Query 027910
Match_columns 217
No_of_seqs 137 out of 1454
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:37:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gl5_A Putative DSBA oxidoredu 100.0 1.1E-44 3.7E-49 291.5 23.0 202 13-216 2-212 (239)
2 3fz5_A Possible 2-hydroxychrom 100.0 8.1E-43 2.8E-47 274.0 13.9 194 12-214 3-199 (202)
3 3rpp_A Glutathione S-transfera 100.0 3E-40 1E-44 264.9 14.8 197 12-216 4-214 (234)
4 2imf_A HCCA isomerase, 2-hydro 100.0 8.7E-41 3E-45 262.4 8.1 193 14-216 1-195 (203)
5 3kzq_A Putative uncharacterize 100.0 2.7E-38 9.1E-43 249.1 20.2 189 14-216 3-202 (208)
6 1r4w_A Glutathione S-transfera 100.0 4.7E-39 1.6E-43 256.6 13.1 196 12-216 4-214 (226)
7 2in3_A Hypothetical protein; D 100.0 2.8E-36 9.6E-41 238.4 20.3 194 11-216 5-209 (216)
8 3bci_A Disulfide bond protein 100.0 4E-32 1.4E-36 210.0 15.8 167 4-216 3-177 (186)
9 3gha_A Disulfide bond formatio 100.0 4.4E-31 1.5E-35 207.1 16.4 168 3-216 20-191 (202)
10 2rem_A Disulfide oxidoreductas 100.0 8.9E-30 3E-34 197.6 17.7 159 7-216 19-183 (193)
11 3h93_A Thiol:disulfide interch 100.0 7.6E-30 2.6E-34 198.1 14.5 158 9-216 22-183 (192)
12 2znm_A Thiol:disulfide interch 100.0 6.6E-29 2.3E-33 193.0 16.7 161 6-216 16-179 (195)
13 3gn3_A Putative protein-disulf 100.0 5.4E-29 1.9E-33 192.0 14.6 156 11-212 13-181 (182)
14 3hz8_A Thiol:disulfide interch 100.0 2.2E-28 7.6E-33 190.3 16.9 156 10-216 22-182 (193)
15 4dvc_A Thiol:disulfide interch 100.0 2.6E-28 8.9E-33 187.4 16.9 163 6-216 15-181 (184)
16 3l9s_A Thiol:disulfide interch 100.0 6.7E-28 2.3E-32 187.4 14.7 156 10-215 19-187 (191)
17 3feu_A Putative lipoprotein; a 100.0 1.7E-28 5.7E-33 189.9 10.6 154 12-216 22-183 (185)
18 3gyk_A 27KDA outer membrane pr 100.0 1.7E-27 5.9E-32 182.0 16.0 158 3-216 13-172 (175)
19 3f4s_A Alpha-DSBA1, putative u 100.0 1.4E-28 4.9E-33 195.8 9.5 164 4-216 31-210 (226)
20 3gmf_A Protein-disulfide isome 99.9 3.5E-28 1.2E-32 190.9 9.3 164 4-217 7-197 (205)
21 3hd5_A Thiol:disulfide interch 99.9 3.8E-27 1.3E-31 183.2 15.1 156 10-216 23-183 (195)
22 3c7m_A Thiol:disulfide interch 99.9 1.6E-27 5.5E-32 184.9 12.2 169 11-216 16-193 (195)
23 3l9v_A Putative thiol-disulfid 99.9 6E-27 2.1E-31 181.7 15.1 155 12-216 14-182 (189)
24 1z6m_A Conserved hypothetical 99.9 5E-24 1.7E-28 162.8 11.9 155 4-213 19-174 (175)
25 3gv1_A Disulfide interchange p 99.7 1.7E-17 5.9E-22 123.2 9.3 129 7-216 9-138 (147)
26 1v58_A Thiol:disulfide interch 99.7 1.8E-16 6.2E-21 127.0 9.1 138 6-216 91-232 (241)
27 1t3b_A Thiol:disulfide interch 99.5 1.8E-13 6E-18 107.4 13.5 128 8-216 82-210 (211)
28 1eej_A Thiol:disulfide interch 99.4 1.8E-12 6E-17 102.0 11.6 129 7-216 81-210 (216)
29 1un2_A DSBA, thiol-disulfide i 99.1 1.5E-10 5.2E-15 89.7 7.5 61 140-200 1-63 (197)
30 3tdg_A DSBG, putative uncharac 99.0 6.9E-10 2.4E-14 89.5 8.7 41 10-56 145-185 (273)
31 1un2_A DSBA, thiol-disulfide i 98.7 1.5E-08 5.1E-13 78.4 6.1 81 11-139 112-195 (197)
32 1fo5_A Thioredoxin; disulfide 98.4 5.1E-07 1.7E-11 59.2 6.1 35 181-215 50-84 (85)
33 1nho_A Probable thioredoxin; b 98.3 8.4E-07 2.9E-11 58.1 5.6 37 180-216 48-84 (85)
34 2b5x_A YKUV protein, TRXY; thi 98.1 2.5E-05 8.5E-10 56.1 10.5 40 11-52 28-67 (148)
35 3ha9_A Uncharacterized thiored 98.0 0.00014 4.7E-09 53.5 13.0 129 5-216 30-163 (165)
36 3eyt_A Uncharacterized protein 98.0 0.00031 1.1E-08 51.1 14.1 46 5-51 21-67 (158)
37 2f9s_A Thiol-disulfide oxidore 98.0 0.00026 8.8E-09 51.2 13.2 42 9-51 23-64 (151)
38 1zzo_A RV1677; thioredoxin fol 98.0 0.00032 1.1E-08 49.2 13.2 37 11-50 24-60 (136)
39 2l5o_A Putative thioredoxin; s 97.9 0.00015 5.1E-09 52.5 11.5 40 11-51 27-66 (153)
40 3lor_A Thiol-disulfide isomera 97.9 0.00037 1.3E-08 50.7 13.7 43 9-52 27-70 (160)
41 3erw_A Sporulation thiol-disul 97.9 0.00052 1.8E-08 48.8 13.5 40 11-51 33-72 (145)
42 3or5_A Thiol:disulfide interch 97.9 0.00035 1.2E-08 51.0 12.6 39 11-50 33-71 (165)
43 3raz_A Thioredoxin-related pro 97.8 0.00093 3.2E-08 48.2 14.3 45 6-51 18-62 (151)
44 2l57_A Uncharacterized protein 97.8 0.00034 1.2E-08 49.0 11.5 39 178-216 73-116 (126)
45 4evm_A Thioredoxin family prot 97.8 0.00057 2E-08 47.8 12.7 42 7-50 17-58 (138)
46 2lja_A Putative thiol-disulfid 97.8 0.00024 8.3E-09 51.2 10.8 40 10-50 28-67 (152)
47 1dby_A Chloroplast thioredoxin 97.8 0.00027 9.3E-09 47.8 10.4 39 179-217 65-107 (107)
48 1lu4_A Soluble secreted antige 97.8 0.00074 2.5E-08 47.4 12.7 37 11-50 23-59 (136)
49 3fkf_A Thiol-disulfide oxidore 97.8 0.00079 2.7E-08 48.0 12.6 41 11-51 32-72 (148)
50 2trx_A Thioredoxin; electron t 97.7 0.00074 2.5E-08 45.7 11.6 37 180-216 67-107 (108)
51 2h30_A Thioredoxin, peptide me 97.7 0.00037 1.3E-08 50.9 10.5 45 9-54 35-79 (164)
52 1kng_A Thiol:disulfide interch 97.7 0.00072 2.5E-08 48.8 11.6 35 5-39 35-69 (156)
53 2ywm_A Glutaredoxin-like prote 97.7 0.00059 2E-08 53.0 11.7 39 177-215 179-218 (229)
54 1t00_A Thioredoxin, TRX; redox 97.7 0.00054 1.8E-08 46.8 10.1 38 179-216 69-110 (112)
55 2lrn_A Thiol:disulfide interch 97.6 0.0019 6.5E-08 46.6 13.0 40 11-51 28-67 (152)
56 3gl3_A Putative thiol:disulfid 97.6 0.0011 3.8E-08 47.6 11.4 42 9-51 25-66 (152)
57 3tco_A Thioredoxin (TRXA-1); d 97.6 0.00088 3E-08 45.2 10.0 32 12-43 21-52 (109)
58 2i4a_A Thioredoxin; acidophIle 97.6 0.0016 5.5E-08 43.7 11.1 33 11-43 19-51 (107)
59 1ep7_A Thioredoxin CH1, H-type 97.5 0.00095 3.3E-08 45.4 9.9 31 12-42 24-54 (112)
60 2cvb_A Probable thiol-disulfid 97.5 0.00067 2.3E-08 50.9 9.8 34 10-43 31-64 (188)
61 1thx_A Thioredoxin, thioredoxi 97.5 0.0016 5.4E-08 44.4 11.0 38 179-216 71-112 (115)
62 3die_A Thioredoxin, TRX; elect 97.5 0.0009 3.1E-08 44.9 9.6 33 11-43 18-50 (106)
63 1w4v_A Thioredoxin, mitochondr 97.5 0.0015 5.2E-08 45.2 10.8 38 179-216 77-118 (119)
64 2o8v_B Thioredoxin 1; disulfid 97.5 0.0013 4.4E-08 46.5 10.3 33 11-43 39-71 (128)
65 1fb6_A Thioredoxin M; electron 97.5 0.0016 5.3E-08 43.6 10.3 37 179-215 64-104 (105)
66 1syr_A Thioredoxin; SGPP, stru 97.5 0.0011 3.7E-08 45.4 9.6 31 12-42 26-56 (112)
67 1nsw_A Thioredoxin, TRX; therm 97.5 0.00096 3.3E-08 44.8 9.1 37 180-216 64-104 (105)
68 2e0q_A Thioredoxin; electron t 97.5 0.0017 5.9E-08 43.1 10.3 38 179-216 61-102 (104)
69 1ilo_A Conserved hypothetical 97.4 0.00022 7.6E-09 45.3 5.1 57 146-212 19-76 (77)
70 3gnj_A Thioredoxin domain prot 97.4 0.0019 6.3E-08 43.8 10.1 39 178-216 67-109 (111)
71 2ggt_A SCO1 protein homolog, m 97.4 0.004 1.4E-07 45.3 12.5 41 11-51 22-66 (164)
72 1xfl_A Thioredoxin H1; AT3G510 97.4 0.0022 7.6E-08 44.9 10.3 32 11-42 37-68 (124)
73 3ia1_A THIO-disulfide isomeras 97.4 0.0016 5.5E-08 46.9 9.8 29 13-41 31-59 (154)
74 3kcm_A Thioredoxin family prot 97.4 0.0012 3.9E-08 47.7 9.0 39 11-50 27-65 (154)
75 2yzu_A Thioredoxin; redox prot 97.3 0.0021 7.3E-08 43.1 9.6 37 179-215 64-104 (109)
76 2vlu_A Thioredoxin, thioredoxi 97.3 0.0024 8.3E-08 44.1 10.1 37 179-216 79-119 (122)
77 1faa_A Thioredoxin F; electron 97.3 0.0015 5.1E-08 45.4 9.0 38 179-217 83-124 (124)
78 2b1k_A Thiol:disulfide interch 97.3 0.002 6.7E-08 47.3 10.0 29 11-39 50-78 (168)
79 3ewl_A Uncharacterized conserv 97.3 0.00094 3.2E-08 47.5 7.9 44 6-50 21-67 (142)
80 3hxs_A Thioredoxin, TRXP; elec 97.3 0.0041 1.4E-07 44.2 11.2 33 11-43 50-82 (141)
81 2vup_A Glutathione peroxidase- 97.3 0.016 5.4E-07 43.6 15.1 41 11-52 47-87 (190)
82 1a8l_A Protein disulfide oxido 97.3 0.0021 7.2E-08 49.6 10.3 40 177-216 182-225 (226)
83 3ul3_B Thioredoxin, thioredoxi 97.3 0.0027 9.4E-08 44.5 9.9 33 10-42 40-72 (128)
84 2pu9_C TRX-F, thioredoxin F-ty 97.3 0.0022 7.5E-08 43.6 9.0 31 12-42 24-54 (111)
85 2l6c_A Thioredoxin; oxidoreduc 97.3 0.0022 7.6E-08 43.8 9.0 37 179-215 64-104 (110)
86 3hcz_A Possible thiol-disulfid 97.2 0.0012 4.1E-08 47.1 7.7 45 6-51 25-69 (148)
87 3hz4_A Thioredoxin; NYSGXRC, P 97.2 0.0033 1.1E-07 44.9 10.0 32 12-43 24-55 (140)
88 4fo5_A Thioredoxin-like protei 97.2 0.0042 1.4E-07 44.2 10.3 46 5-51 25-70 (143)
89 3fw2_A Thiol-disulfide oxidore 97.2 0.016 5.6E-07 41.4 13.5 41 11-51 32-74 (150)
90 2voc_A Thioredoxin; electron t 97.2 0.0062 2.1E-07 41.5 10.5 36 180-215 64-103 (112)
91 2ppt_A Thioredoxin-2; thiredox 97.1 0.0084 2.9E-07 43.7 11.5 38 179-216 110-151 (155)
92 4euy_A Uncharacterized protein 97.1 0.0048 1.6E-07 41.5 9.5 32 11-42 17-48 (105)
93 3kh7_A Thiol:disulfide interch 97.1 0.0055 1.9E-07 45.6 10.5 34 6-39 52-85 (176)
94 3uvt_A Thioredoxin domain-cont 97.1 0.0074 2.5E-07 40.6 10.3 37 179-215 70-110 (111)
95 2vm1_A Thioredoxin, thioredoxi 97.1 0.0066 2.2E-07 41.4 10.1 31 12-42 28-58 (118)
96 3cmi_A Peroxiredoxin HYR1; thi 97.0 0.014 4.6E-07 43.0 11.9 45 6-52 26-70 (171)
97 1v98_A Thioredoxin; oxidoreduc 97.0 0.011 3.7E-07 42.0 11.0 38 179-216 96-137 (140)
98 3lwa_A Secreted thiol-disulfid 97.0 0.014 4.9E-07 43.3 12.0 36 8-43 55-90 (183)
99 2hyx_A Protein DIPZ; thioredox 97.0 0.012 4.2E-07 49.1 12.6 44 6-50 76-119 (352)
100 2l5l_A Thioredoxin; structural 97.0 0.011 3.7E-07 41.9 10.7 33 11-43 37-69 (136)
101 2rli_A SCO2 protein homolog, m 97.0 0.023 8E-07 41.4 12.8 44 9-52 23-70 (171)
102 3emx_A Thioredoxin; structural 97.0 0.0027 9.1E-08 45.1 7.2 47 170-216 75-125 (135)
103 3qfa_C Thioredoxin; protein-pr 96.9 0.0073 2.5E-07 41.6 9.0 36 179-215 76-115 (116)
104 2ywi_A Hypothetical conserved 96.9 0.003 1E-07 47.5 7.5 36 14-50 48-83 (196)
105 1r26_A Thioredoxin; redox-acti 96.9 0.012 4E-07 41.3 10.0 32 11-42 36-67 (125)
106 3p2a_A Thioredoxin 2, putative 96.8 0.017 5.7E-07 41.4 10.7 33 11-43 54-86 (148)
107 3d6i_A Monothiol glutaredoxin- 96.8 0.014 4.9E-07 39.4 9.9 32 10-41 19-50 (112)
108 2p5q_A Glutathione peroxidase 96.8 0.034 1.2E-06 40.4 12.2 40 11-51 31-70 (170)
109 2wz9_A Glutaredoxin-3; protein 96.7 0.021 7E-07 41.3 10.3 30 12-41 32-61 (153)
110 3u5r_E Uncharacterized protein 96.7 0.032 1.1E-06 42.9 11.9 38 13-51 60-97 (218)
111 2qgv_A Hydrogenase-1 operon pr 96.7 0.0032 1.1E-07 45.5 5.6 66 145-216 55-124 (140)
112 3eur_A Uncharacterized protein 96.6 0.0089 3E-07 42.4 7.9 42 9-51 28-72 (142)
113 3kp8_A Vkorc1/thioredoxin doma 96.5 0.0032 1.1E-07 43.1 4.8 34 179-213 58-91 (106)
114 3ic4_A Glutaredoxin (GRX-1); s 96.4 0.013 4.5E-07 38.4 7.2 62 148-213 28-91 (92)
115 3qou_A Protein YBBN; thioredox 96.4 0.037 1.3E-06 44.1 10.8 33 11-43 25-57 (287)
116 1xzo_A BSSCO, hypothetical pro 96.3 0.063 2.2E-06 39.1 10.8 41 11-51 32-74 (174)
117 3ktb_A Arsenical resistance op 96.2 0.024 8.3E-07 38.7 7.5 62 151-212 38-101 (106)
118 3dml_A Putative uncharacterize 96.2 0.0055 1.9E-07 42.8 4.2 37 180-216 69-109 (116)
119 2qsi_A Putative hydrogenase ex 96.2 0.0066 2.3E-07 43.7 4.7 64 145-215 54-121 (137)
120 1jfu_A Thiol:disulfide interch 96.1 0.07 2.4E-06 39.5 10.6 41 11-52 59-99 (186)
121 2v1m_A Glutathione peroxidase; 96.1 0.17 5.9E-06 36.4 12.5 41 11-52 30-70 (169)
122 2es7_A Q8ZP25_salty, putative 96.1 0.013 4.6E-07 42.2 6.1 42 175-216 79-124 (142)
123 1r7h_A NRDH-redoxin; thioredox 96.0 0.014 4.9E-07 36.4 5.5 58 148-213 17-74 (75)
124 3drn_A Peroxiredoxin, bacterio 96.0 0.057 1.9E-06 39.1 9.6 35 15-50 32-67 (161)
125 3q6o_A Sulfhydryl oxidase 1; p 95.9 0.03 1E-06 43.7 8.1 40 12-51 30-70 (244)
126 2p31_A CL683, glutathione pero 95.9 0.08 2.8E-06 39.2 10.2 40 11-51 48-87 (181)
127 3kgk_A Arsenical resistance op 95.9 0.027 9.3E-07 38.7 6.5 63 150-212 34-98 (110)
128 3zzx_A Thioredoxin; oxidoreduc 95.9 0.0092 3.2E-07 40.6 4.3 37 178-215 64-104 (105)
129 3kij_A Probable glutathione pe 95.9 0.3 1E-05 36.0 13.1 45 6-51 32-76 (180)
130 3dwv_A Glutathione peroxidase- 95.9 0.077 2.6E-06 39.6 9.8 49 5-54 39-87 (187)
131 2hls_A Protein disulfide oxido 95.8 0.014 4.7E-07 46.0 5.7 39 178-216 187-225 (243)
132 3apq_A DNAJ homolog subfamily 95.8 0.087 3E-06 40.1 10.0 37 179-215 160-200 (210)
133 1zma_A Bacterocin transport ac 95.6 0.037 1.3E-06 37.8 6.5 40 174-213 74-117 (118)
134 1h75_A Glutaredoxin-like prote 95.5 0.0075 2.6E-07 38.5 2.6 30 182-213 45-74 (81)
135 2fgx_A Putative thioredoxin; N 95.5 0.012 4.2E-07 40.4 3.8 57 146-212 48-106 (107)
136 2gs3_A PHGPX, GPX-4, phospholi 95.4 0.19 6.4E-06 37.3 10.6 40 11-51 48-87 (185)
137 4hde_A SCO1/SENC family lipopr 95.3 0.22 7.7E-06 36.5 10.6 49 9-58 29-78 (170)
138 2obi_A PHGPX, GPX-4, phospholi 95.3 0.15 5.3E-06 37.6 9.6 40 11-51 46-85 (183)
139 2b7k_A SCO1 protein; metalloch 95.1 0.14 4.9E-06 38.6 8.9 42 11-52 40-84 (200)
140 2bmx_A Alkyl hydroperoxidase C 95.0 0.29 9.9E-06 36.6 10.6 40 11-51 44-84 (195)
141 3f3q_A Thioredoxin-1; His TAG, 95.0 0.041 1.4E-06 37.2 5.2 31 12-42 24-54 (109)
142 2fwh_A Thiol:disulfide interch 95.0 0.037 1.3E-06 38.9 5.1 41 176-216 80-127 (134)
143 2kok_A Arsenate reductase; bru 95.0 0.27 9.2E-06 34.1 9.5 34 14-55 5-38 (120)
144 2kuc_A Putative disulphide-iso 94.9 0.057 2E-06 37.4 5.9 40 177-216 76-120 (130)
145 2j23_A Thioredoxin; immune pro 94.9 0.037 1.3E-06 38.1 4.8 38 179-217 80-121 (121)
146 2av4_A Thioredoxin-like protei 94.8 0.073 2.5E-06 39.2 6.4 62 146-215 61-137 (160)
147 2lqo_A Putative glutaredoxin R 94.8 0.1 3.5E-06 34.6 6.6 64 146-216 18-83 (92)
148 2f8a_A Glutathione peroxidase 94.8 0.93 3.2E-05 34.4 13.0 44 8-52 43-86 (208)
149 2ju5_A Thioredoxin disulfide i 94.6 0.084 2.9E-06 38.1 6.4 41 175-216 104-151 (154)
150 3nzn_A Glutaredoxin; structura 94.6 0.11 3.8E-06 34.8 6.6 29 182-212 72-101 (103)
151 3m9j_A Thioredoxin; oxidoreduc 94.6 0.069 2.4E-06 35.2 5.4 36 179-215 65-104 (105)
152 3me7_A Putative uncharacterize 94.6 0.73 2.5E-05 33.6 11.5 46 6-51 22-69 (170)
153 1wjk_A C330018D20RIK protein; 94.6 0.038 1.3E-06 37.1 4.0 35 180-215 60-94 (100)
154 1oaz_A Thioredoxin 1; immune s 94.5 0.027 9.1E-07 39.2 3.3 38 179-216 81-122 (123)
155 1ego_A Glutaredoxin; electron 94.5 0.055 1.9E-06 34.5 4.6 36 14-52 1-36 (85)
156 2vim_A Thioredoxin, TRX; thior 94.5 0.069 2.3E-06 35.1 5.2 36 179-215 64-103 (104)
157 1xwb_A Thioredoxin; dimerizati 94.5 0.065 2.2E-06 35.4 5.0 32 11-42 19-50 (106)
158 2dj1_A Protein disulfide-isome 94.5 0.074 2.5E-06 37.3 5.6 39 178-216 82-123 (140)
159 2oe3_A Thioredoxin-3; electron 94.4 0.05 1.7E-06 37.1 4.4 35 179-214 75-113 (114)
160 1mek_A Protein disulfide isome 94.3 0.032 1.1E-06 37.8 3.3 37 180-216 74-116 (120)
161 2xc2_A Thioredoxinn; oxidoredu 94.2 0.083 2.8E-06 35.9 5.3 36 179-215 77-116 (117)
162 3kp9_A Vkorc1/thioredoxin doma 94.2 0.044 1.5E-06 44.5 4.2 36 177-213 241-276 (291)
163 1ttz_A Conserved hypothetical 94.2 0.021 7.1E-07 37.6 1.9 35 179-215 40-75 (87)
164 2i1u_A Thioredoxin, TRX, MPT46 94.1 0.032 1.1E-06 38.0 3.0 37 179-215 76-116 (121)
165 3d22_A TRXH4, thioredoxin H-ty 94.0 0.11 3.8E-06 36.4 5.7 38 178-216 90-131 (139)
166 3cxg_A Putative thioredoxin; m 93.9 0.097 3.3E-06 36.8 5.3 37 179-216 84-128 (133)
167 2k8s_A Thioredoxin; dimer, str 93.9 0.064 2.2E-06 34.1 3.8 36 15-54 3-38 (80)
168 1z3e_A Regulatory protein SPX; 93.8 0.38 1.3E-05 33.9 8.3 32 16-55 3-34 (132)
169 1o73_A Tryparedoxin; electron 93.6 0.2 6.7E-06 35.1 6.5 42 11-52 27-68 (144)
170 2yan_A Glutaredoxin-3; oxidore 93.6 0.077 2.6E-06 35.8 4.1 56 147-208 37-92 (105)
171 1fov_A Glutaredoxin 3, GRX3; a 93.6 0.094 3.2E-06 33.1 4.3 51 147-203 16-66 (82)
172 1x5e_A Thioredoxin domain cont 93.6 0.058 2E-06 37.2 3.5 37 179-215 69-108 (126)
173 1ego_A Glutaredoxin; electron 93.5 0.11 3.8E-06 33.0 4.7 32 179-214 48-81 (85)
174 3msz_A Glutaredoxin 1; alpha-b 93.5 0.091 3.1E-06 33.7 4.2 57 147-207 19-80 (89)
175 2fgx_A Putative thioredoxin; N 93.5 0.081 2.8E-06 36.2 4.0 32 10-41 26-57 (107)
176 3qmx_A Glutaredoxin A, glutare 93.5 0.068 2.3E-06 35.8 3.6 53 148-206 32-85 (99)
177 1ilo_A Conserved hypothetical 93.5 0.14 4.7E-06 31.8 4.9 28 14-42 2-29 (77)
178 3s9f_A Tryparedoxin; thioredox 93.5 0.18 6.1E-06 36.7 6.2 46 8-53 44-89 (165)
179 1i5g_A Tryparedoxin II; electr 93.4 0.15 5.2E-06 35.8 5.6 42 11-52 27-68 (144)
180 1xwb_A Thioredoxin; dimerizati 93.3 0.21 7.1E-06 32.8 5.9 36 179-215 66-105 (106)
181 1ti3_A Thioredoxin H, PTTRXH1; 93.3 0.045 1.6E-06 36.7 2.5 32 11-42 25-56 (113)
182 2wci_A Glutaredoxin-4; redox-a 93.2 0.11 3.8E-06 37.0 4.5 53 146-205 54-107 (135)
183 2i3y_A Epididymal secretory gl 93.1 2.2 7.6E-05 32.6 14.6 47 5-53 49-95 (215)
184 3gix_A Thioredoxin-like protei 93.1 0.17 5.7E-06 36.4 5.4 37 179-215 69-119 (149)
185 3ipz_A Monothiol glutaredoxin- 93.1 0.11 3.8E-06 35.4 4.2 53 146-205 37-90 (109)
186 1gh2_A Thioredoxin-like protei 93.0 0.14 4.7E-06 34.1 4.6 31 11-41 20-50 (107)
187 2r37_A Glutathione peroxidase 93.0 2.2 7.7E-05 32.3 14.3 46 5-52 31-76 (207)
188 1ti3_A Thioredoxin H, PTTRXH1; 93.0 0.25 8.6E-06 32.9 5.9 35 181-216 73-111 (113)
189 3msz_A Glutaredoxin 1; alpha-b 92.9 0.061 2.1E-06 34.6 2.6 23 13-35 3-25 (89)
190 2lqo_A Putative glutaredoxin R 92.8 0.069 2.4E-06 35.5 2.7 35 12-54 2-36 (92)
191 2dj3_A Protein disulfide-isome 92.8 0.21 7.1E-06 34.6 5.5 39 12-50 25-63 (133)
192 2yj7_A LPBCA thioredoxin; oxid 91.9 0.02 6.8E-07 37.9 0.0 37 179-215 65-105 (106)
193 3h79_A Thioredoxin-like protei 92.7 0.2 6.7E-06 34.6 5.2 38 178-215 83-126 (127)
194 3c1r_A Glutaredoxin-1; oxidize 92.7 0.1 3.4E-06 36.1 3.6 24 180-204 75-98 (118)
195 1x5d_A Protein disulfide-isome 92.6 0.17 5.9E-06 34.9 4.9 37 179-215 75-115 (133)
196 2axo_A Hypothetical protein AT 92.4 0.75 2.6E-05 36.7 8.8 41 174-215 99-141 (270)
197 1kte_A Thioltransferase; redox 92.4 0.32 1.1E-05 32.3 5.8 23 180-203 61-83 (105)
198 1o8x_A Tryparedoxin, TRYX, TXN 92.3 0.29 9.9E-06 34.4 5.8 42 11-52 27-68 (146)
199 3h8q_A Thioredoxin reductase 3 92.3 0.28 9.7E-06 33.5 5.5 60 146-208 31-90 (114)
200 2vim_A Thioredoxin, TRX; thior 92.3 0.29 9.8E-06 32.0 5.4 38 11-51 18-55 (104)
201 2i1u_A Thioredoxin, TRX, MPT46 92.3 0.24 8.3E-06 33.4 5.2 37 12-50 30-66 (121)
202 2dml_A Protein disulfide-isome 92.3 0.26 8.9E-06 33.9 5.4 32 12-43 35-66 (130)
203 2klx_A Glutaredoxin; thioredox 92.2 0.18 6.2E-06 32.5 4.2 51 147-205 21-72 (89)
204 3m9j_A Thioredoxin; oxidoreduc 92.2 0.16 5.6E-06 33.3 4.1 32 11-42 19-50 (105)
205 2i81_A 2-Cys peroxiredoxin; st 92.2 0.95 3.2E-05 34.4 8.9 40 11-51 51-91 (213)
206 3ctg_A Glutaredoxin-2; reduced 92.1 0.13 4.3E-06 36.3 3.6 55 149-206 55-112 (129)
207 3aps_A DNAJ homolog subfamily 92.1 0.28 9.7E-06 33.3 5.4 37 12-50 21-57 (122)
208 2k8s_A Thioredoxin; dimer, str 92.1 0.078 2.7E-06 33.6 2.2 31 178-208 46-77 (80)
209 3zyw_A Glutaredoxin-3; metal b 92.1 0.18 6.2E-06 34.5 4.2 54 146-206 35-89 (111)
210 2lst_A Thioredoxin; structural 91.3 0.028 9.7E-07 39.0 0.0 39 178-216 69-115 (130)
211 1t1v_A SH3BGRL3, SH3 domain-bi 91.9 0.13 4.6E-06 33.7 3.3 56 146-207 22-79 (93)
212 3f3q_A Thioredoxin-1; His TAG, 91.8 0.2 6.9E-06 33.5 4.3 37 178-215 68-108 (109)
213 1wik_A Thioredoxin-like protei 91.7 0.14 4.7E-06 34.8 3.3 52 145-203 33-85 (109)
214 2klx_A Glutaredoxin; thioredox 91.7 0.13 4.4E-06 33.3 3.0 22 15-36 7-28 (89)
215 2oe3_A Thioredoxin-3; electron 91.6 0.38 1.3E-05 32.6 5.4 31 12-42 30-60 (114)
216 3hdc_A Thioredoxin family prot 91.5 0.43 1.5E-05 34.1 6.0 39 11-50 40-78 (158)
217 2djj_A PDI, protein disulfide- 91.3 0.37 1.3E-05 32.6 5.2 33 11-43 24-56 (121)
218 2dml_A Protein disulfide-isome 91.1 0.29 9.9E-06 33.6 4.6 38 178-215 80-122 (130)
219 1gh2_A Thioredoxin-like protei 91.1 0.47 1.6E-05 31.3 5.5 37 179-216 66-106 (107)
220 1aba_A Glutaredoxin; electron 90.9 0.39 1.3E-05 30.9 4.7 56 146-204 18-81 (87)
221 2e7p_A Glutaredoxin; thioredox 90.8 0.078 2.7E-06 36.0 1.3 34 180-214 66-105 (116)
222 2axo_A Hypothetical protein AT 90.7 0.24 8.3E-06 39.6 4.2 30 11-40 41-70 (270)
223 2khp_A Glutaredoxin; thioredox 90.7 0.19 6.5E-06 32.6 3.1 21 15-35 7-27 (92)
224 3f9u_A Putative exported cytoc 90.7 0.18 6E-06 36.8 3.2 37 180-216 123-165 (172)
225 2wem_A Glutaredoxin-related pr 90.6 0.29 9.8E-06 34.0 4.1 53 146-205 39-93 (118)
226 3dxb_A Thioredoxin N-terminall 90.6 0.33 1.1E-05 37.1 4.9 36 181-216 78-117 (222)
227 2khp_A Glutaredoxin; thioredox 90.5 0.26 8.9E-06 31.9 3.6 51 148-204 22-72 (92)
228 2ht9_A Glutaredoxin-2; thiored 90.4 0.5 1.7E-05 34.0 5.4 55 146-203 63-117 (146)
229 1r7h_A NRDH-redoxin; thioredox 90.2 0.18 6E-06 31.1 2.5 23 14-36 1-23 (75)
230 2hze_A Glutaredoxin-1; thiored 90.2 0.34 1.2E-05 33.0 4.2 23 180-203 68-90 (114)
231 1x5d_A Protein disulfide-isome 90.1 0.49 1.7E-05 32.5 5.0 31 12-42 25-55 (133)
232 3qmx_A Glutaredoxin A, glutare 90.0 0.29 1E-05 32.6 3.6 29 8-36 10-38 (99)
233 2cq9_A GLRX2 protein, glutared 89.9 0.52 1.8E-05 33.0 5.1 54 147-203 42-95 (130)
234 1zma_A Bacterocin transport ac 89.9 0.31 1.1E-05 32.9 3.8 30 13-42 30-59 (118)
235 3rhb_A ATGRXC5, glutaredoxin-C 89.9 0.69 2.3E-05 31.2 5.5 57 146-205 33-90 (113)
236 3ph9_A Anterior gradient prote 89.7 0.21 7.2E-06 36.3 2.8 36 180-215 93-140 (151)
237 3fk8_A Disulphide isomerase; A 89.7 0.54 1.9E-05 32.4 5.0 38 179-216 80-132 (133)
238 2ct6_A SH3 domain-binding glut 89.6 0.34 1.2E-05 33.0 3.8 38 13-54 7-46 (111)
239 2yj7_A LPBCA thioredoxin; oxid 89.2 0.065 2.2E-06 35.2 0.0 32 11-42 18-49 (106)
240 1h75_A Glutaredoxin-like prote 89.6 0.21 7.2E-06 31.4 2.5 23 14-36 1-23 (81)
241 2lrt_A Uncharacterized protein 89.3 0.58 2E-05 33.3 5.0 40 11-51 34-73 (152)
242 3ic4_A Glutaredoxin (GRX-1); s 89.3 0.15 5.1E-06 33.1 1.7 22 15-36 13-34 (92)
243 1aba_A Glutaredoxin; electron 89.3 0.3 1E-05 31.4 3.2 32 16-55 2-37 (87)
244 3gx8_A Monothiol glutaredoxin- 89.2 0.35 1.2E-05 33.6 3.6 55 146-206 35-92 (121)
245 1hyu_A AHPF, alkyl hydroperoxi 89.2 0.43 1.5E-05 41.6 5.0 39 176-214 159-197 (521)
246 2f51_A Thioredoxin; electron t 89.2 0.36 1.2E-05 32.9 3.6 30 12-41 23-52 (118)
247 1mek_A Protein disulfide isome 89.1 0.38 1.3E-05 32.2 3.7 32 12-43 24-55 (120)
248 1qgv_A Spliceosomal protein U5 89.1 0.5 1.7E-05 33.5 4.4 31 12-42 23-53 (142)
249 3aps_A DNAJ homolog subfamily 88.9 0.28 9.7E-06 33.3 2.9 39 178-216 66-112 (122)
250 2j23_A Thioredoxin; immune pro 88.8 0.36 1.2E-05 32.9 3.4 32 11-42 32-63 (121)
251 3idv_A Protein disulfide-isome 88.5 0.75 2.6E-05 35.1 5.5 40 177-216 194-236 (241)
252 2xc2_A Thioredoxinn; oxidoredu 88.5 0.65 2.2E-05 31.2 4.6 31 11-41 32-62 (117)
253 2f51_A Thioredoxin; electron t 88.5 0.9 3.1E-05 30.8 5.3 36 179-215 68-111 (118)
254 3nzn_A Glutaredoxin; structura 88.5 0.34 1.2E-05 32.3 3.1 24 13-36 21-44 (103)
255 2djj_A PDI, protein disulfide- 88.1 0.48 1.6E-05 32.0 3.7 33 184-216 78-116 (121)
256 2ct6_A SH3 domain-binding glut 88.0 0.58 2E-05 31.8 4.0 54 147-204 29-88 (111)
257 2dbc_A PDCL2, unnamed protein 88.0 0.72 2.5E-05 32.2 4.6 29 13-41 31-59 (135)
258 1wou_A Thioredoxin -related pr 87.9 0.94 3.2E-05 30.9 5.1 37 12-50 24-67 (123)
259 1fov_A Glutaredoxin 3, GRX3; a 87.8 0.37 1.3E-05 30.2 2.8 22 15-36 2-23 (82)
260 3d22_A TRXH4, thioredoxin H-ty 87.6 0.99 3.4E-05 31.3 5.2 37 12-51 46-82 (139)
261 2dj1_A Protein disulfide-isome 86.9 0.57 1.9E-05 32.5 3.6 32 12-43 34-65 (140)
262 3evi_A Phosducin-like protein 86.9 0.55 1.9E-05 32.4 3.4 34 181-214 67-111 (118)
263 1wmj_A Thioredoxin H-type; str 86.9 0.25 8.7E-06 33.8 1.7 32 11-42 35-66 (130)
264 3idv_A Protein disulfide-isome 86.7 0.93 3.2E-05 34.5 5.0 39 178-216 80-121 (241)
265 1wmj_A Thioredoxin H-type; str 86.6 0.17 5.7E-06 34.8 0.6 63 144-216 54-121 (130)
266 3dxb_A Thioredoxin N-terminall 86.1 0.86 2.9E-05 34.8 4.5 39 11-51 29-67 (222)
267 1wjk_A C330018D20RIK protein; 86.0 0.29 9.9E-06 32.6 1.5 27 10-36 13-39 (100)
268 1ttz_A Conserved hypothetical 85.3 0.47 1.6E-05 30.9 2.3 24 14-37 1-24 (87)
269 1rw1_A Conserved hypothetical 85.2 0.63 2.1E-05 31.8 3.0 32 16-55 2-33 (114)
270 2lst_A Thioredoxin; structural 85.4 0.17 5.8E-06 34.9 0.0 36 7-42 14-52 (130)
271 1x5e_A Thioredoxin domain cont 85.0 1.3 4.3E-05 30.1 4.6 35 15-50 25-59 (126)
272 2k6v_A Putative cytochrome C o 84.7 1.1 3.6E-05 32.2 4.2 42 11-52 34-78 (172)
273 2r2j_A Thioredoxin domain-cont 84.7 1.6 5.5E-05 36.2 5.8 39 178-216 73-116 (382)
274 2hze_A Glutaredoxin-1; thiored 84.6 0.93 3.2E-05 30.7 3.7 22 14-35 19-40 (114)
275 3l78_A Regulatory protein SPX; 84.3 1 3.5E-05 31.1 3.8 32 16-55 2-33 (120)
276 2qc7_A ERP31, ERP28, endoplasm 83.9 1.6 5.3E-05 34.2 5.1 39 177-215 71-117 (240)
277 3gkx_A Putative ARSC family re 83.8 0.58 2E-05 32.5 2.3 34 14-55 4-37 (120)
278 2dj3_A Protein disulfide-isome 83.7 0.78 2.7E-05 31.5 3.0 37 180-216 74-117 (133)
279 2djk_A PDI, protein disulfide- 83.7 0.96 3.3E-05 31.5 3.5 38 179-216 68-114 (133)
280 2dj0_A Thioredoxin-related tra 83.7 1.5 5.2E-05 30.3 4.6 30 13-42 27-56 (137)
281 2dbc_A PDCL2, unnamed protein 83.5 2.1 7.3E-05 29.7 5.3 29 16-45 31-59 (135)
282 3uem_A Protein disulfide-isome 83.3 2.1 7.2E-05 35.0 5.9 40 11-50 266-305 (361)
283 3h8q_A Thioredoxin reductase 3 83.2 0.67 2.3E-05 31.5 2.4 21 15-35 18-38 (114)
284 2yan_A Glutaredoxin-3; oxidore 83.0 0.96 3.3E-05 30.1 3.1 21 16-36 19-44 (105)
285 1wik_A Thioredoxin-like protei 82.7 0.79 2.7E-05 30.9 2.6 21 15-35 16-41 (109)
286 3rhb_A ATGRXC5, glutaredoxin-C 82.7 0.85 2.9E-05 30.7 2.8 22 15-36 20-41 (113)
287 2ywm_A Glutaredoxin-like prote 82.1 2.8 9.7E-05 31.7 5.9 38 11-51 135-172 (229)
288 3f0i_A Arsenate reductase; str 82.1 0.49 1.7E-05 32.8 1.3 34 14-55 4-37 (119)
289 1qgv_A Spliceosomal protein U5 82.0 3.3 0.00011 29.1 5.8 28 17-45 25-52 (142)
290 1kte_A Thioltransferase; redox 82.0 0.82 2.8E-05 30.2 2.5 22 15-36 13-34 (105)
291 2wul_A Glutaredoxin related pr 81.9 1.7 5.8E-05 30.1 4.1 54 147-207 40-95 (118)
292 3fk8_A Disulphide isomerase; A 81.6 1 3.4E-05 31.0 2.9 38 12-51 29-68 (133)
293 2dlx_A UBX domain-containing p 81.5 2.6 8.8E-05 30.5 5.1 40 176-216 90-135 (153)
294 2cq9_A GLRX2 protein, glutared 81.1 1.2 4E-05 31.1 3.1 22 15-36 28-49 (130)
295 3gkn_A Bacterioferritin comigr 80.8 1.7 6E-05 30.8 4.1 41 11-52 34-75 (163)
296 1xvw_A Hypothetical protein RV 80.8 2.1 7.1E-05 30.3 4.5 37 14-51 38-75 (160)
297 3l4n_A Monothiol glutaredoxin- 80.5 2.5 8.7E-05 29.4 4.7 23 183-206 66-88 (127)
298 3us3_A Calsequestrin-1; calciu 80.2 1.7 5.7E-05 36.0 4.2 39 177-215 81-122 (367)
299 1wou_A Thioredoxin -related pr 80.1 0.93 3.2E-05 31.0 2.3 36 179-214 84-122 (123)
300 3rdw_A Putative arsenate reduc 80.1 1.2 4E-05 30.9 2.8 32 16-55 7-38 (121)
301 2ht9_A Glutaredoxin-2; thiored 80.1 1.2 4.2E-05 31.9 2.9 22 15-36 50-71 (146)
302 2wci_A Glutaredoxin-4; redox-a 79.9 1.4 4.6E-05 31.3 3.1 21 15-35 36-61 (135)
303 1u6t_A SH3 domain-binding glut 79.9 0.88 3E-05 31.7 2.0 63 146-209 20-85 (121)
304 1t1v_A SH3BGRL3, SH3 domain-bi 79.5 1.2 4.2E-05 28.9 2.6 13 15-27 3-15 (93)
305 1a8l_A Protein disulfide oxido 79.5 2.1 7E-05 32.3 4.3 32 11-42 133-164 (226)
306 2hls_A Protein disulfide oxido 79.3 1.8 6.3E-05 33.6 4.0 30 12-41 138-167 (243)
307 3l4n_A Monothiol glutaredoxin- 79.3 1.3 4.4E-05 31.0 2.8 21 16-36 16-36 (127)
308 3c1r_A Glutaredoxin-1; oxidize 79.2 2 6.9E-05 29.3 3.7 36 15-55 26-62 (118)
309 3cxg_A Putative thioredoxin; m 78.8 0.99 3.4E-05 31.3 2.1 28 12-39 40-67 (133)
310 3ctg_A Glutaredoxin-2; reduced 78.7 1.8 6E-05 30.2 3.4 36 15-55 38-74 (129)
311 3zyw_A Glutaredoxin-3; metal b 78.5 1.5 5E-05 29.8 2.8 22 14-35 16-42 (111)
312 3h79_A Thioredoxin-like protei 78.4 2.4 8.2E-05 28.8 4.0 30 12-41 33-62 (127)
313 3iv4_A Putative oxidoreductase 78.4 1.6 5.5E-05 29.9 2.9 36 177-212 70-111 (112)
314 3emx_A Thioredoxin; structural 78.3 1.6 5.5E-05 30.2 3.1 28 14-41 33-60 (135)
315 3gix_A Thioredoxin-like protei 78.1 2.1 7.3E-05 30.3 3.8 33 11-43 22-54 (149)
316 3fz4_A Putative arsenate reduc 78.1 2.6 8.9E-05 29.1 4.0 34 15-56 4-37 (120)
317 2qgv_A Hydrogenase-1 operon pr 77.8 1.8 6.3E-05 30.9 3.2 33 11-43 34-67 (140)
318 1sji_A Calsequestrin 2, calseq 77.7 2 6.7E-05 35.2 3.9 38 178-215 80-120 (350)
319 3ed3_A Protein disulfide-isome 77.7 2.5 8.6E-05 33.9 4.5 38 177-214 81-139 (298)
320 3ipz_A Monothiol glutaredoxin- 77.3 1.4 4.9E-05 29.7 2.5 21 15-35 19-44 (109)
321 3evi_A Phosducin-like protein 77.3 5 0.00017 27.4 5.4 29 14-42 25-53 (118)
322 1a0r_P Phosducin, MEKA, PP33; 77.2 3.9 0.00013 32.0 5.3 31 12-42 133-163 (245)
323 2fwh_A Thiol:disulfide interch 77.1 2.3 7.8E-05 29.3 3.6 31 12-42 31-64 (134)
324 2lus_A Thioredoxion; CR-Trp16, 78.5 0.5 1.7E-05 32.8 0.0 29 14-42 28-56 (143)
325 3zzx_A Thioredoxin; oxidoreduc 76.2 4.3 0.00015 26.9 4.7 31 12-42 20-50 (105)
326 1we0_A Alkyl hydroperoxide red 76.2 2.5 8.6E-05 30.9 3.8 40 11-51 30-70 (187)
327 1s3c_A Arsenate reductase; ARS 76.1 1.2 4.2E-05 31.7 1.9 33 15-55 3-35 (141)
328 2jsy_A Probable thiol peroxida 75.3 2.7 9.3E-05 30.0 3.7 37 13-52 45-82 (167)
329 2wem_A Glutaredoxin-related pr 75.2 1.7 6E-05 29.9 2.5 21 15-35 21-46 (118)
330 2trc_P Phosducin, MEKA, PP33; 75.1 3.6 0.00012 31.4 4.5 30 13-42 121-150 (217)
331 2wul_A Glutaredoxin related pr 75.1 2.1 7.1E-05 29.6 2.8 21 15-35 21-46 (118)
332 2e7p_A Glutaredoxin; thioredox 74.8 2.2 7.6E-05 28.4 2.9 22 16-37 22-43 (116)
333 2ls5_A Uncharacterized protein 76.8 0.61 2.1E-05 33.2 0.0 32 11-42 32-64 (159)
334 3gx8_A Monothiol glutaredoxin- 74.7 2.4 8.3E-05 29.2 3.1 22 15-36 17-43 (121)
335 1u6t_A SH3 domain-binding glut 74.0 3.4 0.00012 28.7 3.7 36 16-55 2-39 (121)
336 1zof_A Alkyl hydroperoxide-red 73.8 2.3 7.8E-05 31.5 3.0 40 11-51 32-72 (198)
337 1hyu_A AHPF, alkyl hydroperoxi 73.3 4.6 0.00016 35.0 5.2 36 12-50 117-152 (521)
338 1qmv_A Human thioredoxin perox 72.6 3.9 0.00013 30.2 4.1 40 11-51 33-73 (197)
339 2trc_P Phosducin, MEKA, PP33; 72.5 1.6 5.6E-05 33.4 2.0 36 179-214 164-210 (217)
340 1uul_A Tryparedoxin peroxidase 71.9 4.1 0.00014 30.3 4.1 40 11-51 35-75 (202)
341 3kp8_A Vkorc1/thioredoxin doma 71.9 0.77 2.6E-05 30.8 -0.1 30 12-41 12-41 (106)
342 2kuc_A Putative disulphide-iso 71.8 2.9 9.8E-05 28.3 3.0 23 12-34 27-49 (130)
343 3ed3_A Protein disulfide-isome 71.4 6.2 0.00021 31.6 5.3 38 12-51 35-72 (298)
344 2lrt_A Uncharacterized protein 71.4 2.1 7E-05 30.3 2.2 33 179-211 105-142 (152)
345 3ztl_A Thioredoxin peroxidase; 71.3 4.3 0.00015 30.8 4.1 41 11-52 68-109 (222)
346 3q6o_A Sulfhydryl oxidase 1; p 70.3 5.9 0.0002 30.3 4.8 38 177-215 79-125 (244)
347 1nm3_A Protein HI0572; hybrid, 70.0 3.9 0.00013 31.4 3.7 51 146-203 184-234 (241)
348 1oaz_A Thioredoxin 1; immune s 69.8 1.8 6.2E-05 29.5 1.5 32 11-42 20-65 (123)
349 2es7_A Q8ZP25_salty, putative 69.7 3.6 0.00012 29.1 3.2 28 14-41 37-65 (142)
350 2qsi_A Putative hydrogenase ex 69.3 4 0.00014 28.9 3.3 35 13-50 35-71 (137)
351 1nm3_A Protein HI0572; hybrid, 69.2 3.7 0.00013 31.5 3.3 25 12-36 168-192 (241)
352 2jad_A Yellow fluorescent prot 69.0 4.4 0.00015 33.7 3.9 51 151-204 281-334 (362)
353 2c0g_A ERP29 homolog, windbeut 68.9 6 0.00021 31.0 4.5 39 177-215 83-130 (248)
354 1zye_A Thioredoxin-dependent p 67.8 5 0.00017 30.4 3.8 39 12-51 56-95 (220)
355 3f8u_A Protein disulfide-isome 67.7 9.1 0.00031 32.5 5.8 40 12-51 370-409 (481)
356 3ga4_A Dolichyl-diphosphooligo 67.6 4.9 0.00017 29.8 3.6 39 176-214 92-150 (178)
357 1z6n_A Hypothetical protein PA 67.2 10 0.00035 27.5 5.3 37 12-51 54-90 (167)
358 2h01_A 2-Cys peroxiredoxin; th 66.9 3.9 0.00013 30.1 2.9 40 11-51 30-70 (192)
359 2npb_A Selenoprotein W; struct 66.4 7 0.00024 25.9 3.8 39 13-51 2-40 (96)
360 2b5e_A Protein disulfide-isome 66.4 8.4 0.00029 33.0 5.4 32 12-43 31-62 (504)
361 2da7_A Zinc finger homeobox pr 66.2 6.9 0.00024 24.4 3.4 33 129-162 17-49 (71)
362 2yzh_A Probable thiol peroxida 65.0 7.7 0.00026 27.7 4.2 37 12-51 47-84 (171)
363 2djk_A PDI, protein disulfide- 65.0 9.5 0.00033 26.1 4.6 36 15-53 26-61 (133)
364 2a4v_A Peroxiredoxin DOT5; yea 64.5 25 0.00085 24.5 6.9 52 144-205 78-139 (159)
365 2pn8_A Peroxiredoxin-4; thiore 64.3 7.3 0.00025 29.3 4.1 41 11-52 47-88 (211)
366 1z9h_A Membrane-associated pro 64.0 5.6 0.00019 31.4 3.5 29 6-34 5-33 (290)
367 2c0d_A Thioredoxin peroxidase 63.8 5.3 0.00018 30.5 3.2 41 11-52 55-96 (221)
368 3hdc_A Thioredoxin family prot 63.7 17 0.00059 25.2 5.9 36 178-213 106-148 (158)
369 3ira_A Conserved protein; meth 62.8 9.4 0.00032 28.0 4.3 14 183-196 100-116 (173)
370 3ixr_A Bacterioferritin comigr 61.8 12 0.0004 27.1 4.8 39 13-52 53-91 (179)
371 1q98_A Thiol peroxidase, TPX; 60.8 14 0.00047 26.2 5.0 36 13-51 44-80 (165)
372 3t58_A Sulfhydryl oxidase 1; o 59.6 10 0.00035 33.0 4.7 39 178-216 80-126 (519)
373 3f8u_A Protein disulfide-isome 57.5 13 0.00046 31.4 5.0 34 11-44 20-53 (481)
374 2r2j_A Thioredoxin domain-cont 57.3 15 0.0005 30.3 5.1 31 12-42 22-52 (382)
375 2a4v_A Peroxiredoxin DOT5; yea 57.2 20 0.00068 25.0 5.2 31 14-44 37-68 (159)
376 2p0g_A Selenoprotein W-related 56.4 25 0.00086 23.6 5.2 42 12-54 2-43 (105)
377 3dml_A Putative uncharacterize 56.1 6.8 0.00023 26.8 2.4 27 9-35 15-41 (116)
378 1psq_A Probable thiol peroxida 55.6 14 0.00049 26.0 4.2 37 12-51 42-79 (163)
379 1xvq_A Thiol peroxidase; thior 55.5 16 0.00054 26.2 4.5 36 12-51 44-80 (175)
380 3p7x_A Probable thiol peroxida 55.3 32 0.0011 24.2 6.1 62 143-214 86-165 (166)
381 1a0r_P Phosducin, MEKA, PP33; 54.9 10 0.00034 29.6 3.5 36 179-214 177-223 (245)
382 3zrd_A Thiol peroxidase; oxido 54.6 18 0.00062 26.8 4.8 37 12-51 78-115 (200)
383 2ju5_A Thioredoxin disulfide i 54.3 9.5 0.00032 26.9 3.0 28 12-39 47-78 (154)
384 2jxu_A TERB, KP-TERB; tellurit 54.3 18 0.0006 25.6 4.5 42 121-162 107-149 (153)
385 1we0_A Alkyl hydroperoxide red 53.8 15 0.00051 26.6 4.2 38 179-216 104-156 (187)
386 1sen_A Thioredoxin-like protei 53.8 11 0.00037 27.0 3.3 32 185-216 101-147 (164)
387 2h5n_A Hypothetical protein PG 53.0 12 0.00042 26.1 3.4 43 120-162 80-123 (133)
388 1zof_A Alkyl hydroperoxide-red 52.4 17 0.00058 26.6 4.3 38 179-216 109-160 (198)
389 1wi3_A DNA-binding protein SAT 52.4 17 0.0006 22.5 3.5 32 130-162 20-52 (71)
390 1n8j_A AHPC, alkyl hydroperoxi 51.6 9.8 0.00034 27.8 2.8 39 12-51 30-69 (186)
391 3kzx_A HAD-superfamily hydrola 51.5 57 0.002 23.7 7.3 67 142-217 159-230 (231)
392 4gqc_A Thiol peroxidase, perox 51.0 62 0.0021 22.8 7.3 65 142-216 75-159 (164)
393 3vln_A GSTO-1, glutathione S-t 51.0 21 0.00073 26.8 4.8 23 13-35 21-43 (241)
394 2qc7_A ERP31, ERP28, endoplasm 50.9 16 0.00053 28.4 4.0 26 23-49 32-57 (240)
395 3q18_A GSTO-2, glutathione S-t 50.6 17 0.00058 27.4 4.1 22 13-34 21-42 (239)
396 2oka_A Hypothetical protein; P 50.5 44 0.0015 22.3 5.6 42 12-54 4-45 (104)
397 2b5e_A Protein disulfide-isome 49.9 13 0.00044 31.8 3.7 31 12-42 376-406 (504)
398 1sen_A Thioredoxin-like protei 49.7 8.8 0.0003 27.5 2.2 27 13-39 47-73 (164)
399 3t76_A VANU, transcriptional r 48.9 16 0.00056 23.4 3.2 26 136-162 57-82 (88)
400 3omt_A Uncharacterized protein 48.5 18 0.00063 21.6 3.4 27 136-162 41-67 (73)
401 2ec4_A FAS-associated factor 1 47.6 30 0.001 25.4 4.9 35 181-215 124-166 (178)
402 2av4_A Thioredoxin-like protei 46.5 35 0.0012 24.7 5.0 31 13-43 42-72 (160)
403 2yv9_A Chloride intracellular 45.6 44 0.0015 26.3 6.0 28 7-34 11-47 (291)
404 1xvw_A Hypothetical protein RV 45.3 33 0.0011 23.7 4.7 66 142-215 78-158 (160)
405 2ewt_A BLDD, putative DNA-bind 45.0 23 0.0008 20.8 3.4 27 136-162 43-69 (71)
406 3qpm_A Peroxiredoxin; oxidored 45.0 28 0.00096 26.6 4.6 38 13-51 79-116 (240)
407 1zye_A Thioredoxin-dependent p 44.6 34 0.0012 25.6 5.0 38 179-216 132-184 (220)
408 3apo_A DNAJ homolog subfamily 44.3 23 0.00078 32.1 4.6 33 11-43 132-164 (780)
409 3gkn_A Bacterioferritin comigr 43.9 76 0.0026 21.8 9.1 65 141-215 76-160 (163)
410 2ojl_A Hypothetical protein; B 43.9 40 0.0014 22.7 4.6 43 11-54 6-48 (108)
411 3ga4_A Dolichyl-diphosphooligo 43.7 25 0.00086 25.9 3.9 35 8-42 34-74 (178)
412 4g10_A Glutathione S-transfera 43.5 17 0.00058 28.2 3.2 20 15-34 6-25 (265)
413 3uma_A Hypothetical peroxiredo 43.5 18 0.00062 26.5 3.2 39 11-50 56-96 (184)
414 3kz3_A Repressor protein CI; f 43.4 27 0.00093 21.3 3.6 27 136-162 45-71 (80)
