Sbjct: 136 FLLPTTDSNPSQLLQRRGYQQQSQT-RQPAYQGSYMSSPMLSPGGATANMLQHS------ 188
Query: 154 GMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRV 202
M+G + RIFG S+T+++TYP S +L +S++PR+RRQ + D+SL R+
Sbjct: 189 -MIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRI 237
>TAIR|locus:2124004 [details] [associations]
symbol:RMA3 "RING membrane-anchor 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 EMBL:AL161571
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 EMBL:AL078467 HOGENOM:HOG000238304
KO:K10666 EMBL:DQ059124 EMBL:BT002429 EMBL:BT006285 IPI:IPI00519289
PIR:T08939 RefSeq:NP_194477.2 UniGene:At.43903
ProteinModelPortal:Q8GUK7 SMR:Q8GUK7 PaxDb:Q8GUK7 PRIDE:Q8GUK7
EnsemblPlants:AT4G27470.1 GeneID:828856 KEGG:ath:AT4G27470
TAIR:At4g27470 eggNOG:NOG290580 InParanoid:Q8GUK7 OMA:FLCCIIL
PhylomeDB:Q8GUK7 ProtClustDB:CLSN2918206 Genevestigator:Q8GUK7
Uniprot:Q8GUK7
Length = 243
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 57/148 (38%), Positives = 76/148 (51%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD--SKKPN-LGEVVPSRPHPSALNXXXX 94
D+ Q NCPVCK+NI++ SLVPLYGRG S +S SKK + L +P RP PSAL
Sbjct: 82 DQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPIT 141
Query: 95 XXXXXXRHQTQQLHSDFFQSQAPAFHNPQYFPXXXXXXXXXXXXXXXXMATISFFNPLMG 154
+ + Q H Q+ +P+FHN QY P M SF P++G
Sbjct: 142 SASSL--NPSLQ-H----QTLSPSFHNHQYSPRGFTTTESTDLANAVMM---SFLYPVIG 191
Query: 155 MLGGMTLERIFGGSTTSLFT-YPSQSLL 181
M G + RIFG T ++ Y SQ ++
Sbjct: 192 MFGDLVYTRIFGTFTNTIAQPYQSQRMM 219
Score = 105 (42.0 bits), Expect = 0.00056, P = 0.00056
Identities = 31/91 (34%), Positives = 43/91 (47%)
Query: 113 QSQAPAFHNPQYFPXXXXXXXXXXXXXXXXMATISFFNPLMGMLGGMTLERIFGGSTTSL 172
Q+ +P+FHN QY P M SF P++GM G + RIFG T ++
Sbjct: 153 QTLSPSFHNHQYSPRGFTTTESTDLANAVMM---SFLYPVIGMFGDLVYTRIFGTFTNTI 209
Query: 173 FTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
P QS ++ M+ +KSLNRVS
Sbjct: 210 -AQPYQS----------QRMMQREKSLNRVS 229
>TAIR|locus:2128746 [details] [associations]
symbol:RMA1 "RING membrane-anchor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0032527
"protein exit from endoplasmic reticulum" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0032940 "secretion by cell"
evidence=IGI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032940 GO:GO:0016020
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907
HSSP:P38398 EMBL:AF071527 EMBL:AL161497 GO:GO:0032527 EMBL:AB008518
EMBL:BT003833 EMBL:BT005188 IPI:IPI00517108 PIR:T52142
RefSeq:NP_192260.1 RefSeq:NP_974506.1 UniGene:At.239
ProteinModelPortal:O64425 SMR:O64425 IntAct:O64425 STRING:O64425
PRIDE:O64425 EnsemblPlants:AT4G03510.1 EnsemblPlants:AT4G03510.2
GeneID:825654 KEGG:ath:AT4G03510 TAIR:At4g03510 eggNOG:NOG283810
HOGENOM:HOG000238304 InParanoid:O64425 KO:K10666 OMA:CKSKVSH
PhylomeDB:O64425 ProtClustDB:CLSN2685946 Genevestigator:O64425
Uniprot:O64425
Length = 249
Score = 110 (43.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 109 SDFFQSQAPAFHNPQ--YFPXXXXXXXXXXXXXXXXMATISFFNPLMGMLGGMTLERIFG 166
+D SQ F++PQ Y+P ++ + +P+M M+G M R+FG
Sbjct: 145 TDLRLSQRVHFNSPQEGYYPVSGVMSSNS-------LSYSAVLDPVMVMVGEMVATRLFG 197
Query: 167 GSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRV 202
F YP + +L ++ PR+RR+ M+ DKSL R+
Sbjct: 198 TRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRI 234
Score = 100 (40.3 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP
Sbjct: 85 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRP 128
>TAIR|locus:2123663 [details] [associations]
symbol:RMA2 "RING membrane-anchor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161572
GO:GO:0004842 InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666
EMBL:U81598 EMBL:BT003053 EMBL:AK227310 IPI:IPI00535055 PIR:T09043
RefSeq:NP_194556.1 UniGene:At.32032 HSSP:P15919
ProteinModelPortal:P93030 SMR:P93030 IntAct:P93030 STRING:P93030
EnsemblPlants:AT4G28270.1 GeneID:828942 KEGG:ath:AT4G28270
TAIR:At4g28270 eggNOG:KOG0823 InParanoid:P93030 OMA:GESSSNM
PhylomeDB:P93030 ProtClustDB:PLN03208 Genevestigator:P93030
Uniprot:P93030
Length = 193
Score = 112 (44.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 23 KWSPTS--APTNVPEKDDEQQQ-NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV 79
KW+ S + V + D +++ CPVCK+++S A+LVP+YGRG K P G
Sbjct: 47 KWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRG-------QKAPQSGSN 99
Query: 80 VPSRP 84
VPSRP
Sbjct: 100 VPSRP 104
Score = 74 (31.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 150 NPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRV 202
+P+MG++ M R+FG S++++ Y N R RR+ M+ ++SL+RV
Sbjct: 132 DPVMGVVCEMVYRRLFGESSSNMAPYRDM------NVRSRRRAMQAEESLSRV 178
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 103 (41.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/75 (38%), Positives = 35/75 (46%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNXXXXXXXXX 99
+ +CPVCKA + +LVPLYG G SS SK N G VP+RP +A
Sbjct: 52 KSNHCPVCKALVKEDTLVPLYGMGKPSSDPRSKL-NSGVTVPNRP--AATRTETARPRLE 108
Query: 100 XRHQTQQL---HSDF 111
RH HS F
Sbjct: 109 QRHHGSSFFGGHSSF 123
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q ++CPVCKA I LVPLYGRG SSA K G VP+RP
Sbjct: 56 QSKDCPVCKAVIEEDRLVPLYGRGK-SSADPRSKSIPGLEVPNRP 99
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 157 GGMTLERIFGGSTTSLF 173
G +TL FGG SLF
Sbjct: 139 GNVTLSAAFGGLIPSLF 155
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 90 (36.7 bits), Expect = 0.00035, P = 0.00035
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 89 (36.4 bits), Expect = 0.00046, P = 0.00046
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 86
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 38 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 82
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 95 (38.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + SK+ P L +P+RP
Sbjct: 63 QECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLR--IPNRP 104
Score = 42 (19.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 144 ATISFFNPLMGMLGG----MTLERI------FGGSTTSLFTY 175
A +FFN +G++GG M R FGG SLF +
Sbjct: 120 AASNFFNYGIGLMGGIMPMMATTRFGNFSMGFGGLLPSLFNF 161
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 105 (42.0 bits), Expect = 0.00078, P = 0.00078
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA I+ L+P+YGRGG S D +K + + +P RP
Sbjct: 107 QQCPVCKAPITKEKLIPIYGRGG--SGEDPRKKS--QSIPQRP 145
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 177 0.00084 109 3 11 23 0.47 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 589 (63 KB)
Total size of DFA: 151 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.48u 0.12s 17.60t Elapsed: 00:00:01
Total cpu time: 17.48u 0.12s 17.60t Elapsed: 00:00:01
Start: Thu May 9 16:40:39 2013 End: Thu May 9 16:40:40 2013