BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027909
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449446936|ref|XP_004141226.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Cucumis sativus]
Length = 261
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 142/262 (54%), Gaps = 46/262 (17%)
Query: 1 MEQNLFEPETGYATEEDASLKQKWSPTSAPTNVPE------------------------- 35
MEQN PE +E+D SLKQ W S + + E
Sbjct: 1 MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60
Query: 36 -----------------KDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGE 78
+ E QNCPVCKA+I+ +SLVPLYGRG +S S+SKK +LG
Sbjct: 61 LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
Query: 79 VVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHH-YGSHAALAS 137
VP RP PS +NT S+S+ST + +Q+LHS++ +S + ++ QYFP YG+ A+ +
Sbjct: 121 AVPRRPPPS-MNTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSP 179
Query: 138 SSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNP--RIRRQEMEL 195
S LG S NP +GM G RIFG +L Y + +S N R+RRQEM+L
Sbjct: 180 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQL 239
Query: 196 DKSLNRVSLFLFCCLVLCLLLF 217
DKSLNRVS+FLFCC ++CLLLF
Sbjct: 240 DKSLNRVSIFLFCCFIICLLLF 261
>gi|449531287|ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Cucumis sativus]
Length = 261
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 141/262 (53%), Gaps = 46/262 (17%)
Query: 1 MEQNLFEPETGYATEEDASLKQKWSPTSAPTNVPE------------------------- 35
MEQN PE +E+D SLKQ W S + + E
Sbjct: 1 MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60
Query: 36 -----------------KDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGE 78
+ E QNCPVCKA+I+ +SLVPLYGRG +S S+SKK +LG
Sbjct: 61 LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
Query: 79 VVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHH-YGSHAALAS 137
VP RP PS +NT S+S+S + +Q+LHS++ +S + ++ QYFP YG+ A+ +
Sbjct: 121 AVPRRPPPS-MNTPSHSNSSSALYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSP 179
Query: 138 SSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNP--RIRRQEMEL 195
S LG S NP +GM G RIFG +L Y + +S N R+RRQEM+L
Sbjct: 180 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQL 239
Query: 196 DKSLNRVSLFLFCCLVLCLLLF 217
DKSLNRVS+FLFCC ++CLLLF
Sbjct: 240 DKSLNRVSIFLFCCFIICLLLF 261
>gi|225461411|ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
Length = 253
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSST 98
EQQQNCPVCKANIS SLVPLYGRG S S++KK ++G +P RP ++T +T++++
Sbjct: 83 EQQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRPPAHGVHTLITTTTS 142
Query: 99 ST--RHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGML 156
++ H ++ LH + FQS + QYFPH YG +AA + + S NP +GM
Sbjct: 143 ASLNSHPSRHLHPNPFQSHS------QYFPHPYGGYAATPTLT-------SVLNPTIGMF 189
Query: 157 GGMTLERIFGGSTTSLFTYP---SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLC 213
G M R+FG S TSLF YP + L+ S NPR+RRQEM+LD+ LNRVS+FLFCC +LC
Sbjct: 190 GEMVFSRMFGSSDTSLFAYPYPNTYPLMASANPRMRRQEMQLDRCLNRVSIFLFCCFILC 249
Query: 214 LLLF 217
LL F
Sbjct: 250 LLSF 253
>gi|255573345|ref|XP_002527599.1| rnf5, putative [Ricinus communis]
gi|223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis]
Length = 265
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 140/256 (54%), Gaps = 58/256 (22%)
Query: 1 MEQNLFEPETGYATEEDASLKQKWSPTSAPTNVPEKDDE--------------------- 39
ME FE + + EED ++KQKW SA T + E DD+
Sbjct: 1 MEPRFFEHDMHFDAEEDLTVKQKWKSVSAATGLSEDDDDCFSCNICLDSANDPVVTLCGH 60
Query: 40 ------------------------QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPN 75
QQ +CPVCKANIS S+VPLYGRG S S++KK +
Sbjct: 61 LYCWPCIYKWLQVKRTSSDVDEQQQQPSCPVCKANISSNSMVPLYGRGTSQSNSETKKGS 120
Query: 76 LGEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPA----FHNPQYFPHHYGS 131
+ +P RP P A+NTS+T++S +QQLH +FFQS + + FH+ +YF YG
Sbjct: 121 VDAAIPRRP-PPAMNTSITNTS----QLSQQLHPNFFQSHSQSQPQSFHHQRYFTDRYGG 175
Query: 132 HAALASSSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYP---SQSLLVS-NNPR 187
+ ALAS++LG A F+P++GM G + R FG S TSLF Y S SL+ S N+PR
Sbjct: 176 YGALASTNLGAAAMTQIFSPMIGMFGELIFSRTFGTSNTSLFAYSYPNSNSLMGSYNSPR 235
Query: 188 IRRQEMELDKSLNRVS 203
+RRQEM+L++SLNRV+
Sbjct: 236 MRRQEMQLEQSLNRVT 251
>gi|224128161|ref|XP_002329096.1| predicted protein [Populus trichocarpa]
gi|222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 113/171 (66%), Gaps = 5/171 (2%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSST 98
+QQ +CPVCKA+IS SLVPLYGRG +S S SKK V+P RP PS LNT +
Sbjct: 62 QQQPSCPVCKADISPNSLVPLYGRGPSTSESKSKKDPADVVIPRRPLPSELNTV----NA 117
Query: 99 STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGG 158
+T Q +QLHS+FF Q +F + QYF +G +AAL SS+LGG F NP++GM
Sbjct: 118 NTSPQNRQLHSNFFNPQPQSFQHQQYFHDPHGGYAALTSSNLGGTVMTGFLNPMLGMFNE 177
Query: 159 MTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFC 208
M R FG S T++F P + L+ SN+PR+RRQE++LDKSLNRVS+F C
Sbjct: 178 MVFTRNFGTSITNMFARPYTNPLMGSNSPRMRRQEVQLDKSLNRVSIFFLC 228
>gi|224114956|ref|XP_002316902.1| predicted protein [Populus trichocarpa]
gi|222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 121/189 (64%), Gaps = 12/189 (6%)
Query: 23 KW--SPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVV 80
KW TS+P V +QQ +CPVCKA IS SLVPLYGRG SS S S ++ +
Sbjct: 49 KWLHVKTSSPDAV-----QQQPSCPVCKAAISPTSLVPLYGRGPPSSESKSMGSSVDAAL 103
Query: 81 PSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSL 140
P RP PS LNT S +T Q++Q HS+ F Q+ +F + QYF +G +AA+ SS+L
Sbjct: 104 PRRPLPSGLNTV----SPNTSRQSRQPHSNSFNPQSQSFQHQQYFHDPHGGYAAMTSSNL 159
Query: 141 GGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSL 199
FFNP+MGM M RIFG S T++F +P + L+ SNNPR+RRQEM+LDKSL
Sbjct: 160 RSTVMTGFFNPMMGMFNEMGCSRIFGTSVTNMFAHPYTNPLMGSNNPRMRRQEMQLDKSL 219
Query: 200 NRVSLFLFC 208
NRVS+FLFC
Sbjct: 220 NRVSIFLFC 228
>gi|388507976|gb|AFK42054.1| unknown [Lotus japonicus]
Length = 248
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 108/167 (64%), Gaps = 5/167 (2%)
Query: 37 DDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSS 96
+ +QQQ CP+CKA IS SLVPLYGRG +S S+SKK +G +P RP P LN +TS+
Sbjct: 73 EPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSN 132
Query: 97 STSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGML 156
S H +QL+ +F SQ+ H Q++ YG+H A LGG A SFFNP++GM
Sbjct: 133 RASNPHLGEQLYPSYFHSQSQPLHYQQHY--LYGTHGANGLPYLGGTAMTSFFNPVIGMF 190
Query: 157 GGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
G M L RIFG S +LF YP S +PR+RRQEM++DKSLNRVS
Sbjct: 191 GEMVLTRIFGVSDANLFPYPHSG---SGSPRMRRQEMQIDKSLNRVS 234
>gi|328929994|gb|AEB69786.1| MAKIBISHI 1 [Medicago truncatula]
Length = 250
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 119/236 (50%), Gaps = 45/236 (19%)
Query: 10 TGYATEEDASLKQKWSPTSAPTNVPEKDD------------------------------- 38
T + + ++ SLKQKW T+ T + ++
Sbjct: 4 TCFGSNDEVSLKQKWKSTTEDTTISSGENNCFDCNICLESANDPVVTLCGHLYCWPCIYK 63
Query: 39 -----------EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPS 87
+ Q CPVCKA IS SLVPLYGRG +S ++S K +G +P RP P
Sbjct: 64 WLNVQSSSVEPDTQPTCPVCKAVISHTSLVPLYGRGKSNSETESNKLQVGLGIPHRPPPY 123
Query: 88 ALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATIS 147
LN +TS+ S QQLH ++FQSQ+ H Y PH YG H A LGG A S
Sbjct: 124 NLNALLTSNRPSNLRHEQQLHPNYFQSQSRPIHYQHYIPHLYGGHGANGLHYLGGAAMTS 183
Query: 148 FFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
F NP+MG+ G M R+FG S +LF YP S +PR+RRQEM++DKSLNRVS
Sbjct: 184 FVNPVMGLFGEMVSTRMFGVSDANLFAYPRNG---STSPRMRRQEMQIDKSLNRVS 236
>gi|358249238|ref|NP_001240271.1| uncharacterized protein LOC100817526 [Glycine max]
gi|255640217|gb|ACU20399.1| unknown [Glycine max]
Length = 246
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 7/166 (4%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
QQQ CPVCK+ IS S+VPLYG G +S S++KK + +P R P +LN +TS +
Sbjct: 76 QQQTCPVCKSEISHTSVVPLYGCGTSNSESNAKKLQMSLGIPHRQPPCSLNAMLTSPRSR 135
Query: 100 TRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGM 159
H +QQLH +FQ+Q+ FH Q+ YGS+ LGG + SFFN ++ M G M
Sbjct: 136 ISHPSQQLHPSYFQTQSRPFHYQQF----YGSYGTNGLPYLGGASMTSFFNTVIDMFGEM 191
Query: 160 TLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLF 205
L RIFG S +LF P L S + R+RRQEM++DKSLNR+S+F
Sbjct: 192 VLTRIFGISDANLFANP---LNGSGSSRMRRQEMQIDKSLNRLSIF 234
>gi|302143025|emb|CBI20320.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 94/182 (51%), Gaps = 59/182 (32%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSST 98
EQQQNCPVCKANIS SLVPLYGRG S S++KK ++G +P RP
Sbjct: 183 EQQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRP-------------- 228
Query: 99 STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGG 158
PA +G H L NP +GM G
Sbjct: 229 ------------------PA----------HGVHTVL--------------NPTIGMFGE 246
Query: 159 MTLERIFGGSTTSLFTYP---SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLL 215
M R+FG S TSLF YP + L+ S NPR+RRQEM+LD+ LNRVS+FLFCC +LCLL
Sbjct: 247 MVFSRMFGSSDTSLFAYPYPNTYPLMASANPRMRRQEMQLDRCLNRVSIFLFCCFILCLL 306
Query: 216 LF 217
F
Sbjct: 307 SF 308
>gi|75291821|sp|Q6R567.1|RMA1_CAPAN RecName: Full=E3 ubiquitin-protein ligase RMA1H1; AltName:
Full=Protein RING membrane-anchor 1 homolog 1
gi|41059804|gb|AAR99376.1| ring domain containing protein [Capsicum annuum]
Length = 252
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 35 EKDDEQQQNCPVCKANISVASLVPLYGRGGISSA-SDSKKPNLGEVVPSRPHPSALNTSV 93
E D+QQ CPVCKA +S +L+PLYGRGG S+ S+ K PNLG V+P RP PS
Sbjct: 77 ENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRP-PSPRCGGH 135
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
T+ + +Q L +Q Q+ P + GS+ + S GG AT +
Sbjct: 136 FLLPTTDSNPSQLLQRRGYQQQSQTRQ-----PAYQGSYMSSPMLSPGG-ATANMLQ--H 187
Query: 154 GMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVL 212
M+G + RIFG S+T+++TYP S +L +S++PR+RRQ + D+SL R+ FLFCC V
Sbjct: 188 SMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVT 247
Query: 213 CLLLF 217
CL+LF
Sbjct: 248 CLILF 252
>gi|224121892|ref|XP_002330679.1| predicted protein [Populus trichocarpa]
gi|222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 36 KDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP--HPSALNTSV 93
+D QQ CPVCKA +S +++VPL+GRG + K PNLG ++P RP ++
Sbjct: 85 QDQHPQQQCPVCKAEVSQSTIVPLFGRGQTTKPCKGKAPNLGIIIPRRPPGRACGFDSPR 144
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
+ +TS+ T Q+H + P H Q++ GS++ S GG +T++ +
Sbjct: 145 SPIATSSPRVTPQIH---HRHNYP--HQSQHYYSQPGSNSTSPMRSPGG-STLNMPALEV 198
Query: 154 GMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVL 212
GM G M R+FG S T++ +YP S L S +PR+RR M+ D+SL+R+ FLFCC+ L
Sbjct: 199 GMFGEMMYSRVFGNSITNIHSYPNSYHLAGSASPRVRRHVMQADRSLSRICFFLFCCVFL 258
Query: 213 CLLLF 217
C L F
Sbjct: 259 CFLSF 263
>gi|224127182|ref|XP_002329420.1| predicted protein [Populus trichocarpa]
gi|222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA--LNTSVTSSSTSTR 101
CPVCKA +S +++VPL+GRG + S K PN+G ++P RP A ++ T +T +
Sbjct: 93 CPVCKAEVSQSTIVPLFGRGQTTKPSMRKAPNVGIIIPHRPPGLACGFDSPRTPIATGSP 152
Query: 102 HQTQQLHSDFFQSQAPAFHNPQYFPH----HY---GSHAALASSSLGGMATISFFNPLMG 154
QQ+H HN +PH HY GS++A S G TI+ +P++G
Sbjct: 153 RPVQQIHHR---------HN---YPHQSQLHYSQPGSYSASPMHSPRG-TTINMADPVVG 199
Query: 155 MLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLC 213
M G M R+FG S T++ +YP S L S +PR+RR M+ D+SL+R+ FLFCC+ LC
Sbjct: 200 MFGEMIYARVFGNSITNMPSYPNSYHLAGSASPRVRRHVMQADRSLSRICFFLFCCVFLC 259
Query: 214 LLLF 217
L F
Sbjct: 260 FLSF 263
>gi|449444358|ref|XP_004139942.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
Length = 252
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKP-NLGEVVPSRPHPSALNTSVTSSSTSTRH 102
CPVCKA +S A+LVP+YG+ + AS ++ P NLG +P RP + T +S
Sbjct: 88 CPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASP---- 143
Query: 103 QTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGMTLE 162
T QLHSD + Q+ + Y+ + A + S + T + +P++GM G
Sbjct: 144 -TPQLHSDNYSPQSHS-----YYAQTQNEYIASSMLSSSSITT-NIIHPVIGMFGDTIYA 196
Query: 163 RIFGGSTTSLFTYPSQSLLVSNNP-RIRRQEMELDKSLNRVSLFLFCCLVLCLLLF 217
R FG +TT+L+TYP+ V+N+ R+RR M+ D+SL+R+ F FCCLV+CLLLF
Sbjct: 197 RTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 252
>gi|449433845|ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Cucumis sativus]
gi|449479350|ref|XP_004155576.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Cucumis sativus]
Length = 238
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS ++VPLYGRG + + + + + P PSA + +
Sbjct: 66 DEHPQ-CPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILA-- 122
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLG 157
T + HQ Q + + +Q H+P F + Y +A +L + SF +P++GM+G
Sbjct: 123 TPSTHQQQLPYRNPYQRPN---HDPLLFAN-YEEDSASPLLNLARTSFSSFHHPVVGMIG 178
Query: 158 GMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLL 216
R+FG S +L++Y S L S+ R+RRQEM++DKSLNR+S+FLFCC++LC+L+
Sbjct: 179 DFVHARVFGNSD-NLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 237
Query: 217 F 217
F
Sbjct: 238 F 238
>gi|449433843|ref|XP_004134706.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Cucumis sativus]
gi|449479346|ref|XP_004155575.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Cucumis sativus]
Length = 257
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS ++VPLYGRG + + + + + P PSA + +
Sbjct: 85 DEHPQ-CPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILA-- 141
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLG 157
T + HQ Q + + +Q H+P F + Y +A +L + SF +P++GM+G
Sbjct: 142 TPSTHQQQLPYRNPYQRPN---HDPLLFAN-YEEDSASPLLNLARTSFSSFHHPVVGMIG 197
Query: 158 GMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLL 216
R+FG S +L++Y S L S+ R+RRQEM++DKSLNR+S+FLFCC++LC+L+
Sbjct: 198 DFVHARVFGNSD-NLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 256
Query: 217 F 217
F
Sbjct: 257 F 257
>gi|225446337|ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2 [Vitis
vinifera]
gi|225446339|ref|XP_002272107.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1 [Vitis
vinifera]
Length = 260
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 9/170 (5%)
Query: 35 EKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA--LNTS 92
E D++ CPVCKA +S +L+PLYGRG + S++K P+ +P RP A ++
Sbjct: 81 ENPDQKHPQCPVCKAEVSDTTLIPLYGRGQATKPSNAKAPHPDIFIPRRPSGPACGVDAP 140
Query: 93 VTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPL 152
+T ++T+ ++QL+ ++ + +H H S+A S GGM T S ++P+
Sbjct: 141 LTPTTTANPQPSRQLYYRNYRHHSQPYHP------HPSSYAESPILSPGGMTTTSTYHPI 194
Query: 153 MGMLGGMTLERIFGGSTTSLFTYPSQSLLVSN-NPRIRRQEMELDKSLNR 201
MGM G M R+FG S +L+TYP+ L N + R+RR M+ DKSL+R
Sbjct: 195 MGMFGEMVYARVFGNSVQNLYTYPNSYHLAGNTSSRMRRHVMQADKSLSR 244
>gi|225468785|ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 1 [Vitis
vinifera]
gi|359497380|ref|XP_003635497.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 2 [Vitis
vinifera]
gi|359497382|ref|XP_003635498.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 3 [Vitis
vinifera]
gi|147810574|emb|CAN63097.1| hypothetical protein VITISV_013326 [Vitis vinifera]
Length = 240
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 98/173 (56%), Gaps = 19/173 (10%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD--SKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q CPVCKA IS +LVPLYGRG S ++ K G +P P P A T
Sbjct: 68 DEHPQ-CPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIP--PRPPACGTQALI 124
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSL---GGMATISFFNPL 152
++TS H QQL Q + P + N QY PH Y + + SSL GG SFF+P+
Sbjct: 125 NATS--HNGQQL-----QYRNP-YQNQQYDPHPYNDYEHDSPSSLFNMGGSTATSFFHPV 176
Query: 153 MGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
GM G M R+FG S SL+ YP S L S+ PR+RRQEM+ DKSLNR+S+
Sbjct: 177 -GMFGEMVYARVFGNSE-SLYAYPNSYHLTGSSTPRLRRQEMQADKSLNRISI 227
>gi|449438088|ref|XP_004136822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
gi|449479008|ref|XP_004155479.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
Length = 239
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 28/184 (15%)
Query: 35 EKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVT 94
EK + CPVCKA +S A+LVPLYG+G +SK P LG VVP RP A S
Sbjct: 83 EKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESKNPQLGIVVPRRPQGPACFESPR 142
Query: 95 SSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMG 154
+S T H P F G+ + S++ ++ + G
Sbjct: 143 PTSHPTSHTV-----------GPQFRE--------GNSDSADQSNV-------YYAEMTG 176
Query: 155 MLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLC 213
+ G + R+ G+ T+L+ YP S L+ S++PRIRR ++ D+SLNR+ +FLFCCL++C
Sbjct: 177 VFGEVVYARM-SGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIIC 235
Query: 214 LLLF 217
L+LF
Sbjct: 236 LILF 239
>gi|329757897|gb|AEC04825.1| ubiquitin ligase protein [Vitis pseudoreticulata]
Length = 240
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 97/173 (56%), Gaps = 19/173 (10%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD--SKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q CPVCKA IS +LVPLYGRG S ++ K G +P P P A T
Sbjct: 68 DEHPQ-CPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIP--PRPPACGTQALI 124
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSL---GGMATISFFNPL 152
++TS H QQL Q + P + N QY PH Y + + SSL GG SFF+P+
Sbjct: 125 NATS--HNGQQL-----QYRNP-YQNQQYDPHPYNDYEHDSPSSLFNMGGSTATSFFHPV 176
Query: 153 MGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
GM G M R+FG S SL+ YP S L S+ PR+R QEM+ DKSLNR+S+
Sbjct: 177 -GMFGEMVYARVFGNSE-SLYAYPNSYHLTGSSTPRLRTQEMQADKSLNRISI 227
>gi|255556043|ref|XP_002519056.1| rnf5, putative [Ricinus communis]
gi|223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis]
Length = 241
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 26/177 (14%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD--SKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q CPVCKA+IS ++VPLYGRG + ++ K G +P P PSA
Sbjct: 68 DEHPQ-CPVCKADISHTTMVPLYGRGQAPAEAEIEGKASCRGTAIP--PRPSACGAQALI 124
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNP----QYFPHHYGSHAALASS---SLGGMATISF 148
SS +H QQL +HNP Y P Y S + S +LGG A F
Sbjct: 125 SSP--QHTAQQL----------PYHNPYQNHNYTPDPYSSFEEASQSPLLNLGGSAVTGF 172
Query: 149 FNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
+P +GM G M R+FG S SL+ Y S L+ SN+PR+RRQEM+ DKSLNR+S+
Sbjct: 173 HHPFVGMFGEMVYARVFGNSD-SLYAYRNSYHLMGSNSPRLRRQEMQADKSLNRISI 228
>gi|4972072|emb|CAB43879.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|7269601|emb|CAB81397.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 264
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 30/177 (16%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSAS---DSKKPNLGEVVPSRPHPSALNTSVT 94
D+ Q NCPVCK+NI++ SLVPLYGRG S +S K+ L +P RP PSAL +T
Sbjct: 94 DQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPIT 153
Query: 95 SSST---STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNP 151
S+S+ S +HQT +P+FHN QY P + S+ L +SF P
Sbjct: 154 SASSLNPSLQHQT----------LSPSFHNHQYSPRGF---TTTESTDLANAVMMSFLYP 200
Query: 152 LMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFC 208
++GM G + RIFG T ++ P QS ++ M+ +KSLNR +++ C
Sbjct: 201 VIGMFGDLVYTRIFGTFTNTI-AQPYQS----------QRMMQREKSLNRYVMYIGC 246
>gi|15236326|ref|NP_192260.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
gi|42572819|ref|NP_974506.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
gi|75318457|sp|O64425.1|RMA1_ARATH RecName: Full=E3 ubiquitin-protein ligase RMA1; AltName:
Full=Protein RING membrane-anchor 1
gi|3164222|dbj|BAA28598.1| RMA1 [Arabidopsis thaliana]
gi|4206205|gb|AAD11593.1| RMA1 RING zinc finger protein [Arabidopsis thaliana]
gi|7270674|emb|CAB77836.1| RMA1 RING zinc finger protein [Arabidopsis thaliana]
gi|28392896|gb|AAO41884.1| putative E3 ubiquitin ligase, RMA1 [Arabidopsis thaliana]
gi|28827754|gb|AAO50721.1| putative E3 ubiquitin ligase, RMA1 [Arabidopsis thaliana]
gi|332656931|gb|AEE82331.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
gi|332656932|gb|AEE82332.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
Length = 249
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 21/183 (11%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 85 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPN 139
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGM 155
S ++ +D SQ F++PQ +Y ++S+SL A + +P+M M
Sbjct: 140 SPYAS--------TDLRLSQRVHFNSPQ--EGYYPVSGVMSSNSLSYSAVL---DPVMVM 186
Query: 156 LGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCL 214
+G M R+FG F YP + +L ++ PR+RR+ M+ DKSL R+ F CC+VLCL
Sbjct: 187 VGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCL 246
Query: 215 LLF 217
LLF
Sbjct: 247 LLF 249
>gi|30687607|ref|NP_194477.2| E3 ubiquitin-protein ligase RMA3 [Arabidopsis thaliana]
gi|75328843|sp|Q8GUK7.1|RMA3_ARATH RecName: Full=E3 ubiquitin-protein ligase RMA3; AltName:
Full=Protein RING membrane-anchor 3
gi|27311647|gb|AAO00789.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|30023720|gb|AAP13393.1| At4g27470 [Arabidopsis thaliana]
gi|66865952|gb|AAY57610.1| RING finger family protein [Arabidopsis thaliana]
gi|332659946|gb|AEE85346.1| E3 ubiquitin-protein ligase RMA3 [Arabidopsis thaliana]
Length = 243
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 93/172 (54%), Gaps = 30/172 (17%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSAS---DSKKPNLGEVVPSRPHPSALNTSVT 94
D+ Q NCPVCK+NI++ SLVPLYGRG S +S K+ L +P RP PSAL +T
Sbjct: 82 DQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPIT 141
Query: 95 SSST---STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNP 151
S+S+ S +HQT +P+FHN QY P + S+ L +SF P
Sbjct: 142 SASSLNPSLQHQT----------LSPSFHNHQYSPRGF---TTTESTDLANAVMMSFLYP 188
Query: 152 LMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
++GM G + RIFG T ++ P QS ++ M+ +KSLNRVS
Sbjct: 189 VIGMFGDLVYTRIFGTFTNTI-AQPYQS----------QRMMQREKSLNRVS 229
>gi|297809777|ref|XP_002872772.1| hypothetical protein ARALYDRAFT_911843 [Arabidopsis lyrata subsp.