415 3bs3_A Putative DNA-binding pr 43.3 29 0.00098 20.6 3.7 27 136-162 43-69 (76)
416 2cz2_A Maleylacetoacetate isom 43.3 11 0.00038 28.1 2.0 24 9-32 6-29 (223)
417 1tp9_A Peroxiredoxin, PRX D (t 43.3 13 0.00044 26.4 2.2 38 12-50 36-75 (162)
418 3uem_A Protein disulfide-isome 43.2 35 0.0012 27.5 5.2 38 13-52 136-173 (361)
419 1yy7_A SSPA, stringent starvat 43.1 23 0.00079 26.0 3.8 20 15-34 10-29 (213)
420 2wfc_A Peroxiredoxin 5, PRDX5; 42.9 17 0.00058 26.1 2.9 38 12-50 32-71 (167)
421 3qcp_A QSOX from trypanosoma b 42.7 32 0.0011 29.5 5.0 31 13-43 43-73 (470)
422 4hoj_A REGF protein; GST, glut 42.7 19 0.00063 26.5 3.2 19 16-34 4-22 (210)
423 2pwj_A Mitochondrial peroxired 42.7 8.9 0.0003 27.7 1.3 36 12-48 44-80 (171)
424 1y7y_A C.AHDI; helix-turn-heli 42.2 30 0.001 20.4 3.6 27 136-162 46-72 (74)
425 2h01_A 2-Cys peroxiredoxin; th 42.1 34 0.0011 24.8 4.5 38 179-216 107-158 (192)
426 3ir4_A Glutaredoxin 2; glutath 41.9 18 0.00062 26.7 3.0 21 15-35 3-23 (218)
427 3kev_A Galieria sulfuraria DCU 41.5 31 0.001 26.0 4.2 63 127-189 8-78 (199)
428 2c0d_A Thioredoxin peroxidase 41.2 91 0.0031 23.3 7.0 67 142-216 98-183 (221)
429 3iv4_A Putative oxidoreductase 40.8 33 0.0011 23.3 3.8 37 12-52 24-60 (112)
430 2xi8_A Putative transcription 39.9 26 0.00089 20.1 3.0 27 136-162 34-60 (66)
431 3vk9_A Glutathione S-transfera 39.7 18 0.00063 26.8 2.7 18 14-31 1-18 (216)
432 2g2q_A Glutaredoxin-2; thiored 39.5 14 0.00048 25.4 1.7 39 13-55 2-41 (124)
433 2php_A Uncharacterized protein 39.2 62 0.0021 24.2 5.5 93 103-212 73-175 (192)
434 2pb9_A Phosphomethylpyrimidine 39.0 40 0.0014 25.3 4.4 95 103-212 72-184 (195)
435 4gba_A DCN1-like protein 3; E3 38.8 19 0.00065 27.6 2.6 62 128-189 8-77 (221)
436 4eo3_A Bacterioferritin comigr 38.7 46 0.0016 26.8 5.1 66 140-215 60-137 (322)
437 3t58_A Sulfhydryl oxidase 1; o 38.1 39 0.0013 29.3 4.8 32 12-43 30-61 (519)
438 2fa8_A Hypothetical protein AT 37.8 56 0.0019 21.8 4.6 41 13-54 7-47 (105)
439 2r4v_A XAP121, chloride intrac 37.7 23 0.00079 26.9 3.1 22 14-35 12-41 (247)
440 2r1j_L Repressor protein C2; p 37.6 25 0.00086 20.3 2.7 27 136-162 38-64 (68)
441 3keb_A Probable thiol peroxida 37.3 64 0.0022 24.6 5.5 67 141-216 89-175 (224)
442 3apo_A DNAJ homolog subfamily 36.6 41 0.0014 30.4 5.0 37 12-50 675-711 (780)
443 3rbt_A Glutathione transferase 35.5 39 0.0013 25.5 4.1 22 13-34 24-45 (246)
444 1qxf_A GR2, 30S ribosomal prot 35.4 7.6 0.00026 23.8 -0.1 12 18-29 4-15 (66)
445 3mjh_B Early endosome antigen 35.3 5.3 0.00018 21.1 -0.7 20 22-41 6-25 (34)
446 2ou3_A Tellurite resistance pr 35.0 18 0.00061 26.0 1.9 37 126-162 96-133 (161)
447 4gib_A Beta-phosphoglucomutase 35.0 47 0.0016 25.0 4.5 45 142-195 170-215 (250)
448 1adr_A P22 C2 repressor; trans 34.9 28 0.00096 20.6 2.6 27 136-162 38-64 (76)
449 3n5o_A Glutathione transferase 34.8 28 0.00096 26.0 3.1 21 14-34 8-28 (235)
450 1uul_A Tryparedoxin peroxidase 34.5 33 0.0011 25.1 3.4 67 142-216 78-164 (202)
451 3f9u_A Putative exported cytoc 34.3 35 0.0012 24.1 3.4 22 11-32 46-67 (172)
452 2c0g_A ERP29 homolog, windbeut 33.4 37 0.0013 26.3 3.6 27 13-42 35-61 (248)
453 3j20_W 30S ribosomal protein S 33.4 7.8 0.00027 23.5 -0.3 12 18-29 12-23 (63)
454 1xg8_A Hypothetical protein SA 33.3 64 0.0022 21.6 4.1 27 188-214 80-106 (111)
455 3p7x_A Probable thiol peroxida 33.3 35 0.0012 24.0 3.3 36 12-51 47-82 (166)
456 3lfp_A CSP231I C protein; tran 33.0 42 0.0014 21.4 3.4 27 136-162 38-64 (98)
457 1qmv_A Human thioredoxin perox 33.0 70 0.0024 23.1 5.0 37 179-215 110-161 (197)
458 2lbf_A 60S acidic ribosomal pr 32.1 82 0.0028 19.2 4.3 35 138-173 19-60 (69)
459 3tjj_A Peroxiredoxin-4; thiore 31.9 38 0.0013 26.2 3.5 39 12-51 91-130 (254)
460 3b7h_A Prophage LP1 protein 11 31.8 39 0.0013 20.1 2.9 27 136-162 40-67 (78)
461 3f6w_A XRE-family like protein 31.8 32 0.0011 21.0 2.5 27 136-162 47-73 (83)
462 4f9z_D Endoplasmic reticulum r 31.7 83 0.0028 23.4 5.4 38 13-52 132-169 (227)
463 3mlf_A Transcriptional regulat 31.5 59 0.002 21.4 4.0 27 136-162 56-82 (111)
464 2kpj_A SOS-response transcript 31.1 36 0.0012 21.5 2.8 27 136-162 42-68 (94)
465 2jad_A Yellow fluorescent prot 31.0 17 0.0006 30.1 1.4 20 13-32 260-279 (362)
466 2x8g_A Thioredoxin glutathione 30.8 48 0.0016 28.9 4.3 54 146-202 32-85 (598)
467 1rpq_W Peptide E131; receptor- 30.7 16 0.00053 17.2 0.6 6 23-28 2-8 (26)
468 2ofy_A Putative XRE-family tra 30.5 33 0.0011 21.1 2.5 27 136-162 47-74 (86)
469 1prx_A HORF6; peroxiredoxin, h 30.4 65 0.0022 24.2 4.5 38 13-51 33-70 (224)
470 4ikh_A Glutathione S-transfera 30.2 64 0.0022 24.1 4.5 20 14-34 21-40 (244)
471 3mng_A Peroxiredoxin-5, mitoch 30.1 21 0.00072 25.9 1.6 39 11-50 43-82 (173)
472 3s8q_A R-M controller protein; 29.7 36 0.0012 20.7 2.5 27 136-162 44-70 (82)
473 1lmb_3 Protein (lambda repress 29.5 59 0.002 20.1 3.6 27 136-162 50-76 (92)
474 3a1y_A 50S ribosomal protein P 29.5 78 0.0027 18.6 3.8 24 138-162 13-36 (58)
475 2b5a_A C.BCLI; helix-turn-heli 28.8 44 0.0015 19.8 2.8 27 136-162 43-69 (77)
476 3qq6_A HTH-type transcriptiona 28.8 36 0.0012 20.7 2.4 27 136-162 43-70 (78)
477 3lyk_A Stringent starvation pr 27.9 57 0.0019 23.9 3.8 20 16-35 7-26 (216)
478 2x8g_A Thioredoxin glutathione 27.8 30 0.001 30.3 2.4 23 14-36 18-40 (598)
479 1k0d_A URE2 protein; nitrate a 27.5 45 0.0015 25.4 3.2 19 14-32 18-36 (260)
480 3lyp_A Stringent starvation pr 27.2 39 0.0013 24.8 2.7 20 15-34 8-27 (215)
481 2hlg_A Fruit-specific protein; 27.2 13 0.00044 19.7 -0.0 8 22-29 16-23 (39)
482 3m1g_A Putative glutathione S- 27.2 35 0.0012 28.2 2.6 23 13-35 59-81 (362)
483 4glt_A Glutathione S-transfera 26.6 52 0.0018 24.4 3.4 18 17-34 24-41 (225)
484 3kp9_A Vkorc1/thioredoxin doma 26.3 20 0.00069 28.7 1.0 27 14-40 199-225 (291)
485 2yv7_A CG10997-PA, LD46306P, C 26.2 1.4E+02 0.0047 22.8 5.9 29 23-55 39-67 (260)
486 4dcc_A Putative haloacid dehal 26.1 1.1E+02 0.0039 22.1 5.3 47 140-195 171-218 (229)
487 1x57_A Endothelial differentia 25.9 57 0.002 20.3 3.0 27 136-162 46-72 (91)
488 3bq3_A Defective in cullin ned 25.9 98 0.0034 24.4 4.9 60 124-185 72-140 (270)
489 4g2e_A Peroxiredoxin; redox pr 25.9 10 0.00036 26.8 -0.8 37 13-50 32-68 (157)
490 1r5a_A Glutathione transferase 25.9 52 0.0018 24.1 3.2 20 15-34 2-21 (218)
491 2k9q_A Uncharacterized protein 25.3 39 0.0013 20.3 2.0 27 136-162 35-61 (77)
492 4id0_A Glutathione S-transfera 25.1 70 0.0024 23.2 3.8 21 15-35 2-22 (214)
493 3g5g_A Regulatory protein; tra 25.1 46 0.0016 21.5 2.5 27 136-162 61-87 (99)
494 3u5c_b RP61, YS20, 40S ribosom 24.7 14 0.00049 23.6 -0.2 13 17-29 30-42 (82)
495 2xzm_6 RPS27E; ribosome, trans 24.3 14 0.00048 23.5 -0.3 13 17-29 28-40 (81)
496 3qwg_A ESX-1 secretion-associa 24.0 76 0.0026 21.6 3.5 43 136-180 49-92 (123)
497 3kbb_A Phosphorylated carbohyd 24.0 95 0.0032 22.3 4.4 41 141-187 139-180 (216)
498 3ph9_A Anterior gradient prote 23.7 54 0.0019 23.1 2.8 24 13-36 45-68 (151)
499 3ivp_A Putative transposon-rel 23.5 1.1E+02 0.0038 20.3 4.3 27 136-162 45-71 (126)
500 2l82_A Designed protein OR32; 23.4 1.7E+02 0.0059 19.6 5.8 41 143-185 10-53 (162)
No 1
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=100.00 E-value=1.1e-44 Score=291.53 Aligned_cols=202 Identities=30% Similarity=0.484 Sum_probs=187.6
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCC-CChHHHHHhhhCC---cHHHHHHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEG-VNKKDFYENKFGS---QNQGIIARMTE 88 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g-~~~~~~~~~~~~~---~~~~~~~~~~~ 88 (217)
+++|++|+|+.|||||++.++|++++++|+.+.+++|+||||.|++..+..| .+..+++.+++|. +..+++.++.+
T Consensus 2 ~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~~r 81 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGA 81 (239)
T ss_dssp CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999998876678999999999999987764 5666788888873 67899999999
Q ss_pred HHHhcCCccccCC-CCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCC-HHHHHHHHHHcCCCcccc--cc
Q 027910 89 VFRGLGLEYNMSG-LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGD-KEFLVECARKVGVEGAAE--FL 164 (217)
Q Consensus 89 ~a~~~g~~~~~~~-~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~-~~~L~~ia~~~Gld~~~~--~l 164 (217)
+++.+|++|+++. .+.||..+||++.+|+.+|. .++++++||+++|.+|+++++ .++|.++++++|||.+++ .+
T Consensus 82 ~a~~~Gl~f~~~~~~~~nt~~a~r~~~~A~~~g~--~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~l 159 (239)
T 3gl5_A 82 QAAAEGLAYRTRDRDHGSTFDLHRLLHLAKERGR--HEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVL 159 (239)
T ss_dssp HHHHTTCCCCCSSCEECCCHHHHHHHHHHHTTTC--HHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCccCCCCCCCChHHHHHHHHHHHhhCc--HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999876 46899999999999999887 999999999999999999999 999999999999999988 88
Q ss_pred cC-cccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 165 DD-PNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 165 ~~-~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
++ +++++.++++.+.+.++||+|||||+|||+|.++|+++++.|.++|++++
T Consensus 160 ~s~~~~~~~v~~~~~~a~~~Gv~GvPtfvv~g~~~v~Ga~~~e~~~~~i~~~~ 212 (239)
T 3gl5_A 160 ADPAAYADEVRADEREAAQLGATGVPFFVLDRAYGVSGAQPAEVFTQALTQAW 212 (239)
T ss_dssp HCTTTTHHHHHHHHHHHHHTTCCSSSEEEETTTEEEESSCCHHHHHHHHHHHH
T ss_pred cCcHhHHHHHHHHHHHHHHCCCCeeCeEEECCcEeecCCCCHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999989999999999999999875
No 2
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=8.1e-43 Score=273.97 Aligned_cols=194 Identities=17% Similarity=0.215 Sum_probs=166.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFR 91 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~ 91 (217)
+.++|++|+|+.|||||++.++|+++++++ +++|+||||.|++..+..|........ .+..+++.++.++++
T Consensus 3 ~~~~I~~~~D~~cPwcyi~~~~l~~~~~~~----~~~v~~~p~~L~~~~~~~g~~~~~~~~----~k~~~~~~~~~r~a~ 74 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFAAQRIEALAAEL----GRTVLWRPYMLGAAFSVTGARGLSSTP----LKRDYAQRDWARIAR 74 (202)
T ss_dssp CCSCEEEEECTTCHHHHHHHTTHHHHHHHH----TCCEEEEECTTC----------CCSHH----HHHHHHHHHHHHHHH
T ss_pred CCceeEEEEeCCCHHHHHHHHHHHHHHHHh----CCeEEEEeeeccchhhhcCCCCcccCc----HHHHHHHHHHHHHHH
Confidence 456899999999999999999999999854 699999999999988766543221111 267889999999999
Q ss_pred hcCCccccCCC-CCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cccCcc
Q 027910 92 GLGLEYNMSGL-TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FLDDPN 168 (217)
Q Consensus 92 ~~g~~~~~~~~-~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l~~~~ 168 (217)
.+|++|+++.. +.||..++|++.+|+.+|+++..+++++||+++|.+|+++++.++|.++++++|||.+++ .+++++
T Consensus 75 ~~G~~f~~~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~ 154 (202)
T 3fz5_A 75 QRGLTFRPPADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIADPA 154 (202)
T ss_dssp HHTCCCCCCTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTCHH
T ss_pred HhCCCCCCCCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHH
Confidence 99999998754 569999999999999998666999999999999999999999999999999999999988 899999
Q ss_pred cchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHH
Q 027910 169 SGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 169 ~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~ 214 (217)
+++.++++.+.+.++||+|||||+|||+ .++|.++++.|++.|..
T Consensus 155 ~~~~v~~~~~~a~~~Gv~GvPtfvv~g~-~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 155 LKETVRKIGEDAVARGIFGSPFFLVDDE-PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHHHHHHHHTTCCSSSEEEETTE-EEESGGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCcCCEEEECCE-EEecCCCHHHHHHHHhc
Confidence 9999999999999999999999999998 78999999999999864
No 3
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=100.00 E-value=3e-40 Score=264.89 Aligned_cols=197 Identities=13% Similarity=0.183 Sum_probs=166.6
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFR 91 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~ 91 (217)
.+++|++|+|+.|||||++.++|.++++ .++++|+|+||.|++..+..|...+. ....+..|++.++.++++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~~~L~~~~~----~~~v~v~~~p~~L~~~~~~~g~~~~~----~~~~k~~y~~~~~~r~a~ 75 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGFEILCRYQN----IWNINLQLRPSLITGIMKDSGNKPPG----LLPRKGLYMANDLKLLRH 75 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHTT----TSSEEEEEEECCHHHHCC----CCCS----SSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHHHH----HcCCeEEEEEeecchhhhhcCCCCcc----cChHHHHHHHHHHHHHHH
Confidence 4689999999999999999999998865 45799999999998776554422110 011267889999999999
Q ss_pred hcCCccccCCC-CC-----CcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCc---ccc
Q 027910 92 GLGLEYNMSGL-TG-----NTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEG---AAE 162 (217)
Q Consensus 92 ~~g~~~~~~~~-~~-----~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~---~~~ 162 (217)
.+|++|+++.. +. ||..++|++.+|+.+++++..+++++||+++|.+|+||++.++|.++++++|||. +++
T Consensus 76 ~~G~~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~g~di~d~~~L~~~a~~~GLd~~~~~~~ 155 (234)
T 3rpp_A 76 HLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGL 155 (234)
T ss_dssp HHTCCCCCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHH
T ss_pred HhCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHH
Confidence 99999998754 33 8999999999998776666999999999999999999999999999999999999 444
Q ss_pred --cccCcccchhHHHHHHHHHhCCCCeecEEEEC--Ce-eeecCCCCHHHHHHHHHHHh
Q 027910 163 --FLDDPNSGLNEVHEELKKYSANISGVPHFVLN--GK-HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 163 --~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~--g~-~~~~G~~~~~~l~~~i~~~~ 216 (217)
.++|+++++.++++.+.+.++||+|||||+|| |+ +.++|.+..+.++..|.+.|
T Consensus 156 l~~~~s~~~~~~l~~~~~~a~~~Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~ 214 (234)
T 3rpp_A 156 LEKIATPKVKNQLKETTEAACRYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKW 214 (234)
T ss_dssp HTTTTSHHHHHHHHHHHHHHHHTTCSSSCEEEEEETTEEEEEESSSCHHHHHHHHTCCC
T ss_pred HHHccCHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCcCceeCccCHHHHHHHhcccc
Confidence 55889999999999999999999999999994 75 78999999999999997654
No 4
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=100.00 E-value=8.7e-41 Score=262.44 Aligned_cols=193 Identities=13% Similarity=0.145 Sum_probs=167.7
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHHhc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGL 93 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 93 (217)
|+|++|+|+.|||||++.++|++++++| +++|+||||.|++..+..|...+ ... ....+..++..++.++++.+
T Consensus 1 m~I~~~~D~~CP~cy~~~~~l~~~~~~~----~~~v~~~p~~L~~~~~~~g~~~~-~~~-g~~~~~~~~~~~~~~~a~~~ 74 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLANQRLSKLAQDY----GLTIRYNAIDLARVKIAIGNVGP-SNR-DLKVKLDYLKVDLQRWAQLY 74 (203)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHH----CCEEEEEECCHHHHHHHHTCCSC-CGG-GCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHc----CCeEEEEeeecchhhHhhCCCCc-ccc-cChHHHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999865 48999999988764322221110 000 00125678999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cccCcccch
Q 027910 94 GLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FLDDPNSGL 171 (217)
Q Consensus 94 g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l~~~~~~~ 171 (217)
|++|+++. ++||..+++++.+|+.+|. +++++++||+++|.+|+++++.++|.++++++|||.+++ .++++++++
T Consensus 75 G~~~~~~~-~~~t~~a~r~~~~a~~~g~--~~~~~~~lf~a~~~~~~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~ 151 (203)
T 2imf_A 75 GIPLVFPA-NYNSRRMNIGFYYSGAEAQ--AAAYVNVVFNAVWGEGIAPDLESLPALVSEKLGWDRSAFEHFLSSNAATE 151 (203)
T ss_dssp TCCCCCCS-CCCCHHHHHHGGGCCSHHH--HHHHHHHHHHHHHHSCCCTTCTTHHHHHHHHHTCCHHHHHHHHHSHHHHH
T ss_pred CCCCCCCC-CCChHHHHHHHHHHhCcCh--HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHHHHH
Confidence 99999887 8899999999999988776 999999999999999999999999999999999999998 889999999
Q ss_pred hHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 172 NEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 172 ~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
.++++.+.+.++||+|||||+|||+ .++|.++++.|+++|++++
T Consensus 152 ~v~~~~~~a~~~Gv~G~Ptfvi~g~-~~~G~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 152 RYDEQTHAAIERKVFGVPTMFLGDE-MWWGNDRLFMLESAMGRLC 195 (203)
T ss_dssp HHHHHHHHHHHTTCCSSSEEEETTE-EEESGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCcCCEEEECCE-EEECCCCHHHHHHHHhccc
Confidence 9999999999999999999999998 7899999999999998764
No 5
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.7e-38 Score=249.15 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=166.0
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHHhc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGL 93 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 93 (217)
++|++|+||.|||||+++++|+++.++|+. +++|+|+|+.|.+..+. +..+ .+..++..++.++++.+
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~--~v~v~~~p~~L~~~~~~---~~~~-------~~~~~~~~~~~r~a~~~ 70 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG--VIQFEYVVGGLAPDTNL---PMPP-------EMQQKLEGIWKQIETQL 70 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT--TSEEEEEECCSSCSCCC---BCCH-------HHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC--CceEEEEecccccCCCC---CCCH-------HHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999998863 79999999998765321 1111 14567888889999999
Q ss_pred CCccccC-----CCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cccC
Q 027910 94 GLEYNMS-----GLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FLDD 166 (217)
Q Consensus 94 g~~~~~~-----~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l~~ 166 (217)
|++|+++ ..+.||..++|++.+|+.+|+ .++++++||+++|.+|+++++.++|.++++++|||.+++ .+++
T Consensus 71 G~~f~~~~~~~~~~~~~s~~a~r~~~aa~~~g~--~~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s 148 (208)
T 3kzq_A 71 GTKFNYDFWKLCTPVRSTYQSCRAVIAAGFQDS--YEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDG 148 (208)
T ss_dssp CCCCCTTHHHHSCCBCCCHHHHHHHHHHHTTTC--HHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTS
T ss_pred CCcccHHHHhcCCCcCCcHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHHHHHHhC
Confidence 9999986 346899999999999999998 899999999999999999999999999999999999998 8899
Q ss_pred cccchhHHHHHHHHHhCCCCeecEEEEC--Cee--eecCCCCHHHHHHHHHHHh
Q 027910 167 PNSGLNEVHEELKKYSANISGVPHFVLN--GKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 167 ~~~~~~~~~~~~~a~~~gv~g~Pt~vv~--g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
+++++.+.++.+.+.++||+|||||+|+ |++ .+.|+++++.|.++|+++.
T Consensus 149 ~~~~~~v~~~~~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 149 TLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999995 554 3479999999999998764
No 6
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=100.00 E-value=4.7e-39 Score=256.59 Aligned_cols=196 Identities=12% Similarity=0.141 Sum_probs=165.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFR 91 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~ 91 (217)
.+++|++|+|+.|||||++.++|+++.+ +++++|+||||.|++..+..|... ++. ...+..++..++.++++
T Consensus 4 m~~~I~~~~D~~CP~Cy~~~~~l~~l~~----~~~~~v~~~p~~L~~~~~~~g~~~-~~~---~~~~~~~~~~~~~r~a~ 75 (226)
T 1r4w_A 4 APRVLELFYDVLSPYSWLGFEVLCRYQH----LWNIKLKLRPALLAGIMKDSGNQP-PAM---VPHKGQYILKEIPLLKQ 75 (226)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHTT----TSSEEEEEEECCHHHHHHHTTCCC-TTS---SHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCChHHHHHHHHHHHHHH----HcCCeEEEEeeecccchhccCCCC-ccc---ChHHHHHHHHHHHHHHH
Confidence 5689999999999999999999998765 457999999998876433222111 110 01256888999999999
Q ss_pred hcCCccccCCCC------CCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCc---ccc
Q 027910 92 GLGLEYNMSGLT------GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEG---AAE 162 (217)
Q Consensus 92 ~~g~~~~~~~~~------~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~---~~~ 162 (217)
.+|++|+++..+ .||..+++++.+|+.+|++++++++++||+++|.+|+++++.++|.++++++|||. +++
T Consensus 76 ~~G~~~~~~~~~~~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~~alf~a~~~~~~~i~~~~~L~~~a~~~Gl~~~d~~~~ 155 (226)
T 1r4w_A 76 LFQVPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHL 155 (226)
T ss_dssp HHTCCCCCCSSTTTHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHH
T ss_pred HhCCCCCCCCccccccCCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCchhHHHH
Confidence 999999976432 48999999999999989766899999999999999999999999999999999964 455
Q ss_pred --cccCcccchhHHHHHHHHHhCCCCeecEEEEC----CeeeecCCCCHHHHHHHHHHHh
Q 027910 163 --FLDDPNSGLNEVHEELKKYSANISGVPHFVLN----GKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 163 --~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~----g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
.++++++++.++++.+.+.++||+|||||+|| |+ .+.|.++++.|++.|.+.|
T Consensus 156 ~~~~~s~~~~~~v~~~~~~a~~~gv~G~Ptfvv~~~g~~~-~~~G~~~~~~l~~~l~~~~ 214 (226)
T 1r4w_A 156 LNKISTELVKSKLRETTGAACKYGAFGLPTTVAHVDGKTY-MLFGSDRMELLAYLLGEKW 214 (226)
T ss_dssp HTTTTSHHHHHHHHHHHHHHHHTTCCSSCEEEEEETTEEE-EEESTTCHHHHHHHHTCCC
T ss_pred HHHcCCHHHHHHHHHHHHHHHHCCCCCCCEEEEeCCCCcC-ceeCCCcHHHHHHHhcCcc
Confidence 67799999999999999999999999999999 66 7899999999999987543
No 7
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=100.00 E-value=2.8e-36 Score=238.37 Aligned_cols=194 Identities=13% Similarity=0.156 Sum_probs=163.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVF 90 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 90 (217)
|++++|++|+|+.|||||.+.+.++++.+ +. ..+++|+|+|+.+.+..+. +... .+..++..++.+++
T Consensus 5 m~~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~-~~~v~v~~~~~~l~~~~~~---~~~~-------~~~~~~~~~~~r~a 72 (216)
T 2in3_A 5 MEKPVLWYIADPMCSWCWGFAPVIENIRQ-EY-SAFLTVKIMPGGLRPGTNT---PLLP-------EKRAQILHHWHSVH 72 (216)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHH-HH-TTTCEEEEEECC----CCS---BCCH-------HHHHHHHHHHHHHH
T ss_pred ccceeEEEEECCCCchhhcchHHHHHHHh-cC-CCCeEEEEeecccccCCCC---CCCH-------HHHHHHHHHHHHHH
Confidence 55899999999999999988888887765 43 2469999999998764421 1101 14567888999999
Q ss_pred HhcCCccccC-----CCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--c
Q 027910 91 RGLGLEYNMS-----GLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--F 163 (217)
Q Consensus 91 ~~~g~~~~~~-----~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~ 163 (217)
+.+|++|+++ ..+++|..+++++.+|+.++++++++++++||+++|.+|+++++.++|.++++++|||.+++ +
T Consensus 73 ~~~g~~~~~~~~~~~~~~~~s~~a~r~~~~a~~~~~~~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~ 152 (216)
T 2in3_A 73 ITTGQPFTFENALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPV 152 (216)
T ss_dssp HHHCCCCCCTTCSCTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHCCccChHHHccCCcccCcHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999863 24589999999999999885556999999999999999999999999999999999999988 8
Q ss_pred ccCcccchhHHHHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 164 LDDPNSGLNEVHEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 164 l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
++++++++.+.++.+.+.++||+|||||+| ||++ .+.|.++++.|.++|+++.
T Consensus 153 ~~~~~~~~~v~~~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 153 FQSDEAKQRTLAGFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHSHHHHHHHHHHHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999998 9997 6899999999999998764
No 8
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=100.00 E-value=4e-32 Score=210.02 Aligned_cols=167 Identities=15% Similarity=0.133 Sum_probs=139.6
Q ss_pred ccCcccCCcceEEEEEecccCchhhhhHHHHH-HHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHH
Q 027910 4 SVSSSAGKKLIRIDVSSDTVCPWCFVGKRNLD-KAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGI 82 (217)
Q Consensus 4 ~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~-~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 82 (217)
+...|++..+++|++|+||.|||||.+++.+. .+.++|.+..+++++|+|+++.+
T Consensus 3 ~~~~G~~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p~~~------------------------ 58 (186)
T 3bci_A 3 SATTSSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLG------------------------ 58 (186)
T ss_dssp --------CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECCCSC------------------------
T ss_pred CcCcCCCCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecCcCC------------------------
Confidence 45568889999999999999999999999985 55567875567999999997632
Q ss_pred HHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCccc-
Q 027910 83 IARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAA- 161 (217)
Q Consensus 83 ~~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~- 161 (217)
++|..+++++.++..+|++++++|+++||++.+.++.++.+.+.|.++++++|||.+.
T Consensus 59 ---------------------~~s~~aa~a~~~a~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~ 117 (186)
T 3bci_A 59 ---------------------KDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETE 117 (186)
T ss_dssp ---------------------TTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHH
T ss_pred ---------------------cchHHHHHHHHHHHHhCHHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 1355677888888888877799999999999998888899999999999999999998
Q ss_pred --c--cc--cCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 162 --E--FL--DDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 162 --~--~l--~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
| ++ +++++.+.+.++.+.+.++||+|||||+|||+ .+.|..+++.|.++|+++.
T Consensus 118 ~~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPt~vvnG~-~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 118 NKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGE-KVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHTTCCSSSEEEETTE-ECSCTTCHHHHHHHHHC--
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEECCE-EcCCCCCHHHHHHHHHHHH
Confidence 8 77 88899999999999999999999999999999 5789999999999998653
No 9
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=99.97 E-value=4.4e-31 Score=207.09 Aligned_cols=168 Identities=13% Similarity=0.058 Sum_probs=143.0
Q ss_pred cccCcccCCcceEEEEEecccCchhhhhHHHHH-HHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHH
Q 027910 3 QSVSSSAGKKLIRIDVSSDTVCPWCFVGKRNLD-KAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQG 81 (217)
Q Consensus 3 ~~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~-~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 81 (217)
.+...|++..+++|++|+||.||||+.+++.+. .+.++|.+..+|+++|+|+++.+ +
T Consensus 20 ~~~~~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~----------~------------ 77 (202)
T 3gha_A 20 GQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHG----------K------------ 77 (202)
T ss_dssp TSCEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSH----------H------------
T ss_pred CCceecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccc----------h------------
Confidence 356678899999999999999999999998874 45567875568999999998632 0
Q ss_pred HHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH-cCCCcc
Q 027910 82 IIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARK-VGVEGA 160 (217)
Q Consensus 82 ~~~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~-~Gld~~ 160 (217)
.|..+.+++.++..++++++++|+++||++++.++.++.+.+.|.+++.+ +|||.+
T Consensus 78 -----------------------~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~ 134 (202)
T 3gha_A 78 -----------------------GSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPE 134 (202)
T ss_dssp -----------------------HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHH
T ss_pred -----------------------hHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHH
Confidence 12334555555554455669999999999999999889999999999999 999999
Q ss_pred cc--cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 161 AE--FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 161 ~~--~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+| +++++++.+.+.++.+.+.++||+|||||+|||++ +.|..+++.|.++|+++.
T Consensus 135 ~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvvnG~~-~~G~~~~e~l~~~i~~~~ 191 (202)
T 3gha_A 135 TLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKV-IKNFADYDEIKETIEKEL 191 (202)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEETTEE-CSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEECCEE-ecCCCCHHHHHHHHHHHH
Confidence 98 88999999999999999999999999999999995 899999999999999764
No 10
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=99.97 E-value=8.9e-30 Score=197.59 Aligned_cols=159 Identities=17% Similarity=0.112 Sum_probs=139.2
Q ss_pred cccC-CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHH
Q 027910 7 SSAG-KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIAR 85 (217)
Q Consensus 7 ~~~~-~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (217)
.|++ ..+++|++|+|+.|||||.+++.+.+++++|+. ++++++.|+.+++
T Consensus 19 ~g~~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~~~~--------------------------- 69 (193)
T 2rem_A 19 PFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPAVFGG--------------------------- 69 (193)
T ss_dssp CSSCCTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEECCCST---------------------------
T ss_pred CCCCCCCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCcccCC---------------------------
Confidence 4556 789999999999999999999999999988763 5777777765432
Q ss_pred HHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCC---CCCCHHHHHHHHHHcCCCcccc
Q 027910 86 MTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK---YIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 86 ~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~---~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
++..+++++.+|+.+|. +++++++||+++|.++. ++.+.+.|.+++++.|+|.+++
T Consensus 70 -------------------~s~~a~~a~~~a~~~~~--~~~~~~~lf~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~ 128 (193)
T 2rem_A 70 -------------------VWDPFARAYLAADVLGV--AKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRF 128 (193)
T ss_dssp -------------------THHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTTCCSCSTTCCHHHHHHHHHTTTCCHHHH
T ss_pred -------------------CcHHHHHHHHHHHHcCc--HHHHHHHHHHHHHHhcccCcCCCCHHHHHHHHHHcCCCHHHH
Confidence 23456778888888887 99999999999999998 8999999999999999999988
Q ss_pred --cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 163 --FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 163 --~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+++++++.+.+.++.+.+.++||+|||||+|||++.+.|. +++.|.++|+++.
T Consensus 129 ~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~-~~~~l~~~i~~~~ 183 (193)
T 2rem_A 129 VATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGH-DFEDTLRITDYLV 183 (193)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHCCSSSSEEEETTTEEECCS-SHHHHHHHHHHHH
T ss_pred HHHHhChHHHHHHHHHHHHHHHhCCCCCCeEEECCEEEecCC-CHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999777888 9999999998764
No 11
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=99.97 E-value=7.6e-30 Score=198.10 Aligned_cols=158 Identities=15% Similarity=0.154 Sum_probs=138.0
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHH
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTE 88 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (217)
.+..+++|++|+|+.||||+.+++.+.++.++|+. ++.+++.|+.+++
T Consensus 22 ~~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~~~~------------------------------ 69 (192)
T 3h93_A 22 SQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPALFGG------------------------------ 69 (192)
T ss_dssp SSTTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECCCST------------------------------
T ss_pred CCCCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehhhcc------------------------------
Confidence 34689999999999999999999999999998764 5666665654322
Q ss_pred HHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cccC
Q 027910 89 VFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FLDD 166 (217)
Q Consensus 89 ~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l~~ 166 (217)
++..+++++.+|+.+|. +++|+++||+++|.++.++++.+.|.++++++|||.+.+ ++++
T Consensus 70 ----------------~~~~aa~a~~aa~~~g~--~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~ 131 (192)
T 3h93_A 70 ----------------IWNVHGQMFLTLESMGV--EHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNS 131 (192)
T ss_dssp ----------------HHHHHHHHHHHHHHHTC--CHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTC
T ss_pred ----------------chHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHhhC
Confidence 13345677788888887 999999999999999999999999999999999999998 8899
Q ss_pred cccchhHHHHHHHHHhCCCCeecEEEECCeeeec--CCCCHHHHHHHHHHHh
Q 027910 167 PNSGLNEVHEELKKYSANISGVPHFVLNGKHELS--GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 167 ~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~--G~~~~~~l~~~i~~~~ 216 (217)
+++.+.+.++.+.+.++||+|||||+|||++.+. |+.+++.|.++|+.+.
T Consensus 132 ~~~~~~v~~~~~~a~~~gv~gtPt~~vng~~~~~~~G~~~~e~l~~~i~~l~ 183 (192)
T 3h93_A 132 FAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLI 183 (192)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSSSEEEETTTEEEEHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEECCEEEecccccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999997766 9999999999998764
No 12
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=99.96 E-value=6.6e-29 Score=193.04 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=137.6
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHH
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIAR 85 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (217)
..|++..+++|++|+|+.||||+.+++.|.++.++++. ++.+++.|+.+++
T Consensus 16 ~~g~~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~~~~--------------------------- 66 (195)
T 2znm_A 16 IPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVVWQP--------------------------- 66 (195)
T ss_dssp CCCSSSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECCCSG---------------------------
T ss_pred CCCCCCCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccccCc---------------------------
Confidence 45667889999999999999999999999999988753 4444444443211
Q ss_pred HHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHc-CCCcccc--
Q 027910 86 MTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKV-GVEGAAE-- 162 (217)
Q Consensus 86 ~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~-Gld~~~~-- 162 (217)
+|..+++++.+|+.+|. +++++++||+++|.++.++.+.+.|.+++++. |+|.+.+
T Consensus 67 -------------------~s~~aa~a~~aa~~~~~--~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~ 125 (195)
T 2znm_A 67 -------------------EMLGLARMAAAVNLSGL--KYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMR 125 (195)
T ss_dssp -------------------GGHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHCSSCTTSHHHHHHHHHTCSSSCHHHHHH
T ss_pred -------------------ccHHHHHHHHHHHHcCc--HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHcCCCCHHHHHH
Confidence 24456678888888887 99999999999999999999999999999999 9999988
Q ss_pred cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 163 FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 163 ~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+++++++...+.++.+.+.++||+|||||+|||++.+.|..+++.|.++|+++.
T Consensus 126 ~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~~~~~~l~~~i~~~l 179 (195)
T 2znm_A 126 AYDSPEAAAAALKMQKLTEQYRIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELV 179 (195)
T ss_dssp HHTSHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECCCSHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHcCCCCCCeEEECCEEEEcCCCCHHHHHHHHHHHH
Confidence 889999999999999999999999999999999977899888999999888653
No 13
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=99.96 E-value=5.4e-29 Score=192.04 Aligned_cols=156 Identities=14% Similarity=0.139 Sum_probs=133.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVF 90 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 90 (217)
..+++|++|+||.||||..+++.+.++++++ ...+|+++||+|++.. .
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~-~~g~v~~v~r~~p~~~-h------------------------------ 60 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA-GEDNVTVRIRLQSQPW-H------------------------------ 60 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHH-CTTTEEEEEEECCCTT-S------------------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHh-CCCCEEEEEEEcCCCC-C------------------------------
Confidence 6899999999999999999999999988876 2347999999998621 1
Q ss_pred HhcCCccccCCCCCCcHHHHHHHHHHhhcCC--chHHHHHHHHHHHH--h--h-----cCCCCCCHHHHHHHHHHcCCCc
Q 027910 91 RGLGLEYNMSGLTGNTLDSHRLLYLAGQQGL--DKQHNLAEELFLGY--F--T-----QGKYIGDKEFLVECARKVGVEG 159 (217)
Q Consensus 91 ~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~--~~~~~~~~al~~a~--~--~-----~g~~i~~~~~L~~ia~~~Gld~ 159 (217)
++|..+++++.+|..+++ +++++|+++||+.. | . ..+++++.++|.++++.+|||.
T Consensus 61 -------------~~s~~aaraa~aa~~~~~~~~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~ 127 (182)
T 3gn3_A 61 -------------MFSGVIVRCILAAATLEGGKESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDIIARIERYSGLAL 127 (182)
T ss_dssp -------------TTHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCC
T ss_pred -------------ccHHHHHHHHHHHHHhccChHHHHHHHHHHHhcCcccccccccccccCCCCHHHHHHHHHHHhCCCH
Confidence 235567788888877744 67999999999985 4 2 3478888999999999999999
Q ss_pred ccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeee--ecCCCCHHHHHHHH
Q 027910 160 AAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHE--LSGGQPPEVYLRAF 212 (217)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~--~~G~~~~~~l~~~i 212 (217)
+++ ++++++.+.++.+.+.++++||+|||||+|||++. ++|.+++++|.++|
T Consensus 128 ~~~-l~~~~~~~~v~~~~~~a~~~GV~gtPtf~ing~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 128 AEA-FANPELEHAVKWHTKYARQNGIHVSPTFMINGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHH-HHCGGGHHHHHHHHHHHHHHTCCSSSEEEETTEECTTCCTTSCHHHHHHHH
T ss_pred HHH-hcChHHHHHHHHHHHHHHHCCCCccCEEEECCEEccCCCCCCCHHHHHHHh
Confidence 987 78899999999999999999999999999999964 68999999999887
No 14
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=99.96 E-value=2.2e-28 Score=190.35 Aligned_cols=156 Identities=17% Similarity=0.156 Sum_probs=132.8
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHH
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEV 89 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (217)
...+++|++|+|+.||+|+.+++.+.++.++|++ ++ +|+.+++...
T Consensus 22 ~~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v--~~~~~p~~~~------------------------------ 67 (193)
T 3hz8_A 22 QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DM--YLRTEHVVWQ------------------------------ 67 (193)
T ss_dssp STTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TE--EEEEEECCCS------------------------------
T ss_pred CCCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--Ce--EEEEecCCCC------------------------------
Confidence 4479999999999999999999999999887764 34 4555543210
Q ss_pred HHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHH--HHHHHHHHHhhcCCCCCCHHHHHHHHHHc-CCCcccc--cc
Q 027910 90 FRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHN--LAEELFLGYFTQGKYIGDKEFLVECARKV-GVEGAAE--FL 164 (217)
Q Consensus 90 a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~--~~~al~~a~~~~g~~i~~~~~L~~ia~~~-Gld~~~~--~l 164 (217)
.++..+.+++.+|+.+|. .++ ++++||+++|.++.++.+.+.|.+++.++ |||.++| ++
T Consensus 68 --------------~~~~~aa~a~~aa~~~g~--~~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~ 131 (193)
T 3hz8_A 68 --------------KEMLTLARLAAAVDMAAA--DSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAY 131 (193)
T ss_dssp --------------GGGHHHHHHHHHHHHHTG--GGHHHHHHHHHHHHHTSCCCTTSHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred --------------cccHHHHHHHHHHHHcCc--hhHHhHHHHHHHHHHHhCcCCCCHHHHHHHHHHccCCCHHHHHHHH
Confidence 113446678888888887 677 99999999999999999999999999999 9999998 88
Q ss_pred cCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 165 DDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 165 ~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+++++.+.++++.+.+.++||+|||||+|||++.+.|. +++.|.++|+.+.
T Consensus 132 ~s~~~~~~v~~~~~~a~~~gv~gtPt~vvng~~~~~~~-~~e~l~~~i~~ll 182 (193)
T 3hz8_A 132 ESPESQARADKMQELTETFQIDGVPTVIVGGKYKVEFA-DWESGMNTIDLLA 182 (193)
T ss_dssp HSHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECCS-SHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCCcCCEEEECCEEEecCC-CHHHHHHHHHHHH
Confidence 99999999999999999999999999999999776676 9999999988754
No 15
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=99.96 E-value=2.6e-28 Score=187.45 Aligned_cols=163 Identities=10% Similarity=0.048 Sum_probs=135.9
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHH
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIAR 85 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (217)
..+|...+++|++|+||.||||+.+++.+.+++++|+. ++.+.++|+++...
T Consensus 15 l~~p~~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~-------------------------- 66 (184)
T 4dvc_A 15 LKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE--GAKFQKNHVSFMGG-------------------------- 66 (184)
T ss_dssp CSSCCCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TCEEEEEECSSSSG--------------------------
T ss_pred CCCCCCCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC--ceEEEEEecCCCCC--------------------------
Confidence 34455567899999999999999999999999998875 46677776654321
Q ss_pred HHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--c
Q 027910 86 MTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--F 163 (217)
Q Consensus 86 ~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~ 163 (217)
+.+..+.++..++..+|. .+.++..+|.+++..+.+..+.+.|.+++...|+|.+.| +
T Consensus 67 ------------------~~~~~~a~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~ 126 (184)
T 4dvc_A 67 ------------------NMGQAMSKAYATMIALEV--EDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAA 126 (184)
T ss_dssp ------------------GGHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHTSCCCCSSHHHHHHHHHTTTCCHHHHHHH
T ss_pred ------------------chHHHHHHHHHHHHHcCc--HHHHHHHHHHHHHHHhhccchHHHHHHHHHHhCCCHHHHHHH
Confidence 001123345555566677 899999999999999999999999999999999999999 8
Q ss_pred ccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeec--CCCCHHHHHHHHHHHh
Q 027910 164 LDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELS--GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 164 l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~--G~~~~~~l~~~i~~~~ 216 (217)
++++++.+.+.++.+.+.++||+|||||+|||+|.+. |..+++.|.++|+.+.
T Consensus 127 ~~s~~~~~~v~~~~~~a~~~gv~gTPtfiINGky~v~~~~~~s~e~~~~~i~~Ll 181 (184)
T 4dvc_A 127 YNGFAVDSMVHRFDKQFQDSGLTGVPAVVVNNRYLVQGQSAKSLDEYFDLVNYLL 181 (184)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSSHHHHHHHHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHcCCCcCCEEEECCEEeeCCcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998874 5789999999998764
No 16
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=99.95 E-value=6.7e-28 Score=187.38 Aligned_cols=156 Identities=13% Similarity=0.120 Sum_probs=130.9
Q ss_pred CCcceEEEEEecccCchhhhhHHHH---HHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHH
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNL---DKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARM 86 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l---~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (217)
-..+++|++|+||.||+|+.+++.+ .++.++|++ +++++++|+++..
T Consensus 19 ~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~--~v~~~~~~~~~~~---------------------------- 68 (191)
T 3l9s_A 19 VAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE--GTKMTKYHVEFLG---------------------------- 68 (191)
T ss_dssp CCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT--TCCEEEEECSSSS----------------------------
T ss_pred CCCCCeEEEEECCCChhHHHhChhccchHHHHHhCCC--CcEEEEEeccccc----------------------------
Confidence 3347899999999999999999986 688888875 5888999887631
Q ss_pred HHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cc
Q 027910 87 TEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FL 164 (217)
Q Consensus 87 ~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l 164 (217)
+.+..+.+++.+|+.+|. .++|+++||+++|.++. +.+.+.|.++++++|||.++| ++
T Consensus 69 -----------------~~s~~aa~a~~aA~~~g~--~~~~~~~lf~a~~~~~~-~~~~~~L~~~a~~~Gld~~~~~~~~ 128 (191)
T 3l9s_A 69 -----------------PLGKELTQAWAVAMALGV--EDKVTVPLFEAVQKTQT-VQSAADIRKVFVDAGVKGEDYDAAW 128 (191)
T ss_dssp -----------------TTHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHTSCC-CSSHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -----------------ccCHHHHHHHHHHHHcCc--HHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 013335567777888888 88999999999999887 899999999999999999999 88
Q ss_pred cCcccchhHHHHHHHHHhCCCCeecEEEECCeeeec--CCCCH------HHHHHHHHHH
Q 027910 165 DDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELS--GGQPP------EVYLRAFQVA 215 (217)
Q Consensus 165 ~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~--G~~~~------~~l~~~i~~~ 215 (217)
+++++.+.+.++.+.+.++||+|||||+|||++.+. |..+. +.+.++|+.+
T Consensus 129 ~s~~~~~~v~~~~~~a~~~gv~gtPtfvvnG~~~v~~~~~~~~~~~~~~~~~~~~i~~L 187 (191)
T 3l9s_A 129 NSFVVKSLVAQQEKAAADLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQQYADTVKYL 187 (191)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHhCCcccCEEEECCEEEECccccCCccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999998774 56654 4777777654
No 17
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=99.95 E-value=1.7e-28 Score=189.86 Aligned_cols=154 Identities=17% Similarity=0.148 Sum_probs=129.4
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFR 91 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~ 91 (217)
.+++|+.|+||.||+|+.+++.+.++.++| ++.++..|+.+++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~----~v~~~~~p~~~~~--------------------------------- 64 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA----GTDIGKMHITFNQ--------------------------------- 64 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH----TSCCEEEECCSSS---------------------------------
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh----CCeEEEEeccCCc---------------------------------
Confidence 478999999999999999999999999876 3666666665432
Q ss_pred hcCCccccCCCCCCcHHHHHHHHHHhhc-CCchHHHHHHHHHHHHhhcCC--CCCCHHHHHHHHHHcCC-Ccccc--ccc
Q 027910 92 GLGLEYNMSGLTGNTLDSHRLLYLAGQQ-GLDKQHNLAEELFLGYFTQGK--YIGDKEFLVECARKVGV-EGAAE--FLD 165 (217)
Q Consensus 92 ~~g~~~~~~~~~~~s~~a~~~~~~a~~~-g~~~~~~~~~al~~a~~~~g~--~i~~~~~L~~ia~~~Gl-d~~~~--~l~ 165 (217)
++..+.+++.+|+.+ |....++++++||+++|.++. ++.+.+.|.+++.++|| |+++| .+.
T Consensus 65 -------------~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~ 131 (185)
T 3feu_A 65 -------------SAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQR 131 (185)
T ss_dssp -------------HHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHH
T ss_pred -------------cchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 122345677777654 543368999999999999887 68899999999999999 99998 666
Q ss_pred CcccchhHHHHHHHHHhCCCCeecEEEECCeeee--cCCCCHHHHHHHHHHHh
Q 027910 166 DPNSGLNEVHEELKKYSANISGVPHFVLNGKHEL--SGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 166 ~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~--~G~~~~~~l~~~i~~~~ 216 (217)
+ ++.+.++++.+.++++||+|||||+|||+|.+ +|+++++.|.++|+.+.
T Consensus 132 ~-~~~~~v~~~~~~a~~~gv~GtPtfvvng~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 132 D-TLIKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp H-HHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSSHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHcCCCccCEEEECCEEEEecCCCCCHHHHHHHHHHHH
Confidence 6 77889999999999999999999999999887 89999999999999875
No 18
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.95 E-value=1.7e-27 Score=181.99 Aligned_cols=158 Identities=14% Similarity=0.147 Sum_probs=138.1
Q ss_pred cccCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHH
Q 027910 3 QSVSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGI 82 (217)
Q Consensus 3 ~~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 82 (217)
.++..|+...+++|++|+|+.||||+.+++.|.+++++++ +++++|+++++..
T Consensus 13 ~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~~p~~~------------------------ 65 (175)
T 3gyk_A 13 NAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP---NVRLVYREWPILG------------------------ 65 (175)
T ss_dssp TSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEECCCSC------------------------
T ss_pred CCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC---CEEEEEEeCCCCC------------------------
Confidence 3567788999999999999999999999999999998765 4899999987632
Q ss_pred HHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 83 IARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 83 ~~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
++|..+++++.++..+|. +++|++++|. ++.++ +.+.|.++++++|+|.+.+
T Consensus 66 ---------------------~~s~~aa~~~~~a~~~~~--~~~~~~~lf~----~~~~~-~~~~l~~~a~~~Gld~~~~ 117 (175)
T 3gyk_A 66 ---------------------EGSDFAARAALAARQQGK--YEAFHWALMG----MSGKA-NETGVLRIAREVGLDTEQL 117 (175)
T ss_dssp ---------------------HHHHHHHHHHHHGGGGTC--HHHHHHHHHT----CSSCC-SHHHHHHHHHHTTCCHHHH
T ss_pred ---------------------CChHHHHHHHHHHHHHhH--HHHHHHHHHh----cCCCC-CHHHHHHHHHHcCCCHHHH
Confidence 125567788888888877 9999988876 45566 7899999999999999999
Q ss_pred --cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 163 --FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 163 --~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+++++++.+.+.++.+.+.++||+|||||+|||+ .+.|..+++.|.++|+++.
T Consensus 118 ~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i~g~-~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 118 QRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVVEDA-LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEETTE-EECSCCCHHHHHHHHHHHH
T ss_pred HHHHhChHHHHHHHHHHHHHHHcCCccCCEEEECCE-EeeCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998 7899999999999998764
No 19
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=99.95 E-value=1.4e-28 Score=195.81 Aligned_cols=164 Identities=16% Similarity=0.113 Sum_probs=133.8
Q ss_pred ccCcccCCcceEEEEEecccCchhhhhHHHH-HHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHH
Q 027910 4 SVSSSAGKKLIRIDVSSDTVCPWCFVGKRNL-DKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGI 82 (217)
Q Consensus 4 ~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l-~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 82 (217)
++..|++..+++|++|+||.||||+.+++.+ .++.++|.+..+|+++|+++++++
T Consensus 31 ~~~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~------------------------ 86 (226)
T 3f4s_A 31 DKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDY------------------------ 86 (226)
T ss_dssp CCEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSH------------------------
T ss_pred CCccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCCh------------------------
Confidence 5667889999999999999999999999864 667778865568999999998731
Q ss_pred HHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCC-CCCCHHHHHHHHHHcCCCccc
Q 027910 83 IARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK-YIGDKEFLVECARKVGVEGAA 161 (217)
Q Consensus 83 ~~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~-~i~~~~~L~~ia~~~Gld~~~ 161 (217)
.|..+++++.++..+| ++++|+++||++....+. ++.+.+.|.++++++|||.++
T Consensus 87 ----------------------~s~~Aa~aa~aa~~~~--~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~ 142 (226)
T 3f4s_A 87 ----------------------RGLKAAMLSHCYEKQE--DYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDA 142 (226)
T ss_dssp ----------------------HHHHHHHHGGGCCSHH--HHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHH
T ss_pred ----------------------hHHHHHHHHHHhhChH--HHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHH
Confidence 0233445555554444 499999999998644322 366789999999999999999
Q ss_pred c--cccCcccchhHHHHHHHHHh-CCCCeecEEEE---CCeeeecCCCC--------HHHHHHHHHHHh
Q 027910 162 E--FLDDPNSGLNEVHEELKKYS-ANISGVPHFVL---NGKHELSGGQP--------PEVYLRAFQVAA 216 (217)
Q Consensus 162 ~--~l~~~~~~~~~~~~~~~a~~-~gv~g~Pt~vv---~g~~~~~G~~~--------~~~l~~~i~~~~ 216 (217)
| +++++++.+.+.++.+.+.+ +||+|||||+| ||+ .+.|..+ ++.|.++|++++
T Consensus 143 ~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~-~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 143 FNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDK-SYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTT-CCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCE-EeeCCCCcccccccCHHHHHHHHHHHH
Confidence 8 88999999999999999999 99999999999 998 4566555 999999998764
No 20
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=99.95 E-value=3.5e-28 Score=190.88 Aligned_cols=164 Identities=12% Similarity=0.079 Sum_probs=130.4
Q ss_pred ccCcccCCcceEEEEEecccCchhhhhHHHHHHHHH-hcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHH
Q 027910 4 SVSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIA-SSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGI 82 (217)
Q Consensus 4 ~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~-~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 82 (217)
++..|++..+++|++|+||.||||..+++.+.+.++ +|.+..+|+++|++|++++.
T Consensus 7 ~~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~pl~~~----------------------- 63 (205)
T 3gmf_A 7 HHLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFVRDPI----------------------- 63 (205)
T ss_dssp EEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECCCSHH-----------------------
T ss_pred CceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeCCCCcc-----------------------
Confidence 456788999999999999999999999998877776 88666789999999975320
Q ss_pred HHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHh--h-cCCCCC----------------
Q 027910 83 IARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYF--T-QGKYIG---------------- 143 (217)
Q Consensus 83 ~~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~--~-~g~~i~---------------- 143 (217)
|..+..++.+ .+++++++|+++||...- . .+.+++
T Consensus 64 -----------------------s~~aa~aa~~---~~~~~f~~~~~~Lf~~q~~~~~~~~~~~~~~~~~w~~~~~~~~l 117 (205)
T 3gmf_A 64 -----------------------DMTVALITNC---VPPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRT 117 (205)
T ss_dssp -----------------------HHHHHHHHHH---SCHHHHHHHHHHHHHTHHHHCHHHHHCCHHHHHTTSSSCHHHHH
T ss_pred -----------------------hHHHHHHHHh---cCHhHHHHHHHHHHHcCHHHHhcccccchhhhhccccchhHHHH
Confidence 1122233322 345569999999998652 1 111222
Q ss_pred ----CHHHHHHHHHHcCCCcccc--cccCcccchhHHHHHHHH-HhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 144 ----DKEFLVECARKVGVEGAAE--FLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 144 ----~~~~L~~ia~~~Gld~~~~--~l~~~~~~~~~~~~~~~a-~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.|.+++.++|||.++| +++++++.+.+.++.+.+ .++||+|||||+|||+ .+.|..+++.|.++|+++.
T Consensus 118 ~~ia~~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvvng~-~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 118 RAIASDFRFYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGI-LLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHTTHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSSEEEETTE-ECTTCCSHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHcCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHcCCccCCEEEECCE-EEeCCCCHHHHHHHHHHHh
Confidence 1235677788899999999 899999999999999999 9999999999999999 6899999999999999886
Q ss_pred C
Q 027910 217 N 217 (217)
Q Consensus 217 ~ 217 (217)
|
T Consensus 197 ~ 197 (205)
T 3gmf_A 197 N 197 (205)
T ss_dssp T
T ss_pred h
Confidence 5
No 21
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.95 E-value=3.8e-27 Score=183.22 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=133.6
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHH
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEV 89 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (217)
+..+++|++|+|+.||+|+.+.+.+.++.++|++ ++.+.+.|+.+++
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~~~~------------------------------- 69 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIAFNA------------------------------- 69 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECCSSG-------------------------------
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecccCc-------------------------------
Confidence 5578999999999999999999999999998874 5666666554321
Q ss_pred HHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc--cccCc
Q 027910 90 FRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE--FLDDP 167 (217)
Q Consensus 90 a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~--~l~~~ 167 (217)
++..+.+++.+++.+| +++++++||+++|.++.++.+.+.|.++++++|+|.+++ +++++
T Consensus 70 ---------------~s~~aa~a~~aa~~~g---~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~ 131 (195)
T 3hd5_A 70 ---------------GMKPLQQLYYTLQALE---RPDLHPKVFTAIHTERKRLFDKKAMGEWAASQGVDRAKFDSVFDSF 131 (195)
T ss_dssp ---------------GGHHHHHHHHHHHHTT---CTTHHHHHHHHHHTSCCCCCSHHHHHHHHHHTTCCHHHHHHHHTCH
T ss_pred ---------------chHHHHHHHHHHHhcC---HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCHHHHHHHHcCH
Confidence 2344567777777777 789999999999999999999999999999999999998 88999
Q ss_pred ccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCH---HHHHHHHHHHh
Q 027910 168 NSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP---EVYLRAFQVAA 216 (217)
Q Consensus 168 ~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~---~~l~~~i~~~~ 216 (217)
++++.+.++.+.+.++||+|||||+|||++.+.|.++. +.|.++|+.+.
T Consensus 132 ~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~~~~~~~e~~~~~i~~L~ 183 (195)
T 3hd5_A 132 SVQTQVQRASQLAEAAHIDGTPAFAVGGRYMTSPVLAGNDYAGALKVVDQLI 183 (195)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECTTTTTGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCceEEECCEEEeCccccCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999888887654 77888887653
No 22
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=99.95 E-value=1.6e-27 Score=184.87 Aligned_cols=169 Identities=17% Similarity=0.212 Sum_probs=130.3
Q ss_pred CcceEEEEEecccCchhhhhHHHH-HHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNL-DKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEV 89 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l-~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (217)
..++++..|+|+.|||||.+++.+ .++.++|+. .++++ ++.+... +.. .. .+..++..+...
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~--~v~~~--~~~l~~~----~~~-~~--------~~~~~~~~~~~~ 78 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD--IVAFT--PFHLETK----GEY-GK--------QASEVFAVLINK 78 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT--TCEEE--EEECTTS----STT-HH--------HHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC--ceEEE--EEecCcc----ccc-cH--------HHHHHHHHHHHh
Confidence 566677778999999999999999 888887753 34444 4444332 110 11 122233444455
Q ss_pred HHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHH----HHHcCCCcccc--c
Q 027910 90 FRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVEC----ARKVGVEGAAE--F 163 (217)
Q Consensus 90 a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~i----a~~~Gld~~~~--~ 163 (217)
+.+.|++ .++ ++ ..+++|+++||+++|.+++++++.++|.++ ++++|||.+++ +
T Consensus 79 ~~~~~~~-~~~--------~~-----------~~~~~~~~~l~~a~~~~~~~~~~~~~l~~~~~~~a~~~Gld~~~~~~~ 138 (195)
T 3c7m_A 79 DKAAGIS-LFD--------AN-----------SQFKKAKFAYYAAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAA 138 (195)
T ss_dssp HHHTTCC-TTS--------TT-----------CHHHHHHHHHHHHHHTSCCCTTTTTCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred hhhcCCC-chh--------HH-----------HHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhHHHHcCCCHHHHHHH
Confidence 5666665 322 11 237899999999999999999999999999 99999999988 8
Q ss_pred ccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeec--CCCCHHHHHHHHHHHh
Q 027910 164 LDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELS--GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 164 l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~--G~~~~~~l~~~i~~~~ 216 (217)
++++++++.+.++.+.+.++||+|||||+|||++.+. |..+++.|.++|+++.
T Consensus 139 ~~~~~~~~~v~~~~~~a~~~gv~gtPt~~ing~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 139 LKEPAVQETLEKWKASYDVAKIQGVPAYVVNGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp HTSHHHHHHHHHGGGHHHHHHHHCSSEEEETTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHHHHcCCCccCEEEECCEEEeccCCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999999997665 9999999999999875
No 23
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=99.95 E-value=6e-27 Score=181.65 Aligned_cols=155 Identities=10% Similarity=0.036 Sum_probs=130.5
Q ss_pred cceEEEEEecccCchhhhhHHHH---HHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNL---DKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTE 88 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l---~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (217)
.+++|..|+|+.||+|+.+++.+ .++.++|++ +++++++++++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~------------------------------ 61 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSLLG------------------------------ 61 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSSSS------------------------------
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechhcc------------------------------
Confidence 46789999999999999999986 566666764 6999999998631
Q ss_pred HHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHc-CCCcccc--ccc
Q 027910 89 VFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKV-GVEGAAE--FLD 165 (217)
Q Consensus 89 ~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~-Gld~~~~--~l~ 165 (217)
+.|..+++++.+|+.+|. .++|++++|+++|.++. +.+.+.|.+++.++ |||.++| +++
T Consensus 62 ---------------~~s~~aa~a~~aA~~~g~--~~~~~~~lf~a~~~~~~-~~~~~~l~~~a~~~~Gld~~~~~~~~~ 123 (189)
T 3l9v_A 62 ---------------PLGHELTRAWALAMVMKE--TDVIEKAFFTAGMVEKR-LHSPDDVRRVFMSATGISRGEYDRSIK 123 (189)
T ss_dssp ---------------TTHHHHHHHHHHHHHHTC--HHHHHHHHHHHHTTTCC-CCSHHHHHHHHHHHHCCCHHHHHHHTT
T ss_pred ---------------cccHHHHHHHHHHHHcCc--HHHHHHHHHHHHhhhcc-CCCHHHHHHHHHHccCCCHHHHHHHHh
Confidence 113445677777888888 89999999999999988 89999999999999 9999998 889
Q ss_pred CcccchhHHHHHHHHHhCCCCeecEEEECCeeeecC--CCCH------HHHHHHHHHHh
Q 027910 166 DPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSG--GQPP------EVYLRAFQVAA 216 (217)
Q Consensus 166 ~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G--~~~~------~~l~~~i~~~~ 216 (217)
++++.+.++++.+.+.++||+|||||+|||+|.+.| ..+. +.+.++|+.+.
T Consensus 124 s~~~~~~v~~~~~~a~~~gv~GtPt~~vng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li 182 (189)
T 3l9v_A 124 SPAVNDMVALQERLFKEYGVRGTPSVYVRGRYHINNAAFGAFSVENFRSRYAAVVRKLL 182 (189)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCccCEEEECCEEEECccccccccccchHHHHHHHHHHHH
Confidence 999999999999999999999999999999988865 3443 78888887653
No 24
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=99.91 E-value=5e-24 Score=162.77 Aligned_cols=155 Identities=11% Similarity=0.088 Sum_probs=114.9
Q ss_pred ccCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHH
Q 027910 4 SVSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGII 83 (217)
Q Consensus 4 ~~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (217)
++..|+...+++|++|+|+.||||+.+++.+.+++++|.+..+++++|+++++.+.. ...
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~------~~~-------------- 78 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKES------LQR-------------- 78 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTT------THH--------------
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCccc------HHH--------------
Confidence 345677889999999999999999999999999998882223799999999875310 000
Q ss_pred HHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH-HcCCCcccc
Q 027910 84 ARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECAR-KVGVEGAAE 162 (217)
Q Consensus 84 ~~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~-~~Gld~~~~ 162 (217)
+..+..++...+++++++|+++||++....+ ++ +.+.|.+++. ++|+|.+
T Consensus 79 -------------------------a~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~-~~-~~~~l~~~a~~~~Gld~~-- 129 (175)
T 1z6m_A 79 -------------------------GNVMHHYIDYSAPEQALSALHKMFATQDEWG-NL-TLEEVATYAEKNLGLKEQ-- 129 (175)
T ss_dssp -------------------------HHHHHTTCCTTCHHHHHHHHHHHHHTHHHHT-TS-CHHHHHHHHHHTSCCCCC--
T ss_pred -------------------------HHHHHHHHHhcChHHHHHHHHHHHHcChhhc-cC-CHHHHHHHHHHhcCCCcc--
Confidence 0000001111234458999999999864433 34 6778888864 6899865
Q ss_pred cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 163 FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 163 ~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
+..+.+.++.+.++++||+|||||+|||+ .+.|..+++.|.++|+
T Consensus 130 -----~~~~~~~~~~~~a~~~gv~gtPt~vvng~-~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 130 -----KDATLVSAVIAEANAAHIQFVPTIIIGEY-IFDESVTEEELRGYIE 174 (175)
T ss_dssp -----CCHHHHHHHHHHHHHHTCCSSCEEEETTE-EECTTCCHHHHHHHHT
T ss_pred -----cCHHHHHHHHHHHHHcCCCCcCeEEECCE-EccCCCCHHHHHHHhc
Confidence 23456777888899999999999999999 6799999999999885
No 25
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=99.72 E-value=1.7e-17 Score=123.23 Aligned_cols=129 Identities=15% Similarity=0.213 Sum_probs=90.8
Q ss_pred cccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHH
Q 027910 7 SSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARM 86 (217)
Q Consensus 7 ~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (217)
-+....+++|++|+||.||||..+++.+. ++. +++|+|+.|++....
T Consensus 9 ~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~----~l~---~v~v~~~~~P~~~~~-------------------------- 55 (147)
T 3gv1_A 9 EVRGNGKLKVAVFSDPDCPFCKRLEHEFE----KMT---DVTVYSFMMPIAGLH-------------------------- 55 (147)
T ss_dssp EEETTCCEEEEEEECTTCHHHHHHHHHHT----TCC---SEEEEEEECCCTTTC--------------------------
T ss_pred eecCCCCEEEEEEECCCChhHHHHHHHHh----hcC---ceEEEEEEccccccC--------------------------
Confidence 35677899999999999999999998775 342 699999988874321
Q ss_pred HHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccccccC
Q 027910 87 TEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAEFLDD 166 (217)
Q Consensus 87 ~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~~l~~ 166 (217)
++|..+++++.+|.+ + ...+.+ ++. .|. + +. .+
T Consensus 56 -----------------~~s~~~a~a~~ca~d--~--~~a~~~-~~~----~g~-~---------------~~-----~~ 88 (147)
T 3gv1_A 56 -----------------PDAARKAQILWCQPD--R--AKAWTD-WMR----KGK-F---------------PV-----GG 88 (147)
T ss_dssp -----------------TTHHHHHHHHHTSSS--H--HHHHHH-HHH----HCC-C---------------CT-----TC
T ss_pred -----------------hhHHHHHHHHHcCCC--H--HHHHHH-HHh----CCC-C---------------CC-----cc
Confidence 123334455544432 2 222222 221 221 1 10 13
Q ss_pred cccchhHHHHHHHHHhCCCCeecEEEE-CCeeeecCCCCHHHHHHHHHHHh
Q 027910 167 PNSGLNEVHEELKKYSANISGVPHFVL-NGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 167 ~~~~~~~~~~~~~a~~~gv~g~Pt~vv-~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
++....+.++.+.+.++||.|||||+| ||+ .+.|+.+++.|+++|+++.
T Consensus 89 ~~~~~~v~~~~~la~~~gI~gtPt~vi~nG~-~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 89 SICDNPVAETTSLGEQFGFNGTPTLVFPNGR-TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp CCCSCSHHHHHHHHHHTTCCSSCEEECTTSC-EEESCCCTTHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhCCCccCEEEEECCE-EeeCCCCHHHHHHHHHHHH
Confidence 345668999999999999999999999 787 7899999999999998764
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=99.67 E-value=1.8e-16 Score=127.05 Aligned_cols=138 Identities=9% Similarity=-0.073 Sum_probs=96.1
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHH
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIAR 85 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (217)
..|+...+++|++|+|+.||||..+++.+.++++. .+|+|+|+++++-.
T Consensus 91 ~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g~v~v~~~~~p~~~--------------------------- 139 (241)
T 1v58_A 91 LDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS----GKVQLRTLLVGVIK--------------------------- 139 (241)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT----TSEEEEEEECCCSS---------------------------
T ss_pred eECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC----CcEEEEEEECCcCC---------------------------
Confidence 34677889999999999999999999999988773 46999999987521
Q ss_pred HHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCccccccc
Q 027910 86 MTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAEFLD 165 (217)
Q Consensus 86 ~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~~l~ 165 (217)
+.|..+++++.++.+ +.++++++..+|.. + |++.. ...
T Consensus 140 ------------------~~s~~~a~a~~~a~d--~~~~~~~~~~~~~~----~----------------~l~~~--~~~ 177 (241)
T 1v58_A 140 ------------------PESPATAAAILASKD--PAKTWQQYEASGGK----L----------------KLNVP--ANV 177 (241)
T ss_dssp ------------------TTHHHHHHHHHHSSS--HHHHHHHHHHTTTC----C----------------CCCCC--SSC
T ss_pred ------------------CcHHHHHHHHHHccC--HHHHHHHHHHHhcc----C----------------CCCcc--ccC
Confidence 012223344444433 33366666665531 1 23321 123
Q ss_pred CcccchhHHHHHHHHHhCCCCeecEEEEC---Cee-eecCCCCHHHHHHHHHHHh
Q 027910 166 DPNSGLNEVHEELKKYSANISGVPHFVLN---GKH-ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 166 ~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~---g~~-~~~G~~~~~~l~~~i~~~~ 216 (217)
++++...+.++.+.++++||.|||||+++ |++ .+.|+.+.+.|.++|++.+
T Consensus 178 ~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 178 STEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 44556678889999999999999999995 553 5799999999999987643
No 27
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=99.52 E-value=1.8e-13 Score=107.44 Aligned_cols=128 Identities=18% Similarity=0.224 Sum_probs=87.0
Q ss_pred ccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHH
Q 027910 8 SAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMT 87 (217)
Q Consensus 8 ~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 87 (217)
+++..+++|.+|+|+.||||..+++.+.++.+ .+++++|+.+++....+ .
T Consensus 82 g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~-----~~v~v~~~~~p~~~~~~-------~------------------ 131 (211)
T 1t3b_A 82 PAKNEKHVVTVFMDITCHYCHLLHQQLKEYND-----LGITVRYLAFPRAGMNN-------Q------------------ 131 (211)
T ss_dssp CCTTCSEEEEEEECTTCHHHHHHHTTHHHHHH-----TTEEEEEEECCSSTTCS-------H------------------
T ss_pred cCCCCCEEEEEEECCCCHhHHHHHHHHHHHHh-----CCcEEEEEECCccCCCc-------h------------------
Confidence 45578999999999999999999999988654 25899998887643211 0
Q ss_pred HHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccccccCc
Q 027910 88 EVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAEFLDDP 167 (217)
Q Consensus 88 ~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~~l~~~ 167 (217)
+...+.++.+ ..++ ...+++. + .+.++ + + .
T Consensus 132 ------------------s~~~a~~~~~--a~d~--~~a~~~~-----~-~~~~~---------------~---~----~ 161 (211)
T 1t3b_A 132 ------------------TAKQMEAIWT--AKDP--VFALNEA-----E-KGNLP---------------K---E----V 161 (211)
T ss_dssp ------------------HHHHHHHHHH--SSSH--HHHHHHH-----H-TTCCC---------------S---S----C
T ss_pred ------------------HHHHHHHHHh--CcCH--HHHHHHH-----H-cCCCC---------------C---h----H
Confidence 0001111111 2233 3333332 2 22221 1 0 1
Q ss_pred ccchhHHHHHHHHHhCCCCeecEEEE-CCeeeecCCCCHHHHHHHHHHHh
Q 027910 168 NSGLNEVHEELKKYSANISGVPHFVL-NGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 168 ~~~~~~~~~~~~a~~~gv~g~Pt~vv-~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
.....+.++.+.+.++||.|||||++ ||+ .+.|+.+.+.|.+.|+++.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi~nG~-~~~G~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVTSTGE-LIGGYLKPADLLRALEETA 210 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEECTTSC-CCCSCCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEEeCCE-EecCCCCHHHHHHHHHhcc
Confidence 23457888899999999999999999 887 7899999999999998753
No 28
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.41 E-value=1.8e-12 Score=102.01 Aligned_cols=129 Identities=18% Similarity=0.256 Sum_probs=86.2
Q ss_pred cccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHH
Q 027910 7 SSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARM 86 (217)
Q Consensus 7 ~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (217)
.|....+++|.+|+|+.||||...++.+.++.+ . +++++|+++++....+ .
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~-~v~v~~~~~p~~~~~~-------~----------------- 131 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNA----L-GITVRYLAFPRQGLDS-------D----------------- 131 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHH----T-TEEEEEEECCTTCSSS-------H-----------------
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHh----C-CcEEEEEECCccCCCc-------h-----------------
Confidence 356678999999999999999999999988765 2 6899998887532110 0
Q ss_pred HHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccccccC
Q 027910 87 TEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAEFLDD 166 (217)
Q Consensus 87 ~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~~l~~ 166 (217)
+...++++.++ .++ ...+++.++ ..+ ++.
T Consensus 132 -------------------s~~~a~a~~~a--~d~--~~~~~~~~~----~~~-----------------~~~------- 160 (216)
T 1eej_A 132 -------------------AEKEMKAIWCA--KDK--NKAFDDVMA----GKS-----------------VAP------- 160 (216)
T ss_dssp -------------------HHHHHHHHHTS--SSH--HHHHHHHHT----TCC-----------------CCC-------
T ss_pred -------------------HHHHHHHHHhc--cCH--HHHHHHHHh----CCC-----------------CCh-------
Confidence 11111222222 122 333433322 111 111
Q ss_pred cccchhHHHHHHHHHhCCCCeecEEEE-CCeeeecCCCCHHHHHHHHHHHh
Q 027910 167 PNSGLNEVHEELKKYSANISGVPHFVL-NGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 167 ~~~~~~~~~~~~~a~~~gv~g~Pt~vv-~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.....+.++.+.+.++||.|||||++ ||+ .+.|+.+.+.|.+.|+++.
T Consensus 161 ~~~~~~v~~~~~l~~~~gV~gtPt~v~~dG~-~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 161 ASCDVDIADHYALGVQLGVSGTPAVVLSNGT-LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCSCCHHHHHHHHHHHTCCSSSEEECTTSC-EEESCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCccCEEEEcCCe-EecCCCCHHHHHHHHHHhh
Confidence 123345778888899999999999999 665 7899999999999998754
No 29
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.11 E-value=1.5e-10 Score=89.71 Aligned_cols=61 Identities=18% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCCCCHHHHHHHHHHcCCCcccc--cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeec
Q 027910 140 KYIGDKEFLVECARKVGVEGAAE--FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELS 200 (217)
Q Consensus 140 ~~i~~~~~L~~ia~~~Gld~~~~--~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~ 200 (217)
++|++.++|.+++.++|||.+++ +++++++.+.+.++.+.+...||+|||+|+|||+|.+.
T Consensus 1 ~~i~d~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gi~gvP~fvingk~~~~ 63 (197)
T 1un2_A 1 QTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLN 63 (197)
T ss_dssp CCCSSHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEEcceEecC
Confidence 47899999999999999999999 88999999999999999999999999999999998775
No 30
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=99.04 E-value=6.9e-10 Score=89.46 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=33.3
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeeccc
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFL 56 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l 56 (217)
.+.+.+|++|+||.||||...++.+.+.++. ++|.|.+|++
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~------~~Vr~i~~Pi 185 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKLRDHLKE------NTVRMVVVGW 185 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTHHHHHHH------CEEEEEECCC
T ss_pred CCCCeEEEEEECcCChhHHHHHHHHHHHhhC------CcEEEEEeec
Confidence 5678999999999999999999999977762 5566665553
No 31
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.73 E-value=1.5e-08 Score=78.44 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=62.6
Q ss_pred CcceEEEEEecccCchhhhhHHHH---HHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHHHHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNL---DKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMT 87 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l---~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 87 (217)
..+++|..||||.||+|+...+.+ .++.++|++ ++.+...|+...+.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~~~---------------------------- 161 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFMGG---------------------------- 161 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSSSH----------------------------
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcCCc----------------------------
Confidence 356899999999999999999988 888887764 67888777754210
Q ss_pred HHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcC
Q 027910 88 EVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQG 139 (217)
Q Consensus 88 ~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g 139 (217)
+.+..+.++..+++.+|. .++++.+||.+++.++
T Consensus 162 ----------------~~~~~~a~a~~aa~~~g~--~~~~~~~lF~ai~~~~ 195 (197)
T 1un2_A 162 ----------------DLGKDLTQAWAVAMALGV--EDKVTVPLFEGVQKTL 195 (197)
T ss_dssp ----------------HHHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHTTC
T ss_pred ----------------cchHHHHHHHHHHHHcCC--HHHhhHHHHHHHHHHc
Confidence 013345677778888898 9999999999987654
No 32
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.42 E-value=5.1e-07 Score=59.15 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=29.9
Q ss_pred HhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHH
Q 027910 181 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 181 ~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~ 215 (217)
.+.|+.|+||+++||+..+.|..+.+.|.+.|+++
T Consensus 50 ~~~~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 50 MEYGIMAVPTIVINGDVEFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp TSTTTCCSSEEEETTEEECCSSSSSHHHHHHHHHH
T ss_pred HHCCCcccCEEEECCEEeeecCCCHHHHHHHHHHh
Confidence 45699999999999886578988899999999875
No 33
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.33 E-value=8.4e-07 Score=58.07 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=31.5
Q ss_pred HHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.|+.|+||+++||+..+.|..+.+.|.+.|+++.
T Consensus 48 ~~~~~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 48 AIEYGLMAVPAIAINGVVRFVGAPSREELFEAINDEM 84 (85)
T ss_dssp GGGTCSSCSSEEEETTTEEEECSSCCHHHHHHHHHHC
T ss_pred HHhCCceeeCEEEECCEEEEccCCCHHHHHHHHHHHh
Confidence 4678999999999998855789888999999998764
No 34
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.14 E-value=2.5e-05 Score=56.07 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=31.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+...||+|....+.+.++.++|++. +.+...
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v 67 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAV 67 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEE
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEE
Confidence 4467788888999999999999999999888753 555443
No 35
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.04 E-value=0.00014 Score=53.55 Aligned_cols=129 Identities=12% Similarity=0.069 Sum_probs=82.9
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecccCCCCCCCCCChHHHHHhhhCCcHHHHHH
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIA 84 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 84 (217)
++...-..++.|..|+..-||+|....+.|.++.++|+ ++.|... .... .+.
T Consensus 30 ~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i--~~d~---------~~~-------------- 81 (165)
T 3ha9_A 30 ISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAI--DFWT---------AEA-------------- 81 (165)
T ss_dssp ECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEE--ECCS---------HHH--------------
T ss_pred eeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEE--Eecc---------ccc--------------
Confidence 34444456788999999999999999999999998875 4555443 3221 000
Q ss_pred HHHHHHHhcCCccccCCCCCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCC-Cccccc
Q 027910 85 RMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGV-EGAAEF 163 (217)
Q Consensus 85 ~~~~~a~~~g~~~~~~~~~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gl-d~~~~~ 163 (217)
.+..|+. .+ ......+.+.+.+++++.|+ +.. .
T Consensus 82 -----~~~~~~~-----------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~--~ 115 (165)
T 3ha9_A 82 -----LKALGLN-----------------------KP----------------GYPPPDTPEMFRKFIANYGDPSWI--M 115 (165)
T ss_dssp -----HHHHTCC-----------------------ST----------------TSCCCCCHHHHHHHHHHHSCTTSE--E
T ss_pred -----ccccccc-----------------------cc----------------cCCCCCCHHHHHHHHHHcCCCCee--E
Confidence 0011110 00 11123467888888888888 322 2
Q ss_pred ccCcccchhHHHHHHHHHhCCCCeecEEEE---CCeeeecCCC-CHHHHHHHHHHHh
Q 027910 164 LDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHELSGGQ-PPEVYLRAFQVAA 216 (217)
Q Consensus 164 l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv---~g~~~~~G~~-~~~~l~~~i~~~~ 216 (217)
+.+ +...+...|+.++|+++| +|+....|.. +.+.|.+.|+++.
T Consensus 116 ~~d---------~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 116 VMD---------DGSLVEKFNVRSIDYIVIMDKSSNVLYAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEC---------CSHHHHHTTCCSSSEEEEEETTCCEEEEEESCCHHHHHHHHHHC-
T ss_pred EeC---------hHHHHHHhCCCCceEEEEEcCCCcEEEeCCCCCHHHHHHHHHHHh
Confidence 222 123456779999999987 5774446888 8999999998764
No 36
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.00 E-value=0.00031 Score=51.08 Aligned_cols=46 Identities=11% Similarity=0.108 Sum_probs=34.5
Q ss_pred cCcccCCcceEEEEEecccCchhhhh-HHHHHHHHHhcCCCCceeEEE
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVG-KRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~-~~~l~~~~~~~~~~~~v~v~~ 51 (217)
++...-..++.|..|+..-||.|... .+.|.++.++|++ .++.+..
T Consensus 21 ~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~-~~v~~v~ 67 (158)
T 3eyt_A 21 LTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE-DKVAVLG 67 (158)
T ss_dssp CCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT-TTEEEEE
T ss_pred cCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc-CCEEEEE
Confidence 44444456778888888999999995 9999999999874 3455543
No 37
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.97 E-value=0.00026 Score=51.16 Aligned_cols=42 Identities=17% Similarity=-0.102 Sum_probs=32.3
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.-..+..|.+|+..-||+|....+.|.++.++|++ .++.+..
T Consensus 23 ~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~ 64 (151)
T 2f9s_A 23 DLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS-QGVEIVA 64 (151)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEE
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEE
Confidence 33456788888899999999999999999888763 2455543
No 38
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.96 E-value=0.00032 Score=49.23 Aligned_cols=37 Identities=14% Similarity=0.040 Sum_probs=29.8
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..+..|.+|+..-||+|....+.+.++.++|+ ++.+.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~ 60 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFV 60 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEE
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEE
Confidence 45677888889999999999999999988775 45544
No 39
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.94 E-value=0.00015 Score=52.46 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=31.6
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+..-||+|....+.+.++.++|+. .++.+..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~ 66 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN-KNFQVLA 66 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG-TTEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc-CCeEEEE
Confidence 456788888899999999999999999888863 2455543
No 40
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.94 E-value=0.00037 Score=50.68 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=32.7
Q ss_pred cCCcceEEEEEecccCchhhh-hHHHHHHHHHhcCCCCceeEEEe
Q 027910 9 AGKKLIRIDVSSDTVCPWCFV-GKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~-~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
.-..++.|..|+..-||.|.. ..+.|.++.++|+++ ++.+...
T Consensus 27 ~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v 70 (160)
T 3lor_A 27 DLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGL 70 (160)
T ss_dssp HHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEE
T ss_pred HhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEE
Confidence 334567788888889999999 599999999999743 4665543
No 41
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.89 E-value=0.00052 Score=48.77 Aligned_cols=40 Identities=13% Similarity=0.030 Sum_probs=31.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+..-||+|....+.+.++.++|+. .++.+..
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~ 72 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS-DSVKLVT 72 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC-SSEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CCEEEEE
Confidence 566778888899999999999999999998873 2455543
No 42
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.87 E-value=0.00035 Score=51.02 Aligned_cols=39 Identities=18% Similarity=0.103 Sum_probs=31.4
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..++.|.+|+..-||+|....+.+.++.++|++ .++.+.