lyrata]
gi|297318609|gb|EFH49031.1| hypothetical protein ARALYDRAFT_911843 [Arabidopsis lyrata subsp.
lyrata]
Length = 246
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 21/183 (11%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K N+G P RP + +
Sbjct: 82 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGK--NIG---PKRPVGPVYRFEMPN 136
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGM 155
S S+ +D SQ F++PQ +Y ++S+SL A + +P+M M
Sbjct: 137 SPYSS--------TDLRLSQRVHFNSPQ--EGYYPVSGVMSSNSLSYSAVL---DPVMVM 183
Query: 156 LGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCL 214
+G M R+FG F YP + +L ++ PR+R + M+ DKSL R+ F CC+VLCL
Sbjct: 184 VGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRWRIMQADKSLGRIFFFFMCCVVLCL 243
Query: 215 LLF 217
LLF
Sbjct: 244 LLF 246
>gi|297803354|ref|XP_002869561.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297315397|gb|EFH45820.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 243
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 30/172 (17%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSAS--DSKKPNLGEV-VPSRPHPSALNTSVT 94
D+ NCPVCK+NI++ SLVPLYGRG S +S SKK + +P RP PS LN+ +T
Sbjct: 82 DQHHNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDAQSTDIPRRPAPSTLNSPIT 141
Query: 95 SSST---STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNP 151
S+S+ S +HQT +P+FHN QY P + S+ L +SF P
Sbjct: 142 SASSLNPSLQHQT----------LSPSFHNHQYSPRGF---TTTESTDLANAVMMSFLYP 188
Query: 152 LMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
++GM G M RIFG T ++ P QS ++ M+ +KSLNRVS
Sbjct: 189 VIGMFGDMVYTRIFGTFTNTI-AQPYQS----------QRMMQREKSLNRVS 229
>gi|255639433|gb|ACU20011.1| unknown [Glycine max]
Length = 249
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 36 KDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
+++E++Q CPVCK+ IS +SLVPLYGRG S K +G V+P RP L+++ S
Sbjct: 82 ENEEEKQQCPVCKSEISQSSLVPLYGRGQTVLPSKGKGHQVGVVIPRRPLGPTLDSATVS 141
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGM 155
S + P ++PQ F GS+ ++ ++ G + + F+ G+
Sbjct: 142 PPI----------SHVYHRHYP--NHPQQFNSIPGSYTSMFNT---GGSLANAFDTTYGV 186
Query: 156 LGGMTLERIFGGSTTSLFTYPSQSLLVSN-NPRIRRQEMELDKSLNRVSLF 205
G M R+FG T+ +TYP+ L N NPRIRR M++D+SLNR++ F
Sbjct: 187 FGEMIYARVFGNQMTNTYTYPNSYDLSRNSNPRIRRHLMQVDRSLNRITFF 237
>gi|356549928|ref|XP_003543342.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
Length = 249
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 36 KDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
+++E++Q CPVCK+ IS +SLVPLYGRG S K +G V+P RP L+++ S
Sbjct: 82 ENEEEKQQCPVCKSEISQSSLVPLYGRGQTVLPSKGKGHQVGVVIPRRPLGPTLDSATVS 141
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGM 155
S + P ++PQ F GS+ ++ ++ G + + F+ G+
Sbjct: 142 PPI----------SHVYHRHYP--NHPQQFNSIPGSYTSMFNT---GGSLANAFDTTYGV 186
Query: 156 LGGMTLERIFGGSTTSLFTYPSQSLLVSN-NPRIRRQEMELDKSLNRVSLF 205
G M R+FG T+ +TYP+ L N NPRIRR M++D+SLNR++ F
Sbjct: 187 FGEMIYARVFGNQMTNTYTYPNSYDLSRNSNPRIRRHLMQVDRSLNRITFF 237
>gi|356543823|ref|XP_003540359.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Glycine max]
gi|356543825|ref|XP_003540360.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Glycine max]
Length = 248
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 22/173 (12%)
Query: 37 DDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS- 95
++E++Q CPVCK+ IS +SLVPLYGRG S K +G V+P RP +L++ S
Sbjct: 82 ENEEKQQCPVCKSEISQSSLVPLYGRGQTELPSKGKGHQVGVVIPRRPLGPSLDSVTVSR 141
Query: 96 --SSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
S RH Q PQ GS+ ++ ++ G + + F+
Sbjct: 142 PISHVYHRHYPNQ---------------PQQLNLIPGSYTSMFNT---GGSLANAFDTTY 183
Query: 154 GMLGGMTLERIFGGSTTSLFTYPSQSLLVSN-NPRIRRQEMELDKSLNRVSLF 205
G+ G M RIFG T+ +TYP+ L N NPRIRR M++D SLNR++ F
Sbjct: 184 GVFGEMIYARIFGNQMTNTYTYPNSYDLSGNSNPRIRRHLMQVDSSLNRITFF 236
>gi|359806926|ref|NP_001241324.1| uncharacterized protein LOC100786373 [Glycine max]
gi|255635730|gb|ACU18214.1| unknown [Glycine max]
Length = 240
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 20/171 (11%)
Query: 37 DDEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH-PSALNTSV 93
DDE+QQ CPVCK+ +S +SLVPLYGRG + S K +G V+P RPH P LNT
Sbjct: 72 DDEEQQRPQCPVCKSEVSQSSLVPLYGRGQTTLPSKGKPRQVGTVIPQRPHGPRTLNTRS 131
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
S S QS P + NP + H+ S + +S + + T +
Sbjct: 132 VSQPIS-------------QSYHP-YSNPYHPQQHFNSIPSGYTSPM--IRTTGSIDNTF 175
Query: 154 GMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVS 203
G+ G M R+FG +++ TY S +L ++NPR+RR M++DKSL+R+S
Sbjct: 176 GIFGEMIYARVFGNHVSNIHTYANSYNLSGTSNPRMRRHLMQVDKSLSRIS 226
>gi|255553769|ref|XP_002517925.1| rnf5, putative [Ricinus communis]
gi|223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis]
Length = 225
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 35 EKDDEQ-QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALN-TS 92
E +D Q Q CPVCKA +S +LVPL+GRG + S SK PNLG ++P RP A S
Sbjct: 86 ENEDLQLHQQCPVCKAEVSEGTLVPLFGRGQTTKPSKSKAPNLGIIIPRRPRGLACGFDS 145
Query: 93 VTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPL 152
S TS+ HQTQ++++ + Q+ +++ P Y L G + F+P+
Sbjct: 146 PRSPFTSSPHQTQEIYNRNYPHQSQLYYSQ---PGSYSGSPMLNPRVTAG----NMFDPV 198
Query: 153 MGMLGGMTLERIFGGSTTSLFTYPS 177
+GM G M R+FG S T+++ YP+
Sbjct: 199 IGMFGEMIYARVFGNSITNIYNYPN 223
>gi|388503238|gb|AFK39685.1| unknown [Medicago truncatula]
Length = 247
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 89/179 (49%), Gaps = 29/179 (16%)
Query: 35 EKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP-HPSALNTSV 93
EK E+ Q CPVCK+ IS +SLVPLYGRG + S +G V+P RP PS +
Sbjct: 78 EKQKEEPQ-CPVCKSEISKSSLVPLYGRGQTTPPSKGNDHQIGSVIPPRPLGPSWMTNLP 136
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSL---GGMATISFFN 150
S + Q HN + + HY +H+ +S + GG S N
Sbjct: 137 RSLDAANVSQ----------------HNSRTYHPHYLNHSQRYASPMLNTGG----SLPN 176
Query: 151 PL---MGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLF 205
PL G+ G M RIFG T+++TYP S +L +NPRIRR M DKSL R+ F
Sbjct: 177 PLDTSYGVFGEMMYARIFGNQVTNIYTYPNSYNLTGISNPRIRRHLMRADKSLGRICFF 235
>gi|449475787|ref|XP_004154551.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
Length = 244
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRPHPSALNTSVTSSSTSTRH 102
CPVCKA +S A+LVP+YG+ + AS ++ PNLG +P RP + T +S
Sbjct: 88 CPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASP---- 143
Query: 103 QTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGMTLE 162
T QLHSD + Q+ + Y+ + A + S + T + +P++GM G
Sbjct: 144 -TPQLHSDNYSPQSHS-----YYAQTQNEYIASSMLSSSSITT-NIIHPVIGMFGDTIYA 196
Query: 163 RIFGGSTTSLFTYPSQSLLVSNNP-RIRRQEMELDKSLNRVSLFLF 207
R FG +TT+L+TYP+ V+N+ R+RR M+ D+SL+R+ F
Sbjct: 197 RTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFSFF 242
>gi|255638201|gb|ACU19414.1| unknown [Glycine max]
Length = 236
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 22/170 (12%)
Query: 37 DDEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH-PSALNTSV 93
D+E+QQ CPVCK+ +S +SLVPLYGRG + S K +G V+P RPH P N
Sbjct: 72 DNEEQQKPQCPVCKSEVSQSSLVPLYGRGQTTIPSKGKPHQVGTVIPQRPHGPRTHNIRS 131
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
S S QS P + NP Y P + S + +S + + T +
Sbjct: 132 VSQPIS-------------QSYHP-YSNP-YHPQQFNSIPSGYTSPM--IRTSGSIDNTF 174
Query: 154 GMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
G+ G M R+FG ++L TY +L ++NPR+RR M++DKSL+R+S
Sbjct: 175 GIFGEMIYARVFGNHVSNLHTY--ANLSGTSNPRMRRHLMQVDKSLSRIS 222
>gi|255637671|gb|ACU19159.1| unknown [Glycine max]
Length = 232
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 20/183 (10%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
KW + + P DE Q CPVCKA+IS +++VPLYGRG ++A + K + +P
Sbjct: 56 KWLHVQSDSLAP---DEHPQ-CPVCKADISNSTMVPLYGRGHAATA-EGKTSSCDVFIPP 110
Query: 83 RPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGG 142
RP S + + +SS +H + + +Q +FH P+ A +LG
Sbjct: 111 RPFASCVQALLATSSQRGQHLP---YRNPYQGHYFSFH-----PYQEEDDATSQMLNLG- 161
Query: 143 MATISFFNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNR 201
S +P+ GM G M R+FG + +L+ YP S L+ S PR+RRQEM+ KSLNR
Sbjct: 162 ----SHHHPVTGMFGEMVYARVFG-NPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNR 216
Query: 202 VSL 204
+S+
Sbjct: 217 ISI 219
>gi|356549335|ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
Length = 232
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS +++VPLYGRG ++ ++ K + +P RP + S +
Sbjct: 68 DEHPQ-CPVCKADISNSTMVPLYGRGHAATTAEGKTASCDVFIPPRP-----SASCAQAL 121
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNP---QYFPHHYGSHAALASSSLGGMATISFFNPLMG 154
+T + Q L + NP YF H A+S + + S +P+ G
Sbjct: 122 LATSQRGQHL----------PYRNPYQGHYFTSHPYQEEDDATSQMLNLG--SHHHPVTG 169
Query: 155 MLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
M G M R+FG + +L+ YP S L+ S PR+RRQEM+ KSLNR+S+
Sbjct: 170 MFGEMVYARVFG-NPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRISI 219
>gi|356555252|ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
Length = 232
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 28/187 (14%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
KW + + P DE Q CPVCKA+IS +++VPLYGRG ++A + K + +P
Sbjct: 56 KWLHVQSDSLAP---DEHPQ-CPVCKADISNSTMVPLYGRGHAATA-EGKTSSCDVFIPP 110
Query: 83 RPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAAL----ASS 138
RP S + + +SS +H + NP Y H++ SH A+S
Sbjct: 111 RPSASCVQALLATSSQRGQHL--------------PYRNP-YQGHYFSSHPYQEEDDATS 155
Query: 139 SLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDK 197
+ + S +P+ GM G M R+FG + +L+ YP S L+ S PR+RRQEM+ K
Sbjct: 156 QMLNLG--SHHHPVTGMFGEMVYARVFG-NPENLYAYPNSYQLMGSATPRLRRQEMQAHK 212
Query: 198 SLNRVSL 204
SLNR+S+
Sbjct: 213 SLNRISI 219
>gi|224077116|ref|XP_002305139.1| predicted protein [Populus trichocarpa]
gi|222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 22/171 (12%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS A++VPLYGRG S+ ++ K P G ++P P PSA S+
Sbjct: 68 DEHPQ-CPVCKADISHATMVPLYGRGQGSTEAEGKAPYRGMIIP--PRPSACGAQGVMSN 124
Query: 98 TSTRHQTQQL-HSDFFQSQAPAFHNPQYFPHHYGSHAALASS---SLGGMATISFFNPLM 153
TS + +Q+L + + +QS HN Y + YGS + S +LG P++
Sbjct: 125 TS--NTSQRLPYRNPYQS-----HN--YNSNPYGSFEEASPSPLLNLGDPTMTGLQEPVV 175
Query: 154 GMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSL 204
GML M R+FG +S L +++PRIRR EM KSLNR+S+
Sbjct: 176 GMLREMVYARVFGAFPSSYH------LTGTSSPRIRRHEMLAAKSLNRISI 220
>gi|22795037|gb|AAN05420.1| putative RING protein [Populus tremula x Populus alba]
Length = 233
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS ++VPLYGRG S+ ++ K P G ++P P PSA S+
Sbjct: 68 DEHPQ-CPVCKADISHTTMVPLYGRGQGSTEAEGKTPYRGMIIP--PRPSACGAQGVVSN 124
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASS---SLGGMATISFFNPLMG 154
TS Q + + N Y + YGS + S +LG A P +G
Sbjct: 125 TSNTGQRLPYRN--------PYRNHNYNANPYGSFEEASPSPLLNLGDPAMTGLQQPAVG 176
Query: 155 MLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
M M R+FG +P S L+ + +PR+RR E+ DKSLNR+S+
Sbjct: 177 MFREMVYARVFG-------PFPNSYHLMGTGSPRLRRHELMADKSLNRISI 220
>gi|242076572|ref|XP_002448222.1| hypothetical protein SORBIDRAFT_06g023430 [Sorghum bicolor]
gi|241939405|gb|EES12550.1| hypothetical protein SORBIDRAFT_06g023430 [Sorghum bicolor]
Length = 260
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
+W + + ++ CPVCKA +S +LVPLYGRGG DSKK +P
Sbjct: 70 EWLRPGVESTASDNSSSARRQCPVCKATLSTDTLVPLYGRGG-----DSKKSPNSIAIPR 124
Query: 83 RP--HPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSL 140
RP H + S+ + +H Q + + Q + Q++P G + +
Sbjct: 125 RPMVHRETVEQQNAQSNANDQHYHQSMEDN---PQHRPLPHAQHYPIPTGLDFIYPPAPV 181
Query: 141 GGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTY--PSQSLLVSNNPRIRRQEMELDKS 198
G S ++G + + L F G + Y P + NPR+RR +MEL++S
Sbjct: 182 GRGLIHSTAGGVLGGMAEVVLPWAFRGQLPASLYYMSPYHVATQNMNPRLRRHQMELERS 241
Query: 199 LNRVSLFLFCCLVLCLLLF 217
L+++ FLF +VLCLLLF
Sbjct: 242 LHQIWFFLFVFVVLCLLLF 260
>gi|357164879|ref|XP_003580198.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Brachypodium
distachyon]
Length = 259
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 87/194 (44%), Gaps = 41/194 (21%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA +S SLVPLYGRGG SKK G +P RP + +
Sbjct: 89 QQCPVCKATLSADSLVPLYGRGG-----SSKKSLDGMAIPRRP--------MVHRENAEH 135
Query: 102 HQTQ-QLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNP--------- 151
H TQ + Q+ P P P + H + G F +P
Sbjct: 136 HHTQSNIDDRHHQNMEP---RPLLRPLRHAHHHS-------GATEFDFIHPPSPLGRGLI 185
Query: 152 ---LMGMLGGM---TLERIFGGSTTSLFTYPSQSLLVSNN--PRIRRQEMELDKSLNRVS 203
G+LGGM L F G Y S + ++N PR+RRQ+ME+++SL+ +
Sbjct: 186 HSTAGGVLGGMAEAVLPSAFRGQLPPSMYYTSPYYIAAHNMGPRLRRQQMEVERSLHHIW 245
Query: 204 LFLFCCLVLCLLLF 217
FLF +VLCLLLF
Sbjct: 246 FFLFVFVVLCLLLF 259
>gi|224125502|ref|XP_002329821.1| predicted protein [Populus trichocarpa]
gi|118484396|gb|ABK94075.1| unknown [Populus trichocarpa]
gi|222870883|gb|EEF08014.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCKA+IS ++VPLYGRG S+ ++ K P G ++P P PSA S+
Sbjct: 68 DEHPQ-CPVCKADISHTTMVPLYGRGQGSTEAEGKTPYRGMIIP--PRPSACGAQGVVSN 124
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASS---SLGGMATISFFNPLMG 154
TS Q + + HN Y + YGS + S +LG P++G
Sbjct: 125 TSNTGQRLPYRNPYRS------HN--YNANPYGSFEEASPSPLLNLGDPTMTGLQQPVVG 176
Query: 155 MLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSL 204
M M R+FG +P S L+ + +PR+RR E+ DKSLNR+S+
Sbjct: 177 MFREMVYARVFG-------PFPNSYHLMGTGSPRLRRHELMADKSLNRISI 220
>gi|356548727|ref|XP_003542751.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Glycine max]
gi|356548729|ref|XP_003542752.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Glycine max]
Length = 237
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 30/190 (15%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRG-GISSASDSKKPN--LGEV 79
KW + + P DE Q CPVCK +I ++VPLYGRG GI+ + K + G
Sbjct: 57 KWLHVQSASLAP---DEHPQ-CPVCKDDICHTTMVPLYGRGQGIAHSDHDGKASSYRGSC 112
Query: 80 VPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSS 139
+P RP + + +SS S ++ + +Q+Q H Y A +S
Sbjct: 113 IPPRPPALGAQSLIATSSQSVPYR------NTYQNQ-----------HLYQEEDASSSQM 155
Query: 140 LGGMATI---SFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLL--VSNNPRIRRQEME 194
L ATI F + + GM G M R+FG S +L+T+P+ L +N+PR+RRQEM+
Sbjct: 156 LNPGATILAPGFPHLVFGMFGEMFYTRVFGNSE-NLYTHPNSYHLGESNNSPRLRRQEMQ 214
Query: 195 LDKSLNRVSL 204
+KSLNR+S+
Sbjct: 215 ANKSLNRISI 224
>gi|356521355|ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
Length = 248
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 20/189 (10%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRG-GISSASDSKKPN--LGEV 79
KW + + P DE Q CPVCK +I ++VPLYGRG GI+ + K + G
Sbjct: 60 KWLHVQSASLAP---DEHPQ-CPVCKDDICHTTMVPLYGRGQGIAHSDRDGKASSYRGSF 115
Query: 80 VPSRPHPSALNTSVTSSSTSTRHQTQQL-HSDFFQSQAPAFHNPQYFPHHYGSHAALASS 138
+P RP P+ S+ S+S+ + QQL + + +Q+Q F+ P Y S L
Sbjct: 116 IPPRP-PALGAQSLMSTSSQS---AQQLPYRNPYQNQH--FNPPLYQDEDESSSQMLNPG 169
Query: 139 SLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLL---VSNNPRIRRQEMEL 195
+ M F + ++GM G M R+FG S +L+ YP+ L +N+PR+RRQEM+
Sbjct: 170 A--NMVAPGFPHLVVGMFGEMLYARVFGNSE-NLYNYPNSYHLGGSNNNSPRLRRQEMQA 226
Query: 196 DKSLNRVSL 204
+KSLNR+S+
Sbjct: 227 NKSLNRISI 235
>gi|212274431|ref|NP_001130966.1| uncharacterized LOC100192071 [Zea mays]
gi|194690576|gb|ACF79372.1| unknown [Zea mays]
gi|195626014|gb|ACG34837.1| ring domain containing protein [Zea mays]
gi|238013336|gb|ACR37703.1| unknown [Zea mays]
gi|414586142|tpg|DAA36713.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 261
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 88/190 (46%), Gaps = 29/190 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP--HPSALNTSVTSSST 98
++ CPVCKA +S +LVPLYGRGG +SKK G +P RP H + + S
Sbjct: 88 RRQCPVCKATLSTDTLVPLYGRGG-----NSKKSLDGMAIPRRPMVHRETVEEQQNAQSN 142
Query: 99 STRHQTQQLHSDFFQSQA--PAFHNPQ-------YFPHHYGSHA--ALASSSLGGMATIS 147
Q D Q Q A H+P Y P G + A LGGMA I
Sbjct: 143 VNDQHYHQSMEDNSQRQPLLQAHHHPIPTGFDFIYPPAPVGRGLIHSTAGGVLGGMAEIV 202
Query: 148 FFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFLF 207
L G + + +T P + + NPR+RR +ME+++SL+++ FL
Sbjct: 203 LPLALRGQM-----------PASLYYTNPYHAATQNVNPRLRRHQMEIERSLHQIWFFLC 251
Query: 208 CCLVLCLLLF 217
+VLCLLLF
Sbjct: 252 VFVVLCLLLF 261
>gi|297792779|ref|XP_002864274.1| hypothetical protein ARALYDRAFT_918469 [Arabidopsis lyrata subsp.