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~v~~v 71 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS-RGFTFV 71 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TTEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEE
Confidence 456778888899999999999999999998874 345544
No 43
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.84 E-value=0.00093 Score=48.23 Aligned_cols=45 Identities=20% Similarity=0.070 Sum_probs=33.9
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+...-..++.|.+|+..-||.|-...+.|.++.++|.. .++.+..
T Consensus 18 ~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~~v~vv~ 62 (151)
T 3raz_A 18 SLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK-GSVDMVG 62 (151)
T ss_dssp CGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TTEEEEE
T ss_pred cHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEE
Confidence 33444567888888899999999999999999988853 3455543
No 44
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.83 E-value=0.00034 Score=49.03 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=31.1
Q ss_pred HHHHhCCCCeecEEEE---CCee--eecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv---~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 73 ~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 73 DLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 3456789999999988 6763 3579999999999998763
No 45
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.83 E-value=0.00057 Score=47.80 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=31.8
Q ss_pred cccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 7 SSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 7 ~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
...-..+..|.+|+..-||+|....+.+.++.++++. ++.+.
T Consensus 17 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v 58 (138)
T 4evm_A 17 LSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVL 58 (138)
T ss_dssp GGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEE
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEE
Confidence 3334557788888899999999999999999887543 45544
No 46
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.82 E-value=0.00024 Score=51.23 Aligned_cols=40 Identities=15% Similarity=-0.090 Sum_probs=31.7
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
-..+..|.+|+..-||+|....+.+.++.++|++ .++.+.
T Consensus 28 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v 67 (152)
T 2lja_A 28 LKGKYIYIDVWATWCGPCRGELPALKELEEKYAG-KDIHFV 67 (152)
T ss_dssp TTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT-SSEEEE
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc-CCeEEE
Confidence 3456788888899999999999999999988863 345554
No 47
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.82 E-value=0.00027 Score=47.81 Aligned_cols=39 Identities=18% Similarity=0.355 Sum_probs=31.2
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHhC
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 217 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~~ 217 (217)
.+.+.|+.|+||+++ +|+. .+.|..+.+.|.+.|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 65 VASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp HHHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HHHHCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 345678999999988 6763 35799999999999998754
No 48
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.78 E-value=0.00074 Score=47.45 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=29.6
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..+..|.+|+..-||+|....+.+.++.++|+ ++.+.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~ 59 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFV 59 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEE
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEE
Confidence 45677778889999999999999999988775 45544
No 49
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.76 E-value=0.00079 Score=48.04 Aligned_cols=41 Identities=10% Similarity=-0.032 Sum_probs=32.1
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+..-||+|....+.+.++.++|+...++.+..
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~ 72 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLG 72 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEE
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEE
Confidence 55788888889999999999999999999882233455543
No 50
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.73 E-value=0.00074 Score=45.67 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=30.6
Q ss_pred HHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.|+.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 67 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 45689999999998 7873 3579999999999998765
No 51
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.72 E-value=0.00037 Score=50.94 Aligned_cols=45 Identities=13% Similarity=0.032 Sum_probs=34.1
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
.-..++.|.+|+..-||+|....+.|.++.++|.. .++.|....+
T Consensus 35 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~ 79 (164)
T 2h30_A 35 LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF-SSANLITVAS 79 (164)
T ss_dssp CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG-TTSEEEEEEC
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc-CCcEEEEEEc
Confidence 33456788888899999999999999999887753 3566665433
No 52
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.69 E-value=0.00072 Score=48.84 Aligned_cols=35 Identities=14% Similarity=0.032 Sum_probs=26.9
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHH
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIA 39 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~ 39 (217)
++...-..++.|.+|+...||+|....+.+.++.+
T Consensus 35 ~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~ 69 (156)
T 1kng_A 35 LDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGK 69 (156)
T ss_dssp BCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTT
T ss_pred echHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHh
Confidence 44444456778888899999999998888877654
No 53
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.68 E-value=0.00059 Score=52.99 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=32.3
Q ss_pred HHHHHhCCCCeecEEEECCeee-ecCCCCHHHHHHHHHHH
Q 027910 177 ELKKYSANISGVPHFVLNGKHE-LSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv~g~~~-~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.+.||.|+||+++||+.. +.|..+.+.|.+.|++.
T Consensus 179 ~~l~~~~~v~~~Pt~~~~G~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 179 QDLAEQFQVVGVPKIVINKGVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHHHHHTTCCSSSEEEEGGGTEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCcccCEEEECCEEEEeeCCCCHHHHHHHHHHH
Confidence 3467789999999999988732 68999999999888765
No 54
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.67 E-value=0.00054 Score=46.75 Aligned_cols=38 Identities=13% Similarity=0.323 Sum_probs=30.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 69 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 69 TAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred HHHhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 345788999999988 7763 3679999999999998764
No 55
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.62 E-value=0.0019 Score=46.61 Aligned_cols=40 Identities=25% Similarity=0.192 Sum_probs=31.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+..-||.|-...+.+.++.++|++ .++.+..
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~ 67 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD-KGFTIYG 67 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT-TTEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc-CCeEEEE
Confidence 456788888899999999999999999988874 3455543
No 56
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.59 E-value=0.0011 Score=47.61 Aligned_cols=42 Identities=12% Similarity=-0.018 Sum_probs=32.8
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.-..++.|.+|+..-||+|....+.|.++.++|+. .++.+..
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~ 66 (152)
T 3gl3_A 25 DKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA-KGFQVVA 66 (152)
T ss_dssp GGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG-GTEEEEE
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc-CCeEEEE
Confidence 33457788888899999999999999999998874 2355543
No 57
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.58 E-value=0.00088 Score=45.16 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=27.6
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..|.+|+..-||+|....+.+.++.++|++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~ 52 (109)
T 3tco_A 21 NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG 52 (109)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC
Confidence 56778888899999999999999998887753
No 58
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.55 E-value=0.0016 Score=43.72 Aligned_cols=33 Identities=9% Similarity=-0.112 Sum_probs=27.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..|.+|+.+-||+|....+.+.++.++|++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~ 51 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG 51 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC
Confidence 456788888899999999999999998887753
No 59
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.54 E-value=0.00095 Score=45.41 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=26.2
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|.+|+.+-||+|....+.+.++.++|+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 54 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA 54 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC
Confidence 4567778888999999999999998888765
No 60
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.53 E-value=0.00067 Score=50.95 Aligned_cols=34 Identities=12% Similarity=0.001 Sum_probs=29.2
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
-..++.|..|+..-||.|....+.|.++.++|.+
T Consensus 31 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~ 64 (188)
T 2cvb_A 31 FHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG 64 (188)
T ss_dssp CCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT
T ss_pred hCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc
Confidence 3457788888899999999999999999998875
No 61
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.53 E-value=0.0016 Score=44.38 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=30.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 71 ~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 71 TVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 355788999999988 7873 3579999999999998764
No 62
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.53 E-value=0.0009 Score=44.92 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=28.1
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..+.+|+..-||+|....+.+.++.++|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~ 50 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEG 50 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC
Confidence 456778888899999999999999999887764
No 63
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.52 E-value=0.0015 Score=45.24 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=31.1
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 77 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 77 LAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 456778999999988 7873 3579989999999998865
No 64
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.49 E-value=0.0013 Score=46.49 Aligned_cols=33 Identities=9% Similarity=-0.165 Sum_probs=28.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..|.+|+..-||+|....+.+.++.++|++
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~ 71 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG 71 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC
Confidence 457788888999999999999999998887753
No 65
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.49 E-value=0.0016 Score=43.62 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=30.0
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|+++
T Consensus 64 ~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 64 IATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred HHHhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 456778999999988 7763 357999999999999875
No 66
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.48 E-value=0.0011 Score=45.38 Aligned_cols=31 Identities=10% Similarity=-0.078 Sum_probs=26.6
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|.+|+.+-||+|....+.+.++.++|+
T Consensus 26 ~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~ 56 (112)
T 1syr_A 26 NELVIVDFFAEWCGPCKRIAPFYEECSKTYT 56 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC
Confidence 4678888889999999999999999888764
No 67
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.47 E-value=0.00096 Score=44.82 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=29.5
Q ss_pred HHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.|+.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 64 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 64 TSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 45678999999988 7863 3579999999998887654
No 68
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.47 E-value=0.0017 Score=43.12 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=30.8
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.+.+.|+++.
T Consensus 61 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 61 IAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp HHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 455688999999998 7873 3579999999999998764
No 69
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.43 E-value=0.00022 Score=45.33 Aligned_cols=57 Identities=16% Similarity=0.312 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC-CHHHHHHHH
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 212 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~-~~~~l~~~i 212 (217)
..|.+++++.+.+.....++ +.+.+.+.||.|+||+++||+....|.. +.+.|.+.|
T Consensus 19 ~~l~~~~~~~~~~~~~~~v~----------~~~~~~~~~v~~~Pt~~~~G~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 19 KNAREAVKELGIDAEFEKIK----------EMDQILEAGLTALPGLAVDGELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHTTCCEEEEEEC----------SHHHHHHHTCSSSSCEEETTEEEECSSCCCHHHHHHHC
T ss_pred HHHHHHHHHcCCceEEEEec----------CHHHHHHCCCCcCCEEEECCEEEEcCCCCCHHHHHHHh
Confidence 34556666665432222333 3456678899999999999986566887 888887764
No 70
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.42 E-value=0.0019 Score=43.77 Aligned_cols=39 Identities=13% Similarity=0.223 Sum_probs=31.1
Q ss_pred HHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
..+.+.||.++||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 67 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 67 TLFQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp HHHHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred hHHHhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 3456778999999988 7863 3579999999999998764
No 71
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.41 E-value=0.004 Score=45.26 Aligned_cols=41 Identities=12% Similarity=0.034 Sum_probs=30.8
Q ss_pred CcceEEEEEecccCch-hhhhHHHHHHHHHhcCCC---CceeEEE
Q 027910 11 KKLIRIDVSSDTVCPW-CFVGKRNLDKAIASSKDQ---YDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~-cy~~~~~l~~~~~~~~~~---~~v~v~~ 51 (217)
..++.|.+|+-.-||. |-...+.|.++.++|+.. .++.+..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~ 66 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLF 66 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEE
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEE
Confidence 4567788888899997 999999999998877531 2455544
No 72
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.38 E-value=0.0022 Score=44.90 Aligned_cols=32 Identities=9% Similarity=-0.008 Sum_probs=26.6
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+..-||+|....+.+.++.++|+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~ 68 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP 68 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
Confidence 35677888888999999999999998888764
No 73
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.37 E-value=0.0016 Score=46.92 Aligned_cols=29 Identities=14% Similarity=0.125 Sum_probs=25.8
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
+..|.+|+..-||+|....+.|.++.++|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~ 59 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET 59 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc
Confidence 67788888999999999999999998876
No 74
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.37 E-value=0.0012 Score=47.67 Aligned_cols=39 Identities=21% Similarity=0.146 Sum_probs=31.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..+..|.+|+..-||+|....+.+.++.++|++ .++.+.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v 65 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG-KPFRML 65 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEE
Confidence 456778888899999999999999999998874 345544
No 75
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.35 E-value=0.0021 Score=43.11 Aligned_cols=37 Identities=22% Similarity=0.432 Sum_probs=29.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|+++
T Consensus 64 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 64 TAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHH
Confidence 355788999999988 7873 357998999999998765
No 76
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.35 E-value=0.0024 Score=44.13 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=29.4
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.|+||+++ +|+. .+.|.. .+.|.+.|+++.
T Consensus 79 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 79 IAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 355678999999988 7863 357888 999999998764
No 77
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.34 E-value=0.0015 Score=45.44 Aligned_cols=38 Identities=26% Similarity=0.354 Sum_probs=29.5
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHhC
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 217 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~~ 217 (217)
.+.+.||.|+||+++ +|+. .+.|.. .+.+.+.|+++.+
T Consensus 83 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 83 LAKELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp HHHHHCCSSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred HHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 345678999999988 7873 347876 8999999998764
No 78
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.33 E-value=0.002 Score=47.29 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=24.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIA 39 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~ 39 (217)
..++.|.+|+..-||+|....+.+.++.+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~ 78 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSA 78 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHH
Confidence 45667777888999999999999988776
No 79
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.32 E-value=0.00094 Score=47.51 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=31.7
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHH---HHHhcCCCCceeEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDK---AIASSKDQYDFEIR 50 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~---~~~~~~~~~~v~v~ 50 (217)
+...-..++.|.+|+..-||.|....+.+.+ +.++|++ .++.+.
T Consensus 21 ~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v 67 (142)
T 3ewl_A 21 RMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVL 67 (142)
T ss_dssp EGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEE
T ss_pred EhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEE
Confidence 3344456788888899999999999888877 7776653 345554
No 80
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.31 E-value=0.0041 Score=44.19 Aligned_cols=33 Identities=12% Similarity=-0.053 Sum_probs=28.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..|.+|+.+-||+|....+.+.++.++|++
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~ 82 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG 82 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC
Confidence 457778888889999999999999999887764
No 81
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.31 E-value=0.016 Score=43.55 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=31.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+..-||.|-...+.|.++.++|++ .+++|...
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~v 87 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKS-QGFTVLAF 87 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTCEEEEE
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence 456777788889999999999999999998874 24666543
No 82
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.30 E-value=0.0021 Score=49.59 Aligned_cols=40 Identities=28% Similarity=0.444 Sum_probs=32.1
Q ss_pred HHHHHhCCCCeecEEEE--CCe--eeecCCCCHHHHHHHHHHHh
Q 027910 177 ELKKYSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv--~g~--~~~~G~~~~~~l~~~i~~~~ 216 (217)
...+.+.||.|+||+++ +|+ ..+.|..+.+.|.+.|++..
T Consensus 182 ~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 182 PEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 34577899999999988 454 34689999999999998764
No 83
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.28 E-value=0.0027 Score=44.52 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=28.4
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
...++.|..|+..-||+|....+.+.++.++|+
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~ 72 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG 72 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 456788888889999999999999999888765
No 84
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.27 E-value=0.0022 Score=43.62 Aligned_cols=31 Identities=6% Similarity=-0.200 Sum_probs=26.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|..|+.+-||+|....+.+.++.++|+
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~ 54 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL 54 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC
Confidence 4567778888999999999999998888765
No 85
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.26 E-value=0.0022 Score=43.78 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=29.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 64 l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 64 LMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp HHHHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC
T ss_pred HHHHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHH
Confidence 455779999999998 8873 346999999999988753
No 86
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.23 E-value=0.0012 Score=47.05 Aligned_cols=45 Identities=11% Similarity=0.028 Sum_probs=34.1
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+...-..++.|.+|+..-||+|....+.+.++.++|+++ ++.+..
T Consensus 25 ~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~ 69 (148)
T 3hcz_A 25 YLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYA 69 (148)
T ss_dssp CGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEE
T ss_pred EhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEE
Confidence 333445578888888999999999999999999988742 455543
No 87
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.22 E-value=0.0033 Score=44.88 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=27.6
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..|.+|+.+-||+|....+.+.++.++|++
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~ 55 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS 55 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCC
Confidence 56778888899999999999999999887764
No 88
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.20 E-value=0.0042 Score=44.24 Aligned_cols=46 Identities=4% Similarity=-0.200 Sum_probs=34.5
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
++...-..++.|..|+-.-||.|....+.|.++.++|++. ++.+..
T Consensus 25 ~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~ 70 (143)
T 4fo5_A 25 ASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCS 70 (143)
T ss_dssp CCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEE
T ss_pred EEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEE
Confidence 3444445577888888899999999999999999888743 455543
No 89
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.016 Score=41.40 Aligned_cols=41 Identities=7% Similarity=-0.208 Sum_probs=31.5
Q ss_pred CcceEEEEEecccCch--hhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPW--CFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~--cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+-.-||. |-...+.|.++.++|....++.+..
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~ 74 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLG 74 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 4567778888899999 9999999999999882233455543
No 90
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.17 E-value=0.0062 Score=41.52 Aligned_cols=36 Identities=14% Similarity=0.245 Sum_probs=29.3
Q ss_pred HHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 180 KYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
+.+.||.++||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 64 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 64 AGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 45678999999988 8873 357999999999988753
No 91
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.13 E-value=0.0084 Score=43.74 Aligned_cols=38 Identities=21% Similarity=0.429 Sum_probs=31.2
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 110 l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 110 VAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 456789999999988 7873 3689999999999998764
No 92
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.13 E-value=0.0048 Score=41.50 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=27.0
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..+..|+.+-||.|....+.+.++.++|+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~ 48 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN 48 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC
Confidence 45677888888999999999999999888663
No 93
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.11 E-value=0.0055 Score=45.59 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=26.3
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHH
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIA 39 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~ 39 (217)
+...-..++.|.+|+..-||+|-...+.|.++.+
T Consensus 52 ~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~ 85 (176)
T 3kh7_A 52 TEADLKGKPALVNVWGTWCPSCRVEHPELTRLAE 85 (176)
T ss_dssp EGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHH
Confidence 3333445677888889999999999999988876
No 94
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.10 E-value=0.0074 Score=40.60 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=29.6
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 70 l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 70 ICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred HHHhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 345679999999988 7763 457999999999998864
No 95
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.09 E-value=0.0066 Score=41.43 Aligned_cols=31 Identities=13% Similarity=-0.030 Sum_probs=25.7
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|.+|+..-||+|....+.+.++.++|+
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 58 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP 58 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC
Confidence 4567788888999999999999988887664
No 96
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.014 Score=42.99 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=33.0
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
+...-..++.|..|+..-||.|- ..+.|.++.++|++ .++.|...
T Consensus 26 ~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~-~~v~vv~v 70 (171)
T 3cmi_A 26 PFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKD-EGFTIIGF 70 (171)
T ss_dssp CGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG-GTEEEEEE
T ss_pred cHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc-CCeEEEEE
Confidence 33333456778888889999999 99999999998874 24555443
No 97
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.02 E-value=0.011 Score=42.01 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=30.6
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 96 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 96 LAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 455678999999988 7873 3579999999999998764
No 98
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.01 E-value=0.014 Score=43.29 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=29.4
Q ss_pred ccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 8 SAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 8 ~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..-..++.|.+|+..-||+|....+.|.++.++|++
T Consensus 55 ~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~ 90 (183)
T 3lwa_A 55 SDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQA 90 (183)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHh
Confidence 333457788888889999999999999999888764
No 99
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.00 E-value=0.012 Score=49.06 Aligned_cols=44 Identities=9% Similarity=-0.037 Sum_probs=33.0
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
+...-..++.|..|+..-||.|-...+.|.++.++|++ .++.|.
T Consensus 76 sLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~-~~v~vi 119 (352)
T 2hyx_A 76 DLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD-SGLAVI 119 (352)
T ss_dssp CGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEE
T ss_pred cHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc-CCeEEE
Confidence 33334456778888889999999999999999998864 245554
No 100
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.99 E-value=0.011 Score=41.87 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=27.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..|.+|+..-||+|....+.+.++.++|++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~ 69 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG 69 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC
Confidence 346778888889999999999999988887753
No 101
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=96.97 E-value=0.023 Score=41.38 Aligned_cols=44 Identities=11% Similarity=0.008 Sum_probs=32.9
Q ss_pred cCCcceEEEEEecccCch-hhhhHHHHHHHHHhcCCC---CceeEEEe
Q 027910 9 AGKKLIRIDVSSDTVCPW-CFVGKRNLDKAIASSKDQ---YDFEIRWH 52 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~-cy~~~~~l~~~~~~~~~~---~~v~v~~~ 52 (217)
.-..++.|.+|+-.-||. |-...+.|.++.++|... .++++...
T Consensus 23 ~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~i 70 (171)
T 2rli_A 23 DFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFI 70 (171)
T ss_dssp TTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEE
T ss_pred HhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 334578888888899998 999999999998887521 24665543
No 102
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.95 E-value=0.0027 Score=45.14 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=37.3
Q ss_pred chhHHHHHHHHHhCCCCeecEEEE--CCe--eeecCCCCHHHHHHHHHHHh
Q 027910 170 GLNEVHEELKKYSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 170 ~~~~~~~~~~a~~~gv~g~Pt~vv--~g~--~~~~G~~~~~~l~~~i~~~~ 216 (217)
...+.++.+.+.+.||.|+||+++ +|+ ..+.|..+.+.+...|+++.
T Consensus 75 ~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 75 ERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred hhhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 344556667788999999999988 576 34689999999999998764
No 103
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.91 E-value=0.0073 Score=41.57 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=28.4
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.|. +.+.|.+.|+++
T Consensus 76 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 76 VASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp HHHHTTCCSSSEEEEESSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHcCCccccEEEEEeCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 346678999999988 6753 35788 999999999875
No 104
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=96.91 E-value=0.003 Score=47.53 Aligned_cols=36 Identities=8% Similarity=0.030 Sum_probs=29.2
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..|.+|+..-||.|-...+.|.++.++|++ .++.+.
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv 83 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMP-KGVSFV 83 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGG-GTCEEE
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHh-CCcEEE
Confidence 478888899999999999999999988874 245554
No 105
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.88 E-value=0.012 Score=41.26 Aligned_cols=32 Identities=13% Similarity=0.194 Sum_probs=26.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+.+-||+|....+.+.++.++|+
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~ 67 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP 67 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC
Confidence 34667788888999999999999998887663
No 106
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.84 E-value=0.017 Score=41.40 Aligned_cols=33 Identities=12% Similarity=-0.039 Sum_probs=27.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..|..|+..-||+|....+.+.++.++|.+
T Consensus 54 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~ 86 (148)
T 3p2a_A 54 DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG 86 (148)
T ss_dssp CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT
T ss_pred cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC
Confidence 456678888889999999999999998887753
No 107
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.014 Score=39.44 Aligned_cols=32 Identities=6% Similarity=-0.044 Sum_probs=24.4
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
...+..|..|+..-||+|....+.+.++.++|
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~ 50 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEP 50 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCG
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 34567788888899999999999999887764
No 108
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.77 E-value=0.034 Score=40.38 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=30.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+-.-||.|-...+.|.++.++|+++ ++.|..
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~ 70 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILA 70 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEE
Confidence 4466777777799999999999999999988742 455543
No 109
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.67 E-value=0.021 Score=41.33 Aligned_cols=30 Identities=10% Similarity=-0.009 Sum_probs=25.3
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.+..|..|+.+-||+|....+.+.++.++|
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 61 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL 61 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc
Confidence 566788888899999999999998888765
No 110
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=96.67 E-value=0.032 Score=42.91 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=30.5
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
++.|.+|+-.-||.|-...+.|.++.++|++ .++.|..
T Consensus 60 ~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~ 97 (218)
T 3u5r_E 60 PALLVAFISNRCPFVVLIREALAKFAGDYAG-QGLAVVA 97 (218)
T ss_dssp SEEEEEECCSSCHHHHTTHHHHHHHHHHHTT-TTEEEEE
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHHHHh-CCcEEEE
Confidence 3577888889999999999999999999874 3455543
No 111
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.65 E-value=0.0032 Score=45.54 Aligned_cols=66 Identities=11% Similarity=-0.033 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 145 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 145 ~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
..+|.+++++.+=..-.+ ++-.+.++.+.|.+.||.++|||++ ||+. .+.|..+.+.|++.|++..
T Consensus 55 aPvleela~e~~g~~v~~------~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 55 PVMIGELLHEFPDYTWQV------AIADLEQSEAIGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp HHHHHHHHTTCTTSCCEE------EECCHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHcCCCeEEE------EEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 456677776652110112 2334667788899999999999988 7874 4689999999999998654
No 112
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=96.62 E-value=0.0089 Score=42.42 Aligned_cols=42 Identities=7% Similarity=-0.042 Sum_probs=32.4
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHHH---HHHhcCCCCceeEEE
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLDK---AIASSKDQYDFEIRW 51 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~~---~~~~~~~~~~v~v~~ 51 (217)
.-..+..|.+|+..-||.|....+.|.+ +.++|++ .++.+..
T Consensus 28 ~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~ 72 (142)
T 3eur_A 28 QFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA-KKLKVLS 72 (142)
T ss_dssp TCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEE
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEE
Confidence 3345778888889999999999999999 8888764 3565543
No 113
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.55 E-value=0.0032 Score=43.07 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=29.0
Q ss_pred HHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
.+.+.||.|+|||+|+|+ .+.|..+.+.|.+.+.
T Consensus 58 l~~~~~V~~~PT~~i~G~-~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 58 ECTEAGITSYPTWIINGR-TYTGVRSLEALAVASG 91 (106)
T ss_dssp HHHHTTCCSSSEEEETTE-EEESCCCHHHHHHHHT
T ss_pred HHHHcCCeEeCEEEECCE-EecCCCCHHHHHHHhC
Confidence 456789999999999998 5899999999888763
No 114
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.44 E-value=0.013 Score=38.43 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=37.3
Q ss_pred HHHHHHHcCCCcccccccC--cccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 148 LVECARKVGVEGAAEFLDD--PNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 148 L~~ia~~~Gld~~~~~l~~--~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
+..++++.|++-+...++. ++-...+. .+.....|+.++|++++||+ .+.|. +.+.|.+.|+
T Consensus 28 ~~~~L~~~gi~~~~~~v~~~~~~~~~~~~--~~l~~~~g~~~vP~l~~~g~-~i~G~-~~~~l~~~l~ 91 (92)
T 3ic4_A 28 TLEFLKREGVDFEVIWIDKLEGEERKKVI--EKVHSISGSYSVPVVVKGDK-HVLGY-NEEKLKELIR 91 (92)
T ss_dssp HHHHHHHHTCCCEEEEGGGCCHHHHHHHH--HHHHHHHSSSCSCEEEETTE-EEESC-CHHHHHHHHH
T ss_pred HHHHHHHcCCCcEEEEeeeCCccchHHHH--HHHHHhcCCCCcCEEEECCE-EEeCC-CHHHHHHHhc
Confidence 4455566677655442221 11111111 22334568899999999998 56777 7888888774
No 115
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.36 E-value=0.037 Score=44.13 Aligned_cols=33 Identities=9% Similarity=-0.080 Sum_probs=27.1
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..++.|..|+-+-||+|....+.+.++.++|++
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~ 57 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNG 57 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC
Confidence 356677777789999999999999999888764
No 116
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=96.25 E-value=0.063 Score=39.11 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=30.6
Q ss_pred CcceEEEEEecccCc-hhhhhHHHHHHHHHhcCCCC-ceeEEE
Q 027910 11 KKLIRIDVSSDTVCP-WCFVGKRNLDKAIASSKDQY-DFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP-~cy~~~~~l~~~~~~~~~~~-~v~v~~ 51 (217)
..++.|..|+-.-|| .|-...+.|.++.++|+... +++|..
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~ 74 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIIS 74 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 446677788889999 99999999999888776432 255543
No 117
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=96.21 E-value=0.024 Score=38.68 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=41.9
Q ss_pred HHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC-CHHHHHHHH
Q 027910 151 CARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 212 (217)
Q Consensus 151 ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~-~~~~l~~~i 212 (217)
.+++.|++.+++ ...+|..=..-..-.+...+.|+.++|.++|||+....|.. +.++|.+.+
T Consensus 38 ~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~VDGevv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 38 SLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLVDGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp HHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEETTEEEECSSCCCHHHHHHHH
T ss_pred HHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEEeccCCCHHHHHHHh
Confidence 345568988888 44455321111122344567999999999999997778864 578887765
No 118
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.17 E-value=0.0055 Score=42.83 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=30.2
Q ss_pred HHhCCCCeecEEEE--CCe--eeecCCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~--~~~~G~~~~~~l~~~i~~~~ 216 (217)
+...+|.|+|||++ +|+ ..+.|+.+.+.|.+.|+++.
T Consensus 69 a~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 69 ELARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp BCSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHH
Confidence 34668999999988 676 35789999999999998763
No 119
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.16 E-value=0.0066 Score=43.70 Aligned_cols=64 Identities=11% Similarity=0.015 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 145 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 145 ~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
..+|.+++++.+=. -.+ ++-.+.++.+.+.+.||.++|||++ ||+. .+.|..+.+.|.+.|++.
T Consensus 54 aPvleela~e~~~~-v~~------~KVdvDe~~~la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 54 AVVLPELINAFPGR-LVA------AEVAAEAERGLMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp HHHHHHHHHTSTTT-EEE------EEECGGGHHHHHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHH
T ss_pred HhHHHHHHHHccCC-cEE------EEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 35677777765311 122 1223445677899999999999988 7874 468999999999988764
No 120
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=96.12 E-value=0.07 Score=39.46 Aligned_cols=41 Identities=17% Similarity=0.059 Sum_probs=32.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+..-||.|-...+.|.++.++|+. .++.+...
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v 99 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSG-PNFEVVAI 99 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB-TTEEEEEE
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc-CCcEEEEE
Confidence 456778888889999999999999999988873 35666543
No 121
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=96.10 E-value=0.17 Score=36.42 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=31.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|..|+-.-||.|-...+.|.++.++|++ .++.+...
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v 70 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG-KGLRILAF 70 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc-CCeEEEEE
Confidence 446677777779999999999999999998874 34665543
No 122
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.06 E-value=0.013 Score=42.19 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=32.9
Q ss_pred HHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 175 HEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 175 ~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
++.+.+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 79 ~~~~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 79 QSEAIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp HHHHHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHH
T ss_pred CCHHHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4556778999999999988 6762 3579999999999998764
No 123
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.04 E-value=0.014 Score=36.36 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 148 LVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 148 L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
+..+.++.|++-....++.. ..+.+ .....|+.++|++++||+ .+.|. +.+.+.+.|+
T Consensus 17 ~~~~l~~~~i~~~~~di~~~---~~~~~---~~~~~~~~~vP~l~~~g~-~~~g~-~~~~l~~~l~ 74 (75)
T 1r7h_A 17 TKKALDRAGLAYNTVDISLD---DEARD---YVMALGYVQAPVVEVDGE-HWSGF-RPERIKQLQA 74 (75)
T ss_dssp HHHHHHHTTCCCEEEETTTC---HHHHH---HHHHTTCBCCCEEEETTE-EEESC-CHHHHHHHHC
T ss_pred HHHHHHHcCCCcEEEECCCC---HHHHH---HHHHcCCCccCEEEECCe-EEcCC-CHHHHHHHHh
Confidence 44455566776544333321 11111 224689999999999998 46676 5677777664
No 124
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.04 E-value=0.057 Score=39.14 Aligned_cols=35 Identities=14% Similarity=0.009 Sum_probs=27.5
Q ss_pred EEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 15 RIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 15 ~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.|.+|+ ..-||.|-...+.|.++.++|++ .++.+.
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv 67 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKD-YDVVVI 67 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHT-TCEEEE
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHH-cCCEEE
Confidence 566666 99999999999999999988874 345554
No 125
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.94 E-value=0.03 Score=43.74 Aligned_cols=40 Identities=8% Similarity=-0.056 Sum_probs=30.7
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCC-CceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQ-YDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~-~~v~v~~ 51 (217)
.+..|..|+..-||+|....+.+.++.++|++. ..+.+..
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~ 70 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAA 70 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEE
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEE
Confidence 367788888899999999999999999887631 1355543
No 126
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.94 E-value=0.08 Score=39.21 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=31.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+-.-||.|-...+.|.++.++|++ .++.|..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~v~vv~ 87 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGP-HHFNVLA 87 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEE
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc-CCEEEEE
Confidence 456778888888999999999999999998874 2455543
No 127
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=95.88 E-value=0.027 Score=38.70 Aligned_cols=63 Identities=17% Similarity=0.242 Sum_probs=42.1
Q ss_pred HHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC-CHHHHHHHH
Q 027910 150 ECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 212 (217)
Q Consensus 150 ~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~-~~~~l~~~i 212 (217)
+.+++.|++.+++ ...+|..=..-..-.+...+.|+.++|.++|||+..+.|.. +.++|.+.+
T Consensus 34 ~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~VDGevv~~G~yPt~eEl~~~l 98 (110)
T 3kgk_A 34 QWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLLDGETVMAGRYPKRAELARWF 98 (110)
T ss_dssp HHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEETTEEEEESSCCCHHHHHHHH
T ss_pred HHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEEeccCCCHHHHHHHh
Confidence 3445569998888 44445311111112344567899999999999997778864 578887765
No 128
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=95.88 E-value=0.0092 Score=40.62 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=28.9
Q ss_pred HHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 178 LKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
+.+.+.||.|+|||++ +|+. .+.|. +.+.|.+.|++-
T Consensus 64 ~l~~~~~V~~~PT~~~~~~G~~v~~~~G~-~~~~l~~~i~k~ 104 (105)
T 3zzx_A 64 DIAQDNQIACMPTFLFMKNGQKLDSLSGA-NYDKLLELVEKN 104 (105)
T ss_dssp HHHHHTTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHcCCCeecEEEEEECCEEEEEEeCc-CHHHHHHHHHhc
Confidence 4567899999999988 6762 35785 788899988763
No 129
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=95.87 E-value=0.3 Score=35.97 Aligned_cols=45 Identities=13% Similarity=0.009 Sum_probs=34.3
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+...-..++.|.+|+-.-||.|-...+.|.++.++|++ .++.|..
T Consensus 32 ~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~~~vi~ 76 (180)
T 3kij_A 32 SLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP-SHFSVLA 76 (180)
T ss_dssp EGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT-TSEEEEE
T ss_pred cHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc-CCeEEEE
Confidence 33333456888888889999999999999999999975 3455543
No 130
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=95.87 E-value=0.077 Score=39.58 Aligned_cols=49 Identities=14% Similarity=0.072 Sum_probs=35.9
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
++...-..++.|..|+-.-||.|-...+.|.++.++|+++ ++.|...++
T Consensus 39 ~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~ 87 (187)
T 3dwv_A 39 YNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPS 87 (187)
T ss_dssp CCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEB
T ss_pred eeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEEC
Confidence 3333344567777788889999999999999999998753 566654433
No 131
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.83 E-value=0.014 Score=45.97 Aligned_cols=39 Identities=23% Similarity=0.203 Sum_probs=33.6
Q ss_pred HHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
..+.+.||.|+||+++||+..+.|..+.+.|.+.|++..
T Consensus 187 ~~~~~~~V~~vPt~~i~G~~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 187 DIADKYGVMSVPSIAINGYLVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeCeEEECCEEEEeCCCCHHHHHHHHHHHh
Confidence 456688999999999999866789999999999988754
No 132
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.78 E-value=0.087 Score=40.06 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=28.7
Q ss_pred HHHhCCCCeecEEEE--CCe--eeecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~--~~~~G~~~~~~l~~~i~~~ 215 (217)
.+...||.|+||+++ +|+ ..+.|..+.+.|.+.|++.
T Consensus 160 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 160 LCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQH 200 (210)
T ss_dssp HHHHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHH
T ss_pred HHHHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHh
Confidence 344568999999988 665 2457888999999998865
No 133
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.58 E-value=0.037 Score=37.81 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=30.4
Q ss_pred HHHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHH
Q 027910 174 VHEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 174 ~~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~ 213 (217)
......+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|+
T Consensus 74 ~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 74 NDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 33445667899999999977 6763 3579989999888774
No 134
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.53 E-value=0.0075 Score=38.50 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=23.1
Q ss_pred hCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 182 SANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 182 ~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
+.|+.++|+++++|+ .+.|. +.+.+.+.|+
T Consensus 45 ~~g~~~vP~~~~~g~-~~~g~-~~~~l~~~l~ 74 (81)
T 1h75_A 45 AQGFRQLPVVIAGDL-SWSGF-RPDMINRLHP 74 (81)
T ss_dssp HTTCCSSCEEEETTE-EEESC-CHHHHGGGSC
T ss_pred HhCCCccCEEEECCE-EEecC-CHHHHHHHHh
Confidence 579999999999998 46675 5666766654
No 135
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.52 E-value=0.012 Score=40.42 Aligned_cols=57 Identities=19% Similarity=-0.041 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEE--EECCeeeecCCCCHHHHHHHH
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHF--VLNGKHELSGGQPPEVYLRAF 212 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~--vv~g~~~~~G~~~~~~l~~~i 212 (217)
..|.+++++.|++.....+++ +.+.+.+.|+. +|++ ++||+....|..+.+.|.+.|
T Consensus 48 ~~L~~l~~e~~i~~~~vDId~---------d~~l~~~ygv~-VP~l~~~~dG~~v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 48 ASLRVLQKKSWFELEVINIDG---------NEHLTRLYNDR-VPVLFAVNEDKELCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHSCCCCEEEETTT---------CHHHHHHSTTS-CSEEEETTTTEEEECSSCCCHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEECCC---------CHHHHHHhCCC-CceEEEEECCEEEEecCCCHHHHHHHh
Confidence 445666777777655443332 12245567887 9999 668986556877888887766
No 136
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=95.45 E-value=0.19 Score=37.29 Aligned_cols=40 Identities=13% Similarity=-0.023 Sum_probs=31.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+-.-||.|-...+.|.++.++|++ .+++|..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~ 87 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE-CGLRILA 87 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc-CCeEEEE
Confidence 446778888889999999999999999998874 2455543
No 137
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=95.35 E-value=0.22 Score=36.52 Aligned_cols=49 Identities=18% Similarity=0.243 Sum_probs=32.9
Q ss_pred cCCcceEEEEEecccCc-hhhhhHHHHHHHHHhcCCCCceeEEEeecccCC
Q 027910 9 AGKKLIRIDVSSDTVCP-WCFVGKRNLDKAIASSKDQYDFEIRWHPFFLNP 58 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP-~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l~~ 58 (217)
.=..++.|..|+-..|| +|-...+.|.++.+.++. .+.+|.+..+++++
T Consensus 29 d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~-~~~~v~~v~isvDp 78 (170)
T 4hde_A 29 DLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE-EKLDVQFVSFSVDP 78 (170)
T ss_dssp HHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH-TTCCCEEEEEESCT
T ss_pred HhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc-ccccceeEeeecCc
Confidence 33456777777778998 898888888887776653 23344444556555
No 138
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=95.29 E-value=0.15 Score=37.60 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=31.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+-.-||.|-...+.|.++.++|.+ .++.|..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~ 85 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE-CGLRILA 85 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEE
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc-CCeEEEE
Confidence 456777888889999999999999999998874 2455543
No 139
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=95.07 E-value=0.14 Score=38.58 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=30.8
Q ss_pred CcceEEEEEecccCch-hhhhHHHHHHHHHhcCCC--CceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPW-CFVGKRNLDKAIASSKDQ--YDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~-cy~~~~~l~~~~~~~~~~--~~v~v~~~ 52 (217)
..++.|.+|+-.-||. |-...+.|.++.++|..+ .++.|...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~I 84 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFI 84 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEE
Confidence 4567788888899997 999999999987766532 24665543
No 140
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.03 E-value=0.29 Score=36.56 Aligned_cols=40 Identities=15% Similarity=-0.033 Sum_probs=31.1
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+ -.-||.|-...+.|.++.++|+. .+++|..
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~ 84 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED-RDAQILG 84 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT-TTEEEEE
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 4467777777 89999999999999999888864 3465543
No 141
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=95.01 E-value=0.041 Score=37.15 Aligned_cols=31 Identities=13% Similarity=0.007 Sum_probs=25.7
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.++.|..|+..-||+|....+.+.++.++|+
T Consensus 24 ~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~ 54 (109)
T 3f3q_A 24 DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP 54 (109)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC
Confidence 5677888888899999999999988877664
No 142
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.00 E-value=0.037 Score=38.92 Aligned_cols=41 Identities=15% Similarity=0.287 Sum_probs=32.0
Q ss_pred HHHHHHhCCCCeecEEEE---CCee----eecCCCCHHHHHHHHHHHh
Q 027910 176 EELKKYSANISGVPHFVL---NGKH----ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 176 ~~~~a~~~gv~g~Pt~vv---~g~~----~~~G~~~~~~l~~~i~~~~ 216 (217)
+...+.+.||.|+||+++ +|+. .+.|..+.+.|++.|+++.
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 445677899999999977 4663 3579999999999998754
No 143
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=94.99 E-value=0.27 Score=34.09 Aligned_cols=34 Identities=9% Similarity=0.181 Sum_probs=25.5
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 5 M~i~iY~~~~C~~C~ka~~~L~~--------~gi~y~~~di~ 38 (120)
T 2kok_A 5 MSVTIYGIKNCDTMKKARIWLED--------HGIDYTFHDYK 38 (120)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHH--------HTCCEEEEEHH
T ss_pred cEEEEEECCCChHHHHHHHHHHH--------cCCcEEEEeee
Confidence 46889999999999988776653 25667666554
No 144
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=94.90 E-value=0.057 Score=37.37 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=31.6
Q ss_pred HHHHHhCCCCeecEEEE---CCee--eecCCCCHHHHHHHHHHHh
Q 027910 177 ELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv---~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
...+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 76 ~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 76 VELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp HHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 34567889999999987 5653 3579999999999998764
No 145
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=94.88 E-value=0.037 Score=38.12 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=29.8
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHhC
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 217 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~~ 217 (217)
.+.+.|+.++||+++ +|+. .+.|. +.+.|.+.|+++.+
T Consensus 80 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred HHHHcCCCcccEEEEEECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 345678999999988 7763 35788 89999999988753
No 146
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=94.84 E-value=0.073 Score=39.15 Aligned_cols=62 Identities=10% Similarity=0.074 Sum_probs=41.2
Q ss_pred HHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEE--CCee-----------eecCCCC-HHHHHH
Q 027910 146 EFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVL--NGKH-----------ELSGGQP-PEVYLR 210 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv--~g~~-----------~~~G~~~-~~~l~~ 210 (217)
.+|.+++++.+=. ..| .++-++.. +.+.+.||.++|||++ +|+. ++.|+.+ .++|++
T Consensus 61 PvleelA~e~~~~-v~f~kVDVDe~~-------e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~ 132 (160)
T 2av4_A 61 ELLYKVADDIKNF-CVIYLVDITEVP-------DFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFID 132 (160)
T ss_dssp HHHHHHHHHHTTT-EEEEEEETTTCC-------TTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHH
T ss_pred HHHHHHHHHccCC-cEEEEEECCCCH-------HHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHH
Confidence 5677777775311 234 33333322 2478999999999964 7775 4679887 888888
Q ss_pred HHHHH
Q 027910 211 AFQVA 215 (217)
Q Consensus 211 ~i~~~ 215 (217)
.|+++
T Consensus 133 ~ie~~ 137 (160)
T 2av4_A 133 IVETI 137 (160)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 147
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=94.81 E-value=0.1 Score=34.60 Aligned_cols=64 Identities=9% Similarity=-0.001 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCccccccc-CcccchhHHHHHHHHHhCCCCeecEEEEC-CeeeecCCCCHHHHHHHHHHHh
Q 027910 146 EFLVECARKVGVEGAAEFLD-DPNSGLNEVHEELKKYSANISGVPHFVLN-GKHELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~-~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~-g~~~~~G~~~~~~l~~~i~~~~ 216 (217)
...++++++.|++-....++ +++.++.+ .....|..+||+++|+ |. .+.|. +.+++.+.|.++.
T Consensus 18 ~~aK~~L~~~gi~y~~idi~~d~~~~~~~-----~~~~~G~~tVP~I~i~Dg~-~l~~~-~~~el~~~L~el~ 83 (92)
T 2lqo_A 18 LRLKTALTANRIAYDEVDIEHNRAAAEFV-----GSVNGGNRTVPTVKFADGS-TLTNP-SADEVKAKLVKIA 83 (92)
T ss_dssp HHHHHHHHHTTCCCEEEETTTCHHHHHHH-----HHHSSSSSCSCEEEETTSC-EEESC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCceEEEEcCCCHHHHHHH-----HHHcCCCCEeCEEEEeCCE-EEeCC-CHHHHHHHHHHhc
Confidence 45677888889876655343 33222211 1123488999999995 55 45554 6788888888764
No 148
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=94.79 E-value=0.93 Score=34.36 Aligned_cols=44 Identities=0% Similarity=-0.148 Sum_probs=33.4
Q ss_pred ccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 8 SAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 8 ~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..-..++.|..|+-.-||.|-...+.|.++.++|++ .++.|.-.
T Consensus 43 ~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~-~g~~vv~v 86 (208)
T 2f8a_A 43 GSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGP-RGLVVLGF 86 (208)
T ss_dssp GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEE
T ss_pred HHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccC-CCeEEEEE
Confidence 333456778888889999999989999999998874 34666543
No 149
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.64 E-value=0.084 Score=38.11 Aligned_cols=41 Identities=22% Similarity=0.397 Sum_probs=31.7
Q ss_pred HHHHHHHhCCCCeecEEEE---CCe--eeecCCC--CHHHHHHHHHHHh
Q 027910 175 HEELKKYSANISGVPHFVL---NGK--HELSGGQ--PPEVYLRAFQVAA 216 (217)
Q Consensus 175 ~~~~~a~~~gv~g~Pt~vv---~g~--~~~~G~~--~~~~l~~~i~~~~ 216 (217)
.+.+.+...||.|+||++| +|+ +.+ |.. +.+.|.+.|+++.
T Consensus 104 ~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 104 KNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 3455677899999999977 465 234 888 8999999998764
No 150
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=94.64 E-value=0.11 Score=34.78 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=22.0
Q ss_pred hCCCCeecEEEECC-eeeecCCCCHHHHHHHH
Q 027910 182 SANISGVPHFVLNG-KHELSGGQPPEVYLRAF 212 (217)
Q Consensus 182 ~~gv~g~Pt~vv~g-~~~~~G~~~~~~l~~~i 212 (217)
..|..++|+++|+| + .+.|. +.+.|.++|
T Consensus 72 ~~g~~~vP~l~i~~~~-~igg~-~~~~l~~~L 101 (103)
T 3nzn_A 72 FNPSVSFPTTIINDEK-AIVGF-KEKEIRESL 101 (103)
T ss_dssp HCTTCCSCEEEETTTE-EEESC-CHHHHHHHT
T ss_pred hCCCCccCEEEECCCE-EEEcC-CHHHHHHHh
Confidence 35899999999998 6 45555 667777665
No 151
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=94.58 E-value=0.069 Score=35.24 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=28.8
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+...|+.++||+++ +|+. .+.|. +.+.+.+.|+++
T Consensus 65 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 65 VASESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp HHHHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 356779999999988 7763 35788 999999998875
No 152
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=94.58 E-value=0.73 Score=33.58 Aligned_cols=46 Identities=22% Similarity=0.048 Sum_probs=33.2
Q ss_pred CcccCCcceEEEEEecccCc-hhhhhHHHHHHHHHhcCCC-CceeEEE
Q 027910 6 SSSAGKKLIRIDVSSDTVCP-WCFVGKRNLDKAIASSKDQ-YDFEIRW 51 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP-~cy~~~~~l~~~~~~~~~~-~~v~v~~ 51 (217)
+...-..++.|.+|+-.-|| .|-...+.|.++.++|... .++++..
T Consensus 22 ~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~ 69 (170)
T 3me7_A 22 QLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVIT 69 (170)
T ss_dssp EGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEE
T ss_pred chHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEE
Confidence 33333456788888889998 5999999999999888632 2455554
No 153
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.56 E-value=0.038 Score=37.13 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=27.0
Q ss_pred HHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHHH
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~~ 215 (217)
+.+.| .++|++++||+....|..+.+.|.+.|++.
T Consensus 60 ~~~~g-~~vP~l~~~g~~~~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 60 YERYK-FDIPVFHLNGQFLMMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp HHHSS-SSCSEEEESSSEEEESSCCHHHHHHHHHSS
T ss_pred HHHHC-CCCCEEEECCEEEEecCCCHHHHHHHHHHH
Confidence 44678 899999999985435556888899888754
No 154
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=94.53 E-value=0.027 Score=39.22 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=30.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 456789999999988 7863 3689999999999987653
No 155
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=94.51 E-value=0.055 Score=34.53 Aligned_cols=36 Identities=19% Similarity=0.469 Sum_probs=28.0
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
|+|.+|+-..||+|..+.+.|.++.++++ ++.+...
T Consensus 1 m~v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~v 36 (85)
T 1ego_A 1 MQTVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYV 36 (85)
T ss_dssp CEEEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEE
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEE
Confidence 47889999999999999999988776543 3555443
No 156
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=94.47 E-value=0.069 Score=35.13 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=27.9
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.| .+.+.|.+.|+++
T Consensus 64 ~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 64 AAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHcCCccccEEEEEeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 455789999999988 7763 3468 4788999998875
No 157
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=94.46 E-value=0.065 Score=35.41 Aligned_cols=32 Identities=13% Similarity=-0.049 Sum_probs=26.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..+.+|+...||+|....+.+.++.++|.
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 50 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA 50 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC
Confidence 45677888888999999999999988877664
No 158
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.46 E-value=0.074 Score=37.32 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=31.4
Q ss_pred HHHHhCCCCeecEEEE--CCe-eeecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NGK-HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~-~~~~G~~~~~~l~~~i~~~~ 216 (217)
..+.+.||.++||+++ +|+ ..+.|..+.+.|.+.|++..
T Consensus 82 ~~~~~~~v~~~Pt~~~~~~G~~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 82 MLASKFDVSGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHHHH
T ss_pred HHHHHCCCCccCeEEEEECCcEEEcCCCCCHHHHHHHHHHhc
Confidence 3566789999999988 786 23478899999999998764
No 159
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=94.37 E-value=0.05 Score=37.14 Aligned_cols=35 Identities=20% Similarity=0.490 Sum_probs=27.7
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~ 214 (217)
.+.+.|+.++||+++ +|+. .+.|.. .+.|.+.|++
T Consensus 75 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 75 IAKECEVTAMPTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HHHHTTCCSBSEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred HHHHCCCCcccEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 456789999999988 7873 357888 8888888864
No 160
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=94.31 E-value=0.032 Score=37.78 Aligned_cols=37 Identities=16% Similarity=0.341 Sum_probs=29.1
Q ss_pred HHhCCCCeecEEEE--CCe----eeecCCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~----~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.|+.++||+++ +|+ ..+.|..+.+.|.+.|++..
T Consensus 74 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 74 AQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp HHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred HHHCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 34568999999988 775 34578889999999988653
No 161
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=94.24 E-value=0.083 Score=35.86 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=27.8
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.|+||+++ +|+. .+.| ...+.|.+.|+++
T Consensus 77 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 77 TARKYNISAMPTFIAIKNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHcCCCccceEEEEeCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 456789999999988 7863 3468 4788899888765
No 162
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=94.17 E-value=0.044 Score=44.49 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=30.8
Q ss_pred HHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHH
Q 027910 177 ELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 213 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~ 213 (217)
.+.+.+.||.|+||+++||+ .+.|.++.++|.+.+.
T Consensus 241 ~~la~~~gI~~vPT~~i~G~-~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 241 AQECTEAGITSYPTWIINGR-TYTGVRSLEALAVASG 276 (291)
T ss_dssp CHHHHTTTCCSTTEEEETTE-EEESCCCHHHHHHHTC
T ss_pred HHHHHHcCCcccCeEEECCE-EecCCCCHHHHHHHHC
Confidence 45577899999999999998 5899999999987653
No 163
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.16 E-value=0.021 Score=37.60 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=26.8
Q ss_pred HHHhCCCCeecEEE-ECCeeeecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFV-LNGKHELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~v-v~g~~~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+. +||++ +||+. +.|..+.+.|.+.|++.
T Consensus 40 l~~~~g~~-vPtl~~~~G~~-v~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 40 LESAYGLR-VPVLRDPMGRE-LDWPFDAPRLRAWLDAA 75 (87)
T ss_dssp HHHHHTTT-CSEEECTTCCE-EESCCCHHHHHHHHHTC
T ss_pred HHHHhCCC-cCeEEEECCEE-EeCCCCHHHHHHHHHHH
Confidence 34456887 99999 78884 45888999999988753
No 164
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=94.15 E-value=0.032 Score=38.05 Aligned_cols=37 Identities=16% Similarity=0.408 Sum_probs=29.3
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|+++
T Consensus 76 ~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 76 TARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred HHHhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHH
Confidence 456789999999988 7863 357999999998887653
No 165
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=94.01 E-value=0.11 Score=36.41 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=29.3
Q ss_pred HHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
..+.+.||.|+||+++ +|+. .+.|. ..+.|.+.|+++.
T Consensus 90 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 90 DFSASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp HHHHHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHh
Confidence 4567789999999987 6763 35688 7889999888653
No 166
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=93.93 E-value=0.097 Score=36.75 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=28.8
Q ss_pred HHHhCCCCeecEEEE----CCe--e--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL----NGK--H--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv----~g~--~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.||.|+||+++ +|+ . .+.|. +.+.|.+.|+++.
T Consensus 84 l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 84 LNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred HHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 456789999999976 776 2 35688 7899999998753
No 167
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=93.86 E-value=0.064 Score=34.07 Aligned_cols=36 Identities=14% Similarity=0.334 Sum_probs=27.0
Q ss_pred EEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
++.+|+-+.||+|..+.+.+.++++ +.++.+++.-+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~----~~~~~~~~~~v 38 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAID----PSKYTVEIVHL 38 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSC----TTTEEEEEEET
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHH----hcCCeEEEEEe
Confidence 5788999999999999998887765 34556554433
No 168
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.84 E-value=0.38 Score=33.91 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=24.0
Q ss_pred EEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~--------~gi~y~~~di~ 34 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE--------HEIPFVERNIF 34 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH--------TTCCEEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHH--------cCCceEEEEcc
Confidence 788999999999987776653 35666666554
No 169
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=93.62 E-value=0.2 Score=35.11 Aligned_cols=42 Identities=17% Similarity=0.046 Sum_probs=33.0
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..+..|.+|+..-||.|-...+.|.++.++|+...++.+...
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i 68 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLI 68 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEE
Confidence 456778888889999999999999999998874345666544
No 170
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=93.61 E-value=0.077 Score=35.77 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHH
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVY 208 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l 208 (217)
.+..+..+.|++-....++.. ..+.+.. ....|..++|++++||+ .+.|......+
T Consensus 37 ~~~~~L~~~~i~~~~vdi~~~---~~~~~~l--~~~~g~~~vP~v~i~g~-~igg~d~~~~l 92 (105)
T 2yan_A 37 QILEILNSTGVEYETFDILED---EEVRQGL--KAYSNWPTYPQLYVKGE-LVGGLDIVKEL 92 (105)
T ss_dssp HHHHHHHHHTCCCEEEEGGGC---HHHHHHH--HHHHTCCSSCEEEETTE-EEECHHHHHHH
T ss_pred HHHHHHHHCCCCeEEEECCCC---HHHHHHH--HHHHCCCCCCeEEECCE-EEeChHHHHHH
Confidence 344455556676544433221 1222222 22348899999999999 56776544333
No 171
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=93.59 E-value=0.094 Score=33.10 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=29.1
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
.+..+..+.|++-....++.. ...... .....|+.++|++++||+ .+.|..
T Consensus 16 ~~~~~l~~~~i~~~~~~i~~~---~~~~~~--~~~~~~~~~vP~l~~~g~-~i~g~~ 66 (82)
T 1fov_A 16 RAKALLSSKGVSFQELPIDGN---AAKREE--MIKRSGRTTVPQIFIDAQ-HIGGYD 66 (82)
T ss_dssp HHHHHHHHHTCCCEEEECTTC---SHHHHH--HHHHHSSCCSCEEEETTE-EEESHH
T ss_pred HHHHHHHHCCCCcEEEECCCC---HHHHHH--HHHHhCCCCcCEEEECCE-EEeCHH
Confidence 344555566776554433321 111111 233458999999999998 566653
No 172
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.57 E-value=0.058 Score=37.23 Aligned_cols=37 Identities=11% Similarity=0.180 Sum_probs=30.2
Q ss_pred HHHhCCCCeecEEEE--CCee-eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~-~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 69 ~~~~~~v~~~Pt~~~~~~G~~~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 69 LSGRFIINALPTIYHCKDGEFRRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHTC
T ss_pred HHHHcCCcccCEEEEEeCCeEEEeecCCCHHHHHHHHHHH
Confidence 567899999999988 7772 357988999999998754
No 173
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=93.55 E-value=0.11 Score=32.98 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=22.8
Q ss_pred HHHhCC--CCeecEEEECCeeeecCCCCHHHHHHHHHH
Q 027910 179 KKYSAN--ISGVPHFVLNGKHELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 179 ~a~~~g--v~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~ 214 (217)
.+...| +.++|++++||+ .+.|. +++.+.+++
T Consensus 48 l~~~~~~~~~~vP~i~~~g~-~i~~~---~~l~~~~~~ 81 (85)
T 1ego_A 48 LQQKAGKPVETVPQIFVDQQ-HIGGY---TDFAAWVKE 81 (85)
T ss_dssp HHHHTCCCSCCSCEEEETTE-EEESS---HHHHHHHHH
T ss_pred HHHHhCCCCceeCeEEECCE-EEECH---HHHHHHHHH
Confidence 344556 999999999998 56665 566666654
No 174
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.55 E-value=0.091 Score=33.72 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=30.5
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCC-----CeecEEEECCeeeecCCCCHHH
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANI-----SGVPHFVLNGKHELSGGQPPEV 207 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv-----~g~Pt~vv~g~~~~~G~~~~~~ 207 (217)
.+..++++.|++-+...++..+-. ... .+.....|. .++|++++||+ .+.|......
T Consensus 19 ~~~~~L~~~~i~~~~~~vd~~~~~-~~~--~el~~~~g~~~~~~~~vP~i~i~g~-~i~g~~~i~~ 80 (89)
T 3msz_A 19 WAKQWFEENNIAFDETIIDDYAQR-SKF--YDEMNQSGKVIFPISTVPQIFIDDE-HIGGFTELKA 80 (89)
T ss_dssp HHHHHHHHTTCCCEEEECCSHHHH-HHH--HHHHHTTTCCSSCCCSSCEEEETTE-EEESHHHHHH
T ss_pred HHHHHHHHcCCCceEEEeecCCCh-hHH--HHHHHHhCCCCCCCCccCEEEECCE-EEeChHHHHH
Confidence 345566677776443322211100 011 123344566 99999999998 5666644333
No 175
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=93.50 E-value=0.081 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=26.9
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.+..++|++|+-+.||+|-.+.+.|.++.+++
T Consensus 26 ~~~m~~vv~y~~~~C~~C~~a~~~L~~l~~e~ 57 (107)
T 2fgx_A 26 QVEPRKLVVYGREGCHLCEEMIASLRVLQKKS 57 (107)
T ss_dssp CCCCCCEEEEECSSCHHHHHHHHHHHHHHHHS
T ss_pred CCCccEEEEEeCCCChhHHHHHHHHHHHHHhc
Confidence 34456799999999999999999999887754
No 176
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.49 E-value=0.068 Score=35.84 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=29.5
Q ss_pred HHHHHHHcCCCcccccccCcccchhHHHHHHHHHhC-CCCeecEEEECCeeeecCCCCHH
Q 027910 148 LVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSA-NISGVPHFVLNGKHELSGGQPPE 206 (217)
Q Consensus 148 L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~-gv~g~Pt~vv~g~~~~~G~~~~~ 206 (217)
++.++++.|++-....++... ...+. ..... |..++|+++|||+ .+.|.....
T Consensus 32 ak~~L~~~~i~y~~idI~~~~---~~~~~--l~~~~~g~~~vP~ifi~g~-~igG~d~l~ 85 (99)
T 3qmx_A 32 ALALLKRKGVEFQEYCIDGDN---EAREA--MAARANGKRSLPQIFIDDQ-HIGGCDDIY 85 (99)
T ss_dssp HHHHHHHHTCCCEEEECTTCH---HHHHH--HHHHTTTCCCSCEEEETTE-EEESHHHHH
T ss_pred HHHHHHHCCCCCEEEEcCCCH---HHHHH--HHHHhCCCCCCCEEEECCE-EEeChHHHH
Confidence 344555567765544333221 11111 12233 8999999999998 567764433
No 177
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=93.47 E-value=0.14 Score=31.76 Aligned_cols=28 Identities=18% Similarity=0.385 Sum_probs=24.4
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
++|.+|.+ -||+|....+.+.++.+++.
T Consensus 2 ~~v~f~a~-wC~~C~~~~~~l~~~~~~~~ 29 (77)
T 1ilo_A 2 MKIQIYGT-GCANCQMLEKNAREAVKELG 29 (77)
T ss_dssp EEEEEECS-SSSTTHHHHHHHHHHHHHTT
T ss_pred cEEEEEcC-CChhHHHHHHHHHHHHHHcC
Confidence 57888886 99999999999999988775
No 178
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=93.46 E-value=0.18 Score=36.73 Aligned_cols=46 Identities=20% Similarity=0.108 Sum_probs=35.5
Q ss_pred ccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEee
Q 027910 8 SAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHP 53 (217)
Q Consensus 8 ~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p 53 (217)
..-..++.|.+|+-.-||.|....+.|.++.++|++..++.|....
T Consensus 44 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~ 89 (165)
T 3s9f_A 44 DSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILAS 89 (165)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred HHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 3334567788888899999999999999999999854566666543
No 179
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=93.39 E-value=0.15 Score=35.80 Aligned_cols=42 Identities=14% Similarity=0.036 Sum_probs=32.7
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+-.-||.|-...+.|.++.++|++..++.+...
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v 68 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLI 68 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEE
Confidence 446677777789999999999999999998874345666544
No 180
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=93.33 E-value=0.21 Score=32.80 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=27.1
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.| ...+.|.+.|+++
T Consensus 66 ~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 66 IAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred HHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 455778999999988 7763 3468 5778888888764
No 181
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=93.32 E-value=0.045 Score=36.72 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=26.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+..-||+|....+.+.++.++|+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 56 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP 56 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 45677888888999999999999988887664
No 182
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.20 E-value=0.11 Score=37.03 Aligned_cols=53 Identities=21% Similarity=0.176 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCcccccc-cCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCH
Q 027910 146 EFLVECARKVGVEGAAEFL-DDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 205 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l-~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~ 205 (217)
..++.++.+.|++-....+ .+++ +++.... ..|..++|.++|||+ .+.|.+..
T Consensus 54 ~~ak~~L~~~gv~y~~vdI~~d~~----~~~~L~~--~~G~~tvP~VfI~G~-~iGG~d~l 107 (135)
T 2wci_A 54 AQAVQALAACGERFAYVDILQNPD----IRAELPK--YANWPTFPQLWVDGE-LVGGCDIV 107 (135)
T ss_dssp HHHHHHHHTTCSCCEEEEGGGCHH----HHHHHHH--HHTCCSSCEEEETTE-EEESHHHH
T ss_pred HHHHHHHHHcCCceEEEECCCCHH----HHHHHHH--HHCCCCcCEEEECCE-EEEChHHH
Confidence 4455666677776555423 2332 2222222 237889999999999 57777544
No 183
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=93.14 E-value=2.2 Score=32.56 Aligned_cols=47 Identities=19% Similarity=0.080 Sum_probs=34.7
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEee
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHP 53 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p 53 (217)
++.+.=..++.|.+|+..-||.|. ..+.|.++.++|.+ .++.|.-.+
T Consensus 49 v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~-~g~~Vlgvs 95 (215)
T 2i3y_A 49 VSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKP-YGLVVLGFP 95 (215)
T ss_dssp EEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG-GTEEEEEEE
T ss_pred EcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc-CCeEEEEEE
Confidence 334444557888999999999998 88889999998874 356665433
No 184
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=93.09 E-value=0.17 Score=36.42 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=29.0
Q ss_pred HHHhCCCCeecEEEE--CCee-----------eecC-CCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH-----------ELSG-GQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~-----------~~~G-~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.| ..+.+.|.+.|+++
T Consensus 69 l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 69 YTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred HHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 356788999999987 5653 3568 88899999998876
No 185
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=93.08 E-value=0.11 Score=35.37 Aligned_cols=53 Identities=11% Similarity=0.128 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCcccccc-cCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCH
Q 027910 146 EFLVECARKVGVEGAAEFL-DDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 205 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l-~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~ 205 (217)
....++..+.|++-....+ .+++.++ .... ..|...+|.++|||+ .|.|.+..
T Consensus 37 ~~ak~~L~~~gi~~~~~dI~~~~~~~~----~l~~--~~g~~tvP~ifi~g~-~iGG~d~l 90 (109)
T 3ipz_A 37 NTVVQILKNLNVPFEDVNILENEMLRQ----GLKE--YSNWPTFPQLYIGGE-FFGGCDIT 90 (109)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGCHHHHH----HHHH--HHTCSSSCEEEETTE-EEECHHHH
T ss_pred HHHHHHHHHcCCCcEEEECCCCHHHHH----HHHH--HHCCCCCCeEEECCE-EEeCHHHH
Confidence 3455666677887655533 3333222 2222 237889999999998 56776543
No 186
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=93.05 E-value=0.14 Score=34.05 Aligned_cols=31 Identities=6% Similarity=-0.019 Sum_probs=25.0
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
..+..+..|+.+-||+|....+.+.++.++|
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~ 50 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY 50 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC
Confidence 3456777888889999999999888887765
No 187
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=93.02 E-value=2.2 Score=32.26 Aligned_cols=46 Identities=7% Similarity=-0.127 Sum_probs=34.0
Q ss_pred cCcccCCcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 5 VSSSAGKKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 5 ~~~~~~~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
++.+.=..++.|.+|+..-||.| ...+.|.++.++|.+ .++.|.-.
T Consensus 31 v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~-~g~~vlgv 76 (207)
T 2r37_A 31 IPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAP-FGLVILGF 76 (207)
T ss_dssp EEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGG-GTEEEEEE
T ss_pred EcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhcc-CCEEEEEE
Confidence 33444455788899999999999 778889999998874 35665533
No 188
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=92.97 E-value=0.25 Score=32.87 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=25.0
Q ss_pred HhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 181 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 181 ~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.|+.++||+++ +|+. .+.|. +.+.|.+.|+++.
T Consensus 73 ~~~~v~~~Pt~~~~~~G~~~~~~~g~-~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 73 EEWNVEAMPTFIFLKDGKLVDKTVGA-DKDGLPTLVAKHA 111 (113)
T ss_dssp HHHHCSSTTEEEEEETTEEEEEEECC-CTTHHHHHHHHHH
T ss_pred HhCCCCcccEEEEEeCCEEEEEEecC-CHHHHHHHHHHhh
Confidence 3457789999988 7763 34674 6788888887764
No 189
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=92.89 E-value=0.061 Score=34.58 Aligned_cols=23 Identities=17% Similarity=0.663 Sum_probs=19.0
Q ss_pred ceEEEEEecccCchhhhhHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~ 35 (217)
.++|.+|+.+.||+|..+...|.
T Consensus 3 ~m~v~ly~~~~Cp~C~~~~~~L~ 25 (89)
T 3msz_A 3 AMKVKIYTRNGCPYCVWAKQWFE 25 (89)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHH
T ss_pred ceEEEEEEcCCChhHHHHHHHHH
Confidence 36799999999999998776554
No 190
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=92.82 E-value=0.069 Score=35.46 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=25.2
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
..-.|++|+-+.||||..+...|.+ .++.+++..+
T Consensus 2 ~ta~I~vYs~~~Cp~C~~aK~~L~~--------~gi~y~~idi 36 (92)
T 2lqo_A 2 VTAALTIYTTSWCGYCLRLKTALTA--------NRIAYDEVDI 36 (92)
T ss_dssp CSSCEEEEECTTCSSHHHHHHHHHH--------TTCCCEEEET
T ss_pred CCCcEEEEcCCCCHhHHHHHHHHHh--------cCCceEEEEc
Confidence 3456899999999999997776643 2566665544
No 191
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.81 E-value=0.21 Score=34.56 Aligned_cols=39 Identities=18% Similarity=-0.014 Sum_probs=30.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+..|..|+.+-||+|....+.+.++.++|....++.+.
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~ 63 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIA 63 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 567788888999999999999999998888643334443
No 192
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=91.95 E-value=0.02 Score=37.86 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=28.6
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.|+.++||+++ +|+. .+.|..+.+.|.+.|+++
T Consensus 65 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 65 TAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 456789999999988 6763 246888888888888764
No 193
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=92.74 E-value=0.2 Score=34.57 Aligned_cols=38 Identities=16% Similarity=0.016 Sum_probs=29.8
Q ss_pred HHHHhCCCCeecEEEE--CCe----eeecCCCCHHHHHHHHHHH
Q 027910 178 LKKYSANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~----~~~~G~~~~~~l~~~i~~~ 215 (217)
+.+.+.||.|+||+++ +|+ ..+.|..+.+.|.+.|++.
T Consensus 83 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 83 DVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred hHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 3567789999999977 332 3567999999999998764
No 194
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=92.68 E-value=0.1 Score=36.14 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=18.6
Q ss_pred HHhCCCCeecEEEECCeeeecCCCC
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQP 204 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~~ 204 (217)
+...|+.++|+++++|+ .+.|...
T Consensus 75 ~~~~g~~tvP~vfi~g~-~igG~d~ 98 (118)
T 3c1r_A 75 YEINGQRTVPNIYINGK-HIGGNDD 98 (118)
T ss_dssp HHHHSCCSSCEEEETTE-EEESHHH
T ss_pred HHHhCCCCcCEEEECCE-EEEcHHH
Confidence 34568999999999999 5677643
No 195
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.64 E-value=0.17 Score=34.86 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=29.0
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 75 l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 75 LASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDL 115 (133)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred HHHhCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHH
Confidence 455678999999988 5652 357988999999988765
No 196
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=92.45 E-value=0.75 Score=36.73 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCCCee--cEEEECCeeeecCCCCHHHHHHHHHHH
Q 027910 174 VHEELKKYSANISGV--PHFVLNGKHELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 174 ~~~~~~a~~~gv~g~--Pt~vv~g~~~~~G~~~~~~l~~~i~~~ 215 (217)
.++...+...|..++ |.++|||+..+.|. +.+.|.++|.+.
T Consensus 99 ~r~~~~~~~~G~~tVyTPqI~Ing~~~v~G~-d~~~l~~~l~~~ 141 (270)
T 2axo_A 99 ERQYGYMRALGRNGVYTPQAILNGRDHVKGA-DVRGIYDRLDAF 141 (270)
T ss_dssp HHHHHHHHHTTCSCCCSSEEEETTTEEEETT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccCCEEEECCEEeecCC-CHHHHHHHHHHh
Confidence 334446667899888 99999999546676 578888888754
No 197
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=92.42 E-value=0.32 Score=32.30 Aligned_cols=23 Identities=13% Similarity=0.241 Sum_probs=17.7
Q ss_pred HHhCCCCeecEEEECCeeeecCCC
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
+...|+.++|+++++|+ .+.|..
T Consensus 61 ~~~~g~~~vP~i~~~g~-~i~g~~ 83 (105)
T 1kte_A 61 QQLTGARTVPRVFIGKE-CIGGCT 83 (105)
T ss_dssp HHHHSCCCSCEEEETTE-EEESHH
T ss_pred HHHhCCCCcCeEEECCE-EEeccH
Confidence 34568999999999998 466653
No 198
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=92.35 E-value=0.29 Score=34.44 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=32.6
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+-.-||.|-...+.|.++.++|++..++.+...
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v 68 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFC 68 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEE
Confidence 345677777779999999999999999998874345666554
No 199
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.32 E-value=0.28 Score=33.49 Aligned_cols=60 Identities=20% Similarity=0.142 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHHH
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVY 208 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l 208 (217)
.....+..+.|++-....++..+-...+.+.. ....|...+|+++|||+ .+.|......+
T Consensus 31 ~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l--~~~~g~~tvP~vfi~g~-~igG~d~l~~l 90 (114)
T 3h8q_A 31 TRVKELFSSLGVECNVLELDQVDDGARVQEVL--SEITNQKTVPNIFVNKV-HVGGCDQTFQA 90 (114)
T ss_dssp HHHHHHHHHTTCCCEEEETTTSTTHHHHHHHH--HHHHSCCSSCEEEETTE-EEESHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEecCCCChHHHHHHH--HHHhCCCccCEEEECCE-EEeCHHHHHHH
Confidence 34555666677765544333211112232222 23357899999999998 57777544433
No 200
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=92.32 E-value=0.29 Score=31.96 Aligned_cols=38 Identities=11% Similarity=-0.016 Sum_probs=29.8
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..+.+|+..-||+|....+.+.++.++++ ++.+..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~ 55 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAK 55 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEE
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEE
Confidence 45667777888999999999999999988775 355543
No 201
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=92.28 E-value=0.24 Score=33.45 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=29.9
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+..|.+|+..-||+|....+.+.++.++|+. ++.+.
T Consensus 30 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~ 66 (121)
T 2i1u_A 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVA 66 (121)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEE
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEE
Confidence 45678888889999999999999999888764 34444
No 202
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.27 E-value=0.26 Score=33.88 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=27.9
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..|.+|+.+-||+|....+.+.++.++|++
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~ 66 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKD 66 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC
Confidence 46778888889999999999999999888764
No 203
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=92.23 E-value=0.18 Score=32.53 Aligned_cols=51 Identities=12% Similarity=0.009 Sum_probs=29.4
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhC-CCCeecEEEECCeeeecCCCCH
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSA-NISGVPHFVLNGKHELSGGQPP 205 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~-gv~g~Pt~vv~g~~~~~G~~~~ 205 (217)
.+..+.++.|++-....++ + ... .+..... |+.++|++++||+ .+.|....
T Consensus 21 ~~~~~L~~~~i~~~~vdv~-~----~~~--~~l~~~~~~~~~vP~l~~~g~-~i~g~~~i 72 (89)
T 2klx_A 21 RARDLLDKKGVKYTDIDAS-T----SLR--QEMVQRANGRNTFPQIFIGDY-HVGGCDDL 72 (89)
T ss_dssp HHHHHHHHHTCCEEEECSC-H----HHH--HHHHHHHHSSCCSCEEEETTE-ECCSHHHH
T ss_pred HHHHHHHHcCCCcEEEECC-H----HHH--HHHHHHhCCCCCcCEEEECCE-EEeChHHH
Confidence 4455666667754433332 1 111 1223345 8999999999998 56666443
No 204
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=92.22 E-value=0.16 Score=33.31 Aligned_cols=32 Identities=16% Similarity=0.019 Sum_probs=27.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..+.+|+..-||+|....+.+.++.++|+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 50 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS 50 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc
Confidence 45677888888999999999999999988876
No 205
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=92.18 E-value=0.95 Score=34.44 Aligned_cols=40 Identities=18% Similarity=-0.000 Sum_probs=29.8
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+ -.-||.|-...+.|.++.++|.+ .+++|..
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~ 91 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE-RNVELLG 91 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH-TTEEEEE
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 3456677776 88999999999999998888852 3566543
No 206
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=92.14 E-value=0.13 Score=36.32 Aligned_cols=55 Identities=18% Similarity=0.229 Sum_probs=30.6
Q ss_pred HHHHHHcC---CCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHH
Q 027910 149 VECARKVG---VEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPE 206 (217)
Q Consensus 149 ~~ia~~~G---ld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~ 206 (217)
..+..+.| ++...+.++..+-...+.+. .....|..++|+++|||+ .+.|..+..
T Consensus 55 k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~--L~~~~g~~tVP~vfi~g~-~igG~d~l~ 112 (129)
T 3ctg_A 55 STLFQELNVPKSKALVLELDEMSNGSEIQDA--LEEISGQKTVPNVYINGK-HIGGNSDLE 112 (129)
T ss_dssp HHHHTTSCCCGGGEEEEEGGGSTTHHHHHHH--HHHHHSCCSSCEEEETTE-EEESHHHHH
T ss_pred HHHHHhcCccCCCcEEEEccccCCHHHHHHH--HHHHhCCCCCCEEEECCE-EEcCHHHHH
Confidence 56666666 44433333322211122222 233458899999999999 567765433
No 207
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=92.13 E-value=0.28 Score=33.25 Aligned_cols=37 Identities=11% Similarity=-0.058 Sum_probs=29.7
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+..|.+|+.+-||+|....+.+.++.++|++ ++.+.
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~ 57 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAG 57 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEE
Confidence 45678888889999999999999999888864 34443
No 208
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=92.09 E-value=0.078 Score=33.63 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=21.4
Q ss_pred HHHHhCCCCeecEEEECCeeeecCCC-CHHHH
Q 027910 178 LKKYSANISGVPHFVLNGKHELSGGQ-PPEVY 208 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv~g~~~~~G~~-~~~~l 208 (217)
+.+.+.|+.++||+++||+....|.. +.+.|
T Consensus 46 ~~~~~~gv~~vPt~~i~g~~~~~G~~~~~~~l 77 (80)
T 2k8s_A 46 AEAEKAGVKSVPALVIDGAAFHINFGAGIDDL 77 (80)
T ss_dssp HHHHHHTCCEEEEEEETTEEEEEEEEEEHHHH
T ss_pred HHHHHcCCCcCCEEEECCEEEEeccCcCHHHh
Confidence 34556799999999999984445543 34444
No 209
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.05 E-value=0.18 Score=34.51 Aligned_cols=54 Identities=13% Similarity=0.085 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCccccccc-CcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHH
Q 027910 146 EFLVECARKVGVEGAAEFLD-DPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPE 206 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~-~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~ 206 (217)
...+++..+.|++-....+. +++. ++.... ..|...+|.++|||+ .+.|.+...
T Consensus 35 ~~ak~~L~~~gi~y~~~di~~d~~~----~~~l~~--~~g~~tvP~ifi~g~-~iGG~d~l~ 89 (111)
T 3zyw_A 35 KQMVEILHKHNIQFSSFDIFSDEEV----RQGLKA--YSSWPTYPQLYVSGE-LIGGLDIIK 89 (111)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGCHHH----HHHHHH--HHTCCSSCEEEETTE-EEECHHHHH
T ss_pred HHHHHHHHHcCCCeEEEECcCCHHH----HHHHHH--HHCCCCCCEEEECCE-EEecHHHHH
Confidence 34455666778775555332 3322 222222 227788999999998 567765433
No 210
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=91.25 E-value=0.028 Score=39.04 Aligned_cols=39 Identities=23% Similarity=0.471 Sum_probs=29.5
Q ss_pred HHHHhCCCCeecEEEE----CCee----eecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL----NGKH----ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv----~g~~----~~~G~~~~~~l~~~i~~~~ 216 (217)
..+...||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 69 ~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 69 ELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 3456789999999977 3663 2578888889988887653
No 211
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.89 E-value=0.13 Score=33.72 Aligned_cols=56 Identities=7% Similarity=-0.141 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCC--CCeecEEEECCeeeecCCCCHHH
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSAN--ISGVPHFVLNGKHELSGGQPPEV 207 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~g--v~g~Pt~vv~g~~~~~G~~~~~~ 207 (217)
....++..+.|++-+...++.. ...++.. ....| ...+|.++|||+ .+.|......
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~~---~~~~~~l--~~~~g~~~~~vP~ifi~g~-~igG~d~l~~ 79 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQD---NALRDEM--RTLAGNPKATPPQIVNGNH-YCGDYELFVE 79 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTSC---HHHHHHH--HHHTTCTTCCSCEEEETTE-EEEEHHHHHH
T ss_pred HHHHHHHHHCCCceEEEECCCC---HHHHHHH--HHHhCCCCCCCCEEEECCE-EEeCHHHHHH
Confidence 4566677788887665534322 1222222 22346 779999999999 4677644433
No 212
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=91.82 E-value=0.2 Score=33.54 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=28.9
Q ss_pred HHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHH
Q 027910 178 LKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
..+.+.||.|+||+++ +|+. .+.|. ..+.|.+.|++.
T Consensus 68 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 68 DVAQKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 3567789999999988 7763 34688 669999999875
No 213
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=91.75 E-value=0.14 Score=34.78 Aligned_cols=52 Identities=17% Similarity=0.132 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCccccccc-CcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC
Q 027910 145 KEFLVECARKVGVEGAAEFLD-DPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 145 ~~~L~~ia~~~Gld~~~~~l~-~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
=..+..++.+.|++-....++ +++ +.+... ...|..++|+++|||+ .+.|..
T Consensus 33 C~~ak~~L~~~~i~~~~vdi~~~~~----~~~~l~--~~~g~~~vP~ifi~g~-~igG~d 85 (109)
T 1wik_A 33 SKQILEILNSTGVEYETFDILEDEE----VRQGLK--TFSNWPTYPQLYVRGD-LVGGLD 85 (109)
T ss_dssp HHHHHHHHHHTCSCEEEEESSSCHH----HHHHHH--HHHSCCSSCEEECSSS-EEECHH
T ss_pred HHHHHHHHHHcCCCeEEEECCCCHH----HHHHHH--HHhCCCCCCEEEECCE-EEcCHH
Confidence 345666777778875555333 222 222222 2347889999999998 467764
No 214
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=91.71 E-value=0.13 Score=33.30 Aligned_cols=22 Identities=32% Similarity=0.618 Sum_probs=18.2
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+|.+|+.+.||+|..+.+.|.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~ 28 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDK 28 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHH
Confidence 5778999999999998776654
No 215
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=91.56 E-value=0.38 Score=32.57 Aligned_cols=31 Identities=19% Similarity=0.058 Sum_probs=27.2
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|.+|+.+-||+|....+.+.++.++|+
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~ 60 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYP 60 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
Confidence 3577888889999999999999999988876
No 216
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=91.51 E-value=0.43 Score=34.08 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=31.1
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..+..|.+|+..-||.|-...+.|.++.++|++ .++.+.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v 78 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK-GDLVVL 78 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST-TSEEEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc-CCeEEE
Confidence 446778888899999999999999999998873 345544
No 217
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=91.27 E-value=0.37 Score=32.55 Aligned_cols=33 Identities=9% Similarity=-0.083 Sum_probs=27.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..+..|+.+-||+|....+.+.++.++|+.
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~ 56 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAK 56 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhh
Confidence 446677788889999999999999999888864
No 218
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.11 E-value=0.29 Score=33.63 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=28.9
Q ss_pred HHHHhCCCCeecEEEE---CCe--eeecCCCCHHHHHHHHHHH
Q 027910 178 LKKYSANISGVPHFVL---NGK--HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv---~g~--~~~~G~~~~~~l~~~i~~~ 215 (217)
..+.+.||.++||+++ +|+ ..+.|..+.+.|.+.|.+.
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 80 SLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp HHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred HHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 4567789999999988 232 3457988999998888754
No 219
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=91.11 E-value=0.47 Score=31.33 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=26.3
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.|+.++||+++ +|+. .+.|..+ +.|.+.|++..
T Consensus 66 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~-~~l~~~l~~~l 106 (107)
T 1gh2_A 66 TAATNNISATPTFQFFRNKVRIDQYQGADA-VGLEEKIKQHL 106 (107)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred HHHhcCCCcccEEEEEECCeEEEEEeCCCH-HHHHHHHHHhc
Confidence 456789999999977 6762 3568654 55888887653
No 220
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=90.87 E-value=0.39 Score=30.89 Aligned_cols=56 Identities=9% Similarity=-0.029 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCCcccccccCcc--cchhHHHHHHHHHhCCCC-----eecEEEE-CCeeeecCCCC
Q 027910 146 EFLVECARKVGVEGAAEFLDDPN--SGLNEVHEELKKYSANIS-----GVPHFVL-NGKHELSGGQP 204 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~--~~~~~~~~~~~a~~~gv~-----g~Pt~vv-~g~~~~~G~~~ 204 (217)
...+.++.+.|++-+...++..+ ......+... ...|.. ++|+++| ||+ .+.|.+.
T Consensus 18 ~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~--~~~g~~~~~~~tvP~v~i~~g~-~igG~d~ 81 (87)
T 1aba_A 18 DNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELL--TKLGRDTQIGLTMPQVFAPDGS-HIGGFDQ 81 (87)
T ss_dssp HHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHH--HHHTCSCCTTCCSCEEECTTSC-EEESHHH
T ss_pred HHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHH--HHhCCCCCCCCccCEEEEECCE-EEeCHHH
Confidence 34566777888876655333110 1122333332 233666 8999999 998 5677643
No 221
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=90.81 E-value=0.078 Score=35.99 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=22.5
Q ss_pred HHhCCCCeecEEEECCeeeecCCC------CHHHHHHHHHH
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQ------PPEVYLRAFQV 214 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~------~~~~l~~~i~~ 214 (217)
+...|+.++||++++|+ .+.|.. +.+.|.+.|++
T Consensus 66 ~~~~~v~~~Pt~~~~g~-~v~~~~~~~~~~~~~~l~~~l~~ 105 (116)
T 2e7p_A 66 AHWTGRGTVPNVFIGGK-QIGGCDTVVEKHQRNELLPLLQD 105 (116)
T ss_dssp HHHHSCCSSCEEEETTE-EEECHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCCCcCEEEECCE-EECChHHHHHHHhCChHHHHHHH
Confidence 44678999999999998 344432 33356666654
No 222
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=90.75 E-value=0.24 Score=39.58 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=25.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHh
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIAS 40 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~ 40 (217)
.+++.|++|+...||||-.+...|.++..+
T Consensus 41 ~~~~~VelyTs~gCp~C~~Ak~lL~~~~~~ 70 (270)
T 2axo_A 41 AVKGVVELFTSQGCASCPPADEALRKMIQK 70 (270)
T ss_dssp CCCCEEEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCChHHHHHHHHHhhcc
Confidence 445899999999999999999999887654
No 223
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=90.69 E-value=0.19 Score=32.57 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=17.3
Q ss_pred EEEEEecccCchhhhhHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~ 35 (217)
+|.+|+.+.||+|..+...|.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~ 27 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLA 27 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHH
T ss_pred cEEEEECCCChhHHHHHHHHH
Confidence 577899999999998776654
No 224
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=90.66 E-value=0.18 Score=36.84 Aligned_cols=37 Identities=16% Similarity=0.260 Sum_probs=28.1
Q ss_pred HHhCCCCeecEEEE---CCee--eecCCCC-HHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL---NGKH--ELSGGQP-PEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv---~g~~--~~~G~~~-~~~l~~~i~~~~ 216 (217)
+...||.|+||+++ +|+. ...|..+ .+.|.+.|+++.
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 46789999999866 4652 3469888 999888887653
No 225
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=90.63 E-value=0.29 Score=33.96 Aligned_cols=53 Identities=26% Similarity=0.237 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCC-ccccccc-CcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCH
Q 027910 146 EFLVECARKVGVE-GAAEFLD-DPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 205 (217)
Q Consensus 146 ~~L~~ia~~~Gld-~~~~~l~-~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~ 205 (217)
...+++..+.|++ .....++ +++ +++.... ..|...+|.++|||+ .|.|.+..
T Consensus 39 ~~ak~lL~~~gv~~~~~vdV~~d~~----~~~~l~~--~tg~~tvP~vfI~g~-~IGG~d~l 93 (118)
T 2wem_A 39 NAVVQILRLHGVRDYAAYNVLDDPE----LRQGIKD--YSNWPTIPQVYLNGE-FVGGCDIL 93 (118)
T ss_dssp HHHHHHHHHTTCCCCEEEESSSCHH----HHHHHHH--HHTCCSSCEEEETTE-EEESHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEcCCCHH----HHHHHHH--HhCCCCcCeEEECCE-EEeChHHH
Confidence 4566677778884 5554333 333 2222222 227788999999999 56777543
No 226
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=90.62 E-value=0.33 Score=37.14 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.5
Q ss_pred HhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 181 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 181 ~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 78 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 78 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp GGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 4568999999988 7763 4579999999999998764
No 227
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=90.54 E-value=0.26 Score=31.90 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=28.5
Q ss_pred HHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCC
Q 027910 148 LVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 204 (217)
Q Consensus 148 L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~ 204 (217)
+..+.++.|++-....++.. ....++ .....|+.++|++++||+ .+.|...
T Consensus 22 ~~~~L~~~~i~~~~~di~~~---~~~~~~--l~~~~~~~~vP~l~~~g~-~i~g~~~ 72 (92)
T 2khp_A 22 AKALLARKGAEFNEIDASAT---PELRAE--MQERSGRNTFPQIFIGSV-HVGGCDD 72 (92)
T ss_dssp HHHHHHHTTCCCEEEESTTS---HHHHHH--HHHHHTSSCCCEEEETTE-EEESHHH
T ss_pred HHHHHHHcCCCcEEEECCCC---HHHHHH--HHHHhCCCCcCEEEECCE-EEcCHHH
Confidence 44455566776544433321 112221 223458899999999998 5666643
No 228
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=90.45 E-value=0.5 Score=33.97 Aligned_cols=55 Identities=16% Similarity=0.098 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
..+..++++.|++-..+.++..+-...+. ...+...|+.++|++++||+ .+.|..
T Consensus 63 ~~~k~~L~~~~i~~~~vdId~~~~~~~~~--~~L~~~~g~~tvP~ifi~G~-~igG~d 117 (146)
T 2ht9_A 63 TMAKKLFHDMNVNYKVVELDLLEYGNQFQ--DALYKMTGERTVPRIFVNGT-FIGGAT 117 (146)
T ss_dssp HHHHHHHHHHTCCCEEEEGGGCTTHHHHH--HHHHHHHSCCCSCEEEETTE-EEESHH
T ss_pred HHHHHHHHHcCCCeEEEECccCcCCHHHH--HHHHHHhCCCCcCeEEECCE-EEeCch
Confidence 34555666677765443333221111121 12345568999999999998 566654
No 229
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=90.25 E-value=0.18 Score=31.10 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=18.7
Q ss_pred eEEEEEecccCchhhhhHHHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
|+|.+|+...||+|..+.+.|.+
T Consensus 1 m~i~~y~~~~C~~C~~~~~~l~~ 23 (75)
T 1r7h_A 1 MSITLYTKPACVQCTATKKALDR 23 (75)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHH
T ss_pred CeEEEEeCCCChHHHHHHHHHHH
Confidence 35788999999999987776653
No 230
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=90.23 E-value=0.34 Score=32.97 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=17.8
Q ss_pred HHhCCCCeecEEEECCeeeecCCC
Q 027910 180 KYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 180 a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
+...|+.++|++++||+ .+.|..
T Consensus 68 ~~~~g~~~vP~v~i~g~-~igg~~ 90 (114)
T 2hze_A 68 EQITGGKTVPRIFFGKT-SIGGYS 90 (114)
T ss_dssp HHHHSCCSSCEEEETTE-EEESHH
T ss_pred HHHhCCCCcCEEEECCE-EEeCcH
Confidence 34568999999999998 466654
No 231
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.14 E-value=0.49 Score=32.47 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=27.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|.+|+..-||+|....+.+.++.++|.
T Consensus 25 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~ 55 (133)
T 1x5d_A 25 EDVWMVEFYAPWCGHCKNLEPEWAAAASEVK 55 (133)
T ss_dssp SSEEEEEEECTTCHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCHHHHhhcHHHHHHHHHHH
Confidence 4678888889999999999999999888775
No 232
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=89.97 E-value=0.29 Score=32.64 Aligned_cols=29 Identities=17% Similarity=0.460 Sum_probs=23.0
Q ss_pred ccCCcceEEEEEecccCchhhhhHHHHHH
Q 027910 8 SAGKKLIRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 8 ~~~~~~v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+-+..+.+|.+|+-+.||+|..+...|.+
T Consensus 10 ~~~~~~~~v~vy~~~~Cp~C~~ak~~L~~ 38 (99)
T 3qmx_A 10 HGSAVSAKIEIYTWSTCPFCMRALALLKR 38 (99)
T ss_dssp CCSCCCCCEEEEECTTCHHHHHHHHHHHH
T ss_pred cCccCCCCEEEEEcCCChhHHHHHHHHHH
Confidence 33445678889999999999998887764
No 233
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.94 E-value=0.52 Score=32.97 Aligned_cols=54 Identities=17% Similarity=0.086 Sum_probs=29.1
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
.+..+..+.|++-..+.++..+-...+.. ..+...|+.++|+++++|+ .+.|..
T Consensus 42 ~~~~~L~~~~i~~~~vdid~~~~~~~~~~--~l~~~~g~~~vP~l~i~G~-~igg~~ 95 (130)
T 2cq9_A 42 MAKKLFHDMNVNYKVVELDLLEYGNQFQD--ALYKMTGERTVPRIFVNGT-FIGGAT 95 (130)
T ss_dssp HHHHHHHHHTCCCEEEETTTSTTHHHHHH--HHHHHHSSCCSSEEEETTE-EEEEHH
T ss_pred HHHHHHHHcCCCcEEEECcCCcCcHHHHH--HHHHHhCCCCcCEEEECCE-EEcChH
Confidence 34445555566544333332211111211 2344568999999999998 466653
No 234
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=89.90 E-value=0.31 Score=32.94 Aligned_cols=30 Identities=20% Similarity=0.301 Sum_probs=25.9
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
+..|.+|+.+-||+|....+.+.++.++++
T Consensus 30 ~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~ 59 (118)
T 1zma_A 30 ETATFFIGRKTCPYCRKFAGTLSGVVAETK 59 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHhcC
Confidence 467888888999999999999999888664
No 235
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=89.86 E-value=0.69 Score=31.23 Aligned_cols=57 Identities=18% Similarity=0.181 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCCcccccccCc-ccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCH
Q 027910 146 EFLVECARKVGVEGAAEFLDDP-NSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 205 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~-~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~ 205 (217)
..+..+..+.|++.....++.. .-...+.+.. ....|..++|+++|||+ .+.|....
T Consensus 33 ~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l--~~~~g~~tvP~ifi~g~-~igG~~~~ 90 (113)
T 3rhb_A 33 TEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVL--ERLTGQHTVPNVFVCGK-HIGGCTDT 90 (113)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHH--HHHHSCCSSCEEEETTE-EEESHHHH
T ss_pred HHHHHHHHHcCCCCeEEEeecCCCChHHHHHHH--HHHhCCCCcCEEEECCE-EEcCcHHH
Confidence 4455666777876554433321 1111222222 22348899999999999 56776543
No 236
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=89.69 E-value=0.21 Score=36.26 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=24.0
Q ss_pred HHhCCCCeecEEEE---CCe--eeecCC-------CCHHHHHHHHHHH
Q 027910 180 KYSANISGVPHFVL---NGK--HELSGG-------QPPEVYLRAFQVA 215 (217)
Q Consensus 180 a~~~gv~g~Pt~vv---~g~--~~~~G~-------~~~~~l~~~i~~~ 215 (217)
+...++.|+||++| +|+ ..+.|+ ..++.+.++|+.+
T Consensus 93 ~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 93 NLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp GGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHH
Confidence 45778999999987 465 234687 5555555555544
No 237
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=89.68 E-value=0.54 Score=32.42 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=28.2
Q ss_pred HHHhCCC---CeecEEEE---CCee--eecC-------CCCHHHHHHHHHHHh
Q 027910 179 KKYSANI---SGVPHFVL---NGKH--ELSG-------GQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv---~g~Pt~vv---~g~~--~~~G-------~~~~~~l~~~i~~~~ 216 (217)
.+...|| .|+||+++ +|+. ...| ..+.+.+.+.|+++.