lyrata]
gi|297310109|gb|EFH40533.1| hypothetical protein ARALYDRAFT_918469 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 32/165 (19%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
QQQNCPVCK+NIS+ SLVPLYGRG SS+S S+ ++P R S+LN S+
Sbjct: 80 QQQNCPVCKSNISIGSLVPLYGRGMSSSSSSSEL----TIIPQRT-ASSLNPSL------ 128
Query: 100 TRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSS-LGGMATISFFNPLMGMLGG 158
Q HS HYG A SS+ L +SF P++GM G
Sbjct: 129 --QHHHQAHSS----------------RHYGGFTATESSTDLANAVMMSFLYPVIGMFGD 170
Query: 159 MTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
M RIFG T +L +P Q++ N +R ++++KSL+RVS
Sbjct: 171 MVHTRIFGTFTNTL-AHPFQNMRYINGNNNQRM-VQMEKSLHRVS 213
>gi|297799146|ref|XP_002867457.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313293|gb|EFH43716.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 193
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 58/200 (29%)
Query: 23 KWSPTSAPTNVPEKDDEQQQN-----CPVCKANISVASLVPLYGRGGISSASDSKKPNLG 77
KW T A N ++ D+ CPVCK+++S A+LVP+YGRG K P G
Sbjct: 47 KW--TYASNNSRQRVDQYDSKREPPKCPVCKSDVSEATLVPIYGRG-------QKTPQSG 97
Query: 78 EVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALAS 137
VPSRP + R +Q+L QSQ + P
Sbjct: 98 STVPSRPSGPVYDL---------RGVSQRLGEG--QSQRYMYRMP--------------- 131
Query: 138 SSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDK 197
+P+MG++ M R+FG S++++ Y N R RR+ M+ ++
Sbjct: 132 ------------DPVMGVVCEMVYRRLFGESSSNMAPYRD------TNVRSRRRAMQAEE 173
Query: 198 SLNRVSLFLFCCLVLCLLLF 217
SL+RV LFL C + +CLLLF
Sbjct: 174 SLSRVYLFLLCFMFMCLLLF 193
>gi|449523948|ref|XP_004168985.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RMA1H1-like [Cucumis sativus]
Length = 240
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
KW + + P DE Q CPVCKANIS ++VPLYGRG SA ++ G ++P
Sbjct: 57 KWLHVQSASLAP---DEPPQ-CPVCKANISHTTMVPLYGRG--QSAEHAEVDARGMLIP- 109
Query: 83 RPHPSALNTSVTSSSTSTRHQTQQL-HSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLG 141
P PSA ++ S +QQ + D Q+Q Y Y S+ + SSL
Sbjct: 110 -PRPSAFGNKALATIRSNNASSQQFAYGDLDQNQ-------NYIFDVYDSYEEDSGSSLF 161
Query: 142 GMA---TISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKS 198
+ S +P GMLG R + S S L SN+PR+RRQE+ +KS
Sbjct: 162 SLEDNPVGSSHHPTAGMLGETVYGRFYWDSENIYRHLNSYGLSGSNSPRLRRQEIVAEKS 221
Query: 199 LNRV 202
LN++
Sbjct: 222 LNKI 225
>gi|449457727|ref|XP_004146599.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
Length = 240
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 23 KWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
KW + + P DE Q CPVCKANIS ++VPLYGRG SA ++ G ++P
Sbjct: 57 KWLHVQSASLAP---DEPPQ-CPVCKANISHTTMVPLYGRG--QSAEHAEVDARGMLIP- 109
Query: 83 RPHPSALNTSVTSSSTSTRHQTQQL-HSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLG 141
P PSA ++ S +QQ + D Q+Q F Y S+ + SSL
Sbjct: 110 -PRPSAFGNKALATIRSNNASSQQFAYGDLDQNQNYNFDV-------YDSYEEDSGSSLF 161
Query: 142 GMA---TISFFNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDK 197
+ S +P GMLG R + S +++ +P S L SN+PR+RRQE+ +K
Sbjct: 162 SLEDNPVGSSHHPTAGMLGETVYGRFYWDS-ENIYRHPNSYGLSGSNSPRLRRQEIVAEK 220
Query: 198 SLNRV 202
SLN++
Sbjct: 221 SLNKI 225
>gi|15235242|ref|NP_194556.1| E3 ubiquitin-protein ligase RMA2 [Arabidopsis thaliana]
gi|75279780|sp|P93030.1|RMA2_ARATH RecName: Full=E3 ubiquitin-protein ligase RMA2; AltName:
Full=Protein RING membrane-anchor 2
gi|1773040|gb|AAC49830.1| RING zinc finger protein [Arabidopsis thaliana]
gi|7269681|emb|CAB79629.1| putative protein [Arabidopsis thaliana]
gi|27764994|gb|AAO23618.1| At4g28270 [Arabidopsis thaliana]
gi|110742855|dbj|BAE99326.1| hypothetical protein [Arabidopsis thaliana]
gi|332660062|gb|AEE85462.1| E3 ubiquitin-protein ligase RMA2 [Arabidopsis thaliana]
Length = 193
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 58/201 (28%)
Query: 22 QKWSPTSAPTNVPEKDDEQQQN-----CPVCKANISVASLVPLYGRGGISSASDSKKPNL 76
KW T A N ++ D+ CPVCK+++S A+LVP+YGRG K P
Sbjct: 46 HKW--TYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRG-------QKAPQS 96
Query: 77 GEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALA 136
G VPSRP T R Q+L +SQ + P
Sbjct: 97 GSNVPSRP---------TGPVYDLRGVGQRLGEG--ESQRYMYRMP-------------- 131
Query: 137 SSSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELD 196
+P+MG++ M R+FG S++++ Y N R RR+ M+ +
Sbjct: 132 -------------DPVMGVVCEMVYRRLFGESSSNMAPYRDM------NVRSRRRAMQAE 172
Query: 197 KSLNRVSLFLFCCLVLCLLLF 217
+SL+RV LFL C + +CL LF
Sbjct: 173 ESLSRVYLFLLCFMFMCLFLF 193
>gi|413937965|gb|AFW72516.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 255
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTST 100
++ CPVCKA +S +LVPLYGRGG SSA KKP P RP ++ S+ +
Sbjct: 86 RRQCPVCKAAVSPDALVPLYGRGGSSSA---KKPLASIPRPRRP-------ALRQSTHDS 135
Query: 101 RHQTQQLHSDFFQSQAPA--FHNPQYFPHHYGSHAALASSSLGGMATI-SFFNPLMGMLG 157
H ++ PA +P + H AL S+ G + S + GMLG
Sbjct: 136 GSGGHHHHHRHAETSTPARSLRHPAHA--HAAQFDALLSAPFGDRGMLHSTTSTTGGMLG 193
Query: 158 GMTLE----RIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLC 213
GM + + G + YPS L+S PR RR +E+++SL+++ FL +VLC
Sbjct: 194 GMAVAVLPLVLRGQARVPGMYYPSPYHLMS--PRQRRWHVEVERSLHQIWFFLCVFVVLC 251
Query: 214 LLLF 217
LLLF
Sbjct: 252 LLLF 255
>gi|388490876|gb|AFK33504.1| unknown [Lotus japonicus]
Length = 245
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
DE Q CPVCK +IS +++VPLYGRG + +L P RP S + +SS
Sbjct: 68 DEHPQ-CPVCKVDISHSTMVPLYGRGHAPRGGKASCCDL--FTPPRPPASGAQALLGTSS 124
Query: 98 TSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATI-SFFNPLMGML 156
+S Q QQ Q F +P Y + + + + M T S +P++GM
Sbjct: 125 SSQNSQQQQQLQYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHPHPVVGMF 184
Query: 157 GGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSL 204
G M R+FG S + S L+ SN R+RRQEM+ DK LNR+S+
Sbjct: 185 GEMVFARVFGNSENLYASPNSHQLMRSNGSRMRRQEMQADKFLNRISI 232
>gi|115459580|ref|NP_001053390.1| Os04g0530500 [Oryza sativa Japonica Group]
gi|38346627|emb|CAE02141.2| OSJNBa0074L08.21 [Oryza sativa Japonica Group]
gi|38346758|emb|CAE03863.2| OSJNBa0081C01.9 [Oryza sativa Japonica Group]
gi|90399374|emb|CAH68386.1| B1011H02.2 [Oryza sativa Indica Group]
gi|113564961|dbj|BAF15304.1| Os04g0530500 [Oryza sativa Japonica Group]
gi|116312030|emb|CAJ86386.1| OSIGBa0155K17.13 [Oryza sativa Indica Group]
gi|125549120|gb|EAY94942.1| hypothetical protein OsI_16747 [Oryza sativa Indica Group]
gi|125591077|gb|EAZ31427.1| hypothetical protein OsJ_15560 [Oryza sativa Japonica Group]
gi|215697920|dbj|BAG92115.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737491|dbj|BAG96621.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 253
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP--HPSALNTSVTSSST 98
++ CPVCKA +S LVPLYGRGG KK G +P RP A+ T ++
Sbjct: 83 RRQCPVCKATLSPDMLVPLYGRGG-----SLKKSLNGVPIPRRPTVQREAVEHQNTHNNI 137
Query: 99 STRHQT--------QQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFN 150
RH Q L S A F + Y P G L S+ GG+
Sbjct: 138 DDRHHENMEPSPPPQPLRHSSHHSSATEF-DFIYPPSPIGR--GLIHSTAGGV------- 187
Query: 151 PLMGMLGGM---TLERIFGGSTT-SLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFL 206
LGGM L F G S+F P + + R RR +ME+++SL+++ FL
Sbjct: 188 -----LGGMAVAVLPWAFRGQVPPSMFMSPHYVTAHNMSSRARRHQMEVERSLHQIWFFL 242
Query: 207 FCCLVLCLLLF 217
F +VLCLLLF
Sbjct: 243 FVFVVLCLLLF 253
>gi|242065892|ref|XP_002454235.1| hypothetical protein SORBIDRAFT_04g027250 [Sorghum bicolor]
gi|241934066|gb|EES07211.1| hypothetical protein SORBIDRAFT_04g027250 [Sorghum bicolor]
Length = 254
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTST 100
++ CPVCKA +S +L PLYGRGG SS++ P +P RP AL S
Sbjct: 86 RRQCPVCKAAVSPDALGPLYGRGGSSSSAKKPPPRGLASIPCRP---ALRQSAQDGGGHH 142
Query: 101 RHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHA---ALASSSLGGMATISFFNPLMGMLG 157
H+ ++ APA P++ + A AL + GG + + GMLG
Sbjct: 143 HHRHA-------ETDAPA-RTPRHPADAHAHAAQFDALLPTPFGGRGMMR--STAGGMLG 192
Query: 158 GMTLE----RIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLC 213
GM + + G + Y L+S PR RR ME+++SL+++ FLF + LC
Sbjct: 193 GMAVAVLPMVLRGQAQPPAMHYSGTYHLMS--PRQRRWHMEVERSLHQIWFFLFVFVALC 250
Query: 214 LLLF 217
LLLF
Sbjct: 251 LLLF 254
>gi|223943719|gb|ACN25943.1| unknown [Zea mays]
gi|413919011|gb|AFW58943.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413919012|gb|AFW58944.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 261
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP--HPSALNTSVTSSST 98
++ CPVCKA +S +LVPLYGRGG SKK G +P RP H A+ S
Sbjct: 89 RRQCPVCKATLSPDTLVPLYGRGG-----SSKKSLDGMAIPRRPMVHREAVEQQNARSHV 143
Query: 99 STRHQTQQL-HSDFFQSQAPAFHNPQ-------YFPHHYGSHA--ALASSSLGGMATISF 148
+ +H Q S Q A H+P Y P G + A LGGMA +
Sbjct: 144 NDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDFIYPPAPVGRGLIHSTAGGVLGGMAEVVL 203
Query: 149 FNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRV 202
L G L + +T P + NPR+RRQ+ME+++SL+++
Sbjct: 204 PWVLRGQL-----------PASLHYTSPYHVAAQNVNPRLRRQQMEIERSLHQI 246
>gi|226497016|ref|NP_001152715.1| ring domain containing protein [Zea mays]
gi|195659279|gb|ACG49107.1| ring domain containing protein [Zea mays]
Length = 256
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP--HPSALNTSVTSSST 98
++ CPVCKA +S +LVPLYGRGG SKK G +P RP H A+ S
Sbjct: 84 RRQCPVCKATLSPDTLVPLYGRGG-----SSKKSLDGMAIPRRPMVHREAVEQQNARSHV 138
Query: 99 STRHQTQQL-HSDFFQSQAPAFHNPQ-------YFPHHYGSHA--ALASSSLGGMATISF 148
+ +H Q S Q A H+P Y P G + A LGGMA +
Sbjct: 139 NDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDFIYPPAPVGRGLIHSTAGGVLGGMAEVVL 198
Query: 149 FNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRV 202
L G L + +T P + NPR+RRQ+ME+++SL+++
Sbjct: 199 PWVLRGQL-----------PASLHYTSPYHVAAQNVNPRLRRQQMEIERSLHQI 241
>gi|294462252|gb|ADE76676.1| unknown [Picea sitchensis]
Length = 154
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
+ CPVCK ++ ++PLYGRG + SA KP G +P RP +T+ T T
Sbjct: 6 KECPVCKGSVVEEKVIPLYGRGKVGSADPRTKPVPGVNIPHRPSGQRPDTART-----TD 60
Query: 102 HQTQQLHSDFFQSQAP----AFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLG 157
H +F Q P +F N F +G +L + G A + +P
Sbjct: 61 HHYPSQSFNFMAGQGPVPVGSFGN-ITFSAGFGLFPSLFGLQMHGFADTPYGSP------ 113
Query: 158 GMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLLF 217
GM GG P+ RQ+ + D L R +FL C +V+CL+ F
Sbjct: 114 GMPSNGFHGG------------------PQHVRQDQQ-DTFLRRFLVFLICLVVVCLIFF 154
>gi|217071982|gb|ACJ84351.1| unknown [Medicago truncatula]
gi|388503992|gb|AFK40062.1| unknown [Medicago truncatula]
Length = 231
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 78/182 (42%), Gaps = 51/182 (28%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD---SKKPNLGEV-VPSRPHPSALNT-- 91
DE Q CPVCK IS +VPLYGRG S D KP L ++ +P RP S + +
Sbjct: 71 DEPPQ-CPVCKDGISHTKMVPLYGRGQTLSRCDRDSDAKPTLEDISIPPRPPASGIQSLL 129
Query: 92 -SVTSSSTSTR--------HQTQQLHSDFFQ-SQAPAFHNPQYFPHHYGSHAALASSSLG 141
TS +R +QTQ ++S +Q + P HN LG
Sbjct: 130 AMATSPQNGSRQQLPYRNPYQTQHINSSTYQDNDTPQMHN------------------LG 171
Query: 142 GMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNR 201
T F + G FG S S ++ +++ R RRQEM +KSLNR
Sbjct: 172 TFMTPLFPQFVFG----------FGNSENS------HHMVGNSSSRWRRQEMLANKSLNR 215
Query: 202 VS 203
+S
Sbjct: 216 IS 217
>gi|388492984|gb|AFK34558.1| unknown [Medicago truncatula]
Length = 231
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASD---SKKPNLGEV-VPSRPHPSALNTSV 93
DE Q CPVCK IS +VPLYGRG S D KP L ++ +P RP S + + +
Sbjct: 71 DEPPQ-CPVCKDGISHTKMVPLYGRGQTLSRCDRDSDAKPTLEDISIPPRPPASGIQSLL 129
Query: 94 TSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLM 153
+++ QQL + NP Y H S + + +F PL
Sbjct: 130 AMATSPQNGSRQQL----------PYRNP-YQTQHINSSTYQDNDTPQMHNLGTFMTPLF 178
Query: 154 GMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRVS 203
+FG + S ++ +++ R RRQEM +KSLNR+S
Sbjct: 179 PQF-------VFGFGNSE----NSHHMVGNSSSRWRRQEMLANKSLNRIS 217
>gi|357142957|ref|XP_003572751.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Brachypodium
distachyon]
Length = 244
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPN-LGEVVPSRP--HPSALNT-----S 92
+Q CPVCKA +++ S VPLYGRGG+ KKP G +P RP H A+ +
Sbjct: 85 RQPCPVCKAALTLDSFVPLYGRGGVRP----KKPRPCGPAIPRRPAVHREAVEQRSAQHA 140
Query: 93 VTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPL 152
T S STR D P P G + ++S +A +++F+
Sbjct: 141 DTESDPSTRPPRDDAPLDVLYPPPP--------PLGRGMNVMHSASGGTALAALTWFS-- 190
Query: 153 MGMLGGMTLERIFGGSTTSLFTYPSQSLLVSN-NPRIRRQEMELDKSLNRV 202
G ++ P N +PR+RRQ ME+++SL +
Sbjct: 191 ------------RGEVPPPYYSSPYHLAAWENRSPRLRRQHMEVERSLREI 229
>gi|304359115|gb|ADM25743.1| RMA1 [Arabidopsis thaliana]
gi|304359117|gb|ADM25744.1| RMA1 [Arabidopsis thaliana]
gi|304359137|gb|ADM25754.1| RMA1 [Arabidopsis thaliana]
gi|304359143|gb|ADM25757.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S S+ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYSS--------ADLRLSQRVHFNSPQEGYYP----VSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|304359129|gb|ADM25750.1| RMA1 [Arabidopsis thaliana]
gi|304359169|gb|ADM25770.1| RMA1 [Arabidopsis thaliana]
gi|304359193|gb|ADM25782.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQDEGKNS-----VPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S S+ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYSS--------ADLRLSQRVHFNSPQEGYYP----VSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|304359157|gb|ADM25764.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKN-----SVPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S S+ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYSS--------ADLRLSQRVHFNSPQEGYYP----LSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|304359107|gb|ADM25739.1| RMA1 [Arabidopsis thaliana]
gi|304359109|gb|ADM25740.1| RMA1 [Arabidopsis thaliana]
gi|304359111|gb|ADM25741.1| RMA1 [Arabidopsis thaliana]
gi|304359113|gb|ADM25742.1| RMA1 [Arabidopsis thaliana]
gi|304359119|gb|ADM25745.1| RMA1 [Arabidopsis thaliana]
gi|304359121|gb|ADM25746.1| RMA1 [Arabidopsis thaliana]
gi|304359123|gb|ADM25747.1| RMA1 [Arabidopsis thaliana]
gi|304359125|gb|ADM25748.1| RMA1 [Arabidopsis thaliana]
gi|304359127|gb|ADM25749.1| RMA1 [Arabidopsis thaliana]
gi|304359131|gb|ADM25751.1| RMA1 [Arabidopsis thaliana]
gi|304359133|gb|ADM25752.1| RMA1 [Arabidopsis thaliana]
gi|304359139|gb|ADM25755.1| RMA1 [Arabidopsis thaliana]
gi|304359141|gb|ADM25756.1| RMA1 [Arabidopsis thaliana]
gi|304359145|gb|ADM25758.1| RMA1 [Arabidopsis thaliana]
gi|304359147|gb|ADM25759.1| RMA1 [Arabidopsis thaliana]
gi|304359151|gb|ADM25761.1| RMA1 [Arabidopsis thaliana]
gi|304359153|gb|ADM25762.1| RMA1 [Arabidopsis thaliana]
gi|304359155|gb|ADM25763.1| RMA1 [Arabidopsis thaliana]
gi|304359161|gb|ADM25766.1| RMA1 [Arabidopsis thaliana]
gi|304359165|gb|ADM25768.1| RMA1 [Arabidopsis thaliana]
gi|304359167|gb|ADM25769.1| RMA1 [Arabidopsis thaliana]
gi|304359171|gb|ADM25771.1| RMA1 [Arabidopsis thaliana]
gi|304359173|gb|ADM25772.1| RMA1 [Arabidopsis thaliana]
gi|304359177|gb|ADM25774.1| RMA1 [Arabidopsis thaliana]
gi|304359179|gb|ADM25775.1| RMA1 [Arabidopsis thaliana]
gi|304359181|gb|ADM25776.1| RMA1 [Arabidopsis thaliana]
gi|304359183|gb|ADM25777.1| RMA1 [Arabidopsis thaliana]
gi|304359185|gb|ADM25778.1| RMA1 [Arabidopsis thaliana]
gi|304359189|gb|ADM25780.1| RMA1 [Arabidopsis thaliana]
gi|304359191|gb|ADM25781.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S ++ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYAS--------TDLRLSQRVHFNSPQEGYYP----VSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|304359149|gb|ADM25760.1| RMA1 [Arabidopsis thaliana]
gi|304359163|gb|ADM25767.1| RMA1 [Arabidopsis thaliana]
gi|304359175|gb|ADM25773.1| RMA1 [Arabidopsis thaliana]
gi|304359187|gb|ADM25779.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQDEGKNS-----VPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S ++ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYAS--------TDLRLSQRVHFNSPQEGYYP----VSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|304359159|gb|ADM25765.1| RMA1 [Arabidopsis thaliana]
Length = 112
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 38 DEQQQN--CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q++ CPVCK+ +S ++LVPLYGRG ++ + K VP RP + +
Sbjct: 3 DEYQRHRQCPVCKSKVSHSTLVPLYGRGRCNTQEEGKNS-----VPKRPVGPVYRLEMPN 57
Query: 96 SSTSTRHQTQQLHSDFFQSQAPAFHNPQ--YFPHHYGSHAALASSSLGGMATISFFNPLM 153
S ++ +D SQ F++PQ Y+P ++S+SL A + +P+M
Sbjct: 58 SPYAS--------TDLRLSQRVHFNSPQEGYYP----VSGVMSSNSLSYSAVL---DPVM 102
Query: 154 GMLGGMTLER 163
M+G M R
Sbjct: 103 VMVGEMVATR 112
>gi|296084751|emb|CBI25895.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSAS--DSKKPNLGEVVPSRPHPSALNTSVTS 95
DE Q CPVCKA IS +LVPLYGRG S + + K G +P P P A T
Sbjct: 68 DEHPQ-CPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIP--PRPPACGTQALI 124
Query: 96 SSTSTRHQTQQL 107
++TS H QQL
Sbjct: 125 NATS--HNGQQL 134
>gi|414880335|tpg|DAA57466.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 226
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG +S S + G +PSRP T ST
Sbjct: 63 QECPVCKAVVEEGKLVPLYGRGG-NSTSPRARSVAGVEIPSRP---------TGQRPSTA 112
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q HS+ + Q P F
Sbjct: 113 PQPD--HSNHYPPQNPWF 128
>gi|224031863|gb|ACN35007.1| unknown [Zea mays]
Length = 225
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG SSA + G +PSRP T ST
Sbjct: 64 QECPVCKAVVEEGKLVPLYGRGG-SSAVPRARSVAGVEIPSRP---------TGQRPSTA 113
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q H++ + Q P F
Sbjct: 114 PQPD--HNNHYPHQNPWF 129
>gi|238013096|gb|ACR37583.1| unknown [Zea mays]
gi|414880334|tpg|DAA57465.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 247
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG +S S + G +PSRP T ST
Sbjct: 84 QECPVCKAVVEEGKLVPLYGRGG-NSTSPRARSVAGVEIPSRP---------TGQRPSTA 133
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q HS+ + Q P F
Sbjct: 134 PQPD--HSNHYPPQNPWF 149
>gi|195634609|gb|ACG36773.1| RING finger protein 5 [Zea mays]
Length = 247
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG +S S + G +PSRP T ST
Sbjct: 84 QECPVCKAVVEEGKLVPLYGRGG-NSTSPRARSVAGVEIPSRP---------TGQRPSTA 133
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q HS+ + Q P F
Sbjct: 134 PQPD--HSNHYPPQNPWF 149
>gi|226500242|ref|NP_001152268.1| LOC100285907 [Zea mays]
gi|195654491|gb|ACG46713.1| RING finger protein 5 [Zea mays]
Length = 246
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG SSA + G +PSRP T ST
Sbjct: 85 QECPVCKAVVEEGKLVPLYGRGG-SSAVPRARSVAGVEIPSRP---------TGQRPSTA 134
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q H++ + Q P F
Sbjct: 135 PQPD--HNNHYPHQNPWF 150
>gi|413952311|gb|AFW84960.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 246
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA + LVPLYGRGG SSA + G +PSRP T ST