T Consensus 80 l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 80 LSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 5567788 99999987 4652 2356 568899999988764
No 238
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.62 E-value=0.34 Score=33.01 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=23.0
Q ss_pred ceEEEEEecccCchhhhhH--HHHHHHHHhcCCCCceeEEEeec
Q 027910 13 LIRIDVSSDTVCPWCFVGK--RNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~--~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
.++|++|+-..||+|.... ..+++++++ .++.++.+.+
T Consensus 7 ~m~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~gi~y~~vdI 46 (111)
T 2ct6_A 7 GMVIRVFIASSSGFVAIKKKQQDVVRFLEA----NKIEFEEVDI 46 (111)
T ss_dssp CCCEEEEECSSCSCHHHHHHHHHHHHHHHH----TTCCEEEEET
T ss_pred ccEEEEEEcCCCCCcccchhHHHHHHHHHH----cCCCEEEEEC
Confidence 3678899999999999311 123334443 3466555544
No 239
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=89.17 E-value=0.065 Score=35.24 Aligned_cols=32 Identities=6% Similarity=-0.081 Sum_probs=26.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+.+.||+|....+.+.++.++++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 49 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE 49 (106)
Confidence 34667888889999999999999988877654
No 240
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=89.58 E-value=0.21 Score=31.39 Aligned_cols=23 Identities=26% Similarity=0.616 Sum_probs=18.7
Q ss_pred eEEEEEecccCchhhhhHHHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
|+|.+|+.+.||+|..+.+.|.+
T Consensus 1 m~v~~f~~~~C~~C~~~~~~l~~ 23 (81)
T 1h75_A 1 MRITIYTRNDCVQCHATKRAMEN 23 (81)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCChhHHHHHHHHHH
Confidence 46888999999999987776653
No 241
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=89.34 E-value=0.58 Score=33.27 Aligned_cols=40 Identities=15% Similarity=-0.038 Sum_probs=30.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+..-||.|-...+.|.++.++|++. ++.+..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~ 73 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQ 73 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEE
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEE
Confidence 3456666677789999999999999999988742 455543
No 242
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=89.31 E-value=0.15 Score=33.10 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=18.1
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+|.+|+.+.||+|..+...|.+
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~ 34 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKR 34 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHH
T ss_pred eEEEEECCCChHHHHHHHHHHH
Confidence 4778999999999997776654
No 243
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.31 E-value=0.3 Score=31.41 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=22.9
Q ss_pred EEEEecc----cCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDT----VCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~----~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-. .||||..+...|.+ .++.++++.+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~--------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV--------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH--------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH--------cCCCEEEEEee
Confidence 6778888 99999987776643 24666666554
No 244
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=89.21 E-value=0.35 Score=33.58 Aligned_cols=55 Identities=11% Similarity=0.038 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCCCcccc---cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHH
Q 027910 146 EFLVECARKVGVEGAAE---FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPE 206 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~---~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~ 206 (217)
....++..+.|++...+ .+.+. ..+++.... ..|...+|.++|||+ .|.|.+...
T Consensus 35 ~~ak~lL~~~gv~~~~~~~~dv~~~---~~~~~~l~~--~sg~~tvP~vfI~g~-~iGG~d~l~ 92 (121)
T 3gx8_A 35 RATIGLLGNQGVDPAKFAAYNVLED---PELREGIKE--FSEWPTIPQLYVNKE-FIGGCDVIT 92 (121)
T ss_dssp HHHHHHHHHHTBCGGGEEEEECTTC---HHHHHHHHH--HHTCCSSCEEEETTE-EEESHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEecCC---HHHHHHHHH--HhCCCCCCeEEECCE-EEecHHHHH
Confidence 45666777788875444 22221 223333222 237788999999999 567775443
No 245
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.21 E-value=0.43 Score=41.59 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=32.5
Q ss_pred HHHHHHhCCCCeecEEEECCeeeecCCCCHHHHHHHHHH
Q 027910 176 EELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 176 ~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~~~i~~ 214 (217)
..+.+.+.||.++||+++||+....|..+.+.+.+.|++
T Consensus 159 ~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 159 FQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp CHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCC
T ss_pred hHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhh
Confidence 344677899999999999999766899999999888754
No 246
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=89.15 E-value=0.36 Score=32.87 Aligned_cols=30 Identities=13% Similarity=-0.046 Sum_probs=23.5
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.+..|.+|+..-||+|....+.+.++.+++
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~ 52 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN 52 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 456777777888999998888888877765
No 247
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=89.15 E-value=0.38 Score=32.17 Aligned_cols=32 Identities=16% Similarity=0.050 Sum_probs=27.5
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..+.+|+.+-||+|....+.+.++.+++..
T Consensus 24 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~ 55 (120)
T 1mek_A 24 HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKA 55 (120)
T ss_dssp CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTT
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc
Confidence 45678888899999999999999999887763
No 248
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=89.05 E-value=0.5 Score=33.52 Aligned_cols=31 Identities=13% Similarity=0.020 Sum_probs=24.3
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|..|+-.-||.|....+.+.++.++|.
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 53 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK 53 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhC
Confidence 4556666677889999999999888887764
No 249
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=88.85 E-value=0.28 Score=33.26 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=28.3
Q ss_pred HHHHhCCCCeecEEEE--CC-e-eeecCC----CCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NG-K-HELSGG----QPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g-~-~~~~G~----~~~~~l~~~i~~~~ 216 (217)
+.+.+.||.++||+++ +| + ..+.|. .+.+.|.+.|+++.
T Consensus 66 ~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 66 QTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp HHHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHH
Confidence 4567899999999987 23 2 224554 78899999888653
No 250
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=88.76 E-value=0.36 Score=32.92 Aligned_cols=32 Identities=13% Similarity=0.011 Sum_probs=26.2
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+.+-||+|....+.+.++.++|+
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~ 63 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPA 63 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCc
Confidence 34567778888999999999999998877654
No 251
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=88.54 E-value=0.75 Score=35.10 Aligned_cols=40 Identities=13% Similarity=0.181 Sum_probs=31.6
Q ss_pred HHHHHhCCCCeecEEEE--CCee-eecCCCCHHHHHHHHHHHh
Q 027910 177 ELKKYSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv--~g~~-~~~G~~~~~~l~~~i~~~~ 216 (217)
.+.+.+.||.++||+++ +|+. .+.|..+.+.+.+.|.+..
T Consensus 194 ~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 194 TDLAKRFDVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp HHHHHHTTCCSSSEEEEEETTEEEECCSCCSHHHHHHHHHHHT
T ss_pred HHHHHHcCCcccCEEEEEECCeEEEecCCCCHHHHHHHHHhhh
Confidence 34678899999999988 6663 3578899999999988653
No 252
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=88.52 E-value=0.65 Score=31.19 Aligned_cols=31 Identities=13% Similarity=-0.028 Sum_probs=25.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
..+..|..|+..-||+|....+.+.++.++|
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~ 62 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY 62 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc
Confidence 4567778888899999999999999887644
No 253
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=88.50 E-value=0.9 Score=30.77 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=25.0
Q ss_pred HHHhCCCCeecEEEE--C----Cee--eecCCCCHHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--N----GKH--ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~----g~~--~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.||.++||+++ + |+. .+.|..+ +.+++.|++.
T Consensus 68 ~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 68 AADAYGVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHh
Confidence 456778999999977 4 542 3568754 5588887764
No 254
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=88.49 E-value=0.34 Score=32.32 Aligned_cols=24 Identities=21% Similarity=0.412 Sum_probs=19.4
Q ss_pred ceEEEEEecccCchhhhhHHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+.+|.+|+-..||+|..+.+.|.+
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH
Confidence 345778999999999998877754
No 255
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=88.06 E-value=0.48 Score=31.97 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=26.2
Q ss_pred CCCeecEEEE--CC-e---eeecCCCCHHHHHHHHHHHh
Q 027910 184 NISGVPHFVL--NG-K---HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 184 gv~g~Pt~vv--~g-~---~~~~G~~~~~~l~~~i~~~~ 216 (217)
+|.++||+++ +| + ..+.|..+.+.|.+.|++..
T Consensus 78 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 78 EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 9999999987 33 3 24578889999999998753
No 256
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.99 E-value=0.58 Score=31.81 Aligned_cols=54 Identities=7% Similarity=-0.099 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCCcccccccCcccchhHHHHHHHHH------hCCCCeecEEEECCeeeecCCCC
Q 027910 147 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKY------SANISGVPHFVLNGKHELSGGQP 204 (217)
Q Consensus 147 ~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~------~~gv~g~Pt~vv~g~~~~~G~~~ 204 (217)
.+.+++++.|++-+...+... ...++...... ..|...+|.++|||+ .+.|.+.
T Consensus 29 ~ak~~L~~~gi~y~~vdI~~~---~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~-~iGG~d~ 88 (111)
T 2ct6_A 29 DVVRFLEANKIEFEEVDITMS---EEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDR-YCGDYDS 88 (111)
T ss_dssp HHHHHHHHTTCCEEEEETTTC---HHHHHHHHHSCCTTTCCSSSSCCSCEEEETTE-EEEEHHH
T ss_pred HHHHHHHHcCCCEEEEECCCC---HHHHHHHHHHhcccccccCCCCCCCEEEECCE-EEeCHHH
Confidence 567777888887665533321 12222222211 027889999999999 4666644
No 257
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.97 E-value=0.72 Score=32.24 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=22.8
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
+..|..|+.+-||.|....+.+.++.++|
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~la~~~ 59 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF 59 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHC
Confidence 56677777788888888888888877765
No 258
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=87.87 E-value=0.94 Score=30.93 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=27.9
Q ss_pred cceEEEEEecc-------cCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDT-------VCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~-------~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+..+..|+-. -||.|....+.+.++.++|++ ++.+.
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~ 67 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFI 67 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEE
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEE
Confidence 45566666667 999999999999998887753 44444
No 259
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=87.83 E-value=0.37 Score=30.19 Aligned_cols=22 Identities=23% Similarity=0.705 Sum_probs=17.9
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+|.+|+.+.||+|..+...|.+
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~ 23 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSS 23 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCChhHHHHHHHHHH
Confidence 4678999999999987776654
No 260
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=87.61 E-value=0.99 Score=31.29 Aligned_cols=37 Identities=8% Similarity=-0.195 Sum_probs=28.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+..-||+|....+.+.++.++|+ ++.+..
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~ 82 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLV 82 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEE
Confidence 4566777777999999999999999988874 355443
No 261
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.91 E-value=0.57 Score=32.55 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=27.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..|.+|+..-||+|....+.+.++.++|.+
T Consensus 34 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~ 65 (140)
T 2dj1_A 34 KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKD 65 (140)
T ss_dssp CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHS
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc
Confidence 46788889999999999999999998887764
No 262
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=86.89 E-value=0.55 Score=32.38 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=25.5
Q ss_pred HhCCCCeecEEEE--CCee--eecCCC-------CHHHHHHHHHH
Q 027910 181 YSANISGVPHFVL--NGKH--ELSGGQ-------PPEVYLRAFQV 214 (217)
Q Consensus 181 ~~~gv~g~Pt~vv--~g~~--~~~G~~-------~~~~l~~~i~~ 214 (217)
.+.+|.++|||++ ||+. .+.|.. +.+.++..|.+
T Consensus 67 ~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 67 QHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp TTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred HHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 5679999999988 7762 346664 57888888864
No 263
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=86.89 E-value=0.25 Score=33.83 Aligned_cols=32 Identities=9% Similarity=-0.064 Sum_probs=27.0
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..+..|.+|+..-||+|....+.+.++.++|+
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 66 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP 66 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 34567888889999999999999999888764
No 264
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=86.73 E-value=0.93 Score=34.55 Aligned_cols=39 Identities=15% Similarity=0.328 Sum_probs=30.3
Q ss_pred HHHHhCCCCeecEEEE--CCe-eeecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NGK-HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~-~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.+.||.|+||+++ +|+ ....|..+.+.+.+.|++..
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 80 VLASRFDVSGYPTIKILKKGQAVDYEGSRTQEEIVAKVREVS 121 (241)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEECCSCSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCCEEEEEcCCCcccccCcccHHHHHHHHhhcc
Confidence 3567889999999987 565 23478889999999888653
No 265
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=86.56 E-value=0.17 Score=34.79 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEE--CCee--eecCCCCHHHHHHHHHHHh
Q 027910 144 DKEFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 144 ~~~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~~~l~~~i~~~~ 216 (217)
-...|.+++.... + -.+ .++-++. .+.+.+.|+.++||+++ +|+. .+.|. +.+.|.+.|+++.
T Consensus 54 ~~~~l~~~~~~~~-~-v~~~~v~~~~~-------~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 54 IAPVFAEYAKKFP-G-AVFLKVDVDEL-------KEVAEKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVKHV 121 (130)
T ss_dssp SHHHHHHHHHHCT-T-BCCEECCTTTS-------GGGHHHHTCCSSCCCCBCTTTTCCBCCCTT-CTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHCC-C-CEEEEEeccch-------HHHHHHcCCCccceEEEEeCCeEEEEEeCC-CHHHHHHHHHHHH
Confidence 3556667766653 1 122 3332221 12345679999999988 6652 24674 6678888887654
No 266
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=86.09 E-value=0.86 Score=34.78 Aligned_cols=39 Identities=10% Similarity=-0.033 Sum_probs=31.0
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+.+-||+|....+.+.++.++|++ .+.+..
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~ 67 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAK 67 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEE
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEE
Confidence 356777788889999999999999999998875 355443
No 267
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=86.01 E-value=0.29 Score=32.61 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=21.4
Q ss_pred CCcceEEEEEecccCchhhhhHHHHHH
Q 027910 10 GKKLIRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 10 ~~~~v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
....+.|.+|+-..||+|..+.+.|.+
T Consensus 13 ~~~~~~v~~f~~~~C~~C~~~~~~L~~ 39 (100)
T 1wjk_A 13 NRALPVLTLFTKAPCPLCDEAKEVLQP 39 (100)
T ss_dssp CCCCCEEEEEECSSCHHHHHHHHHTST
T ss_pred cCCCCEEEEEeCCCCcchHHHHHHHHH
Confidence 345567888999999999998877654
No 268
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=85.26 E-value=0.47 Score=30.85 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=20.1
Q ss_pred eEEEEEecccCchhhhhHHHHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKA 37 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~ 37 (217)
++|+.|+-+.||+|-.+.+.|.++
T Consensus 1 m~vv~f~a~~C~~C~~~~~~L~~~ 24 (87)
T 1ttz_A 1 MALTLYQRDDCHLCDQAVEALAQA 24 (87)
T ss_dssp -CEEEEECSSCHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCchHHHHHHHHHHH
Confidence 468999999999999998888654
No 269
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=85.23 E-value=0.63 Score=31.85 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=24.6
Q ss_pred EEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 2 i~iY~~~~C~~C~kak~~L~~--------~gi~~~~~di~ 33 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE--------HKVAYDFHDYK 33 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH--------TTCCEEEEEHH
T ss_pred EEEEECCCChHHHHHHHHHHH--------CCCceEEEeec
Confidence 778999999999988776653 35777777664
No 270
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=85.40 E-value=0.17 Score=34.91 Aligned_cols=36 Identities=8% Similarity=0.098 Sum_probs=26.7
Q ss_pred cccCCcceEEEEEecccCchhhhhHHHH---HHHHHhcC
Q 027910 7 SSAGKKLIRIDVSSDTVCPWCFVGKRNL---DKAIASSK 42 (217)
Q Consensus 7 ~~~~~~~v~i~~y~D~~CP~cy~~~~~l---~~~~~~~~ 42 (217)
......+..|.+|+.+-||+|....+.+ .++.+.+.
T Consensus 14 ~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~ 52 (130)
T 2lst_A 14 LAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE 52 (130)
Confidence 3344557788888899999999999888 66655443
No 271
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.00 E-value=1.3 Score=30.12 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=27.5
Q ss_pred EEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.|..|+..-||+|....+.+.++.+++++ .++.+.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~v~~~ 59 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGED-LEVNIA 59 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGG-GTCEEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhcc-CCeEEE
Confidence 67888889999999999999998887752 234444
No 272
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=84.71 E-value=1.1 Score=32.18 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=31.7
Q ss_pred CcceEEEEEecccCch-hhhhHHHHHHHHHhcCCC--CceeEEEe
Q 027910 11 KKLIRIDVSSDTVCPW-CFVGKRNLDKAIASSKDQ--YDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~-cy~~~~~l~~~~~~~~~~--~~v~v~~~ 52 (217)
..++.|.+|+-.-||. |-...+.|.++.++|+.. .++.+...
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~i 78 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFV 78 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEE
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEE
Confidence 4567888888899996 999999999998877632 14665543
No 273
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=84.65 E-value=1.6 Score=36.24 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=30.9
Q ss_pred HHHHhCCCCeecEEEE--CCee---eecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL--NGKH---ELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~~---~~~G~~~~~~l~~~i~~~~ 216 (217)
..+.+.||.|+||+++ +|+. .+.|..+.+.|.+.|.+..
T Consensus 73 ~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 73 DIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQK 116 (382)
T ss_dssp HHHHHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc
Confidence 4567889999999988 6763 2579999999999887653
No 274
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=84.65 E-value=0.93 Score=30.70 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=17.9
Q ss_pred eEEEEEecccCchhhhhHHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~ 35 (217)
..|.+|+.+.||+|..+.+.|.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~ 40 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILN 40 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHT
T ss_pred CCEEEEEeCCChhHHHHHHHHH
Confidence 4588899999999998777654
No 275
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=84.25 E-value=1 Score=31.12 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=25.0
Q ss_pred EEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~--------~gi~~~~~di~ 33 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR--------HDVVFQEHNIM 33 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH--------TTCCEEEEETT
T ss_pred EEEEeCCCCHHHHHHHHHHHH--------cCCCeEEEecc
Confidence 689999999999998876652 35777777665
No 276
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=83.90 E-value=1.6 Score=34.18 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=30.3
Q ss_pred HHHHHhCCCC--eecEEEE--CCe----eeecCCCCHHHHHHHHHHH
Q 027910 177 ELKKYSANIS--GVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 177 ~~~a~~~gv~--g~Pt~vv--~g~----~~~~G~~~~~~l~~~i~~~ 215 (217)
...+.+.||. |+|||++ +|+ ..+.|..+.+.|.+.|++.
T Consensus 71 ~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 71 MELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp HHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 3457789999 9999987 565 3457988999999888753
No 277
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=83.76 E-value=0.58 Score=32.47 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=26.1
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 4 M~i~iY~~p~C~~c~ka~~~L~~--------~gi~~~~~di~ 37 (120)
T 3gkx_A 4 MKTLFLQYPACSTCQKAKKWLIE--------NNIEYTNRLIV 37 (120)
T ss_dssp CCCEEEECTTCHHHHHHHHHHHH--------TTCCCEEEETT
T ss_pred cEEEEEECCCChHHHHHHHHHHH--------cCCceEEEecc
Confidence 45889999999999998776652 35777777665
No 278
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=83.74 E-value=0.78 Score=31.47 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=26.6
Q ss_pred HHhCCCCeecEEEE--CCe----eeec-CCCCHHHHHHHHHHHh
Q 027910 180 KYSANISGVPHFVL--NGK----HELS-GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 180 a~~~gv~g~Pt~vv--~g~----~~~~-G~~~~~~l~~~i~~~~ 216 (217)
+.+.||.++||+++ +|+ ..+. |..+.+.|.+.|++..
T Consensus 74 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 74 NDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp CSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred HhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 34689999999987 332 1234 6578899999888653
No 279
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=83.67 E-value=0.96 Score=31.45 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=29.4
Q ss_pred HHHhCCCCe--ecEEEE--C--Ce-eeec--CCCCHHHHHHHHHHHh
Q 027910 179 KKYSANISG--VPHFVL--N--GK-HELS--GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~g--~Pt~vv--~--g~-~~~~--G~~~~~~l~~~i~~~~ 216 (217)
.+..+||.+ +||+++ + |+ |.+. |..+.+.+.+.|++..
T Consensus 68 ~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 68 HAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp GTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHH
Confidence 467899999 999977 3 43 4454 9999999999888653
No 280
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.66 E-value=1.5 Score=30.34 Aligned_cols=30 Identities=7% Similarity=-0.237 Sum_probs=26.3
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
++.|..|+..-||.|....+.+.++.++|.
T Consensus 27 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~ 56 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKYN 56 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHHC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhC
Confidence 467788888999999999999999988886
No 281
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=83.45 E-value=2.1 Score=29.69 Aligned_cols=29 Identities=3% Similarity=-0.176 Sum_probs=19.4
Q ss_pred EEEEecccCchhhhhHHHHHHHHHhcCCCC
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKAIASSKDQY 45 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~ 45 (217)
-.++.+|..|||-.-..... .++++..++
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p-~l~~la~~~ 59 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQ-HLSVLARKF 59 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHH-HHHHHHHHC
T ss_pred CEEEEEEECCCChHHHHHHH-HHHHHHHHC
Confidence 35788899999987776544 445554433
No 282
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=83.28 E-value=2.1 Score=34.98 Aligned_cols=40 Identities=20% Similarity=0.050 Sum_probs=32.3
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
..+..+..|+.+-||+|....+.+.++.+.|++..++.+.
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~ 305 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIA 305 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEE
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEE
Confidence 4567888899999999999999999999988754444444
No 283
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=83.25 E-value=0.67 Score=31.55 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=17.2
Q ss_pred EEEEEecccCchhhhhHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~ 35 (217)
+|.+|+-+.||||..+.+.|.
T Consensus 18 ~v~vy~~~~Cp~C~~ak~~L~ 38 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRVKELFS 38 (114)
T ss_dssp SEEEEECTTCHHHHHHHHHHH
T ss_pred CEEEEEcCCCCcHHHHHHHHH
Confidence 467799999999998777664
No 284
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=83.00 E-value=0.96 Score=30.13 Aligned_cols=21 Identities=10% Similarity=0.053 Sum_probs=16.8
Q ss_pred EEEEec-----ccCchhhhhHHHHHH
Q 027910 16 IDVSSD-----TVCPWCFVGKRNLDK 36 (217)
Q Consensus 16 i~~y~D-----~~CP~cy~~~~~l~~ 36 (217)
|.+|+- +.||+|..+.+.|.+
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~ 44 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNS 44 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHH
Confidence 556887 999999988877754
No 285
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=82.68 E-value=0.79 Score=30.85 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=17.0
Q ss_pred EEEEEec-----ccCchhhhhHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
+|.+|+- +.||||..+...|.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~ 41 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILN 41 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHH
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHH
Confidence 3677888 99999998777664
No 286
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=82.66 E-value=0.85 Score=30.75 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=17.9
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
.|.+|+-+.||+|..+.+.|.+
T Consensus 20 ~v~vy~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 20 TVVIYSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHH
Confidence 3788999999999987776653
No 287
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=82.11 E-value=2.8 Score=31.67 Aligned_cols=38 Identities=16% Similarity=0.053 Sum_probs=30.4
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|..|+.+-||+|....+.+.++.++|+ ++.+..
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~---~v~~~~ 172 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND---YITSKV 172 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC---CeEEEE
Confidence 45777888999999999999999999888763 355543
No 288
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=82.10 E-value=0.49 Score=32.82 Aligned_cols=34 Identities=6% Similarity=0.083 Sum_probs=25.8
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.|.+|+-+.||+|..+...|++ .++.++++.+.
T Consensus 4 M~i~iY~~p~C~~c~ka~~~L~~--------~gi~~~~~di~ 37 (119)
T 3f0i_A 4 MSVVIYHNPKCSKSRETLALLEN--------QGIAPQVIKYL 37 (119)
T ss_dssp TCCEEECCTTCHHHHHHHHHHHH--------TTCCCEEECHH
T ss_pred cEEEEEECCCChHHHHHHHHHHH--------cCCceEEEEec
Confidence 35889999999999998876652 35777766664
No 289
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=82.04 E-value=3.3 Score=29.09 Aligned_cols=28 Identities=11% Similarity=-0.058 Sum_probs=17.7
Q ss_pred EEEecccCchhhhhHHHHHHHHHhcCCCC
Q 027910 17 DVSSDTVCPWCFVGKRNLDKAIASSKDQY 45 (217)
Q Consensus 17 ~~y~D~~CP~cy~~~~~l~~~~~~~~~~~ 45 (217)
.++.+|.-|||-.-...... ++++..++
T Consensus 25 ~vlv~F~a~wC~~C~~~~p~-l~~l~~~~ 52 (142)
T 1qgv_A 25 VVVIRFGHDWDPTCMKMDEV-LYSIAEKV 52 (142)
T ss_dssp EEEEEEECTTSHHHHHHHHH-HHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHHHH-HHHHHHHh
Confidence 46778888888877765544 44444334
No 290
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=81.99 E-value=0.82 Score=30.17 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=18.1
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
.|.+|+-+.||+|..+.+.|.+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~ 34 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQ 34 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCHhHHHHHHHHHH
Confidence 4777999999999988877654
No 291
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=81.93 E-value=1.7 Score=30.07 Aligned_cols=54 Identities=30% Similarity=0.297 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCC-cccc-cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCCHHH
Q 027910 147 FLVECARKVGVE-GAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEV 207 (217)
Q Consensus 147 ~L~~ia~~~Gld-~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~~~~ 207 (217)
...++....|+. -..+ ..++++++ +..... .|-.-+|-++|||+ .|.|.+....
T Consensus 40 ~ak~lL~~~gv~~~~~~~v~~~~~~r----~~l~~~--sg~~TvPqIFI~g~-~IGG~Ddl~~ 95 (118)
T 2wul_A 40 AVVQILRLHGVRDYAAYNVLDDPELR----QGIKDY--SNWPTIPQVYLNGE-FVGGCDILLQ 95 (118)
T ss_dssp HHHHHHHHTTCCSCEEEETTSCHHHH----HHHHHH--HTCCSSCEEEETTE-EEECHHHHHH
T ss_pred HHHHHHHHhCCcCeEeecccCCHHHH----HHHHHh--ccCCCCCeEeECCE-EECCHHHHHH
Confidence 344566667763 3333 33444433 333322 24567999999999 5777754433
No 292
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=81.60 E-value=1 Score=31.01 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=28.7
Q ss_pred cceEEEEEecccCchhhhhHHHHH--HHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLD--KAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~--~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+..-||+|....+.+. ++.+.+.+ ++.+..
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~ 68 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVK 68 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEE
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEE
Confidence 466788888899999999999998 87776642 344443
No 293
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=81.51 E-value=2.6 Score=30.45 Aligned_cols=40 Identities=10% Similarity=0.039 Sum_probs=28.9
Q ss_pred HHHHHHhCCCCeecEEEE---C-Ce--eeecCCCCHHHHHHHHHHHh
Q 027910 176 EELKKYSANISGVPHFVL---N-GK--HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 176 ~~~~a~~~gv~g~Pt~vv---~-g~--~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.+...++.|+|+++| + |+ ..+.| .+.+.|.+.|+++.
T Consensus 90 ~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 90 GQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 344567889999999977 3 53 12445 79999999888653
No 294
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.13 E-value=1.2 Score=31.07 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=18.1
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
.|.+|+.+.||+|..+.+.|.+
T Consensus 28 ~vvvf~~~~Cp~C~~~~~~L~~ 49 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMAKKLFHD 49 (130)
T ss_dssp SEEEEECSSCSHHHHHHHHHHH
T ss_pred cEEEEEcCCChHHHHHHHHHHH
Confidence 4666999999999998887764
No 295
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=80.85 E-value=1.7 Score=30.85 Aligned_cols=41 Identities=5% Similarity=-0.155 Sum_probs=29.8
Q ss_pred CcceEEEEEec-ccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSSD-TVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~D-~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..+..|.+|+- .-||.|-...+.|.++.++|++ .++.|...
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~-~~~~vv~v 75 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK-AGAKILGV 75 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 33455555554 8899999999999999988863 35666543
No 296
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=80.84 E-value=2.1 Score=30.29 Aligned_cols=37 Identities=11% Similarity=-0.110 Sum_probs=28.2
Q ss_pred eEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 14 IRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 14 v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..|.+|+ ..-||.|-...+.|.++.++|.+ .++.+..
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~ 75 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFEN-DDSAALA 75 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSS-SSEEEEE
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCcEEEE
Confidence 5666665 89999999999999988888763 3565544
No 297
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=80.52 E-value=2.5 Score=29.45 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=17.6
Q ss_pred CCCCeecEEEECCeeeecCCCCHH
Q 027910 183 ANISGVPHFVLNGKHELSGGQPPE 206 (217)
Q Consensus 183 ~gv~g~Pt~vv~g~~~~~G~~~~~ 206 (217)
.|...+|.++|||+ .|.|.+...
T Consensus 66 ~G~~tVP~IfI~G~-~IGG~ddl~ 88 (127)
T 3l4n_A 66 TGRGTVPNLLVNGV-SRGGNEEIK 88 (127)
T ss_dssp HSCCSSCEEEETTE-ECCCHHHHH
T ss_pred cCCCCcceEEECCE-EEcCHHHHH
Confidence 47889999999998 566765443
No 298
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=80.21 E-value=1.7 Score=36.02 Aligned_cols=39 Identities=5% Similarity=0.043 Sum_probs=31.1
Q ss_pred HHHHHhCCCCeecEEEE--CCee-eecCCCCHHHHHHHHHHH
Q 027910 177 ELKKYSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv--~g~~-~~~G~~~~~~l~~~i~~~ 215 (217)
...+.+.||.|+||+++ +|+. .+.|..+.+.+.+.|.+.
T Consensus 81 ~~l~~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 81 AAVAKKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDV 122 (367)
T ss_dssp HHHHHHHTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHh
Confidence 35678899999999977 6763 357999999999988754
No 299
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=80.14 E-value=0.93 Score=30.95 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=23.5
Q ss_pred HHHhCCCCeecEEEEC-CeeeecCCC--CHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVLN-GKHELSGGQ--PPEVYLRAFQV 214 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv~-g~~~~~G~~--~~~~l~~~i~~ 214 (217)
.+.+.||.|+||+++- +...+.|.. ..+.+.+.|++
T Consensus 84 ~~~~~~i~~~Pt~~~~~~~~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCSSSEEEETTSSCEEEGGGGGCHHHHHHHHHC
T ss_pred HHHHCCCCeeCEEEEEcCCceEeccccCCHHHHHHHHhc
Confidence 4456899999999883 222444433 46777777754
No 300
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=80.10 E-value=1.2 Score=30.90 Aligned_cols=32 Identities=6% Similarity=0.071 Sum_probs=24.8
Q ss_pred EEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-+.||+|..+...|+ +.++.++++.+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~--------~~gi~~~~~di~ 38 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE--------QQGITPQVVLYL 38 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH--------TTTCCCEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHH--------HcCCCcEEEeec
Confidence 78899999999999877664 346777777665
No 301
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=80.10 E-value=1.2 Score=31.87 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=18.3
Q ss_pred EEEEEecccCchhhhhHHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
.|.+|+.+.||+|..+.+.|.+
T Consensus 50 ~Vvvf~~~~Cp~C~~~k~~L~~ 71 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMAKKLFHD 71 (146)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHH
Confidence 4667999999999998887764
No 302
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=79.87 E-value=1.4 Score=31.27 Aligned_cols=21 Identities=14% Similarity=0.172 Sum_probs=15.9
Q ss_pred EEEEEec-----ccCchhhhhHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
+|.+|+- +.||||..+...|.
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~ 61 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALA 61 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHH
Confidence 4666777 89999998766553
No 303
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=79.86 E-value=0.88 Score=31.73 Aligned_cols=63 Identities=2% Similarity=-0.191 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCCccccccc-CcccchhHHHHHH-HH-HhCCCCeecEEEECCeeeecCCCCHHHHH
Q 027910 146 EFLVECARKVGVEGAAEFLD-DPNSGLNEVHEEL-KK-YSANISGVPHFVLNGKHELSGGQPPEVYL 209 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~-~~~~~~~~~~~~~-~a-~~~gv~g~Pt~vv~g~~~~~G~~~~~~l~ 209 (217)
..++.+++..|++-++..++ +++.++.+.+... .. -..|...+|.++|||++ +.|.++...+.
T Consensus 20 ~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~-iGG~Dd~~~l~ 85 (121)
T 1u6t_A 20 QDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQY-RGDYDAFFEAR 85 (121)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEE-EEEHHHHHHHH
T ss_pred HHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEECCEE-EechHHHHHhh
Confidence 45677888889986666443 4443433333220 00 01278899999999995 67765444443
No 304
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=79.54 E-value=1.2 Score=28.85 Aligned_cols=13 Identities=23% Similarity=0.066 Sum_probs=11.7
Q ss_pred EEEEEecccCchh
Q 027910 15 RIDVSSDTVCPWC 27 (217)
Q Consensus 15 ~i~~y~D~~CP~c 27 (217)
+|.+|+-..||+|
T Consensus 3 ~v~ly~~~~C~~c 15 (93)
T 1t1v_A 3 GLRVYSTSVTGSR 15 (93)
T ss_dssp CEEEEECSSCSCH
T ss_pred CEEEEEcCCCCCc
Confidence 5788999999999
No 305
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=79.49 E-value=2.1 Score=32.33 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=27.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..++.+..|+.+-||+|....+.+.++.++|+
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 45677999999999999999999999888775
No 306
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=79.33 E-value=1.8 Score=33.55 Aligned_cols=30 Identities=13% Similarity=0.222 Sum_probs=26.9
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.++.|..|+-+-||+|....+.+.++...+
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~ 167 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEA 167 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHc
Confidence 578899999999999999999999988776
No 307
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=79.31 E-value=1.3 Score=31.03 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=17.9
Q ss_pred EEEEecccCchhhhhHHHHHH
Q 027910 16 IDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~ 36 (217)
|++|+-..||||..+...|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLEN 36 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHH
Confidence 888999999999998876654
No 308
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=79.21 E-value=2 Score=29.32 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=22.8
Q ss_pred EEEEEecccCchhhhh-HHHHHHHHHhcCCCCceeEEEeecc
Q 027910 15 RIDVSSDTVCPWCFVG-KRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~-~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
.|.+|+-+.||+|..+ .+.| +++. ...+.++...+.
T Consensus 26 ~Vvvf~~~~Cp~C~~alk~~L----~~~~-~~~i~~~~vdid 62 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAALNTLF----EKLK-VPRSKVLVLQLN 62 (118)
T ss_dssp SEEEEECSSCHHHHHHHHHHH----TTSC-CCGGGEEEEEGG
T ss_pred cEEEEEcCCCcCHHHHHHHHH----HHcC-CCCCCeEEEECc
Confidence 4777999999999987 5444 4322 112666655554
No 309
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=78.75 E-value=0.99 Score=31.35 Aligned_cols=28 Identities=11% Similarity=0.035 Sum_probs=23.1
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIA 39 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~ 39 (217)
.++.|..|+..-||+|....+.+.++.+
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~ 67 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLN 67 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGG
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHH
Confidence 4678888888999999999988876654
No 310
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=78.71 E-value=1.8 Score=30.24 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=23.0
Q ss_pred EEEEEecccCchhhhh-HHHHHHHHHhcCCCCceeEEEeecc
Q 027910 15 RIDVSSDTVCPWCFVG-KRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~-~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
+|.+|+-+.||||..+ .+.| +++.. ..+.+++..+.
T Consensus 38 ~Vvvy~~~~Cp~C~~a~k~~L----~~~~~-~~i~~~~vdvd 74 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKATLSTLF----QELNV-PKSKALVLELD 74 (129)
T ss_dssp SEEEEECTTCHHHHHHHHHHH----TTSCC-CGGGEEEEEGG
T ss_pred CEEEEECCCCCchHHHHHHHH----HhcCc-cCCCcEEEEcc
Confidence 4788999999999987 5444 33221 12666655554
No 311
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=78.53 E-value=1.5 Score=29.81 Aligned_cols=22 Identities=9% Similarity=-0.058 Sum_probs=17.8
Q ss_pred eEEEEEec-----ccCchhhhhHHHHH
Q 027910 14 IRIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 14 v~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
-.|++|+- +.||||..+...|.
T Consensus 16 ~~Vvlf~kg~~~~~~Cp~C~~ak~~L~ 42 (111)
T 3zyw_A 16 APCMLFMKGTPQEPRCGFSKQMVEILH 42 (111)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCCcchhHHHHHHHHH
Confidence 35778888 99999999877665
No 312
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=78.43 E-value=2.4 Score=28.79 Aligned_cols=30 Identities=10% Similarity=-0.145 Sum_probs=25.3
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.+..+..|+-+-||+|....+.+.++.+.|
T Consensus 33 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~ 62 (127)
T 3h79_A 33 EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQ 62 (127)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCccHHHHHHhHHHHHHHHHH
Confidence 467778888899999999999999887655
No 313
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=78.36 E-value=1.6 Score=29.95 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=26.9
Q ss_pred HHHHHhCCCCe-ecEEEE--CCeee---ecCCCCHHHHHHHH
Q 027910 177 ELKKYSANISG-VPHFVL--NGKHE---LSGGQPPEVYLRAF 212 (217)
Q Consensus 177 ~~~a~~~gv~g-~Pt~vv--~g~~~---~~G~~~~~~l~~~i 212 (217)
.+.|.+.||.+ .|+|++ ||+.+ -.|.-+.+.|+++|
T Consensus 70 n~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 70 DYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred HHHHHHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 44688999995 999988 78732 25777888887765
No 314
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=78.28 E-value=1.6 Score=30.25 Aligned_cols=28 Identities=21% Similarity=0.223 Sum_probs=23.8
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
..|..|+..-||+|....+.+.++.++|
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~ 60 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEV 60 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTC
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHC
Confidence 5677788899999999999999887754
No 315
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=78.11 E-value=2.1 Score=30.35 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=27.5
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..++.|..|+-.-||.|....+.+.++.++|++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~ 54 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK 54 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC
Confidence 356677778889999999999999999887754
No 316
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=78.06 E-value=2.6 Score=29.06 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=26.2
Q ss_pred EEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeeccc
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFFL 56 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~l 56 (217)
.|.+|+-+.||+|..+...|++ .++.++++.+.-
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~--------~gi~~~~~di~~ 37 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD--------LAWDYDAIDIKK 37 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH--------HTCCEEEEETTT
T ss_pred eEEEEeCCCChHHHHHHHHHHH--------cCCceEEEEecc
Confidence 3789999999999998877653 357777777653
No 317
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=77.79 E-value=1.8 Score=30.88 Aligned_cols=33 Identities=15% Similarity=-0.038 Sum_probs=24.4
Q ss_pred CcceEEEEEeccc-CchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTV-CPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~-CP~cy~~~~~l~~~~~~~~~ 43 (217)
..++-|+||.++- |+-|....+.|.++.++|.+
T Consensus 34 ~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g 67 (140)
T 2qgv_A 34 APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD 67 (140)
T ss_dssp CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT
T ss_pred CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC
Confidence 3456666666643 78888999999999988764
No 318
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=77.74 E-value=2 Score=35.16 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=30.0
Q ss_pred HHHHhCCCCeecEEEE--CCe-eeecCCCCHHHHHHHHHHH
Q 027910 178 LKKYSANISGVPHFVL--NGK-HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv--~g~-~~~~G~~~~~~l~~~i~~~ 215 (217)
+.+.+.||.|+||+++ +|+ ..+.|..+.+.+.+.|++.
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDL 120 (350)
T ss_dssp HHHHHHTCCSTTEEEEEETTEEEEECSCCCHHHHHHHHHTT
T ss_pred HHHHhcCCCccceEEEEECCcEEEecCCCCHHHHHHHHHHh
Confidence 4667889999999987 676 2357999999999888653
No 319
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=77.70 E-value=2.5 Score=33.90 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=29.2
Q ss_pred HHHHHhCCCCeecEEEE--CCe-------------------eeecCCCCHHHHHHHHHH
Q 027910 177 ELKKYSANISGVPHFVL--NGK-------------------HELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv--~g~-------------------~~~~G~~~~~~l~~~i~~ 214 (217)
.+.+.+.||.|+||+++ +|+ ..+.|..+.+.+.+.|.+
T Consensus 81 ~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~ 139 (298)
T 3ed3_A 81 KALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLS 139 (298)
T ss_dssp HHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHT
T ss_pred HHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHH
Confidence 34567899999999988 554 245788899999888764
No 320
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=77.34 E-value=1.4 Score=29.65 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=15.6
Q ss_pred EEEEEec-----ccCchhhhhHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
.|.+|+- +.||||..+...|.
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~ 44 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILK 44 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHH
Confidence 4566765 59999999777665
No 321
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=77.27 E-value=5 Score=27.35 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=25.3
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
..|..|+.+-|+-|....+.+.++.++|+
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~ 53 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP 53 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC
Confidence 56667777999999999999999998886
No 322
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=77.21 E-value=3.9 Score=31.99 Aligned_cols=31 Identities=10% Similarity=-0.196 Sum_probs=27.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|..|+-+-||.|....+.+.++.++|+
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~ 163 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP 163 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC
Confidence 4567777788999999999999999998886
No 323
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=77.11 E-value=2.3 Score=29.34 Aligned_cols=31 Identities=6% Similarity=-0.142 Sum_probs=24.4
Q ss_pred cceEEEEEecccCchhhhhHHHH---HHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNL---DKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l---~~~~~~~~ 42 (217)
.+..|..|+..-||+|....+.+ .++.+.++
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~ 64 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA 64 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT
T ss_pred CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc
Confidence 45667777789999999988887 77777765
No 324
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=78.54 E-value=0.5 Score=32.77 Aligned_cols=29 Identities=21% Similarity=-0.017 Sum_probs=24.3
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
+.|.+|+-.-||.|-...+.|.++.++|+
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~ 56 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELV 56 (143)
Confidence 67777777999999999999988877764
No 325
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=76.24 E-value=4.3 Score=26.90 Aligned_cols=31 Identities=16% Similarity=0.068 Sum_probs=25.4
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.++.|..|+-.-|+.|....+.+.++.+.|+
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~ 50 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMS 50 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhhhccC
Confidence 3556666667899999999999999988775
No 326
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=76.21 E-value=2.5 Score=30.93 Aligned_cols=40 Identities=20% Similarity=0.085 Sum_probs=31.0
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+ -.-||.|-...+.|.++.++|++ .++++..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~ 70 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK-LGVEVYS 70 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH-TTEEEEE
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH-cCCEEEE
Confidence 4467777777 89999999999999999888863 2455543
No 327
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=76.12 E-value=1.2 Score=31.74 Aligned_cols=33 Identities=6% Similarity=-0.065 Sum_probs=24.9
Q ss_pred EEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
.|.+|+-+.||+|..+...|.+ .++.++++.+.
T Consensus 3 ~itiY~~p~C~~crkak~~L~~--------~gi~~~~idi~ 35 (141)
T 1s3c_A 3 NITIYHNPASGTSRNTLEMIRN--------SGTEPTIILYL 35 (141)
T ss_dssp CCEEECCTTCHHHHHHHHHHHH--------TTCCCEEECTT
T ss_pred cEEEEECCCChHHHHHHHHHHH--------cCCCEEEEECC
Confidence 4678999999999998776652 35777776664
No 328
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=75.31 E-value=2.7 Score=29.98 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=28.0
Q ss_pred ceEEEEEeccc-CchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 13 LIRIDVSSDTV-CPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 13 ~v~i~~y~D~~-CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
+..|..|+-.. ||.|-...+.|.++.++| . ++++...
T Consensus 45 k~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~i 82 (167)
T 2jsy_A 45 KVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTI 82 (167)
T ss_dssp SCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEE
T ss_pred CeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEE
Confidence 45666666666 999999999999999888 2 5666543
No 329
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=75.21 E-value=1.7 Score=29.87 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=15.3
Q ss_pred EEEEEec-----ccCchhhhhHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
.|++|+= +.||||..+...|.
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~ 46 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR 46 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHH
Confidence 4566665 58999998777664
No 330
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=75.11 E-value=3.6 Score=31.36 Aligned_cols=30 Identities=10% Similarity=-0.101 Sum_probs=25.7
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
+..|..|+.+-||.|....+.+.++.++|+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 567777888999999999999999887764
No 331
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=75.07 E-value=2.1 Score=29.61 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=14.8
Q ss_pred EEEEEec-----ccCchhhhhHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~ 35 (217)
.|.+|+- |.||||..+...|.
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~ 46 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR 46 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHH
Confidence 4566653 78999998776554
No 332
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=74.84 E-value=2.2 Score=28.40 Aligned_cols=22 Identities=32% Similarity=0.445 Sum_probs=17.5
Q ss_pred EEEEecccCchhhhhHHHHHHH
Q 027910 16 IDVSSDTVCPWCFVGKRNLDKA 37 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~~~ 37 (217)
|.+|+..-||+|....+.|.++
T Consensus 22 vv~f~a~~C~~C~~~~~~l~~~ 43 (116)
T 2e7p_A 22 VVVFSKTYCGYCNRVKQLLTQV 43 (116)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 3448889999999988877654
No 333
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=76.80 E-value=0.61 Score=33.16 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=24.4
Q ss_pred CcceEEEEEecccCchhhhhHHHHHH-HHHhcC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDK-AIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~-~~~~~~ 42 (217)
..++.|.+|+-.-||.|-...+.+.+ +.++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~ 64 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHK 64 (159)
Confidence 44567777778899999998888887 666554
No 334
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=74.66 E-value=2.4 Score=29.19 Aligned_cols=22 Identities=9% Similarity=0.063 Sum_probs=15.9
Q ss_pred EEEEEec-----ccCchhhhhHHHHHH
Q 027910 15 RIDVSSD-----TVCPWCFVGKRNLDK 36 (217)
Q Consensus 15 ~i~~y~D-----~~CP~cy~~~~~l~~ 36 (217)
.|.+|+= +.||||..+...|.+
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~ 43 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN 43 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH
Confidence 3556655 589999998776654
No 335
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=73.97 E-value=3.4 Score=28.68 Aligned_cols=36 Identities=8% Similarity=-0.014 Sum_probs=23.1
Q ss_pred EEEEecccCchhhhhH--HHHHHHHHhcCCCCceeEEEeecc
Q 027910 16 IDVSSDTVCPWCFVGK--RNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~--~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
|.+|+-..||||-... .+.+.+++. .+|.++...+.
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~----kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEA----NKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHH----TTCCEEEEECT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHH----CCCceEEEECC
Confidence 7899999999995333 234455553 35666655554
No 336
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=73.80 E-value=2.3 Score=31.52 Aligned_cols=40 Identities=15% Similarity=-0.014 Sum_probs=30.4
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..++.|.+|+ -.-||.|-...+.|.++.++|++ .+++|..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~ 72 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE-KGFNVIG 72 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH-TTEEEEE
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEE
Confidence 4566777777 89999999999999998888763 3455543
No 337
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=73.35 E-value=4.6 Score=35.04 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=29.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+++|.+|+-+-||+|-.+.+.+.++...++ ++.+.
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~---~v~~~ 152 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP---RIKHT 152 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT---TEEEE
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC---ceEEE
Confidence 5689999999999999999999998877664 35544
No 338
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=72.56 E-value=3.9 Score=30.19 Aligned_cols=40 Identities=5% Similarity=-0.208 Sum_probs=30.4
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+ -.-||.|-...+.|.++.++|.+ .+++|..
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~ 73 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK-LGCEVLG 73 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 3456777777 88999999999999999888863 3566543
No 339
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=72.54 E-value=1.6 Score=33.36 Aligned_cols=36 Identities=6% Similarity=-0.004 Sum_probs=26.6
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCCCH-------HHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQPP-------EVYLRAFQV 214 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~~~-------~~l~~~i~~ 214 (217)
.+...+|.++||+++ +|+. .+.|..+. +.|+..|.+
T Consensus 164 l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 164 AGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp CSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 456789999999987 6763 34677664 888888764
No 340
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=71.89 E-value=4.1 Score=30.27 Aligned_cols=40 Identities=10% Similarity=-0.074 Sum_probs=30.6
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+ -.-||.|-...+.|.++.++|.+ .+++|..
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~ 75 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD-IGCEVLA 75 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-TTEEEEE
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 3456777777 88999999999999999888863 3566543
No 341
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=71.87 E-value=0.77 Score=30.83 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=23.5
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhc
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~ 41 (217)
.++.|..|+-+-||+|....+.+.++.++|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 455677888899999999999888765543
No 342
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=71.81 E-value=2.9 Score=28.33 Aligned_cols=23 Identities=13% Similarity=0.010 Sum_probs=19.7
Q ss_pred cceEEEEEecccCchhhhhHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l 34 (217)
.+..|..|+..-||+|....+.+
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~ 49 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVV 49 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHG
T ss_pred CCeEEEEEECCCCccHHHHHHHh
Confidence 46778888889999999998887
No 343
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=71.38 E-value=6.2 Score=31.57 Aligned_cols=38 Identities=11% Similarity=0.040 Sum_probs=29.7
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.++.|..|+-+-||.|....+.+.++.++|.+ .+.+..
T Consensus 35 ~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~ 72 (298)
T 3ed3_A 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAA 72 (298)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEE
Confidence 45667777789999999999999999988864 344443
No 344
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=71.36 E-value=2.1 Score=30.28 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=21.4
Q ss_pred HHHhCCCCeecEEEE---CCee--eecCCCCHHHHHHH
Q 027910 179 KKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRA 211 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv---~g~~--~~~G~~~~~~l~~~ 211 (217)
.+...|+.++|+++| +|+. ...|..+.+.....
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 445678999999866 5762 33577666554443
No 345
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=71.27 E-value=4.3 Score=30.84 Aligned_cols=41 Identities=2% Similarity=-0.095 Sum_probs=30.6
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+ ..-||.|-...+.|.++.++|.+ .+++|...
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~-~~v~vv~I 109 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS-RNCQVIAC 109 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT-TTEEEEEE
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 3455566666 69999999999999999998863 35666543
No 346
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=70.29 E-value=5.9 Score=30.33 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=26.9
Q ss_pred HHHHHhCCCCeecEEEE--CC------ee-eecCCCCHHHHHHHHHHH
Q 027910 177 ELKKYSANISGVPHFVL--NG------KH-ELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 177 ~~~a~~~gv~g~Pt~vv--~g------~~-~~~G~~~~~~l~~~i~~~ 215 (217)
.+.+.+.||.++||+++ +| .. .+.| .+.+.|.+.|.+.
T Consensus 79 ~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 79 SAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDA 125 (244)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHH
Confidence 45677899999999977 22 21 2345 5888888888764
No 347
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=70.00 E-value=3.9 Score=31.35 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=31.9
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCC
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 203 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~ 203 (217)
...+.+.++.|++-+...++.+... .......|..++|++++||+ .+.|..
T Consensus 184 ~~a~~~L~~~~i~~~~~~i~~~~~~------~~l~~~~g~~~vP~~~~~g~-~i~g~~ 234 (241)
T 1nm3_A 184 AKAKQLLHDKGLSFEEIILGHDATI------VSVRAVSGRTTVPQVFIGGK-HIGGSD 234 (241)
T ss_dssp HHHHHHHHHHTCCCEEEETTTTCCH------HHHHHHTCCSSSCEEEETTE-EEESHH
T ss_pred HHHHHHHHHcCCceEEEECCCchHH------HHHHHHhCCCCcCEEEECCE-EEECHH
Confidence 4566677778887655533322111 12234568899999999998 466653
No 348
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=69.77 E-value=1.8 Score=29.54 Aligned_cols=32 Identities=13% Similarity=-0.057 Sum_probs=23.1
Q ss_pred CcceEEEEEecccCc--------------hhhhhHHHHHHHHHhcC
Q 027910 11 KKLIRIDVSSDTVCP--------------WCFVGKRNLDKAIASSK 42 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP--------------~cy~~~~~l~~~~~~~~ 42 (217)
..+..|..|+.+-|| +|....+.+.++.++|+
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~ 65 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ 65 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc
Confidence 456778888889999 99999999888777665
No 349
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=69.75 E-value=3.6 Score=29.07 Aligned_cols=28 Identities=18% Similarity=-0.029 Sum_probs=17.5
Q ss_pred eEEEEEecc-cCchhhhhHHHHHHHHHhc
Q 027910 14 IRIDVSSDT-VCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 14 v~i~~y~D~-~CP~cy~~~~~l~~~~~~~ 41 (217)
+-|.|+.+. .||.|....|.+.++.++|
T Consensus 37 ~vv~f~~~~~~C~~C~~l~P~l~~la~~~ 65 (142)
T 2es7_A 37 GVILLSSDPRRTPEVSDNPVMIAELLREF 65 (142)
T ss_dssp EEEEECCCSCC----CCHHHHHHHHHHTC
T ss_pred EEEEEECCCCCCccHHHHHHHHHHHHHHh
Confidence 444444454 3999999999999998877
No 350
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=69.29 E-value=4 Score=28.94 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=26.7
Q ss_pred ceEEEEEecccC--chhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 13 LIRIDVSSDTVC--PWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 13 ~v~i~~y~D~~C--P~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
++-|+||.| -| +-|....|.|.++.++|.+ .+.+.
T Consensus 35 ~vlVdF~A~-wCr~gpCk~iaPvleela~e~~~--~v~~~ 71 (137)
T 2qsi_A 35 IVVLFFRGD-AVRFPEAADLAVVLPELINAFPG--RLVAA 71 (137)
T ss_dssp EEEEEECCC-TTTCTTHHHHHHHHHHHHHTSTT--TEEEE
T ss_pred cEEEEEeCC-ccCCCchhhHHhHHHHHHHHccC--CcEEE
Confidence 566676666 55 9999999999999998864 45553
No 351
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=69.21 E-value=3.7 Score=31.50 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=20.4
Q ss_pred cceEEEEEecccCchhhhhHHHHHH
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
...+|.+|+-..||+|..+...|.+
T Consensus 168 ~~~~i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 168 VQESISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp CCCCEEEEECSSCHHHHHHHHHHHH
T ss_pred ccceEEEEECCCChHHHHHHHHHHH
Confidence 4567889999999999998776653
No 352
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=69.00 E-value=4.4 Score=33.71 Aligned_cols=51 Identities=22% Similarity=0.304 Sum_probs=29.7
Q ss_pred HHHHcCCCcccc-c--ccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCCCC
Q 027910 151 CARKVGVEGAAE-F--LDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 204 (217)
Q Consensus 151 ia~~~Gld~~~~-~--l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~~~ 204 (217)
++.+.|++-..+ . +++-+-...+++.... ..|...+|.++|||+ .|.|.+.
T Consensus 281 LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~--~tG~~TVPqVFI~Gk-~IGG~Dd 334 (362)
T 2jad_A 281 LFEKLKVPRSKVLVLQLNDMKEGADIQAALYE--INGQRTVPNIYINGK-HIGGNDD 334 (362)
T ss_dssp HHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHH--HHCCCSSCEEEETTE-EEESHHH
T ss_pred HHHHcCCCcceEEEEEeccccCCHHHHHHHHH--HHCCCCcCEEEECCE-EEEChHH
Confidence 667778876544 2 2221112223333322 348889999999999 5777643
No 353
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=68.94 E-value=6 Score=30.96 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=30.0
Q ss_pred HHHHHhCCCC--eecEEEE-CCe----eee--cCCCCHHHHHHHHHHH
Q 027910 177 ELKKYSANIS--GVPHFVL-NGK----HEL--SGGQPPEVYLRAFQVA 215 (217)
Q Consensus 177 ~~~a~~~gv~--g~Pt~vv-~g~----~~~--~G~~~~~~l~~~i~~~ 215 (217)
.+.+.+.||. |+|||++ .|+ ..+ .|..+.+.|.+.|++.
T Consensus 83 ~~la~~~~V~~~~~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 83 KALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp HHHHHHTTCCTTSCCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCcCCCCeEEEEeCCcCcceeecccCCCCHHHHHHHHHHh
Confidence 4567889999 9999976 243 234 7889999999988764
No 354
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=67.76 E-value=5 Score=30.45 Aligned_cols=39 Identities=8% Similarity=-0.111 Sum_probs=29.8
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+ -.-||.|-...+.|.++.++|.+ .+++|..
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~-~~v~vv~ 95 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD-VNCEVVA 95 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH-TTEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 466777777 88999999999999999888853 3466543
No 355
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=67.70 E-value=9.1 Score=32.48 Aligned_cols=40 Identities=8% Similarity=-0.098 Sum_probs=31.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..+..|+.+-||+|....+.+.++.+.|.+..++.+..
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~ 409 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAK 409 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEE
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEE
Confidence 4667788888999999999999999999887543455543
No 356
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=67.55 E-value=4.9 Score=29.80 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=27.6
Q ss_pred HHHHHHhCCCCeecEEEE--CCe----------------eee-cC-CCCHHHHHHHHHH
Q 027910 176 EELKKYSANISGVPHFVL--NGK----------------HEL-SG-GQPPEVYLRAFQV 214 (217)
Q Consensus 176 ~~~~a~~~gv~g~Pt~vv--~g~----------------~~~-~G-~~~~~~l~~~i~~ 214 (217)
+.+.+.++||.++|||++ +|. |.+ .| ..+.+.|.+.|.+
T Consensus 92 ~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 92 VPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp CHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred CHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 556788999999999988 332 112 24 6678888887764
No 357
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=67.17 E-value=10 Score=27.48 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=29.6
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.++.|..|+-.-||.|....|.|.++.++++ ++.+..
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~ 90 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAI 90 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEE
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEE
Confidence 4677888888999999999999999887764 355543
No 358
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=66.88 E-value=3.9 Score=30.06 Aligned_cols=40 Identities=23% Similarity=0.031 Sum_probs=30.0
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
..+..|.+|+ -.-||.|-...+.|.++.++|.. .++.|..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~ 70 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE-RNVELLG 70 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-TTEEEEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 4456777777 89999999999999998888752 3466543
No 359
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=66.38 E-value=7 Score=25.90 Aligned_cols=39 Identities=10% Similarity=-0.082 Sum_probs=30.8
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+++|.+.|-..|.|--.+...-++++..|+++..+.+..
T Consensus 2 ~~~V~I~YC~~C~y~~ra~~laqeLl~~Fp~~l~V~~~l 40 (96)
T 2npb_A 2 ALAVRVVYSGACGYKPKYLQLKEKLEHEFPGCLDICGEG 40 (96)
T ss_dssp CEEEEEECCCCSCHHHHHHHHHHHHHHHSBTTEEEEECC
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHHHhCCcceEEEEEE
Confidence 578999999999999988888888999998644444443
No 360
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=66.37 E-value=8.4 Score=32.98 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=28.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..+..|+.+-||+|....+.+.++.+.|.+
T Consensus 31 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~ 62 (504)
T 2b5e_A 31 HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVE 62 (504)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcc
Confidence 46778888889999999999999999888875
No 361
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.15 E-value=6.9 Score=24.35 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 129 EELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 129 ~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
..+.+++|...... +.+.|..||+.+||+.+.+
T Consensus 17 l~~Lk~yF~~n~~P-s~eei~~LA~~lgL~~~VV 49 (71)
T 2da7_A 17 MSVLKAYYAMNMEP-NSDELLKISIAVGLPQEFV 49 (71)
T ss_dssp HHHHHHHHHHCSSC-CHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHhCCCC-CHHHHHHHHHHhCCCHHHH
Confidence 44556667766666 5788999999999997754
No 362
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=65.00 E-value=7.7 Score=27.72 Aligned_cols=37 Identities=8% Similarity=0.272 Sum_probs=26.2
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+ -.-||.|-...+.|.++.++| .++++..
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~---~~v~vv~ 84 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM---EGVDVTV 84 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC---TTEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc---CCceEEE
Confidence 344555555 688999999988888887766 2566554
No 363
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=64.99 E-value=9.5 Score=26.13 Aligned_cols=36 Identities=6% Similarity=-0.142 Sum_probs=26.5
Q ss_pred EEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEee
Q 027910 15 RIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHP 53 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p 53 (217)
.+..|++. |+-|....+.++++.++|++ .+.+.+..
T Consensus 26 v~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd 61 (133)
T 2djk_A 26 LAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTID 61 (133)
T ss_dssp EEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEEC
T ss_pred EEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEc
Confidence 44555556 99999999999999988864 46665543
No 364
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=64.53 E-value=25 Score=24.50 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeec-------EEEE-CCe--eeecCCCCH
Q 027910 144 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-------HFVL-NGK--HELSGGQPP 205 (217)
Q Consensus 144 ~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~P-------t~vv-~g~--~~~~G~~~~ 205 (217)
+.+.+.+.+++.|++.. .+.+++ .+.+...|+.++| +|+| +|+ +...|..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~--~l~D~~--------~~~~~~~gv~~~p~~g~~~~~~li~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 78 SVTSQKKFQSKQNLPYH--LLSDPK--------REFIGLLGAKKTPLSGSIRSHFIFVDGKLKFKRVKISPE 139 (159)
T ss_dssp CHHHHHHHHHHHTCSSE--EEECTT--------CHHHHHHTCBSSSSSCBCCEEEEEETTEEEEEEESCCHH
T ss_pred CHHHHHHHHHHhCCCce--EEECCc--------cHHHHHhCCcccccCCccceEEEEcCCEEEEEEccCCcc
Confidence 56677777777787532 333322 1234567888888 6777 454 223565443
No 365
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=64.27 E-value=7.3 Score=29.30 Aligned_cols=41 Identities=5% Similarity=-0.108 Sum_probs=30.6
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..+..|.+|+ -.-||.|-...+.|.++.++|.. .+++|...
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~-~~v~vv~I 88 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVAC 88 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 3456677776 88999999999999998888863 35666543
No 366
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=63.98 E-value=5.6 Score=31.43 Aligned_cols=29 Identities=14% Similarity=0.297 Sum_probs=16.8
Q ss_pred CcccCCcceEEEEEecccCchhhhhHHHH
Q 027910 6 SSSAGKKLIRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 6 ~~~~~~~~v~i~~y~D~~CP~cy~~~~~l 34 (217)
+++.....+.+.+|+.+.||+|....-.|
T Consensus 5 ~~~~~~~~~~~~Ly~~~~sp~~~~v~~~L 33 (290)
T 1z9h_A 5 VQLSLSSRLQLTLYQYKTCPFCSKVRAFL 33 (290)
T ss_dssp --------CEEEEEECTTCHHHHHHHHHH
T ss_pred cCCccCCCCCEEEEeCCCChHHHHHHHHH
Confidence 34444555678899999999998755444
No 367
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=63.78 E-value=5.3 Score=30.47 Aligned_cols=41 Identities=10% Similarity=-0.089 Sum_probs=30.4
Q ss_pred CcceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 11 KKLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 11 ~~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
..++.|.+|+ -.-||.|-...+.|.++.++|.. .+++|...
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~-~~v~vv~I 96 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN-KNVELLGI 96 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH-TTEEEEEE
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 4456666776 89999999999999998888753 35666543
No 368
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=63.74 E-value=17 Score=25.24 Aligned_cols=36 Identities=11% Similarity=0.252 Sum_probs=22.1
Q ss_pred HHHHhCCCCeecEE-EE--CCe--eeecCCCC--HHHHHHHHH
Q 027910 178 LKKYSANISGVPHF-VL--NGK--HELSGGQP--PEVYLRAFQ 213 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~-vv--~g~--~~~~G~~~--~~~l~~~i~ 213 (217)
..+...|+.++|++ +| +|+ +.+.|..+ .+.+.+.++
T Consensus 106 ~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 106 QVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 45678899999995 55 454 33467654 344444443
No 369
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=62.77 E-value=9.4 Score=28.04 Aligned_cols=14 Identities=21% Similarity=0.292 Sum_probs=11.5
Q ss_pred CCCCeecEEEE---CCe
Q 027910 183 ANISGVPHFVL---NGK 196 (217)
Q Consensus 183 ~gv~g~Pt~vv---~g~ 196 (217)
.|+.|+||+++ +|+
T Consensus 100 ~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HSCCCSSEEEEECTTSC
T ss_pred cCCCCCcceeeECCCCC
Confidence 49999999987 466
No 370
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=61.79 E-value=12 Score=27.13 Aligned_cols=39 Identities=3% Similarity=-0.068 Sum_probs=28.5
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
++-|.||+-.-||.|-...+.|.++.++|.. .++.|...
T Consensus 53 ~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~-~~~~vv~V 91 (179)
T 3ixr_A 53 WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ-INATVLGV 91 (179)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHHHHT-TTEEEEEE
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 3545555477899999999999999998874 35666543
No 371
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=60.84 E-value=14 Score=26.20 Aligned_cols=36 Identities=8% Similarity=-0.007 Sum_probs=26.3
Q ss_pred ceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 13 LIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 13 ~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+..|.+|+ -.-||.|-...+.|.++.++| . +++|..
T Consensus 44 k~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~ 80 (165)
T 1q98_A 44 KRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLC 80 (165)
T ss_dssp SEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEE
T ss_pred CeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEE
Confidence 44555554 778999999889999998887 2 566543
No 372
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=59.57 E-value=10 Score=33.00 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=28.6
Q ss_pred HHHHhCCCCeecEEEE-C-----Ce--eeecCCCCHHHHHHHHHHHh
Q 027910 178 LKKYSANISGVPHFVL-N-----GK--HELSGGQPPEVYLRAFQVAA 216 (217)
Q Consensus 178 ~~a~~~gv~g~Pt~vv-~-----g~--~~~~G~~~~~~l~~~i~~~~ 216 (217)
+.+.+.||.|+||+++ + |+ ....|..+.+.+.+.|++..
T Consensus 80 ~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 80 AVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp HHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 4567899999999977 2 22 23457788999999887653
No 373
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=57.49 E-value=13 Score=31.41 Aligned_cols=34 Identities=9% Similarity=-0.104 Sum_probs=29.1
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQ 44 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~ 44 (217)
..+..+..|+-+-|++|....+.+.++.+.+.+.
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~ 53 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI 53 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc
Confidence 3477888888899999999999999999888753
No 374
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=57.35 E-value=15 Score=30.30 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=26.5
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..+..|+-+-|++|....+.+.++.+.+.
T Consensus 22 ~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~ 52 (382)
T 2r2j_A 22 ADVALVNFYADWCRFSQMLHPIFEEASDVIK 52 (382)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 3577888888999999999999999888774
No 375
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=57.18 E-value=20 Score=25.02 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=24.8
Q ss_pred eEEEEEe-cccCchhhhhHHHHHHHHHhcCCC
Q 027910 14 IRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQ 44 (217)
Q Consensus 14 v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~ 44 (217)
+.|.+|+ -.-||.|-...+.|.++.++|.+.
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~ 68 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEY 68 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 4555544 778999999999999999988754
No 376
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=56.38 E-value=25 Score=23.58 Aligned_cols=42 Identities=12% Similarity=0.219 Sum_probs=32.4
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
..++|.+.|-..|.|--.+...-++++..|++.. ..|...|-
T Consensus 2 ~~~~V~I~YC~~C~w~~Ra~~laqeLl~tF~~~l-~~v~l~P~ 43 (105)
T 2p0g_A 2 NKAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEI-EYVALHPD 43 (105)
T ss_dssp -CEEEEEEEETTTTCHHHHHHHHHHHHHHTTTTE-EEEEEEEE
T ss_pred CCCEEEEEECCCCCChHHHHHHHHHHHHHcCccc-ceEEEEeC
Confidence 3578899999999999988888888999998643 25665554
No 377
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=56.12 E-value=6.8 Score=26.82 Aligned_cols=27 Identities=15% Similarity=0.281 Sum_probs=18.2
Q ss_pred cCCcceEEEEEecccCchhhhhHHHHH
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~~l~ 35 (217)
.......|.+|+-.-||+|..+.+.+.
T Consensus 15 ~~~~~~~LV~F~A~wC~~Ck~~~~~i~ 41 (116)
T 3dml_A 15 DDKAELRLLMFEQPGCLYCARWDAEIA 41 (116)
T ss_dssp ----CEEEEEEECTTCHHHHHHHHHTT
T ss_pred cccCCCEEEEEECCCCHHHHHHHHHHH
Confidence 344566777888889999999876443
No 378
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=55.59 E-value=14 Score=26.01 Aligned_cols=37 Identities=8% Similarity=0.012 Sum_probs=25.7
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.++.|.+|+ -.-||.|-...+.|.++.++| .++++..
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~---~~v~vv~ 79 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL---DNTVVLT 79 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC---TTEEEEE
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc---CCcEEEE
Confidence 345555555 578999999888888887766 2455543
No 379
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=55.47 E-value=16 Score=26.24 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=25.2
Q ss_pred cceEEEEEeccc-CchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTV-CPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~-CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.++.|.+|+-.. ||.|-...+.|.++.++ .++.|..
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~----~~v~vv~ 80 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA----SGATVLC 80 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH----TTCEEEE
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh----cCCEEEE
Confidence 345555666555 99999999999988876 2466553
No 380
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=55.32 E-value=32 Score=24.22 Aligned_cols=62 Identities=10% Similarity=-0.031 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHcCCCcccc-cccCc-ccchhHHHHHHHHHhCCCCe------ecEEEE-C--Ceeee-------cCCCC
Q 027910 143 GDKEFLVECARKVGVEGAAE-FLDDP-NSGLNEVHEELKKYSANISG------VPHFVL-N--GKHEL-------SGGQP 204 (217)
Q Consensus 143 ~~~~~L~~ia~~~Gld~~~~-~l~~~-~~~~~~~~~~~~a~~~gv~g------~Pt~vv-~--g~~~~-------~G~~~ 204 (217)
++.+.+.+.+++.|++ .| .+.|+ +. +.+...|+.+ +|+.+| + |+... .+..+
T Consensus 86 d~~~~~~~~~~~~~~~--~~~~l~D~~~~--------~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~ 155 (166)
T 3p7x_A 86 DLPFAQKRWCASAGLD--NVITLSDHRDL--------SFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPD 155 (166)
T ss_dssp SCHHHHHHHHHHHTCS--SCEEEECTTTC--------HHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCC
T ss_pred CCHHHHHHHHHHcCCC--ceEEccCCchh--------HHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCC
Confidence 3567778888888884 24 33333 11 2344556664 787655 4 65221 12334
Q ss_pred HHHHHHHHHH
Q 027910 205 PEVYLRAFQV 214 (217)
Q Consensus 205 ~~~l~~~i~~ 214 (217)
++.+++.|++
T Consensus 156 ~~~il~~l~~ 165 (166)
T 3p7x_A 156 FDAALAAYKN 165 (166)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 5666666654
No 381
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=54.86 E-value=10 Score=29.59 Aligned_cols=36 Identities=6% Similarity=-0.037 Sum_probs=24.6
Q ss_pred HHHhCCCCeecEEEE--CCee--eecCCC-------CHHHHHHHHHH
Q 027910 179 KKYSANISGVPHFVL--NGKH--ELSGGQ-------PPEVYLRAFQV 214 (217)
Q Consensus 179 ~a~~~gv~g~Pt~vv--~g~~--~~~G~~-------~~~~l~~~i~~ 214 (217)
.+...+|.++|||+| +|+. .+.|.. ..+.|+..|.+
T Consensus 177 l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 177 AGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp CTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 455789999999988 6752 244542 35677777764
No 382
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=54.64 E-value=18 Score=26.77 Aligned_cols=37 Identities=5% Similarity=-0.014 Sum_probs=26.4
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+ -.-||.|-...+.|.++.++| . ++.|..
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~ 115 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLC 115 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEE
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEE
Confidence 344444444 678999999999999999887 2 455543
No 383
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=54.31 E-value=9.5 Score=26.88 Aligned_cols=28 Identities=11% Similarity=0.163 Sum_probs=21.2
Q ss_pred cceEEEEEe-cccCchhhhhHHHH---HHHHH
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNL---DKAIA 39 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l---~~~~~ 39 (217)
.+..|..|+ ..-||+|....+.+ .++.+
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~ 78 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFKH 78 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHHH
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHH
Confidence 345666666 89999999999888 55544
No 384
>2jxu_A TERB, KP-TERB; tellurite resistance protein, plasmid, unknown function; NMR {Klebsiella pneumoniae ntuh-k2044}
Probab=54.29 E-value=18 Score=25.59 Aligned_cols=42 Identities=17% Similarity=0.013 Sum_probs=33.5
Q ss_pred CchHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHcCCCcccc
Q 027910 121 LDKQHNLAEELFLGYFTQG-KYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 121 ~~~~~~~~~al~~a~~~~g-~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
++....++..++.-.+.+| .+......|.+++..+|++...+
T Consensus 107 ~~~~~~~l~~~~~vA~ADG~~~~~E~~~L~~ia~~Lgl~~~~~ 149 (153)
T 2jxu_A 107 PEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPAEF 149 (153)
T ss_dssp HHHHHHHHHHHHHHHTTTTSCSSTHHHHHHHHHHHTTSCSSCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCcCHHHH
Confidence 3445667788888888898 45667899999999999998876
No 385
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=53.79 E-value=15 Score=26.58 Aligned_cols=38 Identities=5% Similarity=-0.005 Sum_probs=24.8
Q ss_pred HHHhCCCC------eecEEEE---CCee--eecCCC----CHHHHHHHHHHHh
Q 027910 179 KKYSANIS------GVPHFVL---NGKH--ELSGGQ----PPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~------g~Pt~vv---~g~~--~~~G~~----~~~~l~~~i~~~~ 216 (217)
.+...|+. ++|+++| +|+. ...|.. +.+.+.+.|+++.
T Consensus 104 ~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 104 ISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred HHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 34567777 9998866 4652 234543 5788888887653
No 386
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=53.76 E-value=11 Score=26.99 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=21.9
Q ss_pred CCeecEEEE---CCee--eecCC----------CCHHHHHHHHHHHh
Q 027910 185 ISGVPHFVL---NGKH--ELSGG----------QPPEVYLRAFQVAA 216 (217)
Q Consensus 185 v~g~Pt~vv---~g~~--~~~G~----------~~~~~l~~~i~~~~ 216 (217)
+.++||+++ +|+. .+.|. .+.+.|.+.|+++.
T Consensus 101 ~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 101 GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 367999976 4652 24564 67888888887653
No 387
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=53.00 E-value=12 Score=26.06 Aligned_cols=43 Identities=9% Similarity=0.010 Sum_probs=34.3
Q ss_pred CCchHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHcCCCcccc
Q 027910 120 GLDKQHNLAEELFLGYFTQG-KYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 120 g~~~~~~~~~al~~a~~~~g-~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
..+....+++.+++-.+.+| .+......|.+++..+|+++..+
T Consensus 80 ~~e~r~~ll~~L~~IA~ADG~i~~~E~~lLr~ia~~Lgls~~d~ 123 (133)
T 2h5n_A 80 DEERKKYVASYLGVIMASDGDIDDNELALWTLISTLCGLPTMTV 123 (133)
T ss_dssp CHHHHHHHHHHHHHHSCBTTBCCHHHHHHHHHHHHHHTCCCCCH
T ss_pred CHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34445678899999999999 35556788999999999998876
No 388
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=52.44 E-value=17 Score=26.59 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=24.8
Q ss_pred HHHhCCCC-----eecEEEE---CCee--eecCCC----CHHHHHHHHHHHh
Q 027910 179 KKYSANIS-----GVPHFVL---NGKH--ELSGGQ----PPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~-----g~Pt~vv---~g~~--~~~G~~----~~~~l~~~i~~~~ 216 (217)
.+...|+. ++|+++| +|+. ...|.. +.+++.+.|+++.
T Consensus 109 ~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 109 ISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 34567888 9997755 4652 234543 5788888887653
No 389
>1wi3_A DNA-binding protein SATB2; homeodomain, helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=52.38 E-value=17 Score=22.46 Aligned_cols=32 Identities=13% Similarity=0.284 Sum_probs=24.0
Q ss_pred HHHHHHhhc-CCCCCCHHHHHHHHHHcCCCcccc
Q 027910 130 ELFLGYFTQ-GKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 130 al~~a~~~~-g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
++.+.+|.+ +..+ |.+....++.++||+...+
T Consensus 20 ~~Lqs~f~~~~~yP-d~~~r~~La~~tGL~~~~I 52 (71)
T 1wi3_A 20 GILQSFIHDVGLYP-DQEAIHTLSAQLDLPKHTI 52 (71)
T ss_dssp HHHHHHHHHHCSCC-CHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHhcCCCC-CHHHHHHHHHHhCCCHHHH
Confidence 344455666 7766 6789999999999997764
No 390
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=51.56 E-value=9.8 Score=27.78 Aligned_cols=39 Identities=0% Similarity=-0.187 Sum_probs=27.9
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+ -.-||.|-...+.|.++.++|.+ .+++|..
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~-~~v~vv~ 69 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQK-LGVDVYS 69 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH-TTEEEEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 345555555 57899999999999998888763 3566553
No 391
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=51.48 E-value=57 Score=23.72 Aligned_cols=67 Identities=9% Similarity=-0.011 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHcCCCcc-cc-cccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeec---CCCCHHHHHHHHHHHh
Q 027910 142 IGDKEFLVECARKVGVEGA-AE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELS---GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 142 i~~~~~L~~ia~~~Gld~~-~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~---G~~~~~~l~~~i~~~~ 216 (217)
..+++.+..+++.+|++++ +. .++|. . .|...++..|+ +++.+++..... -..+..++...|+++.
T Consensus 159 Kp~~~~~~~~~~~lgi~~~~~~v~vGD~-----~-~Di~~a~~aG~---~~v~~~~~~~~~~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 159 KPSPEPVLAALTNINIEPSKEVFFIGDS-----I-SDIQSAIEAGC---LPIKYGSTNIIKDILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp TTSSHHHHHHHHHHTCCCSTTEEEEESS-----H-HHHHHHHHTTC---EEEEECC-----CCEEESSHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHcCCCcccCEEEEcCC-----H-HHHHHHHHCCC---eEEEECCCCCCCCceeeCCHHHHHHHHHHHh
Confidence 3467889999999999988 66 66664 3 67777888875 556675431111 1346788888888765
Q ss_pred C
Q 027910 217 N 217 (217)
Q Consensus 217 ~ 217 (217)
+
T Consensus 230 ~ 230 (231)
T 3kzx_A 230 N 230 (231)
T ss_dssp C
T ss_pred c
Confidence 3
No 392
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=50.98 E-value=62 Score=22.81 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCe----------ec-EEEEC--Ceee--e-----cC
Q 027910 142 IGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISG----------VP-HFVLN--GKHE--L-----SG 201 (217)
Q Consensus 142 i~~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g----------~P-t~vv~--g~~~--~-----~G 201 (217)
.++.+.+.+.+++.|++-. .+.|++ .+.+.+.|+.+ .| ||+|| |+.. . .+
T Consensus 75 ~d~~~~~~~~~~~~~~~fp--~l~D~~--------~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~ 144 (164)
T 4gqc_A 75 VDSPWCLKKFKDENRLAFN--LLSDYN--------REVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLN 144 (164)
T ss_dssp SSCHHHHHHHHHHTTCCSE--EEECTT--------SHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTC
T ss_pred CCCHHHHHHHHHhcCcccc--eeecCc--------hHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCC
Confidence 3456777778888887532 444432 12345566643 34 46775 6521 1 12
Q ss_pred CCCHHHHHHHHHHHh
Q 027910 202 GQPPEVYLRAFQVAA 216 (217)
Q Consensus 202 ~~~~~~l~~~i~~~~ 216 (217)
..+++++++.|++++
T Consensus 145 ~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 145 EPDYDEVVREANKIA 159 (164)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 335788888887764
No 393
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=50.95 E-value=21 Score=26.78 Aligned_cols=23 Identities=17% Similarity=0.062 Sum_probs=18.1
Q ss_pred ceEEEEEecccCchhhhhHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~ 35 (217)
+.++.+|+...||+|....-.|.
T Consensus 21 ~~~~~Ly~~~~sp~~~~v~~~L~ 43 (241)
T 3vln_A 21 EGSIRIYSMRFSPFAERTRLVLK 43 (241)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCcHHHHHHHHHH
Confidence 55788899999999998665554
No 394
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=50.87 E-value=16 Score=28.35 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=18.6
Q ss_pred cCchhhhhHHHHHHHHHhcCCCCceeE
Q 027910 23 VCPWCFVGKRNLDKAIASSKDQYDFEI 49 (217)
Q Consensus 23 ~CP~cy~~~~~l~~~~~~~~~~~~v~v 49 (217)
.||||- ..|.+.++.+.|....++.|
T Consensus 32 ~~pWCg-l~P~~e~lA~~~~~~~~v~~ 57 (240)
T 2qc7_A 32 QYPYGE-KQDEFKRLAENSASSDDLLV 57 (240)
T ss_dssp SSCCSH-HHHHHHHHHHHHTTCTTEEE
T ss_pred CCCCCc-chHHHHHHHHHhcCCCCeEE
Confidence 479998 88999998888764223444
No 395
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=50.62 E-value=17 Score=27.40 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=17.4
Q ss_pred ceEEEEEecccCchhhhhHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l 34 (217)
+-++..|+...||+|....-.|
T Consensus 21 ~~~~~Ly~~~~sp~~~~v~~~L 42 (239)
T 3q18_A 21 EGLIRIYSMRFCPYSHRTRLVL 42 (239)
T ss_dssp TTCEEEEECTTCHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHHHHHHH
Confidence 4578889999999999865544
No 396
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=50.47 E-value=44 Score=22.32 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=32.4
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
...+|.+.|-..|.|--.+...-++++..|++... +|...|-
T Consensus 4 ~~p~V~I~YC~~C~~~~Ra~~laqeLl~tF~~~l~-~v~l~P~ 45 (104)
T 2oka_A 4 AKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLG-KVCLEPG 45 (104)
T ss_dssp CCCEEEEEEETTTTCHHHHHHHHHHHHHHSTTTCS-EEEEEEE
T ss_pred CCCEEEEEECCCCCChHHHHHHHHHHHHHcCcccc-eEEEEeC
Confidence 35678888889999999888888889999986432 5666664
No 397
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=49.87 E-value=13 Score=31.81 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=26.0
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
.+..|..|+-+-||+|....+.+.++.+.|+
T Consensus 376 ~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~ 406 (504)
T 2b5e_A 376 KKDVLVLYYAPWCGHCKRLAPTYQELADTYA 406 (504)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHHhHHHHHHHHHhh
Confidence 4556777778999999999999999888775
No 398
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=49.72 E-value=8.8 Score=27.48 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=21.1
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIA 39 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~ 39 (217)
++.|..|+-.-||+|....+.+.++.+
T Consensus 47 k~vlv~F~a~WC~~C~~~~p~l~~~~~ 73 (164)
T 1sen_A 47 LPLMVIIHKSWCGACKALKPKFAESTE 73 (164)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHTCHH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHH
Confidence 456666677999999999998887543
No 399
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=48.93 E-value=16 Score=23.40 Aligned_cols=26 Identities=4% Similarity=0.064 Sum_probs=22.0
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|+.+ +.+.|..+|..+|++++.+
T Consensus 57 iE~G~~~-s~~~l~kIa~~L~v~~~~L 82 (88)
T 3t76_A 57 LGKNENV-SLTVLLAICEYLNCDFGDI 82 (88)
T ss_dssp HHTTCCC-CHHHHHHHHHHHTCCGGGT
T ss_pred HHcCCCc-CHHHHHHHHHHHCcCHHHH
Confidence 4567666 8999999999999999876
No 400
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=48.46 E-value=18 Score=21.56 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=22.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 41 ~e~g~~~~~~~~l~~ia~~l~v~~~~l 67 (73)
T 3omt_A 41 WCTNDVQPSLETLFDIAEALNVDVREL 67 (73)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGGGG
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 456665568899999999999998876
No 401
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.55 E-value=30 Score=25.39 Aligned_cols=35 Identities=11% Similarity=0.262 Sum_probs=27.1
Q ss_pred HhCCCCeecEEEE-C---Ce----eeecCCCCHHHHHHHHHHH
Q 027910 181 YSANISGVPHFVL-N---GK----HELSGGQPPEVYLRAFQVA 215 (217)
Q Consensus 181 ~~~gv~g~Pt~vv-~---g~----~~~~G~~~~~~l~~~i~~~ 215 (217)
+.+++.++|+++| . ++ ..+.|..++++|...|.++
T Consensus 124 ~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 124 RTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp HHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred hhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 4589999999976 2 22 2468999999999988765
No 402
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=46.46 E-value=35 Score=24.72 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=25.5
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
++.|.-|+-.-||-|....|.|.++.++|.+
T Consensus 42 k~VVVdF~A~WCgPCk~m~PvleelA~e~~~ 72 (160)
T 2av4_A 42 RLVCIRFGHDYDPDCMKMDELLYKVADDIKN 72 (160)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHccC
Confidence 4555556668999999999999999998864
No 403
>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}
Probab=45.56 E-value=44 Score=26.27 Aligned_cols=28 Identities=7% Similarity=-0.006 Sum_probs=16.0
Q ss_pred cccCCcceEEEEEecc---------cCchhhhhHHHH
Q 027910 7 SSAGKKLIRIDVSSDT---------VCPWCFVGKRNL 34 (217)
Q Consensus 7 ~~~~~~~v~i~~y~D~---------~CP~cy~~~~~l 34 (217)
+|.......|..|... .||||....-.|
T Consensus 11 ~~~~~~~~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L 47 (291)
T 2yv9_A 11 NGDPQSKPLLELYVKASGIDARRIGADLFCQEFWMEL 47 (291)
T ss_dssp CCCGGGSCEEEEEEEBCSSCTTSBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEEecCCCCcCccCcChHHHHHHHHH
Confidence 4444333345555433 499998765544
No 404
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=45.28 E-value=33 Score=23.72 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCC----eec---EEEEC--Cee--eecCCC----CHH
Q 027910 142 IGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANIS----GVP---HFVLN--GKH--ELSGGQ----PPE 206 (217)
Q Consensus 142 i~~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~----g~P---t~vv~--g~~--~~~G~~----~~~ 206 (217)
+++.+.+.+.+++.|++.. .+.+.. .+...+...|+. |+| +|+|+ |+. ...|.. ..+
T Consensus 78 ~d~~~~~~~~~~~~~~~~~--~~~d~~------~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~ 149 (160)
T 1xvw_A 78 VGPPPTHKIWATQSGFTFP--LLSDFW------PHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQR 149 (160)
T ss_dssp SCCHHHHHHHHHHHTCCSC--EEECTT------TTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHH
T ss_pred CCCHHHHHHHHHhcCCCce--EEecCC------cChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHH
Confidence 4567888889888888533 222210 011235678888 999 77774 652 234543 456
Q ss_pred HHHHHHHHH
Q 027910 207 VYLRAFQVA 215 (217)
Q Consensus 207 ~l~~~i~~~ 215 (217)
.+.+.|+++
T Consensus 150 ~l~~~l~~l 158 (160)
T 1xvw_A 150 LWTDALAAL 158 (160)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 777777654
No 405
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=45.05 E-value=23 Score=20.77 Aligned_cols=27 Identities=22% Similarity=0.145 Sum_probs=21.0
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.+..++..+|++++.+
T Consensus 43 ~e~g~~~~~~~~l~~la~~l~v~~~~l 69 (71)
T 2ewt_A 43 YERGDRAVTVQRLAELADFYGVPVQEL 69 (71)
T ss_dssp HHHTCSCCCHHHHHHHHHHHTSCGGGG
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 455655557899999999999988764
No 406
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=44.98 E-value=28 Score=26.65 Aligned_cols=38 Identities=5% Similarity=-0.067 Sum_probs=27.6
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+-|.||.-.-||.|-...+.|.++.++|.+ .++.|..
T Consensus 79 ~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~-~gv~vv~ 116 (240)
T 3qpm_A 79 YLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA-INTEVVA 116 (240)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHHHHHHHT-TTEEEEE
T ss_pred EEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 3444444448899999999999999998874 3566543
No 407
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=44.61 E-value=34 Score=25.60 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=25.2
Q ss_pred HHHhCCCC------eecEEEE---CCee--eecCC----CCHHHHHHHHHHHh
Q 027910 179 KKYSANIS------GVPHFVL---NGKH--ELSGG----QPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~------g~Pt~vv---~g~~--~~~G~----~~~~~l~~~i~~~~ 216 (217)
.+...|+. ++|+++| +|+. ...|. ...+++++.|+++.
T Consensus 132 i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 132 ISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 35677888 9999877 4652 22343 45688888887653
No 408
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=44.30 E-value=23 Score=32.13 Aligned_cols=33 Identities=0% Similarity=-0.259 Sum_probs=27.9
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
..+..+..|+.+-||+|....+.+.++.+.+.+
T Consensus 132 ~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~ 164 (780)
T 3apo_A 132 SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG 164 (780)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC
Confidence 346678888889999999999999999888764
No 409
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=43.94 E-value=76 Score=21.81 Aligned_cols=65 Identities=12% Similarity=0.039 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCe------------ecEEEE---CCeee--ecCCC
Q 027910 141 YIGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISG------------VPHFVL---NGKHE--LSGGQ 203 (217)
Q Consensus 141 ~i~~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g------------~Pt~vv---~g~~~--~~G~~ 203 (217)
.+++.+.+.+.+++.|++.. .+.+++ .+.+...|+.+ +|+.+| +|+.. ..|..
T Consensus 76 s~d~~~~~~~~~~~~~~~~~--~~~d~~--------~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~ 145 (163)
T 3gkn_A 76 SRDSVKSHDNFCAKQGFAFP--LVSDGD--------EALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVK 145 (163)
T ss_dssp ESSCHHHHHHHHHHHCCSSC--EEECTT--------CHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCC
T ss_pred eCCCHHHHHHHHHHhCCCce--EEECCc--------HHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCC
Confidence 34578999999999888643 333322 13455677876 897765 46522 23433
Q ss_pred C---HHHHHHHHHHH
Q 027910 204 P---PEVYLRAFQVA 215 (217)
Q Consensus 204 ~---~~~l~~~i~~~ 215 (217)
. .+++.+.|+++
T Consensus 146 ~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 146 VAGHADAVLAALKAH 160 (163)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHH
Confidence 3 45666666654
No 410
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=43.93 E-value=40 Score=22.72 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=31.8
Q ss_pred CcceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
...++|.+.|-..|-|--.+...-++++..|+++. .+|...|-
T Consensus 6 ~~~~~V~I~YC~~C~w~lRa~~laqeLl~tF~~~l-~eV~L~P~ 48 (108)
T 2ojl_A 6 DHPPRIAIQYCTQCQWLLRAAWMAQELLSTFGADL-GEVALVPG 48 (108)
T ss_dssp -CCCEEEEEEETTTTCHHHHHHHHHHHHHHHGGGS-SEEEEEEE
T ss_pred CCCCEEEEEECCCCCChHHHHHHHHHHHHhcCccc-ceEEEEeC
Confidence 34678888889999999888887888888887543 35666663
No 411
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=43.66 E-value=25 Score=25.89 Aligned_cols=35 Identities=6% Similarity=0.115 Sum_probs=26.4
Q ss_pred ccCCcceEEEEEe----c--ccCchhhhhHHHHHHHHHhcC
Q 027910 8 SAGKKLIRIDVSS----D--TVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 8 ~~~~~~v~i~~y~----D--~~CP~cy~~~~~l~~~~~~~~ 42 (217)
+++..++-|+|+. + .-|+-|....+.++++-++|.
T Consensus 34 ~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 34 GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 3444556666666 2 589999999999999988774
No 412
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=43.54 E-value=17 Score=28.21 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=15.4
Q ss_pred EEEEEecccCchhhhhHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l 34 (217)
.+..|+.+.||||....-.|
T Consensus 6 ~~~LY~~~~sP~~~rv~i~L 25 (265)
T 4g10_A 6 ELTIYHIPGCPFSERVEIML 25 (265)
T ss_dssp CCEEEECTTCHHHHHHHHHH
T ss_pred ceEEEecCCChHHHHHHHHH
Confidence 56778899999998765444
No 413
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=43.52 E-value=18 Score=26.53 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=29.4
Q ss_pred CcceEEEEEecccCchhhh-hHHHHHHHHHhcCCCCcee-EE
Q 027910 11 KKLIRIDVSSDTVCPWCFV-GKRNLDKAIASSKDQYDFE-IR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~-~~~~l~~~~~~~~~~~~v~-v~ 50 (217)
.+++.|.+|.---||.|-. -.+.+.++.++|++ .++. |.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv 96 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA-RGVDDIA 96 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT-TTCCEEE
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH-cCCCEEE
Confidence 3457777787889999998 58889988888863 3566 54
No 414
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=43.44 E-value=27 Score=21.29 Aligned_cols=27 Identities=11% Similarity=-0.132 Sum_probs=22.3
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|+..-+.+.+..++..+|++++.+
T Consensus 45 ~e~g~~~~~~~~~~~ia~~l~v~~~~l 71 (80)
T 3kz3_A 45 LFNGINALNAYNAALLAKILKVSVEEF 71 (80)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGGGT
T ss_pred HHcCCCCCCHHHHHHHHHHhCCCHHHH
Confidence 556766667899999999999998876
No 415
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=43.29 E-value=29 Score=20.63 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=21.6
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 43 ~e~g~~~~~~~~l~~ia~~l~~~~~~l 69 (76)
T 3bs3_A 43 WCSNKSQPSLDMLVKVAELLNVDPRQL 69 (76)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGGGG
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 455655557899999999999998876
No 416
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*
Probab=43.29 E-value=11 Score=28.10 Aligned_cols=24 Identities=8% Similarity=-0.112 Sum_probs=14.1
Q ss_pred cCCcceEEEEEecccCchhhhhHH
Q 027910 9 AGKKLIRIDVSSDTVCPWCFVGKR 32 (217)
Q Consensus 9 ~~~~~v~i~~y~D~~CP~cy~~~~ 32 (217)
+.|..-.+..|+.+.||+|....-
T Consensus 6 ~~m~~~~~~Ly~~~~sp~~~~v~~ 29 (223)
T 2cz2_A 6 SGMQAGKPILYSYFRSSCSWRVRI 29 (223)
T ss_dssp -----CCCEEEECTTCHHHHHHHH
T ss_pred cccccCceEEEecCCCChHHHHHH
Confidence 334333567788889999986543
No 417
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=43.28 E-value=13 Score=26.38 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=26.4
Q ss_pred cceEEEEEecccCchhh-hhHHHHHHHHHhcCCCCcee-EE
Q 027910 12 KLIRIDVSSDTVCPWCF-VGKRNLDKAIASSKDQYDFE-IR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy-~~~~~l~~~~~~~~~~~~v~-v~ 50 (217)
+++-|.+|.-.-||.|- .-.+.+.++.++|.+ .+++ |.