Sbjct: 85 QECPVCKAVVEEGKLVPLYGRGG-SSAVPRARSVAGVEIPSRP---------TGQRPSTA 134
Query: 102 HQTQQLHSDFFQSQAPAF 119
Q H++ + Q P F
Sbjct: 135 PQPD--HNNHYPHQNPWF 150
>gi|440799688|gb|ELR20732.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q +CPVCKA I+ LVPLYGR G +P GE +P RP
Sbjct: 62 QPSCPVCKAAITREKLVPLYGR-GKEKVDPRTRPPTGEDIPERP 104
>gi|298710098|emb|CBJ31812.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 161
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA ++ ++++PLYGRG S KP + VPSRP
Sbjct: 49 QTECPVCKAGVTASNVIPLYGRGA-ESVDPRTKPTERDGVPSRP 91
>gi|168042258|ref|XP_001773606.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675145|gb|EDQ61644.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 30/183 (16%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCK ++ ++PLYGRG ++ K G +P RP V + R
Sbjct: 75 QECPVCKGSVEEDKVIPLYGRGKVNCVDPRTKAVPGLNIPHRP--------VGQRPETAR 126
Query: 102 HQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGM---ATISFFNPLMG--ML 156
H Q + PQ F G A++ G + A F L G +
Sbjct: 127 HAEHQ-------------YPPQGFNFMAGPTGPAATARFGNITLSAGFGLFPSLFGFQLH 173
Query: 157 GGMTLERIFGGSTTSLFTYP--SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCL 214
G + GGS+ L + + S + P + Q+ E S + L +F +++CL
Sbjct: 174 GFSETSGLGGGSSVHLGSAGGLAGSHMHGTQPIMPDQQQEALLSRLLLLLGVF--VIICL 231
Query: 215 LLF 217
LLF
Sbjct: 232 LLF 234
>gi|212275015|ref|NP_001130302.1| uncharacterized protein LOC100191396 [Zea mays]
gi|194688788|gb|ACF78478.1| unknown [Zea mays]
gi|194708060|gb|ACF88114.1| unknown [Zea mays]
gi|238009336|gb|ACR35703.1| unknown [Zea mays]
gi|414867984|tpg|DAA46541.1| TPA: putative RING/U-box superfamily protein isoform 1 [Zea mays]
gi|414867985|tpg|DAA46542.1| TPA: putative RING/U-box superfamily protein isoform 2 [Zea mays]
Length = 466
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 25/86 (29%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
+ CPVCK ++ +++P+YGRGG +++ D+ P RP + S
Sbjct: 165 HHRECPVCKGQVADDAIIPIYGRGGSAASVDN--------APPRP--------TGARVES 208
Query: 100 TRHQTQQLHSDFFQSQAPAFHNPQYF 125
TR Q QQL P FH P F
Sbjct: 209 TRQQQQQL---------PIFHPPNVF 225
>gi|224067343|ref|XP_002302470.1| predicted protein [Populus trichocarpa]
gi|222844196|gb|EEE81743.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 74/197 (37%), Gaps = 55/197 (27%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
+ + CPVCKA + LVPLYGRG S+ SK G +P+RP
Sbjct: 65 KSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKS-IPGVNIPNRP-------------AG 110
Query: 100 TRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGM 159
R +T P P+H+G H LGG A ++ LG
Sbjct: 111 QRPETA----------------PPPEPNHFGQHGFGFMGGLGGFAPMA-----TARLGNF 149
Query: 160 TLERIFGGSTTSLFT-----YPSQSL------------LVSNNPRIRRQ---EMELDKSL 199
T FGG SLF +P ++ +P RQ + + D L
Sbjct: 150 TFSAAFGGLIPSLFNLQVHGFPDAAMYGPAGYPYGFNSFHGGHPHGYRQHHGQGQQDYYL 209
Query: 200 NRVSLFLFCCLVLCLLL 216
R+ LF+ C+ L L+
Sbjct: 210 KRLLLFIGFCVFLALIW 226
>gi|66809039|ref|XP_638242.1| hypothetical protein DDB_G0285333 [Dictyostelium discoideum AX4]
gi|60466690|gb|EAL64741.1| hypothetical protein DDB_G0285333 [Dictyostelium discoideum AX4]
Length = 281
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q CPVCKA I+ L+P+YGRGG S D +K + + +P RP P +
Sbjct: 107 QQCPVCKAPITKEKLIPIYGRGG--SGEDPRKKS--QSIPQRP-PGRPEQARPRGRGDYN 161
Query: 102 HQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGM 155
+DFF S P G + + +S + A F L G+
Sbjct: 162 GGGSGGFNDFFNS-----------PFGSGVNGNIGNSGVSFSAGFGLFPGLFGI 204
>gi|330840606|ref|XP_003292304.1| hypothetical protein DICPUDRAFT_99293 [Dictyostelium purpureum]
gi|325077474|gb|EGC31184.1| hypothetical protein DICPUDRAFT_99293 [Dictyostelium purpureum]
Length = 256
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
Q CPVCK+ +S + ++P+YGRGG + K N+ + P RP
Sbjct: 110 QQCPVCKSPVSESKVIPIYGRGGSNEDPRKKTTNIPQRPPGRPE 153
>gi|224808570|gb|ACN63363.1| RING zinc finger protein 1 [Capsicum annuum]
Length = 219
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
Q CPVCKA I LVPLYGRG S+ S KP G +P RP T+ S +
Sbjct: 60 QSHECPVCKALIQEEKLVPLYGRGRTSTDPRS-KPVPGVEIPRRPAGQRPETAPPPESNT 118
Query: 100 TRHQTQQLHSDFFQSQAPAFHN 121
+ L F +F N
Sbjct: 119 FPNSGFGLMGGLFPGATASFGN 140
>gi|255579773|ref|XP_002530725.1| rnf5, putative [Ricinus communis]
gi|223529739|gb|EEF31679.1| rnf5, putative [Ricinus communis]
Length = 427
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 7/46 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKP--NLGEVVPSRPH 85
+ CPVCK +++ ++ P+YGRG S++++P +LG +P RPH
Sbjct: 175 KECPVCKGEVTIKNVTPIYGRG-----SNTREPEEDLGLEIPHRPH 215
>gi|18394721|ref|NP_564078.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|8778447|gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana]
gi|16323202|gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana]
gi|21436031|gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana]
gi|21553370|gb|AAM62463.1| unknown [Arabidopsis thaliana]
gi|332191707|gb|AEE29828.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 226
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q ++CPVCKA I LVPLYGR G SSA K G VP+RP
Sbjct: 56 QSKDCPVCKAVIEEDRLVPLYGR-GKSSADPRSKSIPGLEVPNRP 99
>gi|297842245|ref|XP_002889004.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334845|gb|EFH65263.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 137
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTS 92
Q +CPVCKA + SLVPLYG G SS SK + G VP+RP + + T+
Sbjct: 52 QSNHCPVCKALVKEDSLVPLYGMGKPSSDPRSKL-SCGVTVPNRPAATRIETA 103
>gi|302753330|ref|XP_002960089.1| hypothetical protein SELMODRAFT_402081 [Selaginella moellendorffii]
gi|300171028|gb|EFJ37628.1| hypothetical protein SELMODRAFT_402081 [Selaginella moellendorffii]
Length = 474
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV-VPSRPHPSALNT 91
+ + CPVCK ++ S++P+YGRG SSA E VP RPH +++
Sbjct: 219 ENEECPVCKGSVGENSIIPIYGRGSSSSARQELSVQDDEARVPPRPHARRVDS 271
>gi|218196957|gb|EEC79384.1| hypothetical protein OsI_20296 [Oryza sativa Indica Group]
Length = 336
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
CPVCK ++ ++ P+YGRG +S ++ K G V +P RPH + L +
Sbjct: 49 CPVCKGEVTEGNITPIYGRGNSTSDAEKKVAEEGNVSGPTIPPRPHGNRLES 100
>gi|225718068|gb|ACO14880.1| RING finger protein 185 [Caligus clemensi]
Length = 182
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS +VP+YGRG +D K P E +P RP
Sbjct: 60 RQMCPVCKAGISREKVVPVYGRGN----TDKKDPR--EKIPPRPR 98
>gi|443689234|gb|ELT91681.1| hypothetical protein CAPTEDRAFT_148333 [Capitella teleta]
Length = 189
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++D K P + VP RP
Sbjct: 72 RQVCPVCKAGISKDKVIPLYGRG----STDQKDPR--DKVPPRPQ 110
>gi|225430860|ref|XP_002269155.1| PREDICTED: uncharacterized protein LOC100246078 [Vitis vinifera]
Length = 226
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA I LVPLYGRG S SK PN + +PSRP
Sbjct: 64 HSQECPVCKALIQEEKLVPLYGRGKTPSDPRSKSIPN--DSIPSRP 107
>gi|147822469|emb|CAN72794.1| hypothetical protein VITISV_007472 [Vitis vinifera]
Length = 258
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA I LVPLYGRG S SK PN + +PSRP
Sbjct: 64 HSQECPVCKALIQEEKLVPLYGRGKTPSDPRSKSIPN--DSIPSRP 107
>gi|115464419|ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group]
gi|113579360|dbj|BAF17723.1| Os05g0470700 [Oryza sativa Japonica Group]
gi|215769483|dbj|BAH01712.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631919|gb|EEE64051.1| hypothetical protein OsJ_18880 [Oryza sativa Japonica Group]
Length = 562
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG +S ++ K G V +P RPH + L +
Sbjct: 272 HKECPVCKGEVTEGNITPIYGRGNSTSDAEKKVAEEGNVSGPTIPPRPHGNRLES 326
>gi|15222064|ref|NP_177636.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|5882725|gb|AAD55278.1|AC008263_9 Similar to gb|U81598 RING zinc finger protein (A-RZF) from
Arabidopsis thaliana and contains PF|00097 Zinc (RING)
finger domain [Arabidopsis thaliana]
gi|12323883|gb|AAG51909.1|AC013258_3 putative RING zinc finger protein; 43117-43530 [Arabidopsis
thaliana]
gi|21618087|gb|AAM67137.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|149944359|gb|ABR46222.1| At1g74990 [Arabidopsis thaliana]
gi|332197538|gb|AEE35659.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 137
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTS 99
+ +CPVCKA + +LVPLYG G SS SK N G VP+R P+A T
Sbjct: 52 KSNHCPVCKALVKEDTLVPLYGMGKPSSDPRSKL-NSGVTVPNR--PAATRTETARPRLE 108
Query: 100 TRHQTQQL---HSDF 111
RH HS F
Sbjct: 109 QRHHGSSFFGGHSSF 123
>gi|242058817|ref|XP_002458554.1| hypothetical protein SORBIDRAFT_03g035620 [Sorghum bicolor]
gi|241930529|gb|EES03674.1| hypothetical protein SORBIDRAFT_03g035620 [Sorghum bicolor]
Length = 197
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
Q+CPVCKA + LV LYGRGG S+A ++ S +TS T R
Sbjct: 59 QDCPVCKAVVEEGKLVSLYGRGGNSTAPRAR--------------SVAGVEITSRPTGQR 104
Query: 102 HQT--QQLHSDFFQSQAPAF 119
T Q H++ + Q P F
Sbjct: 105 PSTAPQPDHNNHYPHQNPWF 124
>gi|391337662|ref|XP_003743185.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Metaseiulus
occidentalis]
Length = 179
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 7/45 (15%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q Q CPVCKA IS ++PLYGRGG S +D + E +P RP
Sbjct: 49 QGQVCPVCKAGISRDKVIPLYGRGG--SKTDPR-----EKLPPRP 86
>gi|297850320|ref|XP_002893041.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338883|gb|EFH69300.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 226
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q + CPVCKA I LVPLYGR G SSA K G VP+RP
Sbjct: 56 QSKECPVCKAVIEEDRLVPLYGR-GKSSADPRSKSIPGLEVPNRP 99
>gi|255638304|gb|ACU19464.1| unknown [Glycine max]
Length = 231
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
Q + CPVCKA + LVPLYGRG S++D + ++ G+ +P RP
Sbjct: 65 QSRECPVCKALVEEEKLVPLYGRG--KSSTDPRSKSIPGDNIPHRP 108
>gi|218191249|gb|EEC73676.1| hypothetical protein OsI_08225 [Oryza sativa Indica Group]
Length = 63
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 185 NPRIRRQEMELDKSLNRVSLFLFCCLVLCLLLF 217
+PR+RRQ ME+++SL+++ FL VLCLLLF
Sbjct: 31 SPRLRRQHMEVERSLHQIWFFLVVFAVLCLLLF 63
>gi|115447525|ref|NP_001047542.1| Os02g0639800 [Oryza sativa Japonica Group]
gi|49388234|dbj|BAD25354.1| ring domain containing protein-like [Oryza sativa Japonica Group]
gi|113537073|dbj|BAF09456.1| Os02g0639800 [Oryza sativa Japonica Group]
gi|125583017|gb|EAZ23948.1| hypothetical protein OsJ_07675 [Oryza sativa Japonica Group]
gi|215701324|dbj|BAG92748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740985|dbj|BAG97480.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 286
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 185 NPRIRRQEMELDKSLNRVSLFLFCCLVLCLLLF 217
+PR+RRQ ME+++SL+++ FL VLCLLLF
Sbjct: 254 SPRLRRQHMEVERSLHQIWFFLVVFAVLCLLLF 286
>gi|356510276|ref|XP_003523865.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Glycine max]
gi|356510278|ref|XP_003523866.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Glycine max]
Length = 231
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
Q + CPVCKA + LVPLYGRG S++D + ++ G+ +P RP
Sbjct: 65 QSRECPVCKALVEEEKLVPLYGRG--KSSTDPRSKSIPGDNIPHRP 108
>gi|328875410|gb|EGG23774.1| hypothetical protein DFA_05910 [Dictyostelium fasciculatum]
Length = 304
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA IS L+P+YGRG SS K+P+ +PSRP
Sbjct: 168 QQCPVCKAPISEEKLIPIYGRGN-SSDPRKKRPS---SIPSRP 206
>gi|297735216|emb|CBI17578.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA I LVPLYGRG S SK PN + +PSRP
Sbjct: 54 HSQECPVCKALIQEEKLVPLYGRGKTPSDPRSKSIPN--DSIPSRP 97
>gi|321454594|gb|EFX65759.1| hypothetical protein DAPPUDRAFT_65278 [Daphnia pulex]
Length = 188
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 7/45 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q+CPVCKA IS ++PLYGRGG S D + E +P RP
Sbjct: 71 RQSCPVCKAAISRDKVIPLYGRGG--SKEDPR-----EKLPPRPQ 108
>gi|86171667|ref|XP_966256.1| c3h4-type ring finger protein, putative [Plasmodium falciparum 3D7]
gi|46361225|emb|CAG25086.1| c3h4-type ring finger protein, putative [Plasmodium falciparum 3D7]
Length = 449
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSS 96
+ +CPVCKA +S +++PLYGRG SS +P P R N + +++
Sbjct: 320 KNNDCPVCKAEVSKENVIPLYGRGKNSSDHKYAQPEEPRPTPKRKEGVRRNNTYSNN 376
>gi|68299223|emb|CAJ13712.1| putative zinc finger protein [Capsicum chinense]
Length = 220
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA I LVPLYGRG + S KP G +PSRP
Sbjct: 61 QCHECPVCKALIQEEKLVPLYGRGRTFTDPRS-KPIPGLEIPSRP 104
>gi|307111917|gb|EFN60151.1| hypothetical protein CHLNCDRAFT_33679 [Chlorella variabilis]
Length = 215
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + ++P+YGRGG K +L E VP RP
Sbjct: 97 RTCPVCKAGVEKDKVIPIYGRGGNEDPRSKSKGDL-EAVPQRP 138
>gi|413952048|gb|AFW84697.1| putative RING/U-box superfamily protein [Zea mays]
Length = 581
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 41 QQNCPVCKANISVASLVPLYGRG---GISSASDSKKPNLGEVVPSRPH 85
+ CPVCK ++ A++ P+YGRG + D K P G +P RPH
Sbjct: 290 HKECPVCKGEVTEANITPIYGRGNSDAEKTVEDWKSP--GPTIPPRPH 335
>gi|405960320|gb|EKC26251.1| hypothetical protein CGI_10024104 [Crassostrea gigas]
Length = 1362
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++P+YGRG AS+ P E +P RP
Sbjct: 63 RQTCPVCKAGISKDKVIPIYGRG----ASEQTDPR--EKLPPRPQ 101
>gi|226503865|ref|NP_001152732.1| LOC100286373 [Zea mays]
gi|195659439|gb|ACG49187.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 581
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 41 QQNCPVCKANISVASLVPLYGRG---GISSASDSKKPNLGEVVPSRPH 85
+ CPVCK ++ A++ P+YGRG + D K P G +P RPH
Sbjct: 290 HKECPVCKGEVTEANITPIYGRGNSDAEKTVEDWKSP--GPTIPPRPH 335
>gi|302818013|ref|XP_002990681.1| hypothetical protein SELMODRAFT_49525 [Selaginella
moellendorffii]
gi|300141603|gb|EFJ08313.1| hypothetical protein SELMODRAFT_49525 [Selaginella
moellendorffii]
Length = 98
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRP 84
+ CPVCKA + ++PLYGRG + S+SD + V +PSRP
Sbjct: 47 KECPVCKAPVHEDKVIPLYGRGCVESSSDHRDHATSSVPEMEIPSRP 93
>gi|281204306|gb|EFA78502.1| hypothetical protein PPL_09154 [Polysphondylium pallidum PN500]
Length = 268
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA ++ L+P+YGRG S+A+D +K +P RP
Sbjct: 134 QQCPVCKAPVTEEKLIPIYGRG--SNATDPRK---NRSIPQRP 171
>gi|356555274|ref|XP_003545959.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Glycine max]
Length = 196
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNT 91
+ CPVCK +++ ++P+YG + + + +G VP+RP P + +
Sbjct: 140 RECPVCKGDVTEEGIIPIYGNASVDNNGKFESNEIGLTVPARPRPHRIES 189
>gi|116781137|gb|ABK21979.1| unknown [Picea sitchensis]
gi|148908424|gb|ABR17325.1| unknown [Picea sitchensis]
Length = 240
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ Q CPVCKA + +VPLYGRG + + K G +P RP
Sbjct: 77 KSQECPVCKALVEEDKIVPLYGRGKVGAPDPRSKAIPGINIPHRP 121
>gi|157113649|ref|XP_001652037.1| rnf5 [Aedes aegypti]
gi|108877619|gb|EAT41844.1| AAEL006550-PA [Aedes aegypti]
Length = 238
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK++IS ++PLYGRGG S D +K VP RP
Sbjct: 121 RNTCPVCKSSISKEKVIPLYGRGG--SKEDPRK-----TVPPRP 157
>gi|312380753|gb|EFR26663.1| hypothetical protein AND_07113 [Anopheles darlingi]
Length = 286
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK++IS ++PLYGRGG S D +K VP RP
Sbjct: 168 RNTCPVCKSSISKEKVIPLYGRGG--SKEDPRK-----TVPPRP 204
>gi|350411990|ref|XP_003489510.1| PREDICTED: RING finger protein 185-like [Bombus impatiens]
Length = 182
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG D+K+ + VP RP
Sbjct: 64 RQMCPVCKAAISKDKVIPLYGRG------DTKQEDPRNNVPPRP 101
>gi|158295219|ref|XP_316088.3| AGAP006041-PA [Anopheles gambiae str. PEST]
gi|157015930|gb|EAA10978.3| AGAP006041-PA [Anopheles gambiae str. PEST]
Length = 282
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK++IS ++PLYGRGG S D +K VP RP
Sbjct: 163 RNTCPVCKSSISKEKVIPLYGRGG--SKEDPRK-----TVPPRP 199
>gi|91090264|ref|XP_970269.1| PREDICTED: similar to ring finger protein 5 [Tribolium castaneum]
gi|270013784|gb|EFA10232.1| hypothetical protein TcasGA2_TC012429 [Tribolium castaneum]
Length = 190
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +K+ + E VP RP
Sbjct: 70 RQVCPVCKAAISKEKVIPLYGRGS------TKQEDPREKVPPRP 107
>gi|449470015|ref|XP_004152714.1| PREDICTED: RING finger protein 5-like [Cucumis sativus]
gi|449496045|ref|XP_004160021.1| PREDICTED: RING finger protein 5-like [Cucumis sativus]
Length = 230
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA I LVPLYGRG S+ SK G +P+RP
Sbjct: 65 QECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIP-GINIPNRP 106
>gi|302762372|ref|XP_002964608.1| hypothetical protein SELMODRAFT_405983 [Selaginella moellendorffii]
gi|300168337|gb|EFJ34941.1| hypothetical protein SELMODRAFT_405983 [Selaginella moellendorffii]
Length = 403
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKK-PN---LGEVVPSRP 84
CPVCK +S A ++P+YGRGG AS + P+ + +P+RP
Sbjct: 274 HNDECPVCKGAVSDADVIPIYGRGGDGGASVERSCPSANIFAQHIPARP 322
>gi|225712824|gb|ACO12258.1| RING finger protein 185 [Lepeophtheirus salmonis]
gi|290561086|gb|ADD37945.1| RING finger protein 185 [Lepeophtheirus salmonis]
Length = 179
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
Q CPVCKA IS +VP+YGRG + D K P E +P RP
Sbjct: 63 QICPVCKAGISREKVVPVYGRGNM----DRKDPR--ENIPPRPR 100
>gi|290462653|gb|ADD24374.1| RING finger protein 185 [Lepeophtheirus salmonis]
Length = 179
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
Q CPVCKA IS +VP+YGRG + D K P E +P RP
Sbjct: 63 QICPVCKAGISREKVVPVYGRGNM----DRKDPR--ENIPPRPR 100
>gi|255086085|ref|XP_002509009.1| histone ubiquitination protein group a [Micromonas sp. RCC299]
gi|226524287|gb|ACO70267.1| histone ubiquitination protein group a [Micromonas sp. RCC299]
Length = 222
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ Q CPVCKA +S ++PLYGRG S K LG VP+RP
Sbjct: 95 EAQQCPVCKAAVSENLVIPLYGRG--SCEHPRGKQMLGMDVPTRP 137
>gi|255538544|ref|XP_002510337.1| rnf5, putative [Ricinus communis]
gi|223551038|gb|EEF52524.1| rnf5, putative [Ricinus communis]
Length = 229
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q + CPVCKA + LVPLYGRG S+ SK G +P+RP
Sbjct: 65 QSKECPVCKALVEEEKLVPLYGRGKTSTDPRSKS-IPGVNIPNRP 108
>gi|222619304|gb|EEE55436.1| hypothetical protein OsJ_03576 [Oryza sativa Japonica Group]
Length = 276
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + LVPLYGRG S+ S+ G +PSRP
Sbjct: 114 RECPVCKAGLEEEKLVPLYGRGKASTDPRSRS-VAGVQIPSRP 155
>gi|401405597|ref|XP_003882248.1| Zinc finger (C3HC4 RING finger) protein, related [Neospora caninum
Liverpool]
gi|325116663|emb|CBZ52216.1| Zinc finger (C3HC4 RING finger) protein, related [Neospora caninum
Liverpool]
Length = 413
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNTSVTSSST 98
CPVCK + + ++++P+YGRG D+ P+ GE +P RP S S+
Sbjct: 236 ECPVCKGHTTTSNVIPIYGRGAEKHPRDA--PDKGETAAGRIPERPRAERPEPGPQSQSS 293
Query: 99 STRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGG 158
F S + P +G +SL FF L GG
Sbjct: 294 VRFGPGDTKDKRCFGSGRDSVF---VCPCTWGFAGGTGGASL-SFGLFPFFG-LGVTWGG 348
Query: 159 MTLERIFGGSTTSLFTY---PSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLL 215
+ F S +S F + P + P + R + L + R+ F L C +
Sbjct: 349 GAVNTGFSTSASSAFDWLFFPPGAHR--RRPGVHRPDQVLTEEQQRMQSLGFLLLAFCFV 406
Query: 216 LF 217
L+
Sbjct: 407 LY 408
>gi|242088219|ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
gi|241945227|gb|EES18372.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
Length = 551
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG S ++ K G +P RPH + L +
Sbjct: 267 HKECPVCKGEVTEGNITPIYGRGNSGSDTEKKVAEDGNASGPKIPPRPHGNRLES 321
>gi|125527834|gb|EAY75948.1| hypothetical protein OsI_03866 [Oryza sativa Indica Group]
Length = 224
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + LVPLYGRG S+ S+ G +PSRP
Sbjct: 62 RECPVCKAGLEEEKLVPLYGRGKASTDPRSRS-VAGVQIPSRP 103
>gi|297597672|ref|NP_001044354.2| Os01g0766200 [Oryza sativa Japonica Group]
gi|53792435|dbj|BAD53343.1| putative RING finger protein [Oryza sativa Japonica Group]
gi|57899573|dbj|BAD87152.1| putative RING finger protein [Oryza sativa Japonica Group]
gi|215687336|dbj|BAG91864.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697457|dbj|BAG91451.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673716|dbj|BAF06268.2| Os01g0766200 [Oryza sativa Japonica Group]
Length = 224
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + LVPLYGRG S+ S+ G +PSRP
Sbjct: 62 RECPVCKAGLEEEKLVPLYGRGKASTDPRSRS-VAGVQIPSRP 103
>gi|355716969|gb|AES05781.1| ring finger protein 5 [Mustela putorius furo]
Length = 109
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
++Q CPVCKA IS +VPLYGRG + S+ P L P RP
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG----SQKSQDPRL--KTPPRPQ 99
>gi|449448400|ref|XP_004141954.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
gi|449487905|ref|XP_004157859.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
sativus]
Length = 229
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 9/49 (18%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL----GEVVPSRP 84
Q Q CPVCKA I LVPLYGRG I S P L G +P+RP
Sbjct: 68 QCQECPVCKALIQEEKLVPLYGRGKIPS-----DPRLNTYPGLDIPNRP 111
>gi|444721141|gb|ELW61894.1| E3 ubiquitin-protein ligase RNF5 [Tupaia chinensis]
Length = 141
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 45 ERQECPVCKAGISREKVVPLYGRG 68
>gi|356519062|ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
gi|356519064|ref|XP_003528194.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
Length = 231
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
Q + CPVCKA + LVPLYGRG S++D + ++ G +P RP
Sbjct: 65 QSRECPVCKALVEEEKLVPLYGRG--KSSTDPRSKSIPGVNIPHRP 108
>gi|324510867|gb|ADY44540.1| RING finger protein 185 [Ascaris suum]
gi|324513476|gb|ADY45537.1| RING finger protein 185 [Ascaris suum]
Length = 196
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 7/45 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCK+ IS ++PLYGRGG + SD + E VP RP
Sbjct: 70 RQLCPVCKSAISKDKVIPLYGRGG--TESDPR-----EKVPPRPR 107
>gi|147851991|emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
Length = 232
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG S+ SK G +P+RP
Sbjct: 68 QECPVCKALVEEEKLVPLYGRGKTSTDPRSKS-IPGINIPNRP 109
>gi|255632464|gb|ACU16582.1| unknown [Glycine max]
Length = 231
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
Q + CPVCKA + LVPLYGRG S++D + ++ G +P RP
Sbjct: 65 QSRECPVCKALVEEEKLVPLYGRG--KSSTDPRSKSIPGVNIPHRP 108
>gi|308474556|ref|XP_003099499.1| CRE-RNF-5 protein [Caenorhabditis remanei]
gi|308266688|gb|EFP10641.1| CRE-RNF-5 protein [Caenorhabditis remanei]
Length = 278
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCK+ I + +VP+YGRGG DS P E +P RP
Sbjct: 104 QVCPVCKSAIDGSKVVPIYGRGG-----DSSDPR--EKIPPRP 139
>gi|346466385|gb|AEO33037.1| hypothetical protein [Amblyomma maculatum]
Length = 180
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRGG S D + E +P RP
Sbjct: 62 RQVCPVCKAGISRDKVIPLYGRGG--SKQDPR-----EKLPPRP 98
>gi|260820608|ref|XP_002605626.1| hypothetical protein BRAFLDRAFT_141138 [Branchiostoma floridae]
gi|229290961|gb|EEN61636.1| hypothetical protein BRAFLDRAFT_141138 [Branchiostoma floridae]
Length = 171
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+Q CPVCKA IS ++PLYGRGG +K P
Sbjct: 55 RQLCPVCKAGISRDKVIPLYGRGGSQMDPRTKTP 88
>gi|413945681|gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
Length = 550
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG S + K G+ +P RPH + L +
Sbjct: 267 HKECPVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKASGPKIPPRPHGNRLES 321
>gi|226498124|ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 550
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG S + K G+ +P RPH + L +
Sbjct: 267 HKECPVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKASGPKIPPRPHGNRLES 321
>gi|427786955|gb|JAA58929.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 185
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRGG S D + E +P RP
Sbjct: 67 RQVCPVCKAGISRDKVIPLYGRGG--SKQDPR-----EKLPPRP 103
>gi|297720547|ref|NP_001172635.1| Os01g0830200 [Oryza sativa Japonica Group]
gi|56202103|dbj|BAD73632.1| putative ring finger protein 5 [Oryza sativa Japonica Group]
gi|56785168|dbj|BAD81844.1| putative ring finger protein 5 [Oryza sativa Japonica Group]
gi|215697377|dbj|BAG91371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704669|dbj|BAG94297.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189311|gb|EEC71738.1| hypothetical protein OsI_04298 [Oryza sativa Indica Group]
gi|222619487|gb|EEE55619.1| hypothetical protein OsJ_03954 [Oryza sativa Japonica Group]
gi|255673841|dbj|BAH91365.1| Os01g0830200 [Oryza sativa Japonica Group]
Length = 561
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKK-----PNLGEVVPSRPHPSALNT 91
+ CPVCK ++ A++ P+YGRG +S D++K G +P RPH + L +
Sbjct: 269 HKECPVCKGEVTEANITPIYGRG--NSCLDAEKAVEGGKQTGPTIPPRPHGNRLES 322
>gi|389584554|dbj|GAB67286.1| c3h4-type ring finger protein [Plasmodium cynomolgi strain B]
Length = 488
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
++ +CPVCKA +S +++PLYGRG ++S+ K N+ E P+
Sbjct: 362 KKNNDCPVCKAEVSRENVIPLYGRG--KNSSEHKYSNVEEPRPT 403
>gi|393909066|gb|EFO21580.2| hypothetical protein LOAG_06910 [Loa loa]
Length = 189
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
+Q CPVCK+ IS ++PLYGRGG + K P P P T + SS
Sbjct: 63 RQLCPVCKSAISREKVIPLYGRGGNDTDPRDKVP---------PRPKGQRTEMPQSS 110
>gi|388492344|gb|AFK34238.1| unknown [Lotus japonicus]
gi|388493550|gb|AFK34841.1| unknown [Lotus japonicus]
Length = 228
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q + CPVCKA + LVPLYGRG SS S+ G +P RP
Sbjct: 64 QSRECPVCKALVEEEKLVPLYGRGKTSSDPRSRSIP-GVNIPHRP 107
>gi|115292095|gb|AAI22497.1| LOC733145 protein [Xenopus laevis]
Length = 186
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
++Q CPVCKA +S ++P+YGRG S+ K P L P RP
Sbjct: 65 ERQGCPVCKAGVSREKVIPIYGRG----DSNQKDPRLK--TPPRPQ 104
>gi|357133292|ref|XP_003568260.1| PREDICTED: uncharacterized protein LOC100827774 [Brachypodium
distachyon]
Length = 548
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 8/57 (14%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV------VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG +S+SD +K +V +P+RPH + L +
Sbjct: 260 HKECPVCKGEVTEGNITPIYGRG--NSSSDVEKKVAEDVNVSGPNIPARPHGNRLES 314
>gi|57870224|gb|AAH89048.1| LOC733145 protein [Xenopus laevis]
Length = 167
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
++Q CPVCKA +S ++P+YGRG S+ K P L P RP
Sbjct: 46 ERQECPVCKAGVSREKVIPIYGRG----DSNQKDPRLK--TPPRPQ 85
>gi|410958828|ref|XP_003986016.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Felis
catus]
Length = 182
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|341889703|gb|EGT45638.1| hypothetical protein CAEBREN_31835 [Caenorhabditis brenneri]
Length = 239
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
Q CPVCK+ I + +VP+YGRGG S+ SK P
Sbjct: 61 QVCPVCKSAIDGSKVVPIYGRGGDSADPRSKVP 93
>gi|57094383|ref|XP_532092.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Canis
lupus familiaris]
Length = 180
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|296474281|tpg|DAA16396.1| TPA: ring finger protein 5 [Bos taurus]
Length = 180
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS ++VPLYGRG
Sbjct: 60 ERQECPVCKAGISRENVVPLYGRG 83
>gi|62858735|ref|NP_001017071.1| ring finger protein 5, E3 ubiquitin protein ligase [Xenopus
(Silurana) tropicalis]
gi|115530756|emb|CAL49360.1| ring finger protein 5 [Xenopus (Silurana) tropicalis]
Length = 168
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++P+YGRG S+ K P L P RP
Sbjct: 47 DRQECPVCKAGISREKVIPIYGRG----DSNQKDPRLK--TPPRPQ 86
>gi|47209497|emb|CAF91449.1| unnamed protein product [Tetraodon nigroviridis]
Length = 139
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGIS 66
+Q CPVCKA IS ++PLYGRG S
Sbjct: 14 RQQCPVCKAGISREKVIPLYGRGSTS 39
>gi|410958826|ref|XP_003986015.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Felis
catus]
Length = 180
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|224096906|ref|XP_002310781.1| predicted protein [Populus trichocarpa]
gi|222853684|gb|EEE91231.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSK-KPNLGEVVPSRP 84
CPVCKA I LVPLYGRG +S SD + K G +PSRP
Sbjct: 64 HSHECPVCKAIIQEEKLVPLYGRG--NSQSDPRSKSYPGIDIPSRP 107
>gi|157428014|ref|NP_001098915.1| E3 ubiquitin-protein ligase RNF5 [Bos taurus]
gi|133777945|gb|AAI14819.1| RNF5 protein [Bos taurus]
Length = 180
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS ++VPLYGRG
Sbjct: 60 ERQECPVCKAGISRENVVPLYGRG 83
>gi|440901161|gb|ELR52152.1| E3 ubiquitin-protein ligase RNF5 [Bos grunniens mutus]
Length = 182
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS ++VPLYGRG
Sbjct: 60 ERQECPVCKAGISRENVVPLYGRG 83
>gi|332246107|ref|XP_003272191.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|297677810|ref|XP_002816739.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Pongo
abelii]
Length = 180
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|178056546|ref|NP_001116696.1| E3 ubiquitin-protein ligase RNF5 [Sus scrofa]
gi|301788544|ref|XP_002929683.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like isoform 1
[Ailuropoda melanoleuca]
gi|395832090|ref|XP_003789110.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 1
[Otolemur garnettii]
gi|395832092|ref|XP_003789111.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 2
[Otolemur garnettii]
gi|403307780|ref|XP_003944361.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|147225138|emb|CAN13266.1| ring finger protein 5 [Sus scrofa]
gi|281345630|gb|EFB21214.1| hypothetical protein PANDA_019927 [Ailuropoda melanoleuca]
Length = 180
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|403307782|ref|XP_003944362.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 182
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|340378537|ref|XP_003387784.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Amphimedon
queenslandica]
Length = 145
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCK+ I L+PLYGRG SD K P E +P RP
Sbjct: 11 CPVCKSVIDKEKLIPLYGRG-----SDQKDPR--ESLPPRP 44
>gi|156101177|ref|XP_001616282.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805156|gb|EDL46555.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 519
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
++ +CPVCKA +S +++PLYGRG ++S+ K N+ E P+
Sbjct: 393 KKNNDCPVCKAEVSRENVIPLYGRG--KNSSEHKYSNVEEPRPT 434
>gi|326693966|ref|NP_001192045.1| ring finger protein 5 [Macaca mulatta]
gi|402866574|ref|XP_003897454.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Papio
anubis]
gi|380788141|gb|AFE65946.1| E3 ubiquitin-protein ligase RNF5 [Macaca mulatta]
gi|384943502|gb|AFI35356.1| E3 ubiquitin-protein ligase RNF5 [Macaca mulatta]
Length = 180
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|5902054|ref|NP_008844.1| E3 ubiquitin-protein ligase RNF5 [Homo sapiens]
gi|114606646|ref|XP_001164301.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Pan
troglodytes]
gi|332246105|ref|XP_003272190.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Nomascus
leucogenys]
gi|397519343|ref|XP_003829821.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Pan
paniscus]
gi|426352606|ref|XP_004043802.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 1 [Gorilla
gorilla gorilla]
gi|74762702|sp|Q99942.1|RNF5_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF5; AltName:
Full=Protein G16; AltName: Full=RING finger protein 5;
AltName: Full=Ram1 homolog; Short=HsRma1
gi|1841551|gb|AAB47492.1| G16 [Homo sapiens]
gi|13278762|gb|AAH04155.1| Ring finger protein 5 [Homo sapiens]
gi|13366064|dbj|BAB39359.1| HsRma1 [Homo sapiens]
gi|30583049|gb|AAP35769.1| ring finger protein 5 [Homo sapiens]
gi|61359065|gb|AAX41663.1| ring finger protein 5 [synthetic construct]
gi|61359070|gb|AAX41664.1| ring finger protein 5 [synthetic construct]
gi|110645820|gb|AAI19743.1| RNF5 protein [Homo sapiens]
gi|111493912|gb|AAI11393.1| RNF5 protein [Homo sapiens]
gi|111599522|gb|AAI19742.1| Ring finger protein 5 [Homo sapiens]
gi|118341459|gb|AAI27652.1| Ring finger protein 5 [Homo sapiens]
gi|118341575|gb|AAI27653.1| Ring finger protein 5 [Homo sapiens]
gi|119624012|gb|EAX03607.1| ring finger protein 5, isoform CRA_a [Homo sapiens]
gi|119624014|gb|EAX03609.1| ring finger protein 5, isoform CRA_a [Homo sapiens]
gi|157279242|gb|AAI48256.1| Ring finger protein 5 [Homo sapiens]
gi|189053178|dbj|BAG34800.1| unnamed protein product [Homo sapiens]
gi|208966188|dbj|BAG73108.1| E3 ubiquitin-protein ligase RNF5 [synthetic construct]
gi|325463807|gb|ADZ15674.1| ring finger protein 5 [synthetic construct]
gi|410210928|gb|JAA02683.1| ring finger protein 5 [Pan troglodytes]
gi|410246744|gb|JAA11339.1| ring finger protein 5 [Pan troglodytes]
gi|410290702|gb|JAA23951.1| ring finger protein 5 [Pan troglodytes]
gi|410328391|gb|JAA33142.1| ring finger protein 5 [Pan troglodytes]
Length = 180
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|426250487|ref|XP_004018968.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF5
[Ovis aries]
Length = 180
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS ++VPLYGRG
Sbjct: 60 ERQECPVCKAGISRENVVPLYGRG 83
>gi|348531122|ref|XP_003453059.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Oreochromis
niloticus]
Length = 247
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +S + P L P RP
Sbjct: 118 RQQCPVCKAGISREKVIPLYGRG----SSSQEDPRLK--TPPRPQ 156
>gi|296207302|ref|XP_002750586.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Callithrix
jacchus]
Length = 180
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|397519345|ref|XP_003829822.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Pan
paniscus]
gi|426352608|ref|XP_004043803.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Gorilla
gorilla gorilla]
Length = 182
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|402866576|ref|XP_003897455.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 isoform 2 [Papio
anubis]
Length = 181
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|326676346|ref|XP_003200552.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Danio rerio]
Length = 205
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +S + P L P RP
Sbjct: 81 RQQCPVCKAGISRDKVIPLYGRG----SSSQEDPRL--KTPPRPQ 119
>gi|30584543|gb|AAP36524.1| Homo sapiens ring finger protein 5 [synthetic construct]
gi|61369227|gb|AAX43303.1| ring finger protein 5 [synthetic construct]
gi|61369235|gb|AAX43304.1| ring finger protein 5 [synthetic construct]
Length = 181
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|348519497|ref|XP_003447267.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Oreochromis
niloticus]
Length = 211
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +S + P L P RP
Sbjct: 84 RQQCPVCKAGISREKVIPLYGRG----SSSQEDPRL--KTPPRP 121
>gi|149732078|ref|XP_001493502.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Equus caballus]
Length = 180
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|432881486|ref|XP_004073806.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 1 [Oryzias
latipes]
gi|432881488|ref|XP_004073807.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 2 [Oryzias
latipes]
Length = 197
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +S + P L P RP
Sbjct: 75 RQQCPVCKAGISREKVIPLYGRG----SSSQEDPRL--KTPPRPQ 113
>gi|194382366|dbj|BAG58938.1| unnamed protein product [Homo sapiens]
Length = 182
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|432089468|gb|ELK23410.1| E3 ubiquitin-protein ligase RNF5 [Myotis davidii]
Length = 176
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|126309605|ref|XP_001369103.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Monodelphis
domestica]
Length = 180
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|355561568|gb|EHH18200.1| hypothetical protein EGK_14753 [Macaca mulatta]
gi|355748445|gb|EHH52928.1| hypothetical protein EGM_13465 [Macaca fascicularis]
Length = 214
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|241828030|ref|XP_002416664.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215511128|gb|EEC20581.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 184
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+Q CPVCKA IS ++PLYGRGG K P
Sbjct: 66 RQVCPVCKAGISRDKVIPLYGRGGSKQDPRDKLP 99
>gi|48095378|ref|XP_392285.1| PREDICTED: RING finger protein 185-like isoform 2 [Apis mellifera]
gi|328780209|ref|XP_003249767.1| PREDICTED: RING finger protein 185-like isoform 1 [Apis mellifera]
gi|380030255|ref|XP_003698767.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform 1 [Apis
florea]
gi|380030257|ref|XP_003698768.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform 2 [Apis
florea]
Length = 182
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG D++ + VP RP
Sbjct: 64 RQMCPVCKAAISKDKVIPLYGRG------DTRHEDPRNNVPPRP 101
>gi|395533857|ref|XP_003768969.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Sarcophilus
harrisii]
Length = 180
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 60 ERQECPVCKAGISREKVVPLYGRG 83
>gi|397521573|ref|XP_003830868.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Pan paniscus]
Length = 197
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 40 QQQNCPVCKANISVASLVPLYGRG 63
++Q CPVCKA IS +VPLYGRG
Sbjct: 97 ERQECPVCKAGISREKVVPLYGRG 120
>gi|384250685|gb|EIE24164.1| ring finger protein 5, partial [Coccomyxa subellipsoidea C-169]
Length = 195
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV-------VPSRP 84
CPVCKA I ++P+YGRGG ++ K +LG VP RP
Sbjct: 72 CPVCKAGIEQDKVIPIYGRGGDNTDPRQKAQSLGNKEEDEDGPVPRRP 119
>gi|242012650|ref|XP_002427042.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212511290|gb|EEB14304.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 178
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG SK+ + VP RP
Sbjct: 59 KQMCPVCKAAISKEKVIPLYGRG------SSKQEDPRNKVPPRP 96
>gi|224125498|ref|XP_002329820.1| predicted protein [Populus trichocarpa]
gi|222870882|gb|EEF08013.1| predicted protein [Populus trichocarpa]
Length = 119
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 129 YGSHAALASS---SLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYP-SQSLLVSN 184
YGS + S +LG P++GM M R++G +P S L+ +
Sbjct: 34 YGSFEEASPSPLLNLGDPTMTGLQQPVVGMFREMVYARVYG-------PFPNSYHLMGTG 86
Query: 185 NPRIRRQEMELDKSLNRVSL 204
+PR+RR E+ DKSLNR+S+
Sbjct: 87 SPRLRRHELMADKSLNRISI 106
>gi|149027949|gb|EDL83400.1| rCG38334, isoform CRA_f [Rattus norvegicus]
Length = 145
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 26 RQECPVCKAGISREKVVPLYGRG 48
>gi|170027947|ref|XP_001841858.1| RING finger protein 185 [Culex quinquefasciatus]
gi|167868328|gb|EDS31711.1| RING finger protein 185 [Culex quinquefasciatus]
Length = 246
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK++IS ++PLYGRGG S D +K P RP
Sbjct: 129 RNTCPVCKSSISKEKVIPLYGRGG--SKEDPRK-----TAPPRP 165
>gi|151301049|ref|NP_001093088.1| ring finger protein 5 [Bombyx mori]
gi|95102656|gb|ABF51266.1| ring finger protein 5 [Bombyx mori]
Length = 184
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG ++K+ + VP RP
Sbjct: 66 RQVCPVCKAAISREKVIPLYGRG------NTKQEDPRNKVPPRP 103
>gi|413949640|gb|AFW82289.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 550
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPN---LGEVVPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG SA + + G +P RPH + L +
Sbjct: 267 HKECPVCKGEVTEGNITPIYGRGNSGSAMEKVAEDGNASGPKIPPRPHGNRLES 320
>gi|15224062|ref|NP_179958.1| ubiquitin-protein ligase RNF5 [Arabidopsis thaliana]
gi|3152606|gb|AAC17085.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|30793869|gb|AAP40387.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|30794130|gb|AAP40507.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|110738895|dbj|BAF01369.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330252396|gb|AEC07490.1| ubiquitin-protein ligase RNF5 [Arabidopsis thaliana]
Length = 227
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + SK+ P L +P+RP
Sbjct: 63 QECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGL--RIPNRP 104
>gi|402591537|gb|EJW85466.1| ring finger protein 5 [Wuchereria bancrofti]
Length = 176
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTST 100
+Q CPVCK+ IS ++PLYGRGG + K P P P T + +S+
Sbjct: 66 RQLCPVCKSAISKDKVIPLYGRGGNDTDPRDKVP---------PRPRGQRTEMPQASSHY 116
Query: 101 RH 102
H
Sbjct: 117 CH 118
>gi|21553849|gb|AAM62942.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 227
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + SK+ P L +P+RP
Sbjct: 63 QECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGL--RIPNRP 104
>gi|340378539|ref|XP_003387785.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Amphimedon
queenslandica]
Length = 196
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCK+ I L+PLYGRG SD K P E +P RP
Sbjct: 62 CPVCKSVIDKEKLIPLYGRG-----SDQKDPR--ESLPPRP 95
>gi|149027946|gb|EDL83397.1| rCG38334, isoform CRA_c [Rattus norvegicus]
Length = 175
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|149027945|gb|EDL83396.1| rCG38334, isoform CRA_b [Rattus norvegicus]
Length = 208
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|148694850|gb|EDL26797.1| ring finger protein 5, isoform CRA_c [Mus musculus]
Length = 177
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 58 RQECPVCKAGISREKVVPLYGRG 80
>gi|357622579|gb|EHJ74006.1| ring finger protein 5 [Danaus plexippus]
Length = 153
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG ++K+ + VP RP
Sbjct: 38 RQVCPVCKAAISREKVIPLYGRG------NTKQEDPRNKVPPRP 75
>gi|82541455|ref|XP_724967.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479801|gb|EAA16532.1| similar to CG8974 gene product-related [Plasmodium yoelii yoelii]
Length = 467
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
+CPVCKA ++ +++PLYGRG ++SD K N E P+
Sbjct: 345 DCPVCKAEVTKENVIPLYGRG--KNSSDHKYSNNEEPRPT 382
>gi|348576436|ref|XP_003473993.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Cavia
porcellus]
Length = 180
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|354492755|ref|XP_003508511.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Cricetulus
griseus]
gi|344239147|gb|EGV95250.1| E3 ubiquitin-protein ligase RNF5 [Cricetulus griseus]
Length = 180
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS ++VPLYGRG
Sbjct: 61 RQECPVCKAGISRDTVVPLYGRG 83
>gi|9507059|ref|NP_062276.1| E3 ubiquitin-protein ligase RNF5 [Mus musculus]
gi|157820431|ref|NP_001102495.1| E3 ubiquitin-protein ligase RNF5 [Rattus norvegicus]
gi|81886622|sp|O35445.1|RNF5_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF5; AltName:
Full=RING finger protein 5
gi|81889130|sp|Q5M807.1|RNF5_RAT RecName: Full=E3 ubiquitin-protein ligase RNF5; AltName:
Full=RING finger protein 5
gi|2564951|gb|AAB82008.1| unknown [Mus musculus]
gi|5578773|emb|CAB51286.1| protein G16 [Homo sapiens]
gi|16741216|gb|AAH16449.1| Ring finger protein 5 [Mus musculus]
gi|56789508|gb|AAH88341.1| Rnf5 protein [Rattus norvegicus]
gi|148694849|gb|EDL26796.1| ring finger protein 5, isoform CRA_b [Mus musculus]
gi|149027948|gb|EDL83399.1| rCG38334, isoform CRA_e [Rattus norvegicus]
Length = 180
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|390343030|ref|XP_785402.2| PREDICTED: E3 ubiquitin-protein ligase RNF185-like
[Strongylocentrotus purpuratus]
Length = 221
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSAL 89
+Q CPVCKA IS ++PLYGRG +++ + P E +P RP L
Sbjct: 101 RQVCPVCKAGISRDKVIPLYGRG----STNQQDPR--EKMPPRPQGERL 143
>gi|312080184|ref|XP_003142492.1| hypothetical protein LOAG_06910 [Loa loa]
Length = 186
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+Q CPVCK+ IS ++PLYGRGG + K P
Sbjct: 63 RQLCPVCKSAISREKVIPLYGRGGNDTDPRDKVP 96
>gi|118488873|gb|ABK96246.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 227
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA I LVPLYGRG + A K G +P+RP
Sbjct: 64 HSHECPVCKAIIQEEKLVPLYGRGK-TQADPRSKSYPGIDIPTRP 107
>gi|344307254|ref|XP_003422297.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Loxodonta
africana]
Length = 180
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|148694848|gb|EDL26795.1| ring finger protein 5, isoform CRA_a [Mus musculus]
Length = 150
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|224136590|ref|XP_002326898.1| predicted protein [Populus trichocarpa]
gi|222835213|gb|EEE73648.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ + CPVCKA + LVPLYGRG S+ SK G +P+RP
Sbjct: 65 KSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKS-IPGVNIPNRP 108
>gi|351713176|gb|EHB16095.1| E3 ubiquitin-protein ligase RNF5 [Heterocephalus glaber]
Length = 180
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS +VPLYGRG
Sbjct: 61 RQECPVCKAGISREKVVPLYGRG 83
>gi|327266660|ref|XP_003218122.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Anolis
carolinensis]
Length = 181
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +S + P L P RP
Sbjct: 63 DRQECPVCKAGISRDKVIPLYGRG----SSAQEDPRL--KTPPRPR 102
>gi|167537902|ref|XP_001750618.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770914|gb|EDQ84591.1| predicted protein [Monosiga brevicollis MX1]
Length = 1573
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 73 KPNLGEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSH 132
KP G VPS P+P+AL S+TS+RH + H F+ + P+ P
Sbjct: 807 KPRAGTAVPSDPNPTALGIYEVPSNTSSRHDS---HQSSFRGETPSPSRPVLSSRKASVD 863
Query: 133 AALASSSLGGMATISFFNPLMG--MLGGMTLE 162
A + +L G + P +G M+GGM E
Sbjct: 864 ATVPEEALYGDPALG-IQPNLGNDMVGGMDAE 894
>gi|17554742|ref|NP_497830.1| Protein RNF-5 [Caenorhabditis elegans]
gi|2501735|sp|Q09463.1|RNF5_CAEEL RecName: Full=RING finger protein 5
gi|3874385|emb|CAA86745.1| Protein RNF-5 [Caenorhabditis elegans]
Length = 235
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSAL 89
Q CPVCK+ I +VP+YGRGG SS K P + S P P +
Sbjct: 61 QVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPPQSF 108
>gi|302760553|ref|XP_002963699.1| hypothetical protein SELMODRAFT_69516 [Selaginella
moellendorffii]
gi|302786036|ref|XP_002974789.1| hypothetical protein SELMODRAFT_59572 [Selaginella
moellendorffii]
gi|300157684|gb|EFJ24309.1| hypothetical protein SELMODRAFT_59572 [Selaginella
moellendorffii]
gi|300168967|gb|EFJ35570.1| hypothetical protein SELMODRAFT_69516 [Selaginella
moellendorffii]
Length = 127
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCK+ + A ++P+YGRG SD +K + E +P+RP
Sbjct: 46 CPVCKSAVEEAKVIPIYGRG--KGTSDPRKKGV-ENIPNRP 83
>gi|297825287|ref|XP_002880526.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297326365|gb|EFH56785.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 226
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + SK+ P L +P+RP
Sbjct: 63 QECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGL--RIPNRP 104
>gi|313232114|emb|CBY09225.1| unnamed protein product [Oikopleura dioica]
Length = 184
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPS 87
Q+Q CPVCKA I +VP+YG G SD + N +P RP S
Sbjct: 59 QKQECPVCKAGIGKDKMVPIYGHG--QEQSDPRTRN----IPPRPQGS 100
>gi|15227484|ref|NP_181733.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|1871181|gb|AAB63541.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|16648814|gb|AAL25597.1| At2g42030/T6D20.8 [Arabidopsis thaliana]
gi|18175852|gb|AAL59939.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|20465663|gb|AAM20300.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330254970|gb|AEC10064.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 425
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+ + CPVCK +SV ++ P+YGR GI + N +PSRP
Sbjct: 173 EAKECPVCKGEVSVKTVTPIYGR-GIQKRESEEVSNTK--IPSRPQ 215
>gi|383852264|ref|XP_003701648.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Megachile
rotundata]
Length = 182
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +++ + VP RP
Sbjct: 64 KQTCPVCKAAISKDKVIPLYGRGA------TRQEDPRNNVPPRP 101
>gi|297827871|ref|XP_002881818.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327657|gb|EFH58077.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+ + CPVCK +SV ++ P+YGRG S+ +PSRP
Sbjct: 166 EAKECPVCKGEVSVKTVTPIYGRGKQKRESEEVS---NTKIPSRPQ 208
>gi|148886646|ref|NP_001092153.1| ring finger protein 5, E3 ubiquitin protein ligase [Xenopus
laevis]
gi|146327077|gb|AAI41717.1| LOC100049739 protein [Xenopus laevis]
Length = 168
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
++Q CPVCKA +S ++P+YGRG + K P L P RP
Sbjct: 47 ERQECPVCKAGVSREKVIPIYGRG----DGNQKDPRLK--TPPRPQ 86
>gi|225458396|ref|XP_002283534.1| PREDICTED: uncharacterized protein LOC100259073 isoform 4 [Vitis
vinifera]
Length = 171
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG S+ SK G +P+RP
Sbjct: 9 CPVCKALVEEEKLVPLYGRGKTSTDPRSKS-IPGINIPNRP 48
>gi|221057788|ref|XP_002261402.1| c3h4-type ring finger protein [Plasmodium knowlesi strain H]
gi|194247407|emb|CAQ40807.1| c3h4-type ring finger protein, putative [Plasmodium knowlesi strain
H]
Length = 513
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISS 67
++ +CPVCKA +S +++PLYGRG S+
Sbjct: 387 KKNNDCPVCKAEVSRENVIPLYGRGKNST 415
>gi|68070983|ref|XP_677405.1| c3h4-type ring finger protein [Plasmodium berghei strain ANKA]
gi|56497513|emb|CAH95476.1| c3h4-type ring finger protein, putative [Plasmodium berghei]
Length = 223
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 82
+CPVCKA ++ +++PLYGRG ++SD K N E P+
Sbjct: 105 DCPVCKAEVTKENVIPLYGRG--KNSSDHKYSNNEEPRPT 142
>gi|388501878|gb|AFK39005.1| unknown [Medicago truncatula]
Length = 276
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSK-KPNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + +D + K G +P RP
Sbjct: 72 QECPVCKALVQEEKLVPLYGRG--KTQTDPRTKSYPGMEIPRRP 113
>gi|70952403|ref|XP_745372.1| c3h4-type ring finger protein [Plasmodium chabaudi chabaudi]
gi|56525674|emb|CAH88108.1| c3h4-type ring finger protein, putative [Plasmodium chabaudi
chabaudi]
Length = 209
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISS 67
++ +CPVCKA ++ +++PLYGRG SS
Sbjct: 83 KKNNDCPVCKAEVTKENVIPLYGRGKNSS 111
>gi|52345564|ref|NP_001004830.1| ring finger protein 185 [Xenopus (Silurana) tropicalis]
gi|49250847|gb|AAH74621.1| MGC69334 protein [Xenopus (Silurana) tropicalis]
Length = 144
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 26 RQVCPVCKAGISREKVIPLYGRGSTGQEDPREK------TPPRPQ 64
>gi|242034925|ref|XP_002464857.1| hypothetical protein SORBIDRAFT_01g027700 [Sorghum bicolor]
gi|241918711|gb|EER91855.1| hypothetical protein SORBIDRAFT_01g027700 [Sorghum bicolor]
Length = 435
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+ CPVCK ++ +++P+YGRGG +++ ++ P
Sbjct: 166 HHRECPVCKGQVADDAIIPIYGRGGSAASVNNAPP 200
>gi|126644142|ref|XP_001388207.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117280|gb|EAZ51380.1| hypothetical protein cgd2_1820 [Cryptosporidium parvum Iowa II]
Length = 200
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
D ++CPVCKA ++ +++PLYGRG + D +K ++P P A
Sbjct: 71 DRGYEDCPVCKAGVNSENVIPLYGRG--NENVDPRK-------KTKPRPKA-----ERPE 116
Query: 98 TSTRHQTQQLHSDFFQSQAPAF 119
R+Q H+ +F + F
Sbjct: 117 ARQRNQNIGGHNGYFHNADFGF 138
>gi|344251011|gb|EGW07115.1| RING finger protein 185 [Cricetulus griseus]
Length = 134
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 15 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 53
>gi|301133554|gb|ADK63399.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 227
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + +K+ G +P+RP
Sbjct: 59 HSQECPVCKALVQDDKLVPLYGRGKNQTDPRTKR-YPGMRIPNRP 102
>gi|170596484|ref|XP_001902780.1| Hypothetical RING finger protein C16C10.7 in chromosome III,
putative [Brugia malayi]
gi|158589327|gb|EDP28370.1| Hypothetical RING finger protein C16C10.7 in chromosome III,
putative [Brugia malayi]
Length = 159
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+Q CPVCK+ IS ++PLYGRGG + K P
Sbjct: 37 RQLCPVCKSAISKDKVIPLYGRGGNDTDPRDKVP 70
>gi|156542753|ref|XP_001600631.1| PREDICTED: RING finger protein 185-like [Nasonia vitripennis]
Length = 184
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +K+ + VP RP
Sbjct: 64 RQVCPVCKAAISKEKVIPLYGRGA------TKQEDPRNNVPPRP 101
>gi|388548524|gb|AFK65745.1| C3HC4 transcription factor [Gossypium hirsutum]
Length = 236
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
+ Q CPVCKA + L PLYGRG S++D + ++ G +P+RP
Sbjct: 65 RSQECPVCKALVEEQKLAPLYGRG--KSSTDPRSKSIPGVNIPNRP 108
>gi|326531740|dbj|BAJ97874.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKK-----PNLGEVVPSRPHPSALNT 91
+ CPVCK ++ A++ P+YG G +S SD++K G +P RPH + L +
Sbjct: 275 HKECPVCKGEVTEANITPIYGSRG-NSCSDAEKAVEEGKQTGLTIPPRPHGNRLES 329
>gi|357483249|ref|XP_003611911.1| RING finger protein [Medicago truncatula]
gi|355513246|gb|AES94869.1| RING finger protein [Medicago truncatula]
Length = 239
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSK-KPNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + +D + K G +P RP
Sbjct: 72 QECPVCKALVQEEKLVPLYGRG--KTQTDPRTKSYPGMEIPRRP 113
>gi|449466743|ref|XP_004151085.1| PREDICTED: uncharacterized protein LOC101212429 [Cucumis sativus]
gi|449501587|ref|XP_004161409.1| PREDICTED: uncharacterized protein LOC101226819 [Cucumis sativus]
Length = 451
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNT 91
+ CP C+ ++ S++P+YG G + A SK + G VP RP + +
Sbjct: 173 KECPECQGEVTDTSIIPIYGHGNGNRAQKSKPNDSGLKVPPRPRAQRIES 222
>gi|255585132|ref|XP_002533271.1| rnf5, putative [Ricinus communis]
gi|223526896|gb|EEF29103.1| rnf5, putative [Ricinus communis]
Length = 233
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA I LVPLYGRG + SK G +P RP
Sbjct: 67 HSHECPVCKALIQEEKLVPLYGRGKTQTDPRSKS-YPGVDIPRRP 110
>gi|47223648|emb|CAF99257.1| unnamed protein product [Tetraodon nigroviridis]
Length = 191
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 72 RQVCPVCKAGISREKVIPLYGRG----STGQQDPR--EKTPPRPQ 110
>gi|149047505|gb|EDM00175.1| similar to 1700022N24Rik protein, isoform CRA_b [Rattus
norvegicus]
Length = 148
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKK 73
+Q CPVCKA IS ++PLYGRG +K
Sbjct: 29 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK 61
>gi|431920914|gb|ELK18685.1| RING finger protein 185 [Pteropus alecto]
Length = 218
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 99 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 137
>gi|332024039|gb|EGI64257.1| RING finger protein 185 [Acromyrmex echinatior]
Length = 184
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +K + VP RP
Sbjct: 66 RQVCPVCKAAISKDKVIPLYGRGA------AKHEDPRNNVPPRP 103
>gi|417396337|gb|JAA45202.1| Putative ring finger protein [Desmodus rotundus]
Length = 158
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 39 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 77
>gi|326526423|dbj|BAJ97228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 234
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK G +P RP
Sbjct: 62 CPVCKAVVEEDKLVPLYGRGKDRVDPRSKGVPPGAEIPHRP 102
>gi|414869118|tpg|DAA47675.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414869119|tpg|DAA47676.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 241
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK +PSRP
Sbjct: 64 CPVCKAVVEEEKLVPLYGRGKDRVDPRSKNVPGAADIPSRP 104
>gi|226500984|ref|NP_001150153.1| RING finger protein 5 [Zea mays]
gi|195637172|gb|ACG38054.1| RING finger protein 5 [Zea mays]
Length = 243
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK +PSRP
Sbjct: 66 CPVCKAVVEEEKLVPLYGRGKDRVDPRSKNVPGAADIPSRP 106
>gi|221481984|gb|EEE20350.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 495
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASD-SKKPNLGEVV 80
CPVCKA+ +V +++P+YGRG D S+ N G VV
Sbjct: 384 CPVCKAHTTVRNVIPIYGRGAEKHPRDASETGNSGYVV 421
>gi|125545235|gb|EAY91374.1| hypothetical protein OsI_12994 [Oryza sativa Indica Group]
Length = 233
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV-VPSRP 84
CPVCKA + LVPLYGRG D + N+ E +P+RP
Sbjct: 61 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNIPEADIPNRP 100
>gi|109093966|ref|XP_001110905.1| PREDICTED: RING finger protein 185-like [Macaca mulatta]
Length = 143
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 24 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 62
>gi|326487408|dbj|BAJ89688.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506200|dbj|BAJ86418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 234
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK G +P RP
Sbjct: 62 CPVCKAVVEEDKLVPLYGRGKDRVDPRSKGVPPGAEIPHRP 102
>gi|221505057|gb|EEE30711.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 485
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASD-SKKPNLGEVV 80
CPVCKA+ +V +++P+YGRG D S+ N G VV
Sbjct: 373 ECPVCKAHTTVRNVIPIYGRGAEKHPRDASETGNSGYVV 411
>gi|119580347|gb|EAW59943.1| ring finger protein 185, isoform CRA_a [Homo sapiens]
Length = 188
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 69 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 107
>gi|115454583|ref|NP_001050892.1| Os03g0678400 [Oryza sativa Japonica Group]
gi|29150403|gb|AAO72412.1| unknown protein [Oryza sativa Japonica Group]
gi|108710391|gb|ABF98186.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|108710392|gb|ABF98187.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113549363|dbj|BAF12806.1| Os03g0678400 [Oryza sativa Japonica Group]
gi|125587463|gb|EAZ28127.1| hypothetical protein OsJ_12099 [Oryza sativa Japonica Group]
gi|215696970|dbj|BAG90964.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV-VPSRP 84
CPVCKA + LVPLYGRG D + N+ E +P+RP
Sbjct: 61 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNIPEADIPNRP 100
>gi|148708473|gb|EDL40420.1| ring finger protein 185, isoform CRA_e [Mus musculus]
Length = 150
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKK 73
+Q CPVCKA IS ++PLYGRG +K
Sbjct: 31 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK 63
>gi|147903879|ref|NP_001088405.1| ring finger protein 185 [Xenopus laevis]
gi|54261639|gb|AAH84303.1| LOC495261 protein [Xenopus laevis]
Length = 189
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 71 RQVCPVCKAGISREKVIPLYGRGSTGQEDPREK------TPPRPQ 109
>gi|57526717|ref|NP_998202.1| E3 ubiquitin-protein ligase RNF185 [Danio rerio]
gi|82202590|sp|Q6PC78.1|RN185_DANRE RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|37590321|gb|AAH59445.1| Zgc:73070 [Danio rerio]
Length = 194
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 75 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 113
>gi|268575100|ref|XP_002642529.1| C. briggsae CBR-RNF-5 protein [Caenorhabditis briggsae]
Length = 241
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
Q CPVCK+ I +VP+YGRGG ++ +K P
Sbjct: 62 QVCPVCKSAIDGTKVVPIYGRGGDTTDPRTKIP 94
>gi|255644744|gb|ACU22874.1| unknown [Glycine max]
Length = 205
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
Q CPVCKA + LVPLYGRG + +K G +P RP
Sbjct: 66 QECPVCKALVQEEKLVPLYGRGKTQTDPRTKS-YPGMEIPHRP 107
>gi|148228348|ref|NP_001086235.1| MGC84239 protein [Xenopus laevis]
gi|49258044|gb|AAH74361.1| MGC84239 protein [Xenopus laevis]
Length = 189
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 71 RQVCPVCKAGISREKVIPLYGRGSTGQEDPREK------TPPRPQ 109
>gi|89269933|emb|CAJ81763.1| ring finger protein 125 [Xenopus (Silurana) tropicalis]
Length = 189
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 71 RQVCPVCKAGISREKVIPLYGRGSTGQEDPREK------TPPRPQ 109
>gi|410904121|ref|XP_003965541.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Takifugu
rubripes]
Length = 193
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 74 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 112
>gi|395517385|ref|XP_003762857.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 1
[Sarcophilus harrisii]
Length = 192
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|355716850|gb|AES05745.1| ring finger protein 185 [Mustela putorius furo]
Length = 75
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 12 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 50
>gi|307207349|gb|EFN85099.1| RING finger protein 185 [Harpegnathos saltator]
Length = 182
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++PLYGRG +K + VP RP
Sbjct: 64 RQVCPVCKAAISKDKVIPLYGRGA------TKHEDPRNNVPPRP 101
>gi|322785095|gb|EFZ11828.1| hypothetical protein SINV_15927 [Solenopsis invicta]
Length = 93
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 41 QQNCPVCKANISVASLVPLYGRGG 64
+Q CPVCKA IS ++PLYGRG
Sbjct: 61 RQVCPVCKAAISKDKVIPLYGRGA 84
>gi|240848615|ref|NP_001155711.1| ring finger protein 5-like [Acyrthosiphon pisum]
gi|239793597|dbj|BAH72908.1| ACYPI007387 [Acyrthosiphon pisum]
Length = 182
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA IS ++P+YGRG ++K+ + VP RP
Sbjct: 66 RQVCPVCKAVISKDKVIPIYGRG------NTKQEDPRNKVPPRP 103
>gi|149641026|ref|XP_001505788.1| PREDICTED: RING finger protein 185-like isoform 1 [Ornithorhynchus
anatinus]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|237836987|ref|XP_002367791.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211965455|gb|EEB00651.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 484
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASD-SKKPNLGEVV 80
CPVCKA+ +V +++P+YGRG D S+ N G VV
Sbjct: 372 ECPVCKAHTTVRNVIPIYGRGAEKHPRDASETGNSGYVV 410
>gi|348585181|ref|XP_003478350.1| PREDICTED: RING finger protein 185-like [Cavia porcellus]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|344294799|ref|XP_003419103.1| PREDICTED: RING finger protein 185-like isoform 1 [Loxodonta
africana]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|350538121|ref|NP_001232319.1| uncharacterized protein LOC100190044 [Taeniopygia guttata]
gi|197127274|gb|ACH43772.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
gi|197127275|gb|ACH43773.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
gi|197127276|gb|ACH43774.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
Length = 194
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 75 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 113
>gi|354494444|ref|XP_003509347.1| PREDICTED: RING finger protein 185-like [Cricetulus griseus]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|296191693|ref|XP_002743736.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Callithrix jacchus]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|66730362|ref|NP_001019442.1| E3 ubiquitin-protein ligase RNF185 [Rattus norvegicus]
gi|81888056|sp|Q568Y3.1|RN185_RAT RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|62203106|gb|AAH92655.1| Ring finger protein 185 [Rattus norvegicus]
gi|149047504|gb|EDM00174.1| similar to 1700022N24Rik protein, isoform CRA_a [Rattus norvegicus]
Length = 192
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|449281587|gb|EMC88634.1| RING finger protein 185 [Columba livia]
Length = 194
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 75 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 113
>gi|139948903|ref|NP_001077172.1| RING finger protein 185 [Bos taurus]
gi|134024567|gb|AAI34509.1| RNF185 protein [Bos taurus]
gi|296478379|tpg|DAA20494.1| TPA: ring finger protein 185 [Bos taurus]
gi|440894634|gb|ELR47040.1| RING finger protein 185 [Bos grunniens mutus]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|197099306|ref|NP_001124620.1| E3 ubiquitin-protein ligase RNF185 [Pongo abelii]
gi|75062067|sp|Q5RFK9.1|RN185_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|55725163|emb|CAH89448.1| hypothetical protein [Pongo abelii]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|209732308|gb|ACI67023.1| RING finger protein 185 [Salmo salar]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISREKVIPLYGRG----STGQQDPR--ERTPPRPQ 111
>gi|31542783|ref|NP_689480.2| E3 ubiquitin-protein ligase RNF185 isoform 1 [Homo sapiens]
gi|55661012|ref|XP_515084.1| PREDICTED: uncharacterized protein LOC458768 isoform 8 [Pan
troglodytes]
gi|73995053|ref|XP_852634.1| PREDICTED: RING finger protein 185 isoform 2 [Canis lupus
familiaris]
gi|114685924|ref|XP_001145985.1| PREDICTED: uncharacterized protein LOC458768 isoform 3 [Pan
troglodytes]
gi|194043264|ref|XP_001925859.1| PREDICTED: RING finger protein 185 isoform 1 [Sus scrofa]
gi|301759511|ref|XP_002915600.1| PREDICTED: RING finger protein 185-like [Ailuropoda melanoleuca]
gi|332218011|ref|XP_003258153.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus leucogenys]
gi|332218013|ref|XP_003258154.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus leucogenys]
gi|397513340|ref|XP_003826976.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Pan paniscus]
gi|410976919|ref|XP_003994860.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Felis catus]
gi|426394180|ref|XP_004063379.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|426394184|ref|XP_004063381.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|426394186|ref|XP_004063382.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|441619065|ref|XP_004088551.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus leucogenys]
gi|74751883|sp|Q96GF1.1|RN185_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|14550508|gb|AAH09504.1| RNF185 protein [Homo sapiens]
gi|23272798|gb|AAH35684.1| Ring finger protein 185 [Homo sapiens]
gi|45708382|gb|AAH12817.1| RNF185 protein [Homo sapiens]
gi|45708658|gb|AAH26040.1| Ring finger protein 185 [Homo sapiens]
gi|45708732|gb|AAH33166.1| Ring finger protein 185 [Homo sapiens]
gi|47678229|emb|CAG30235.1| Em:AC005005.6 [Homo sapiens]
gi|83265412|gb|ABB97506.1| BSK65-MONO1 [Homo sapiens]
gi|83265416|gb|ABB97508.1| BSK65-PANC1 [Homo sapiens]
gi|83265424|gb|ABB97512.1| BSK65-TEST3 [Homo sapiens]
gi|109451258|emb|CAK54490.1| RNF185 [synthetic construct]
gi|109451836|emb|CAK54789.1| RNF185 [synthetic construct]
gi|119580351|gb|EAW59947.1| ring finger protein 185, isoform CRA_e [Homo sapiens]
gi|119580355|gb|EAW59951.1| ring finger protein 185, isoform CRA_e [Homo sapiens]
gi|158255908|dbj|BAF83925.1| unnamed protein product [Homo sapiens]
gi|184185467|gb|ACC68871.1| ring finger protein 185 (predicted) [Rhinolophus ferrumequinum]
gi|261859730|dbj|BAI46387.1| ring finger protein 185 [synthetic construct]
gi|281350120|gb|EFB25704.1| hypothetical protein PANDA_003609 [Ailuropoda melanoleuca]
gi|410213080|gb|JAA03759.1| ring finger protein 185 [Pan troglodytes]
gi|410258842|gb|JAA17388.1| ring finger protein 185 [Pan troglodytes]
gi|410302724|gb|JAA29962.1| ring finger protein 185 [Pan troglodytes]
gi|410333985|gb|JAA35939.1| ring finger protein 185 [Pan troglodytes]
gi|432105167|gb|ELK31536.1| RING finger protein 185 [Myotis davidii]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|417408544|gb|JAA50818.1| Putative ring finger protein 185, partial [Desmodus rotundus]
Length = 195
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 76 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 114
>gi|403295055|ref|XP_003938470.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Saimiri boliviensis
boliviensis]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|351703838|gb|EHB06757.1| RING finger protein 185 [Heterocephalus glaber]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|334327453|ref|XP_001378580.2| PREDICTED: RING finger protein 185-like [Monodelphis domestica]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|426394182|ref|XP_004063380.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|441619068|ref|XP_004088552.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus leucogenys]
gi|83265422|gb|ABB97511.1| BSK65-TEST2 [Homo sapiens]
Length = 157
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|149720261|ref|XP_001497369.1| PREDICTED: RING finger protein 185-like isoform 1 [Equus caballus]
Length = 192
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|159466950|ref|XP_001691661.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279007|gb|EDP04769.1| predicted protein [Chlamydomonas reinhardtii]
Length = 95
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGG--ISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + V +VP+YGRG S+ ++ KP VP RP
Sbjct: 43 RACPVCKAGVEVDKVVPIYGRGSELASTVQEAVKP-----VPPRP 82
>gi|56119056|ref|NP_001007841.1| E3 ubiquitin-protein ligase RNF185 [Gallus gallus]
gi|326929873|ref|XP_003211078.1| PREDICTED: RING finger protein 185-like [Meleagris gallopavo]
gi|82197755|sp|Q5ZIR9.1|RN185_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|53134896|emb|CAG32374.1| hypothetical protein RCJMB04_23p11 [Gallus gallus]
Length = 194
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 75 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 113
>gi|426247529|ref|XP_004017537.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 1 [Ovis
aries]
gi|426247531|ref|XP_004017538.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 2 [Ovis
aries]
Length = 192
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|410055812|ref|XP_003953920.1| PREDICTED: uncharacterized protein LOC458768 [Pan troglodytes]
Length = 157
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|399218267|emb|CCF75154.1| unnamed protein product [Babesia microti strain RI]
Length = 207
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSS 97
D CP+CK+ ++ +++PLYGRG ++D +K +RP P S
Sbjct: 51 DRNMNECPLCKSEVTRDNVIPLYGRG--CDSTDPRK-------STRPKPKT--ERAKPSG 99
Query: 98 TSTRHQTQQLHSD 110
++ R+ TQ + +
Sbjct: 100 SANRNATQSIFGN 112
>gi|388498740|gb|AFK37436.1| unknown [Lotus japonicus]
Length = 446
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 42 QNCPVCKANISVASLVPLYGRG--GISSASDS 71
+ CPVCK +++ S+ P+YGRG G SS DS
Sbjct: 195 KECPVCKGEVTLKSVTPIYGRGNNGRSSEEDS 226
>gi|326497735|dbj|BAK05957.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 462
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+ CPVCK ++ +++P+YGRGG +++ + P
Sbjct: 196 HRECPVCKGQVADDAIIPIYGRGGSAASVQAAPP 229
>gi|326501452|dbj|BAK02515.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 462
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+ CPVCK ++ +++P+YGRGG +++ + P
Sbjct: 196 HRECPVCKGQVADDAIIPIYGRGGSAASVQAAPP 229
>gi|22331846|ref|NP_191362.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42572715|ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42572717|ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186074|ref|NP_001190122.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|19698885|gb|AAL91178.1| putative protein [Arabidopsis thaliana]
gi|30387527|gb|AAP31929.1| At3g58030 [Arabidopsis thaliana]
gi|332646210|gb|AEE79731.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646211|gb|AEE79732.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646212|gb|AEE79733.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646213|gb|AEE79734.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 436
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 42 QNCPVCKANISVASLVPLYGRGG----ISSASDSKKPNLGEVVPSRPH 85
+ CPVCK ++ ++ P+YGRG I + D+K VP RPH
Sbjct: 173 KECPVCKGEVTSKTVTPIYGRGNHKREIEESLDTK-------VPMRPH 213
>gi|81916260|sp|Q91YT2.1|RN185_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|15928691|gb|AAH14812.1| Rnf185 protein [Mus musculus]
gi|26342665|dbj|BAC34989.1| unnamed protein product [Mus musculus]
gi|26343409|dbj|BAC35361.1| unnamed protein product [Mus musculus]
gi|26344570|dbj|BAC35934.1| unnamed protein product [Mus musculus]
gi|26346534|dbj|BAC36918.1| unnamed protein product [Mus musculus]
gi|74139095|dbj|BAE38444.1| unnamed protein product [Mus musculus]
gi|74195444|dbj|BAE39541.1| unnamed protein product [Mus musculus]
gi|74203994|dbj|BAE29001.1| unnamed protein product [Mus musculus]
gi|74223162|dbj|BAE40718.1| unnamed protein product [Mus musculus]
gi|148708469|gb|EDL40416.1| ring finger protein 185, isoform CRA_a [Mus musculus]
Length = 192
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--EKTPPRPQ 111
>gi|225706568|gb|ACO09130.1| RING finger protein 185 [Osmerus mordax]
Length = 191
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 72 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--ERTPPRPQ 110
>gi|395862272|ref|XP_003803385.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Otolemur garnettii]
Length = 192
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--EKTPPRPQ 111
>gi|383412555|gb|AFH29491.1| RING finger protein 185 isoform 1 [Macaca mulatta]
Length = 192
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--EKTPPRPQ 111
>gi|402884035|ref|XP_003905499.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Papio anubis]
gi|355563596|gb|EHH20158.1| hypothetical protein EGK_02953 [Macaca mulatta]
gi|355784916|gb|EHH65767.1| hypothetical protein EGM_02600 [Macaca fascicularis]
gi|380788253|gb|AFE66002.1| E3 ubiquitin-protein ligase RNF185 isoform 1 [Macaca mulatta]
Length = 192
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--EKTPPRPQ 111
>gi|387018150|gb|AFJ51193.1| RING finger protein 185 [Crotalus adamanteus]
Length = 191
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 72 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 110
>gi|357136607|ref|XP_003569895.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like [Brachypodium
distachyon]
Length = 220
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRHQ 103
CPV KA + LVPLYGR S+ S S+ G +P RP T ST Q
Sbjct: 60 CPVWKAGVQEEKLVPLYGRCKASTGSRSRS-VAGVQIPGRP---------TGQRHSTAPQ 109
Query: 104 TQQLHSDFFQSQAPAF 119
H D + +Q P F
Sbjct: 110 PDHRH-DHYPNQNPWF 124
>gi|242038561|ref|XP_002466675.1| hypothetical protein SORBIDRAFT_01g012070 [Sorghum bicolor]
gi|241920529|gb|EER93673.1| hypothetical protein SORBIDRAFT_01g012070 [Sorghum bicolor]
Length = 229
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|115489748|ref|NP_001067361.1| Os12g0636000 [Oryza sativa Japonica Group]
gi|77557173|gb|ABA99969.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113649868|dbj|BAF30380.1| Os12g0636000 [Oryza sativa Japonica Group]
gi|215692787|dbj|BAG88224.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704538|dbj|BAG94171.1| unnamed protein product [Oryza sativa Japonica Group]
gi|347737176|gb|AEP20542.1| zinc finger C3H4 type protein [Oryza sativa Japonica Group]
Length = 234
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
CPVCKA + LVPLYGRG D + N+ G +P+RP
Sbjct: 62 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNVPGADIPNRP 101
>gi|6729546|emb|CAB67631.1| putative protein [Arabidopsis thaliana]
Length = 428
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 42 QNCPVCKANISVASLVPLYGRGG----ISSASDSKKPNLGEVVPSRPH 85
+ CPVCK ++ ++ P+YGRG I + D+K VP RPH
Sbjct: 165 KECPVCKGEVTSKTVTPIYGRGNHKREIEESLDTK-------VPMRPH 205
>gi|242247441|ref|NP_001156217.1| ring finger protein 5-like [Acyrthosiphon pisum]
gi|239791953|dbj|BAH72376.1| ACYPI006552 [Acyrthosiphon pisum]
Length = 183
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+Q CPVCKA I+ ++P+YGRG +SK+ + VP RP
Sbjct: 66 RQVCPVCKAVINKDKVIPIYGRG------NSKQEDPRNKVPPRP 103
>gi|432885964|ref|XP_004074838.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Oryzias
latipes]
Length = 192
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG ++ + P E P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG----STGQQDPR--ERTPPRPQ 111
>gi|303287142|ref|XP_003062860.1| histone ubiquitination protein [Micromonas pusilla CCMP1545]
gi|226455496|gb|EEH52799.1| histone ubiquitination protein [Micromonas pusilla CCMP1545]
Length = 257
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ Q CPVCKA + ++PLYGRG +S D + L VP RP
Sbjct: 135 EAQLCPVCKAGVCEELVIPLYGRG--TSGEDPRHKKLD--VPMRP 175
>gi|31981757|ref|NP_663330.2| E3 ubiquitin-protein ligase RNF185 [Mus musculus]
gi|26329701|dbj|BAC28589.1| unnamed protein product [Mus musculus]
gi|148708470|gb|EDL40417.1| ring finger protein 185, isoform CRA_b [Mus musculus]
Length = 228
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 109 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 147
>gi|156373172|ref|XP_001629407.1| predicted protein [Nematostella vectensis]
gi|156216407|gb|EDO37344.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
CPVCKA IS ++PL+GRG SS D + E +P RP
Sbjct: 72 CPVCKAGISKEKVIPLFGRGS-SSNQDPR-----EKMPPRPQ 107
>gi|119580348|gb|EAW59944.1| ring finger protein 185, isoform CRA_b [Homo sapiens]
Length = 128
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|196011032|ref|XP_002115380.1| hypothetical protein TRIADDRAFT_50677 [Trichoplax adhaerens]
gi|190582151|gb|EDV22225.1| hypothetical protein TRIADDRAFT_50677 [Trichoplax adhaerens]
Length = 186
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNT 91
CPVCKA IS ++PLYGRG + K P P PS + +
Sbjct: 74 CPVCKAAISRDKVIPLYGRGCANQDPREKTP---------PRPSGIRS 112
>gi|21912604|emb|CAD21557.1| putative ubiquitin ligase [Taenia solium]
Length = 187
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
CPVCKA +S S++PLYGRG A + P VP RP
Sbjct: 90 CPVCKAAVSRDSVIPLYGRG----ADHKRDPR--NKVPPRPQ 125
>gi|255564084|ref|XP_002523040.1| rnf5, putative [Ricinus communis]
gi|223537723|gb|EEF39344.1| rnf5, putative [Ricinus communis]
Length = 424
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
D + CPVCK I++ ++ P+YGRG S + +L +P RP
Sbjct: 169 DSDSKECPVCKEEITIKNVTPIYGRG---SNARKTPEDLNIQIPLRPQ 213
>gi|224028825|gb|ACN33488.1| unknown [Zea mays]
Length = 550
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEV----VPSRPHPSALNT 91
+ CPVCK ++ ++ P+YGRG S + K G+ +P PH + L +
Sbjct: 267 HKECPVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKASGPKIPPGPHGNRLES 321
>gi|195627718|gb|ACG35689.1| RING finger protein 5 [Zea mays]
Length = 236
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|413933438|gb|AFW67989.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 302
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 128 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 168
>gi|119580350|gb|EAW59946.1| ring finger protein 185, isoform CRA_d [Homo sapiens]
Length = 163
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++PLYGRG +K P RP
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQ 111
>gi|219362553|ref|NP_001137076.1| uncharacterized protein LOC100217249 [Zea mays]
gi|194698250|gb|ACF83209.1| unknown [Zea mays]
gi|195657865|gb|ACG48400.1| RING finger protein 5 [Zea mays]
gi|414871956|tpg|DAA50513.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 230
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|195613278|gb|ACG28469.1| RING finger protein 5 [Zea mays]
Length = 234
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|328772255|gb|EGF82293.1| hypothetical protein BATDEDRAFT_86096 [Batrachochytrium
dendrobatidis JAM81]
Length = 297
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + ++P+Y RG + K P + + VP+RP
Sbjct: 168 CPVCKAGVDRDKVIPIYVRG-----REPKDPRVSKEVPNRP 203
>gi|297817140|ref|XP_002876453.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322291|gb|EFH52712.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 437
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 42 QNCPVCKANISVASLVPLYGRGG----ISSASDSKKPNLGEVVPSRPH 85
+ CPVCK ++ ++ P+YGRG I + D+K +P RPH
Sbjct: 173 KECPVCKGEVTSKTVTPIYGRGNHKREIEESLDTK-------IPMRPH 213
>gi|195617456|gb|ACG30558.1| RING finger protein 5 [Zea mays]
Length = 236
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|222617537|gb|EEE53669.1| hypothetical protein OsJ_36994 [Oryza sativa Japonica Group]
Length = 302
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
CPVCKA + LVPLYGRG D + N+ G +P+RP
Sbjct: 130 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNVPGADIPNRP 169
>gi|212720817|ref|NP_001131836.1| uncharacterized protein LOC100193211 [Zea mays]
gi|194692676|gb|ACF80422.1| unknown [Zea mays]
Length = 234
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK GE +P RP
Sbjct: 60 ECPVCKALVEEDKLVPLYGRGKDRVDPRSKNMPEGE-IPHRP 100
>gi|224091605|ref|XP_002309298.1| predicted protein [Populus trichocarpa]
gi|222855274|gb|EEE92821.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
+ CPVCK +++ ++ P+YGR G ++ + NL +P RPH + + T++R
Sbjct: 177 KECPVCKGEVTMKNVTPIYGR-GCTTREPEEDTNL--EIPVRPHARRVE---SLRQTASR 230
Query: 102 H 102
H
Sbjct: 231 H 231
>gi|218187312|gb|EEC69739.1| hypothetical protein OsI_39260 [Oryza sativa Indica Group]
Length = 304
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
CPVCKA + LVPLYGRG D + N+ G +P+RP
Sbjct: 132 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNVPGADIPNRP 171
>gi|29841097|gb|AAP06110.1| similar to GenBank Accession Number AJ428489 putative ubiquitin
ligase in Taenia solium [Schistosoma japonicum]
Length = 221
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
E + CPVCKA IS ++PLYGRG A ++ P +P RP
Sbjct: 81 ESRTVCPVCKAAISSDKVIPLYGRG----ADHTQDPR--TKIPPRP 120
>gi|452821398|gb|EME28429.1| E3 ubiquitin-protein ligase RNF5 [Galdieria sulphuraria]
Length = 239
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP-HPSALNTSVTSSSTSTR 101
+CP+CK++I ++P+YGR G K V+P P PS T + SS++++
Sbjct: 90 SCPLCKSSIEKDKIIPIYGRNGQDQVDPRTK-----VIPDIPARPSGQRTELPRSSSTSQ 144
Query: 102 HQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGMLGGMTL 161
F S F+ ++P G ++ S G ++S F P + G
Sbjct: 145 SSGGGA----FHSPHSPFYGSPFYP---GPFSSPVHHSNFGPFSVSAFGPFPSLFGLQ-- 195
Query: 162 ERIFGGSTTSLFTY-PSQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLL 216
FTY P QS + P +E ++R+ L + ++LCLL
Sbjct: 196 -----------FTYPPPQS--TGSVPETMTEEQANQAFVSRLLLVMGLLIILCLLF 238
>gi|357145788|ref|XP_003573766.1| PREDICTED: uncharacterized protein LOC100825734 [Brachypodium
distachyon]
Length = 462
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKP 74
+ CPVCK ++ +++P+YGRGG +++ P
Sbjct: 209 HRECPVCKGQVADDAIIPIYGRGGSAASVHDAPP 242
>gi|225428562|ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Vitis vinifera]
gi|147795942|emb|CAN60863.1| hypothetical protein VITISV_016726 [Vitis vinifera]
Length = 229
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
CPVCKA + LVPLYGRG + SD + ++ G +P+RP
Sbjct: 64 HSHECPVCKALVQEEKLVPLYGRG--KTPSDPRSRSVPGINIPNRP 107
>gi|348532807|ref|XP_003453897.1| PREDICTED: RING finger protein 185-like [Oreochromis niloticus]
Length = 188
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+Q CPVCKA IS ++P+YGRG +K P RP
Sbjct: 69 RQVCPVCKAGISRDKVIPIYGRGSTGQQDPREK------TPPRPQ 107
>gi|302851601|ref|XP_002957324.1| hypothetical protein VOLCADRAFT_34979 [Volvox carteri f.
nagariensis]
gi|300257419|gb|EFJ41668.1| hypothetical protein VOLCADRAFT_34979 [Volvox carteri f.
nagariensis]
Length = 96
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 42 QNCPVCKANISVASLVPLYGRGG--ISSASDSKKPNLGEVVPSRP 84
+ CPVCKA + + +VP+YGRG S ++ KP VP RP
Sbjct: 50 RACPVCKAGVEIDKVVPIYGRGSEPASKVQEAVKP-----VPPRP 89
>gi|156089389|ref|XP_001612101.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799355|gb|EDO08533.1| hypothetical protein BBOV_III009770 [Babesia bovis]
Length = 159
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 38 DEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 88
++ +CPVC A I+ +++PLYGRG ++ +K PS P PSA
Sbjct: 59 NKPNDHCPVCHAGITKENVIPLYGRGQETNDPRNK--------PSEPRPSA 101
>gi|83265414|gb|ABB97507.1| BSK65-MONO2 [Homo sapiens]
Length = 110
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS ++PLYGRG
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRG 95
>gi|209154244|gb|ACI33354.1| RING finger protein 185 [Salmo salar]
Length = 181
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 41 QQNCPVCKANISVASLVPLYGRG 63
+Q CPVCKA IS ++PLYGRG
Sbjct: 70 RQVCPVCKAGISRDKVIPLYGRG 92
>gi|357151044|ref|XP_003575664.1| PREDICTED: uncharacterized protein LOC100839731 [Brachypodium
distachyon]
Length = 233
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNL-GEVVPSRP 84
CPVCKA + LVPLYGRG D + N+ G +P RP
Sbjct: 61 CPVCKAVVEEDKLVPLYGRG--KDRVDPRSKNVPGAEIPHRP 100
>gi|242084372|ref|XP_002442611.1| hypothetical protein SORBIDRAFT_08g022940 [Sorghum bicolor]
gi|241943304|gb|EES16449.1| hypothetical protein SORBIDRAFT_08g022940 [Sorghum bicolor]
Length = 232
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK +P+RP
Sbjct: 61 CPVCKAIVEEDKLVPLYGRGKDRVDPRSKNVPGAADIPNRP 101
>gi|226501738|ref|NP_001142324.1| uncharacterized protein LOC100274494 [Zea mays]
gi|194708212|gb|ACF88190.1| unknown [Zea mays]
gi|414877052|tpg|DAA54183.1| TPA: putative RING/U-box superfamily protein isoform 1 [Zea mays]
gi|414877053|tpg|DAA54184.1| TPA: putative RING/U-box superfamily protein isoform 2 [Zea mays]
gi|414877250|tpg|DAA54381.1| TPA: putative RING/U-box superfamily protein isoform 1 [Zea mays]
gi|414877251|tpg|DAA54382.1| TPA: putative RING/U-box superfamily protein isoform 2 [Zea mays]
Length = 475
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
CPVCK + ++ P+YGRGG DS P+L P RP
Sbjct: 290 CPVCKGEVLEVNVTPIYGRGG--EEGDSTNPDL----PPRPR 325
>gi|410925200|ref|XP_003976069.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Takifugu
rubripes]
Length = 210
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 41 QQNCPVCKANISVASLVPLYGRGGIS 66
+Q CPVC A IS ++PLYGRG S
Sbjct: 91 RQQCPVCNAGISREKVIPLYGRGSAS 116
>gi|242057205|ref|XP_002457748.1| hypothetical protein SORBIDRAFT_03g012810 [Sorghum bicolor]
gi|241929723|gb|EES02868.1| hypothetical protein SORBIDRAFT_03g012810 [Sorghum bicolor]
Length = 474
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
CPVCK + ++ P+YGRGG DS P+L P RP
Sbjct: 291 CPVCKGEVLEVNVTPIYGRGG--EEGDSTNPDL----PPRPQ 326
>gi|30689709|ref|NP_181969.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|44681388|gb|AAS47634.1| At2g44410 [Arabidopsis thaliana]
gi|45773900|gb|AAS76754.1| At2g44410 [Arabidopsis thaliana]
gi|330255323|gb|AEC10417.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 413
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+ CPVC ++ A ++P+YG G + K + G +P RP+
Sbjct: 160 KECPVCDGEVTDAEVIPIYGNGDDCDGTKPKLEDCGISLPPRPN 203
>gi|196229622|ref|ZP_03128486.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
gi|196225948|gb|EDY20454.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
Length = 781
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 15/109 (13%)
Query: 8 PETGYATEEDASLKQKWSPTSAPTNVPEKDDEQQQNCPVCKANISVAS------LVPLYG 61
P T D L Q S AP +V + CPVC A +V+S LV + G
Sbjct: 31 PPVANNTNVDELLIQNCSDCGAPVDVTNVEPLSAVVCPVCGAPATVSSMIDHFQLVDMLG 90
Query: 62 RGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSD 110
GG+ + + +LG +V + + S+ T Q QQL ++
Sbjct: 91 HGGMGAVYKAYDTSLGRMVALK---------LLRKSSGTAEQIQQLETE 130
>gi|209880810|ref|XP_002141844.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557450|gb|EEA07495.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 216
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 42 QNCPVCKANISVASLVPLYGRG-GISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTST 100
++CPVCKA ++ +++PLYGRG G KP P P A T ++S
Sbjct: 81 EDCPVCKAGVTQENVIPLYGRGCGNDDPRKKTKPR-----PRAERPEARQRHSTGHNSSF 135
Query: 101 RH 102
R
Sbjct: 136 RE 137
>gi|357115618|ref|XP_003559585.1| PREDICTED: uncharacterized protein LOC100830874 [Brachypodium
distachyon]
Length = 307
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRHQ 103
CPVCKA + LVPLYGRG SK G +P RP + Q
Sbjct: 138 CPVCKAIVEEDKLVPLYGRGKDRVDPRSKN-TPGADIPHRP----------AGQRPATAQ 186
Query: 104 TQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALASSSLGGMATISFFNPLMGML 156
+++F + H Q+F G+ LA++ G A + F L ML
Sbjct: 187 QADPNNNFMNA-----HANQWF-MGMGTGVPLANARWGNYAFSAAFGGLFPML 233
>gi|356528597|ref|XP_003532886.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-like [Glycine max]
Length = 196
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGE---VVPSRPHPSALNT 91
+ CPVCK ++ +VP+YG S +S K +L E VP+RP P + +
Sbjct: 140 RECPVCKGDVPEEGIVPIYGN---VSVDNSGKFDLNETDSTVPARPRPHRIES 189
>gi|325179526|emb|CCA13923.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 917
Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 13 ATEEDASLKQKWSPTSAPTNVPEKDDEQQQNCPVCKANISVASLVPLYGRGGISSASDSK 72
ATE+DA ++ + SP S P PE+ + N P+ K + S +L L G ++S +
Sbjct: 55 ATEKDALVEPQLSPASHPVEKPEETNTNGTNQPIEKESESAKNLAELIGVADVTSIPSQQ 114
Query: 73 KPNLGEVVPSRPHP 86
K E S P P
Sbjct: 115 KAE-NEDTESDPEP 127
>gi|3128183|gb|AAC16087.1| unknown protein [Arabidopsis thaliana]
Length = 404
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 85
+ CPVC ++ A ++P+YG G + K + G +P RP+
Sbjct: 151 KECPVCDGEVTDAEVIPIYGNGDDCDGTKPKLEDCGISLPPRPN 194
>gi|256075507|ref|XP_002574060.1| rnf5 [Schistosoma mansoni]
gi|360043086|emb|CCD78498.1| putative rnf5 [Schistosoma mansoni]
Length = 214
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRG 63
E + CPVCKA IS ++PLYGRG
Sbjct: 74 ETRTVCPVCKAAISSDKVIPLYGRG 98
>gi|326500092|dbj|BAJ90881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 44 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
CPVCKA + LVPLYGRG SK G +P RP
Sbjct: 63 CPVCKAIVEEDKLVPLYGRGKDRVDPRSKN-TPGADIPQRP 102
>gi|224138094|ref|XP_002322728.1| predicted protein [Populus trichocarpa]
gi|222867358|gb|EEF04489.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTR 101
+ CPVCK +++ ++ P+YGR G ++ + NL +P RPH + + T++R
Sbjct: 174 KECPVCKGEVTMKNVTPIYGR-GCTTREPVEDTNLE--IPIRPHARRVE---SLRQTASR 227
Query: 102 H 102
H
Sbjct: 228 H 228
>gi|403254659|ref|XP_003920078.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254661|ref|XP_003920079.1| PREDICTED: E3 ubiquitin-protein ligase RNF5-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 176
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 40 QQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 88
++Q CPVCKA IS +V LYGRG D + L RP P +
Sbjct: 56 ERQECPVCKAEISGEKVVLLYGRGS-RKPQDPRFKTLARPQGQRPAPES 103
>gi|212723182|ref|NP_001132733.1| uncharacterized protein LOC100194220 [Zea mays]
gi|194695252|gb|ACF81710.1| unknown [Zea mays]
gi|413917309|gb|AFW57241.1| putative RING/U-box superfamily protein [Zea mays]
Length = 473
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 43 NCPVCKANISVASLVPLYGRGG 64
+CPVCK + + S+ P+YGRGG
Sbjct: 304 DCPVCKGEVLLTSITPIYGRGG 325
>gi|195128775|ref|XP_002008837.1| GI13710 [Drosophila mojavensis]
gi|193920446|gb|EDW19313.1| GI13710 [Drosophila mojavensis]
Length = 151
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 39 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 86
+ ++ CPVC+A + + ++PLYGR +S ++ +V+ RP P
Sbjct: 51 DLRRCCPVCRAKLDITKIIPLYGR-------NSAVQDVNDVMAPRPPP 91
>gi|356531597|ref|XP_003534363.1| PREDICTED: uncharacterized protein LOC100794016 [Glycine max]
Length = 403
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK ++ ++P+YG + +S G +P RP
Sbjct: 158 RECPVCKGEVTETGIIPIYGNSSADGSRESGLKGAGMRIPPRP 200
>gi|255644551|gb|ACU22778.1| unknown [Glycine max]
Length = 403
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 42 QNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 84
+ CPVCK ++ ++P+YG + +S G +P RP
Sbjct: 158 RECPVCKGEVTETGIIPIYGNSSADGSRESGLKGAGMRIPPRP 200
>gi|290970080|ref|XP_002668028.1| predicted protein [Naegleria gruberi]
gi|284081072|gb|EFC35284.1| predicted protein [Naegleria gruberi]
Length = 213
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 44 CPVCKANISVASLVPLYGRG 63
CPVCKA I L+P+YGRG
Sbjct: 178 CPVCKAGIQQDKLIPIYGRG 197
>gi|353233037|emb|CCD80392.1| putative cation-transporting ATPase [Schistosoma mansoni]
Length = 1024
Score = 36.6 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 167 GSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLL 216
GS L Y S++ V N+ R+R + ++D+ +N ++ LFC LVL L+
Sbjct: 283 GSAIGLVIYTGSETRAVMNSSRVRTKRGKIDQEINNITKLLFCILVLLALI 333
>gi|256088057|ref|XP_002580176.1| cation-transporting ATPase [Schistosoma mansoni]
Length = 1024
Score = 36.6 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 167 GSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRVSLFLFCCLVLCLLL 216
GS L Y S++ V N+ R+R + ++D+ +N ++ LFC LVL L+
Sbjct: 283 GSAIGLVIYTGSETRAVMNSSRVRTKRGKIDQEINNITKLLFCILVLLALI 333
>gi|357139763|ref|XP_003571447.1| PREDICTED: uncharacterized protein LOC100845092 [Brachypodium
distachyon]
Length = 468
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 14/63 (22%)
Query: 43 NCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRH 102
CPVCK + +++P+YGR G + + VP RPH + + S RH
Sbjct: 269 KCPVCKEKVLELNIIPIYGRSGDERDASNND------VPPRPH--------ANRTESLRH 314
Query: 103 QTQ 105
Q Q
Sbjct: 315 QLQ 317
>gi|431899008|gb|ELK07378.1| 72 kDa inositol polyphosphate 5-phosphatase [Pteropus alecto]
Length = 620
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 66 SSASDSKKPNLGEVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDF 111
S AS P L +V+PSRP P A++ + TS S T H+ H+D+
Sbjct: 151 SGASAGGTPKLADVLPSRPLP-AIDWNTTSDSLRTTHRVDADHADY 195
>gi|348680562|gb|EGZ20378.1| hypothetical protein PHYSODRAFT_488893 [Phytophthora sojae]
Length = 131
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Query: 44 CPVCKANISVASLVPLYGRG-------GISSASDSKKPNLGEVVPSRPH 85
CPVCKA IS +++P+Y RG GI ++P+ ++ RP+
Sbjct: 7 CPVCKAGISEENVIPVYARGAEAVDPRGIPHRPRGQRPDAEQLRQRRPY 55
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.129 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,405,238,598
Number of Sequences: 23463169
Number of extensions: 134193336
Number of successful extensions: 462009
Number of sequences better than 100.0: 494
Number of HSP's better than 100.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 461508
Number of HSP's gapped (non-prelim): 563
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)