T Consensus 36 k~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~-~~v~~vv 75 (162)
T 1tp9_A 36 KKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS-KGVTEIL 75 (162)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH-TTCCCEE
T ss_pred CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEE
Confidence 34444444477899999 788889888887753 3566 54
No 418
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=43.18 E-value=35 Score=27.48 Aligned_cols=38 Identities=13% Similarity=-0.119 Sum_probs=30.5
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
+..+.+|++..|+.|-...+.++++.++|++ .+.+.+.
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~v 173 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFI 173 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEE
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEe
Confidence 4567889999999999999999999988875 3555543
No 419
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=43.08 E-value=23 Score=26.04 Aligned_cols=20 Identities=10% Similarity=-0.047 Sum_probs=15.1
Q ss_pred EEEEEecccCchhhhhHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l 34 (217)
.+..|+.+.||+|....-.|
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L 29 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVL 29 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHH
T ss_pred ceEEEcCCCChhHHHHHHHH
Confidence 47888889999998755433
No 420
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=42.86 E-value=17 Score=26.08 Aligned_cols=38 Identities=11% Similarity=-0.116 Sum_probs=26.9
Q ss_pred cceEEEEEecccCchhhh-hHHHHHHHHHhcCCCCce-eEE
Q 027910 12 KLIRIDVSSDTVCPWCFV-GKRNLDKAIASSKDQYDF-EIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~-~~~~l~~~~~~~~~~~~v-~v~ 50 (217)
+++-|.+|.---||.|-. -.+.+.++.++|.+ .++ .|.
T Consensus 32 k~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv 71 (167)
T 2wfc_A 32 KKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG-KGVDIIA 71 (167)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH-TTCCEEE
T ss_pred CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEE
Confidence 345555555778999998 88888888877753 356 554
No 421
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=42.69 E-value=32 Score=29.55 Aligned_cols=31 Identities=16% Similarity=0.020 Sum_probs=26.1
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
++.|..|+-+-||.|....+.+.++.++|..
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~ 73 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKV 73 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCC
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhh
Confidence 4557777778999999999999999998863
No 422
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=42.68 E-value=19 Score=26.53 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=14.3
Q ss_pred EEEEecccCchhhhhHHHH
Q 027910 16 IDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l 34 (217)
+..|..+.||||....-.|
T Consensus 4 m~LY~~~~sP~~~rvr~~L 22 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVL 22 (210)
T ss_dssp CEEEECTTCHHHHHHHHHH
T ss_pred EEEecCCCChHHHHHHHHH
Confidence 4568899999999755433
No 423
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=42.65 E-value=8.9 Score=27.70 Aligned_cols=36 Identities=14% Similarity=0.004 Sum_probs=27.9
Q ss_pred cceEEEEEecccCchhhhh-HHHHHHHHHhcCCCCcee
Q 027910 12 KLIRIDVSSDTVCPWCFVG-KRNLDKAIASSKDQYDFE 48 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~-~~~l~~~~~~~~~~~~v~ 48 (217)
+++.|.+|.-.-||.|-.- .+.+.++.++|.. .++.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~-~g~~ 80 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA-KGVD 80 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH-TTCS
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH-CCCC
Confidence 4678888888999999987 7888888777753 3555
No 424
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=42.25 E-value=30 Score=20.38 Aligned_cols=27 Identities=11% Similarity=0.062 Sum_probs=21.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 46 ~e~g~~~~~~~~l~~l~~~l~~~~~~l 72 (74)
T 1y7y_A 46 VERGQRNVSLVNILKLATALDIEPREL 72 (74)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTSCGGGG
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHHHH
Confidence 456665557889999999999988754
No 425
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=42.13 E-value=34 Score=24.75 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=24.3
Q ss_pred HHHhCCCC-----eecEEEE---CCee--eecCC----CCHHHHHHHHHHHh
Q 027910 179 KKYSANIS-----GVPHFVL---NGKH--ELSGG----QPPEVYLRAFQVAA 216 (217)
Q Consensus 179 ~a~~~gv~-----g~Pt~vv---~g~~--~~~G~----~~~~~l~~~i~~~~ 216 (217)
.+...|+. ++|+++| +|+. ...|. ...+++++.|+++.
T Consensus 107 ~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 107 IARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 45567887 8998866 4652 22343 24788888887653
No 426
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=41.94 E-value=18 Score=26.73 Aligned_cols=21 Identities=14% Similarity=0.463 Sum_probs=16.0
Q ss_pred EEEEEecccCchhhhhHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~ 35 (217)
++..|+.+.||+|....-.|.
T Consensus 3 ~~~Ly~~~~sp~~~~v~~~l~ 23 (218)
T 3ir4_A 3 AMKLYIYDHCPFCVKARMIFG 23 (218)
T ss_dssp CCEEEECTTCHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHH
Confidence 367888899999998665443
No 427
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=41.54 E-value=31 Score=26.01 Aligned_cols=63 Identities=14% Similarity=0.016 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc-------cccCcccchhHHHHHHHH-HhCCCCeec
Q 027910 127 LAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE-------FLDDPNSGLNEVHEELKK-YSANISGVP 189 (217)
Q Consensus 127 ~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~-------~l~~~~~~~~~~~~~~~a-~~~gv~g~P 189 (217)
=+.++|..|-....+.-+.+-+..+++++|++++.+ .++.+....--+++.-.+ .++|+..++
T Consensus 8 ~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~ 78 (199)
T 3kev_A 8 AILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLE 78 (199)
T ss_dssp HHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHH
T ss_pred HHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHH
Confidence 457788877532222335899999999999999875 345555444444444443 455554433
No 428
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=41.18 E-value=91 Score=23.31 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHc----CCCcccc-cccCcccchhHHHHHHHHHhCCC-----CeecEEEE---CCee--eecC----C
Q 027910 142 IGDKEFLVECARKV----GVEGAAE-FLDDPNSGLNEVHEELKKYSANI-----SGVPHFVL---NGKH--ELSG----G 202 (217)
Q Consensus 142 i~~~~~L~~ia~~~----Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv-----~g~Pt~vv---~g~~--~~~G----~ 202 (217)
+++.+.+.+.+++. |++.-.+ .+.|+. .+.+...|+ ..+|+.+| +|+. ...| .
T Consensus 98 ~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--------~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~ 169 (221)
T 2c0d_A 98 VDSVYSHLAWKNMPIEKGGIGNVEFTLVSDIN--------KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIG 169 (221)
T ss_dssp SSCHHHHHHHHHSCGGGTCCCSCSSEEEECTT--------SHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCC
T ss_pred CCCHHHHHHHHHHhhhhcCccCCceEEEECCc--------hHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 45677788888776 4432234 333321 123456677 46898765 4652 2234 2
Q ss_pred CCHHHHHHHHHHHh
Q 027910 203 QPPEVYLRAFQVAA 216 (217)
Q Consensus 203 ~~~~~l~~~i~~~~ 216 (217)
.+.+++++.|+++.
T Consensus 170 ~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 170 RNVQEVLRTIDSII 183 (221)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 45788888887653
No 429
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=40.77 E-value=33 Score=23.25 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=29.1
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
.+..+.+|+..-||=|..+.+.++++.++ .++.+.+.
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~----~~v~~~~v 60 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE----RDMDGYYL 60 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH----HTCCEEEE
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc----CCceEEEE
Confidence 46778888899999999999999998763 24555544
No 430
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=39.86 E-value=26 Score=20.06 Aligned_cols=27 Identities=11% Similarity=0.064 Sum_probs=21.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 34 ~e~g~~~~~~~~l~~i~~~l~~~~~~l 60 (66)
T 2xi8_A 34 IEKNKYNPSLQLALKIAYYLNTPLEDI 60 (66)
T ss_dssp HHTTSCCCCHHHHHHHHHHTTSCHHHH
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 445655457899999999999998876
No 431
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=39.73 E-value=18 Score=26.77 Aligned_cols=18 Identities=17% Similarity=0.026 Sum_probs=14.4
Q ss_pred eEEEEEecccCchhhhhH
Q 027910 14 IRIDVSSDTVCPWCFVGK 31 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~ 31 (217)
|++..|+.+.||+|....
T Consensus 1 M~mkLY~~~~S~~~~~v~ 18 (216)
T 3vk9_A 1 MTIDLYYVPGSAPCRAVL 18 (216)
T ss_dssp CCCEEEECTTCHHHHHHH
T ss_pred CCEEEEeCCCChhHHHHH
Confidence 457889999999998644
No 432
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=39.51 E-value=14 Score=25.41 Aligned_cols=39 Identities=15% Similarity=0.323 Sum_probs=27.5
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCc-eeEEEeecc
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYD-FEIRWHPFF 55 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~-v~v~~~p~~ 55 (217)
+-+|..|.-|.||-|-..+..|.++.. +++ ++|.-..|+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~led----eY~ilrVNIlSfF 41 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKS----EYDILHVDILSFF 41 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTT----TEEEEEEECCCCC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhc----cccEEEEEeeeee
Confidence 458899999999999999988854433 443 455544444
No 433
>2php_A Uncharacterized protein MJ0236; chlorine ION, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.03A {Methanocaldococcus jannaschii DSM2661} SCOP: c.74.1.2
Probab=39.18 E-value=62 Score=24.17 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=56.4
Q ss_pred CCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc-cccCcc-cchhHHHHHHHH
Q 027910 103 TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE-FLDDPN-SGLNEVHEELKK 180 (217)
Q Consensus 103 ~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~-~l~~~~-~~~~~~~~~~~a 180 (217)
+..|....++++.+.+.+++. .-..||--.+.+.+.+++ |++...+ .-+.|+ ... +.=....+
T Consensus 73 FGaS~H~Ar~lL~a~~~~P~i-------------RsaiNIry~~~i~~~l~~-g~~v~~~dr~~ePee~~t-m~W~i~~a 137 (192)
T 2php_A 73 FGASEHIAKIILSASKFNPEI-------------RACMNIKYDGGLIKLLKD-KFAVSSFDRKEEPPNVST-MEWGTKIA 137 (192)
T ss_dssp ETSCHHHHHHHHHHHTTCTTC-------------CEEEEECCCHHHHHHHTT-TSCEEECCGGGCCTTSCH-HHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhCCCc-------------eEEEEEecCHHHHHHHHc-CCeEEEECCCCCCcccch-hhHHHHHH
Confidence 467777778888888877720 112456666788888888 9988777 333333 222 11122223
Q ss_pred -HhCCCCeecEEEEC----Ce---eeecCCCCHHHHHHHH
Q 027910 181 -YSANISGVPHFVLN----GK---HELSGGQPPEVYLRAF 212 (217)
Q Consensus 181 -~~~gv~g~Pt~vv~----g~---~~~~G~~~~~~l~~~i 212 (217)
.+.| ++|-++++ |+ ..+.|..+.+...+++
T Consensus 138 ~~~~~--~~PdvIyd~G~~GkEP~i~vfG~dp~ev~~kv~ 175 (192)
T 2php_A 138 CEKFG--GVPDIIYDRGGEGKEPMIRVLGRDAIEVVKKVE 175 (192)
T ss_dssp HHHHT--SCCSEEEECCBBTBCCEEEEEESSHHHHHHHHH
T ss_pred HHhcC--CCCeEEEeCCCCCcCcEEEEECCCHHHHHHHHH
Confidence 3333 69999995 32 2367887766665554
No 434
>2pb9_A Phosphomethylpyrimidine kinase; phosphate, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.70A {Pyrococcus furiosus} SCOP: c.74.1.2
Probab=39.03 E-value=40 Score=25.29 Aligned_cols=95 Identities=15% Similarity=0.064 Sum_probs=55.7
Q ss_pred CCCcHHHHHHHHHHhhcCCchHHHHHHHHHHHHhhcCCCCCCHHH----HHHHHHHcCCCcccc-cccCcc-cchh----
Q 027910 103 TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEF----LVECARKVGVEGAAE-FLDDPN-SGLN---- 172 (217)
Q Consensus 103 ~~~s~~a~~~~~~a~~~g~~~~~~~~~al~~a~~~~g~~i~~~~~----L~~ia~~~Gld~~~~-~l~~~~-~~~~---- 172 (217)
+..|....++++.+.+.+++. .-..||--.+. +.+.++++|++...+ .-+.|+ ++..
T Consensus 72 FGaS~H~Ar~lL~a~~~~P~i-------------RsaiNIry~~~~~~~i~~~l~~~g~~v~~~dr~~ePeev~~~eg~t 138 (195)
T 2pb9_A 72 FGASDHLARAVLTYMRFYPEY-------------RSAINIRYSREIIEEIIEIAQERGFKVSFYDRREEPEEIKAKEGAT 138 (195)
T ss_dssp ETCCSHHHHHHHHHHTTCTTC-------------CEEEEECCCHHHHHHHHHHHHHTTCEEEECCGGGSCHHHHHSTTCH
T ss_pred CCCcHHHHHHHHHHHHhCCCc-------------eEEEEEeechhhhHHHHHHHHHcCCeEEEECCccCchhhhhccccc
Confidence 456666778888888777610 11235555566 888899999987766 333332 2221
Q ss_pred HHHHHHHH-HhCCCCeecEEEEC----Ce---eeecCCCCHHHHHHHH
Q 027910 173 EVHEELKK-YSANISGVPHFVLN----GK---HELSGGQPPEVYLRAF 212 (217)
Q Consensus 173 ~~~~~~~a-~~~gv~g~Pt~vv~----g~---~~~~G~~~~~~l~~~i 212 (217)
+.=-...+ .+.| ++|-++++ |+ ..+.|..+.+...+++
T Consensus 139 m~Wgi~~a~~~~~--~~PdvIyd~G~~GkEP~i~vfG~dp~ev~~kv~ 184 (195)
T 2pb9_A 139 IPWGIETAIKRIK--ERPDIIYHLGDVGKEPMILVFGRNPREVLEKIK 184 (195)
T ss_dssp HHHHHHHHHHHSS--SCEEEEEECCBTTBCCEEEEEESSHHHHHHHHH
T ss_pred chHHHHHHHHhcC--CCCeEEEeCCCCCCCcEEEEECCCHHHHHHHHH
Confidence 11112223 3343 79999995 33 2468887777666554
No 435
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=38.79 E-value=19 Score=27.64 Aligned_cols=62 Identities=13% Similarity=0.020 Sum_probs=37.7
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc-------cccCcccchhHHHHHHHH-HhCCCCeec
Q 027910 128 AEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE-------FLDDPNSGLNEVHEELKK-YSANISGVP 189 (217)
Q Consensus 128 ~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~-------~l~~~~~~~~~~~~~~~a-~~~gv~g~P 189 (217)
++++|..|-..+.|.-..+-+..+++.+|++++.+ .+..+....--+++.-.+ .++|+..++
T Consensus 8 l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~ 77 (221)
T 4gba_A 8 LEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSID 77 (221)
T ss_dssp HHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHH
T ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHH
Confidence 56777776544444446889999999999999875 345554433333443333 344554433
No 436
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=38.72 E-value=46 Score=26.79 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCee----c-EEEEC--Cee--eecCC---CCHHH
Q 027910 140 KYIGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGV----P-HFVLN--GKH--ELSGG---QPPEV 207 (217)
Q Consensus 140 ~~i~~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~----P-t~vv~--g~~--~~~G~---~~~~~ 207 (217)
.+.++.+.+.+.+++.|++-. .+.|++ .+.+...||.+- | ||+|| |+. ...+. ...++
T Consensus 60 is~D~~~~~~~f~~~~~l~fp--~l~D~~--------~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~ 129 (322)
T 4eo3_A 60 ISRDSVEALKRFKEKNDLKVT--LLSDPE--------GILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQE 129 (322)
T ss_dssp EESCCHHHHHHHHHHHTCCSE--EEECTT--------CHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHH
T ss_pred EeCCCHHHHHHHHHhhCCceE--EEEcCc--------hHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHH
Confidence 345578888888999898533 455543 234556788653 3 56775 642 22333 34677
Q ss_pred HHHHHHHH
Q 027910 208 YLRAFQVA 215 (217)
Q Consensus 208 l~~~i~~~ 215 (217)
+++.|+++
T Consensus 130 ~l~~~~~~ 137 (322)
T 4eo3_A 130 VKEALDRL 137 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 77777765
No 437
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=38.09 E-value=39 Score=29.33 Aligned_cols=32 Identities=9% Similarity=-0.062 Sum_probs=27.1
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCC
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKD 43 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~ 43 (217)
.+..|..|+-.-||.|....+.+.++.++|.+
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~ 61 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKD 61 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC
Confidence 36677777788999999999999999988863
No 438
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=37.82 E-value=56 Score=21.83 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=30.8
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEeec
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWHPF 54 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~ 54 (217)
.++|.+.|-..|.|--.+...-++++..|++.. .+|...|-
T Consensus 7 ~~~V~I~YC~~C~~~~Ra~~laqeLl~tF~~~l-~~V~l~P~ 47 (105)
T 2fa8_A 7 KPRIAIRYCTQCNWLLRAGWMAQEILQTFASDI-GEVSLIPS 47 (105)
T ss_dssp CCEEEEEEETTTTCHHHHHHHHHHHHHHHGGGC-SEEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCccc-ceEEEEcC
Confidence 577888889999998888887888888887532 25555553
No 439
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=37.69 E-value=23 Score=26.94 Aligned_cols=22 Identities=27% Similarity=0.226 Sum_probs=16.2
Q ss_pred eEEEEE--------ecccCchhhhhHHHHH
Q 027910 14 IRIDVS--------SDTVCPWCFVGKRNLD 35 (217)
Q Consensus 14 v~i~~y--------~D~~CP~cy~~~~~l~ 35 (217)
..|++| +...||||....-.|.
T Consensus 12 ~~i~ly~~~~~~~~~~~~sp~~~rv~~~L~ 41 (247)
T 2r4v_A 12 PEIELFVKAGSDGESIGNCPFCQRLFMILW 41 (247)
T ss_dssp CCEEEEEEBCTTSSSBCSCHHHHHHHHHHH
T ss_pred CCEEEEEecCcccccCCCChhHHHHHHHHH
Confidence 446777 7889999997665444
No 440
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=37.64 E-value=25 Score=20.26 Aligned_cols=27 Identities=7% Similarity=0.049 Sum_probs=20.6
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|....+.+.+..++..+|++++.+
T Consensus 38 ~e~g~~~~~~~~l~~i~~~l~~~~~~l 64 (68)
T 2r1j_L 38 WERSETEPNGENLLALSKALQCSPDYL 64 (68)
T ss_dssp HHTTSSCCBHHHHHHHHHHTTSCHHHH
T ss_pred HHcCCCCCCHHHHHHHHHHhCCCHHHH
Confidence 455655557889999999999987754
No 441
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=37.27 E-value=64 Score=24.61 Aligned_cols=67 Identities=7% Similarity=-0.018 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCe---------ecEE-EEC--Ceeee-------c
Q 027910 141 YIGDKEFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISG---------VPHF-VLN--GKHEL-------S 200 (217)
Q Consensus 141 ~i~~~~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g---------~Pt~-vv~--g~~~~-------~ 200 (217)
+.++.+...+.+++.|++ .| .+.|+. +.+.+..+|+.. +|+. +|+ |+... .
T Consensus 89 S~Ds~~~~~~f~~~~gl~--~fplLsD~~-------~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~ 159 (224)
T 3keb_A 89 TVDSPSSLARARHEHGLP--NIALLSTLR-------GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTR 159 (224)
T ss_dssp ESSCHHHHHHHHHHHCCT--TCEEEESTT-------CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTT
T ss_pred ECCCHHHHHHHHHHcCCC--CceEEEcCC-------chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCC
Confidence 345677888888888884 24 444431 012334455543 6765 554 65221 1
Q ss_pred CCCCHHHHHHHHHHHh
Q 027910 201 GGQPPEVYLRAFQVAA 216 (217)
Q Consensus 201 G~~~~~~l~~~i~~~~ 216 (217)
+..+++.++++|+++.
T Consensus 160 ~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 160 DFFDFDAIEKLLQEGE 175 (224)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh
Confidence 3356888888887653
No 442
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=36.62 E-value=41 Score=30.41 Aligned_cols=37 Identities=5% Similarity=-0.263 Sum_probs=28.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.++.|..|+.+-||.|....+.+.++.++|.+ ++.+.
T Consensus 675 ~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~~~~ 711 (780)
T 3apo_A 675 KTHWVVDFYAPWSGPSQNFAPEFELLARMIKG--KVRAG 711 (780)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CceEE
Confidence 34567777789999999999999999888864 45444
No 443
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=35.52 E-value=39 Score=25.52 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=17.1
Q ss_pred ceEEEEEecccCchhhhhHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l 34 (217)
+.++..|+...||+|....-.|
T Consensus 24 ~~~~~Ly~~~~sp~~~~v~~~L 45 (246)
T 3rbt_A 24 TDKLRLYHVDMNPYGHRVLLVL 45 (246)
T ss_dssp CSSEEEEECTTCHHHHHHHHHH
T ss_pred CCceEEEecCCCccHHHHHHHH
Confidence 5578889999999998755444
No 444
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=35.37 E-value=7.6 Score=23.75 Aligned_cols=12 Identities=25% Similarity=0.349 Sum_probs=10.6
Q ss_pred EEecccCchhhh
Q 027910 18 VSSDTVCPWCFV 29 (217)
Q Consensus 18 ~y~D~~CP~cy~ 29 (217)
+|.|+.||-|+.
T Consensus 4 ~Fm~VKCp~C~n 15 (66)
T 1qxf_A 4 RFVKVKCPDCEH 15 (66)
T ss_dssp CEEEEECTTTCC
T ss_pred eeEEEECCCCCC
Confidence 489999999995
No 445
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=35.27 E-value=5.3 Score=21.06 Aligned_cols=20 Identities=20% Similarity=0.483 Sum_probs=12.6
Q ss_pred ccCchhhhhHHHHHHHHHhc
Q 027910 22 TVCPWCFVGKRNLDKAIASS 41 (217)
Q Consensus 22 ~~CP~cy~~~~~l~~~~~~~ 41 (217)
|+||-|......-.+|...|
T Consensus 6 FiCP~C~~~l~s~~~L~~Hy 25 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHY 25 (34)
T ss_dssp EECTTTCCEESSHHHHHHHH
T ss_pred cCCcHHHHHcCCHHHHHHHH
Confidence 78999966554444454444
No 446
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=35.01 E-value=18 Score=25.96 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhcC-CCCCCHHHHHHHHHHcCCCcccc
Q 027910 126 NLAEELFLGYFTQG-KYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 126 ~~~~al~~a~~~~g-~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
.++..++...+.+| .+....+.|.+++..+|++...+
T Consensus 96 ~~l~~l~~vA~ADG~~~~~E~~~L~~iA~~Lgls~~~~ 133 (161)
T 2ou3_A 96 DILLSAIWVSAADGELHEKEKAKIRKMATILGIKEEIV 133 (161)
T ss_dssp HHHHHHHHHHHTTSSCCHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 38888888889998 45556789999999999998877
No 447
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=34.99 E-value=47 Score=25.02 Aligned_cols=45 Identities=16% Similarity=0.050 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEECC
Q 027910 142 IGDKEFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNG 195 (217)
Q Consensus 142 i~~~~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g 195 (217)
-.+++.+..+++++|+++++. .++|. ..|.+.|.+.|+ +++.|++
T Consensus 170 KP~p~~~~~a~~~lg~~p~e~l~VGDs------~~Di~aA~~aG~---~~i~v~~ 215 (250)
T 4gib_A 170 KPHPEIFLMSAKGLNVNPQNCIGIEDA------SAGIDAINSANM---FSVGVGN 215 (250)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESS------HHHHHHHHHTTC---EEEEESC
T ss_pred CCcHHHHHHHHHHhCCChHHeEEECCC------HHHHHHHHHcCC---EEEEECC
Confidence 347889999999999999887 66653 247788888887 4566643
No 448
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=34.92 E-value=28 Score=20.64 Aligned_cols=27 Identities=7% Similarity=0.049 Sum_probs=22.0
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 38 ~e~g~~~~~~~~l~~ia~~l~~~~~~l 64 (76)
T 1adr_A 38 WERSETEPNGENLLALSKALQCSPDYL 64 (76)
T ss_dssp HHTTSSCCCHHHHHHHHHHTTSCHHHH
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 456665557899999999999998877
No 449
>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*
Probab=34.82 E-value=28 Score=25.95 Aligned_cols=21 Identities=0% Similarity=-0.240 Sum_probs=16.3
Q ss_pred eEEEEEecccCchhhhhHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l 34 (217)
.++..|+.+.||+|....-.|
T Consensus 8 ~~~~Ly~~~~s~~~~~v~~~L 28 (235)
T 3n5o_A 8 PNFELYGYFRSSCSGRLRIAF 28 (235)
T ss_dssp CEEEEEECTTCHHHHHHHHHH
T ss_pred CCeEEEecCCCcHHHHHHHHH
Confidence 467888889999999755544
No 450
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=34.53 E-value=33 Score=25.07 Aligned_cols=67 Identities=9% Similarity=0.021 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHc----CCCcccc-cccCcccchhHHHHHHHHHhCCCC------eecEEEE-C--Cee--eecCC---
Q 027910 142 IGDKEFLVECARKV----GVEGAAE-FLDDPNSGLNEVHEELKKYSANIS------GVPHFVL-N--GKH--ELSGG--- 202 (217)
Q Consensus 142 i~~~~~L~~ia~~~----Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~------g~Pt~vv-~--g~~--~~~G~--- 202 (217)
+++.+.+.+.+++. |+..-.+ .+.++. .+.+...|+. ++|+++| + |+. ...|.
T Consensus 78 ~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~--------~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~ 149 (202)
T 1uul_A 78 MDSEYSHLAWTSIERKRGGLGQMNIPILADKT--------KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPV 149 (202)
T ss_dssp SSCHHHHHHHHHSCGGGTCCCSCSSCEEECTT--------CHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTB
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCceeEEECCc--------hHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCC
Confidence 34566666666654 3322233 333321 1234456676 9997655 3 552 22343
Q ss_pred -CCHHHHHHHHHHHh
Q 027910 203 -QPPEVYLRAFQVAA 216 (217)
Q Consensus 203 -~~~~~l~~~i~~~~ 216 (217)
...+++++.|+++.
T Consensus 150 ~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 150 GRDVDEALRLVKAFQ 164 (202)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhh
Confidence 35688888888653
No 451
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=34.28 E-value=35 Score=24.06 Aligned_cols=22 Identities=9% Similarity=-0.117 Sum_probs=16.4
Q ss_pred CcceEEEEEecccCchhhhhHH
Q 027910 11 KKLIRIDVSSDTVCPWCFVGKR 32 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~~~~ 32 (217)
..++.|..|+-.-||+|....+
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~ 67 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMEL 67 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHH
Confidence 3466777777789999998743
No 452
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=33.43 E-value=37 Score=26.34 Aligned_cols=27 Identities=7% Similarity=0.067 Sum_probs=18.9
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcC
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSK 42 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~ 42 (217)
++-|.||. .+|||- ..|.+.++.+.|.
T Consensus 35 ~vlV~Fy~--~ApWCg-l~P~~e~lA~~~~ 61 (248)
T 2c0g_A 35 YSVVKFDI--ASPYGE-KHEAFTAFSKSAH 61 (248)
T ss_dssp EEEEEEEE--SSCCSH-HHHHHHHHHHHHH
T ss_pred CEEEEEEC--CCCCCc-cHHHHHHHHHHHh
Confidence 44444443 488887 8888988888774
No 453
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.42 E-value=7.8 Score=23.51 Aligned_cols=12 Identities=17% Similarity=-0.028 Sum_probs=10.7
Q ss_pred EEecccCchhhh
Q 027910 18 VSSDTVCPWCFV 29 (217)
Q Consensus 18 ~y~D~~CP~cy~ 29 (217)
+|.|..||-|+.
T Consensus 12 ~Fm~VkCp~C~~ 23 (63)
T 3j20_W 12 RFLRVKCIDCGN 23 (63)
T ss_dssp CEEEEECSSSCC
T ss_pred cEEEEECCCCCC
Confidence 689999999995
No 454
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=33.35 E-value=64 Score=21.63 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=18.9
Q ss_pred ecEEEECCeeeecCCCCHHHHHHHHHH
Q 027910 188 VPHFVLNGKHELSGGQPPEVYLRAFQV 214 (217)
Q Consensus 188 ~Pt~vv~g~~~~~G~~~~~~l~~~i~~ 214 (217)
-|.++|||+++-.|......+-+.|++
T Consensus 80 YPlV~indeiVaEGnp~LK~I~~~ie~ 106 (111)
T 1xg8_A 80 YPLITMNDEYVADGYIQTKQITRFIDQ 106 (111)
T ss_dssp SSEEEETTEEEEESSCCHHHHHHHHHH
T ss_pred ceEEEECCEEeecCCccHHHHHHHHHH
Confidence 578888888666777777666666654
No 455
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=33.26 E-value=35 Score=23.98 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=23.8
Q ss_pred cceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
+++-|.+|.-.-||.|-...+.|.++.++ .++.+..
T Consensus 47 k~vvl~f~~~~~c~~C~~~~~~l~~~~~~----~~~~vv~ 82 (166)
T 3p7x_A 47 KKKLISVVPSIDTGVCDQQTRKFNSDASK----EEGIVLT 82 (166)
T ss_dssp SCEEEEECSCTTSHHHHHHHHHHHHHSCT----TTSEEEE
T ss_pred CcEEEEEECCCCCCccHHHHHHHHHHhhc----CCCEEEE
Confidence 34555555577899999888888776543 3566553
No 456
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=32.99 E-value=42 Score=21.36 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=22.5
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..++..+|++++.+
T Consensus 38 ~E~g~~~p~~~~l~~la~~l~v~~~~l 64 (98)
T 3lfp_A 38 YEKGKHAPDFEMANRLAKVLKIPVSYL 64 (98)
T ss_dssp HHHTSSCCCHHHHHHHHHHHTSCGGGG
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 556665568999999999999999877
No 457
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=32.96 E-value=70 Score=23.10 Aligned_cols=37 Identities=11% Similarity=0.030 Sum_probs=22.9
Q ss_pred HHHhCCCC------eecEEEE---CCee--eecCC----CCHHHHHHHHHHH
Q 027910 179 KKYSANIS------GVPHFVL---NGKH--ELSGG----QPPEVYLRAFQVA 215 (217)
Q Consensus 179 ~a~~~gv~------g~Pt~vv---~g~~--~~~G~----~~~~~l~~~i~~~ 215 (217)
.+...|+. ++|+++| +|+. ...|. ...+++++.|+++
T Consensus 110 ~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 110 LSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 34567777 8996554 3542 22343 3578888888765
No 458
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=32.15 E-value=82 Score=19.21 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=24.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCCcccc-------cccCcccchhH
Q 027910 138 QGKYIGDKEFLVECARKVGVEGAAE-------FLDDPNSGLNE 173 (217)
Q Consensus 138 ~g~~i~~~~~L~~ia~~~Gld~~~~-------~l~~~~~~~~~ 173 (217)
.|..+ +.+.|..+.+.+|++.+.+ .++..++.+.+
T Consensus 19 ~g~~~-ta~~I~~il~AaGveve~~~~~lf~~aL~gk~I~elI 60 (69)
T 2lbf_A 19 DEVTV-TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60 (69)
T ss_dssp HTCCC-CHHHHHHHHHHHTCCCCTHHHHHHHHHTTTSCGGGGG
T ss_pred CCCCC-CHHHHHHHHHHcCCCccHHHHHHHHHHHCCCCHHHHH
Confidence 35566 5789999999999988765 45555555443
No 459
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=31.92 E-value=38 Score=26.21 Aligned_cols=39 Identities=5% Similarity=-0.125 Sum_probs=27.9
Q ss_pred cceEEEEEe-cccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 12 KLIRIDVSS-DTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 12 ~~v~i~~y~-D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+..|.+|+ ---||.|-...+.|.++.++|.+ .++.|..
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~-~gv~vv~ 130 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVA 130 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT-TTEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEE
Confidence 344455554 66799999999999999888864 3566543
No 460
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=31.84 E-value=39 Score=20.12 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=21.7
Q ss_pred hhcCCC-CCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKY-IGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~-i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|.. .-+.+.+..++..+|++++.+
T Consensus 40 ~e~g~~~~~~~~~l~~ia~~l~~~~~~l 67 (78)
T 3b7h_A 40 MFEGRSKRPTITTIRKVCGTLGISVHDF 67 (78)
T ss_dssp HHCTTCCCCCHHHHHHHHHHHTCCHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 445655 557899999999999998876
No 461
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=31.77 E-value=32 Score=20.98 Aligned_cols=27 Identities=15% Similarity=0.073 Sum_probs=22.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.+..++..+|++++.+
T Consensus 47 ~e~g~~~~~~~~l~~l~~~l~~~~~~l 73 (83)
T 3f6w_A 47 TENAERRLDVIEFMDFCRGIGTDPYAL 73 (83)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTCCHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 556765557899999999999998876
No 462
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=31.70 E-value=83 Score=23.43 Aligned_cols=38 Identities=11% Similarity=-0.029 Sum_probs=29.1
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEEe
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRWH 52 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~ 52 (217)
+..+.+|.++.|+.|....+.++++.++|++ .+.+.|.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~--~i~F~~v 169 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQG--KILFILV 169 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTT--TCEEEEE
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhC--CEEEEEe
Confidence 5666777899999998888889988888875 4666553
No 463
>3mlf_A Transcriptional regulator; structural genomics, helix-turn-helix XRE-family like protei transcription regulator, PSI-2; 2.60A {Staphylococcus aureus subsp}
Probab=31.46 E-value=59 Score=21.45 Aligned_cols=27 Identities=7% Similarity=-0.029 Sum_probs=22.3
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..++..+|++.+.+
T Consensus 56 ~E~G~~~ps~~~l~~ia~~l~v~~~~l 82 (111)
T 3mlf_A 56 MEKDSTNIKDSLLSKYMSAFNVKYDDI 82 (111)
T ss_dssp HHHCCTTCCHHHHHHHHHHHTCCGGGE
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHHHH
Confidence 456665557899999999999999876
No 464
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=31.05 E-value=36 Score=21.49 Aligned_cols=27 Identities=11% Similarity=0.048 Sum_probs=22.6
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.|..++..+|++.+.+
T Consensus 42 ~e~G~~~p~~~~l~~ia~~l~v~~~~l 68 (94)
T 2kpj_A 42 WCKGIAIPRMGKVQALADYFNINKSDL 68 (94)
T ss_dssp HHTTSCCCCHHHHHHHHHHHTCCTHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 556766668899999999999998877
No 465
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=30.98 E-value=17 Score=30.07 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=16.8
Q ss_pred ceEEEEEecccCchhhhhHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKR 32 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~ 32 (217)
..+|.+|+-+.||||..+..
T Consensus 260 ~~~VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 260 ENEIFVASKTYCPYSHAALN 279 (362)
T ss_dssp TCSEEEEECTTCHHHHHHHH
T ss_pred cCCEEEEEcCCCcchHHHHH
Confidence 45688899999999998765
No 466
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=30.78 E-value=48 Score=28.95 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCcccccccCcccchhHHHHHHHHHhCCCCeecEEEECCeeeecCC
Q 027910 146 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGG 202 (217)
Q Consensus 146 ~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g~~~~~G~ 202 (217)
..+++++.+.|++...+.++..+-...+++..+ ...|...+|.+++||+ .+.|.
T Consensus 32 ~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~--~~~g~~tvP~v~i~g~-~igG~ 85 (598)
T 2x8g_A 32 KKVKDVLAEAKIKHATIELDQLSNGSAIQKCLA--SFSKIETVPQMFVRGK-FIGDS 85 (598)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTH--HHHSCCCSCEEEETTE-EEECH
T ss_pred HHHHHHHHHCCCCcEEEEcccCcchHHHHHHHH--HHhCCceeCEEEECCE-EEEee
Confidence 456677777888765543332111122333222 2258889999999998 45665
No 467
>1rpq_W Peptide E131; receptor-peptide complex, membrane protein; HET: NAG BMA NDG CIT; 3.00A {Homo sapiens} PDB: 1kco_A
Probab=30.70 E-value=16 Score=17.23 Aligned_cols=6 Identities=50% Similarity=2.095 Sum_probs=2.7
Q ss_pred cCc-hhh
Q 027910 23 VCP-WCF 28 (217)
Q Consensus 23 ~CP-~cy 28 (217)
.|| |||
T Consensus 2 qcphfcy 8 (26)
T 1rpq_W 2 QCPHFCY 8 (26)
T ss_dssp CCCTHHH
T ss_pred CCCeeee
Confidence 355 354
No 468
>2ofy_A Putative XRE-family transcriptional regulator; transcription regulator, structural genomics, PS protein structure initiative; 1.70A {Rhodococcus SP} SCOP: a.35.1.3
Probab=30.47 E-value=33 Score=21.09 Aligned_cols=27 Identities=11% Similarity=0.038 Sum_probs=21.7
Q ss_pred hhcCCC-CCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKY-IGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~-i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|.. .-+.+.|..++..+|++.+.+
T Consensus 47 ~E~g~~~~p~~~~l~~ia~~l~v~~~~l 74 (86)
T 2ofy_A 47 IETGRIATPAFFTIAAVARVLDLSLDDV 74 (86)
T ss_dssp HHTTCCSSCBHHHHHHHHHHTTCCHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHhCCCHHHH
Confidence 456665 457899999999999998876
No 469
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=30.41 E-value=65 Score=24.21 Aligned_cols=38 Identities=8% Similarity=-0.033 Sum_probs=29.0
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEEE
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIRW 51 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~~ 51 (217)
.+.|.+|.---||.|-...+.|.++.++|.+ .+++|.-
T Consensus 33 ~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~-~~v~vi~ 70 (224)
T 1prx_A 33 WGILFSHPRDFTPVCTTELGRAAKLAPEFAK-RNVKLIA 70 (224)
T ss_dssp EEEEEEESCSSCHHHHHHHHHHHHHHHHHHT-TTEEEEE
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 4666666777899999999999999888864 4566643
No 470
>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}
Probab=30.21 E-value=64 Score=24.08 Aligned_cols=20 Identities=20% Similarity=-0.082 Sum_probs=13.2
Q ss_pred eEEEEEecccCchhhhhHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l 34 (217)
..+..|+.+ ||+|....-.|
T Consensus 21 ~~~~Ly~~~-~~~~~~v~~~L 40 (244)
T 4ikh_A 21 EWIQLYSLP-TPNGVKVSIML 40 (244)
T ss_dssp TSEEEEECS-SHHHHHHHHHH
T ss_pred CeeEEEeCC-CCChHHHHHHH
Confidence 355666667 99998755444
No 471
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=30.07 E-value=21 Score=25.89 Aligned_cols=39 Identities=10% Similarity=-0.024 Sum_probs=28.7
Q ss_pred CcceEEEEEecccCchhhh-hHHHHHHHHHhcCCCCceeEE
Q 027910 11 KKLIRIDVSSDTVCPWCFV-GKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 11 ~~~v~i~~y~D~~CP~cy~-~~~~l~~~~~~~~~~~~v~v~ 50 (217)
.+++.|.+|.---||.|-. -.+.+.++.++|.. .++.+.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~-~gv~vv 82 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA-KGVQVV 82 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT-TTCCEE
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh-CCCEEE
Confidence 3456677777888999995 66888888888763 456665
No 472
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=29.72 E-value=36 Score=20.69 Aligned_cols=27 Identities=7% Similarity=-0.117 Sum_probs=22.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..++..+|++++.+
T Consensus 44 ~e~g~~~~~~~~l~~ia~~l~v~~~~l 70 (82)
T 3s8q_A 44 IERNSRNLTIKSLELIMKGLEVSDVVF 70 (82)
T ss_dssp HHTTCCCCBHHHHHHHHHHTTCCHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 556765557899999999999998876
No 473
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=29.51 E-value=59 Score=20.11 Aligned_cols=27 Identities=11% Similarity=-0.132 Sum_probs=21.9
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 50 ~e~g~~~~~~~~l~~ia~~l~v~~~~l 76 (92)
T 1lmb_3 50 LFNGINALNAYNAALLAKILKVSVEEF 76 (92)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGGGT
T ss_pred HHcCCCCCCHHHHHHHHHHHCCCHHHH
Confidence 556765557889999999999998876
No 474
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=29.46 E-value=78 Score=18.55 Aligned_cols=24 Identities=33% Similarity=0.387 Sum_probs=19.3
Q ss_pred cCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 138 QGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 138 ~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
.|..+ +.+.|..+.+.+|++.+.+
T Consensus 13 ~g~~~-t~~~I~~il~aaGveve~~ 36 (58)
T 3a1y_A 13 VGKEI-NEENLKAVLQAAGVEPEEA 36 (58)
T ss_dssp TTCCC-CHHHHHHHHHHTTCCCCHH
T ss_pred CCCCC-CHHHHHHHHHHcCCCccHH
Confidence 45555 5789999999999988765
No 475
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=28.84 E-value=44 Score=19.79 Aligned_cols=27 Identities=4% Similarity=-0.055 Sum_probs=21.4
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|..|...-+.+.+..++..+|++++.+
T Consensus 43 ~e~g~~~~~~~~l~~la~~l~~~~~~l 69 (77)
T 2b5a_A 43 VERGDRNISLINIHKICAALDIPASTF 69 (77)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTCCHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHHHH
Confidence 455665557899999999999998776
No 476
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=28.76 E-value=36 Score=20.73 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=21.9
Q ss_pred hhcC-CCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQG-KYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g-~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.| ...-+.+.|..++..+|++.+.+
T Consensus 43 ~E~G~~~~p~~~~l~~ia~~l~v~~~~l 70 (78)
T 3qq6_A 43 IERNLQTNPSIQFLEKVSAVLDVSVHTL 70 (78)
T ss_dssp HHTTSCCCCBHHHHHHHHHHHTCCHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 5567 45557899999999999998876
No 477
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=27.94 E-value=57 Score=23.88 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=15.5
Q ss_pred EEEEecccCchhhhhHHHHH
Q 027910 16 IDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 16 i~~y~D~~CP~cy~~~~~l~ 35 (217)
+..|+.+.||+|....-.|.
T Consensus 7 ~~Ly~~~~sp~~~~v~~~L~ 26 (216)
T 3lyk_A 7 MTLFSNKDDIYCHQVKIVLA 26 (216)
T ss_dssp EEEEECTTCHHHHHHHHHHH
T ss_pred EEEEeCCCChhHHHHHHHHH
Confidence 77888899999998655443
No 478
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=27.80 E-value=30 Score=30.28 Aligned_cols=23 Identities=30% Similarity=0.495 Sum_probs=18.6
Q ss_pred eEEEEEecccCchhhhhHHHHHH
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
.+|.+|+-..||||..+...|.+
T Consensus 18 ~~v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 18 AAVILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChhHHHHHHHHHH
Confidence 46889999999999987766653
No 479
>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A
Probab=27.54 E-value=45 Score=25.42 Aligned_cols=19 Identities=16% Similarity=-0.038 Sum_probs=14.1
Q ss_pred eEEEEEecccCchhhhhHH
Q 027910 14 IRIDVSSDTVCPWCFVGKR 32 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~ 32 (217)
..+..|+...||+|....-
T Consensus 18 ~~~~Ly~~~~~p~~~~v~~ 36 (260)
T 1k0d_A 18 EGYTLFSHRSAPNGFKVAI 36 (260)
T ss_dssp SSEEEEECTTCHHHHHHHH
T ss_pred CcEEEEcCCCCccHHHHHH
Confidence 4567788899999976443
No 480
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=27.20 E-value=39 Score=24.75 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=15.4
Q ss_pred EEEEEecccCchhhhhHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l 34 (217)
++..|+.+.||+|....-.|
T Consensus 8 ~~~Ly~~~~s~~~~~v~~~L 27 (215)
T 3lyp_A 8 RLACYSDPADHYSHRVRIVL 27 (215)
T ss_dssp CCEEEECTTCHHHHHHHHHH
T ss_pred CeEEEeCCCCchHHHHHHHH
Confidence 56778889999999765444
No 481
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=27.19 E-value=13 Score=19.70 Aligned_cols=8 Identities=38% Similarity=1.061 Sum_probs=6.4
Q ss_pred ccCchhhh
Q 027910 22 TVCPWCFV 29 (217)
Q Consensus 22 ~~CP~cy~ 29 (217)
.+||||..
T Consensus 16 TlC~wCK~ 23 (39)
T 2hlg_A 16 TLCQFCKE 23 (39)
T ss_dssp SSCCEEEE
T ss_pred Eeccccee
Confidence 57999975
No 482
>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C family, structural genomics, PSI- protein structure initiative; 2.10A {Corynebacterium glutamicum}
Probab=27.16 E-value=35 Score=28.17 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=18.0
Q ss_pred ceEEEEEecccCchhhhhHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~ 35 (217)
+-++..|....||||+...-.+.
T Consensus 59 ~gr~~LY~~~~cP~a~Rv~I~L~ 81 (362)
T 3m1g_A 59 AGRYRLVAARACPWAHRTVITRR 81 (362)
T ss_dssp TTSEEEEECTTCHHHHHHHHHHH
T ss_pred CCeEEEEecCCCccHHHHHHHHH
Confidence 44678899999999998765443
No 483
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=26.56 E-value=52 Score=24.42 Aligned_cols=18 Identities=6% Similarity=0.015 Sum_probs=13.6
Q ss_pred EEEecccCchhhhhHHHH
Q 027910 17 DVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 17 ~~y~D~~CP~cy~~~~~l 34 (217)
..|+.+.||||....-.|
T Consensus 24 KLy~~~~SP~~~rVr~~L 41 (225)
T 4glt_A 24 KLLYSNTSPYARKVRVVA 41 (225)
T ss_dssp EEEECSSCHHHHHHHHHH
T ss_pred eEecCCCCHHHHHHHHHH
Confidence 468889999999755444
No 484
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=26.33 E-value=20 Score=28.69 Aligned_cols=27 Identities=22% Similarity=0.282 Sum_probs=21.6
Q ss_pred eEEEEEecccCchhhhhHHHHHHHHHh
Q 027910 14 IRIDVSSDTVCPWCFVGKRNLDKAIAS 40 (217)
Q Consensus 14 v~i~~y~D~~CP~cy~~~~~l~~~~~~ 40 (217)
..+..|+-+-||+|....+.++++-++
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~ 225 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQ 225 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 346788889999999999988876543
No 485
>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}
Probab=26.21 E-value=1.4e+02 Score=22.85 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=15.1
Q ss_pred cCchhhhhHHHHHHHHHhcCCCCceeEEEeecc
Q 027910 23 VCPWCFVGKRNLDKAIASSKDQYDFEIRWHPFF 55 (217)
Q Consensus 23 ~CP~cy~~~~~l~~~~~~~~~~~~v~v~~~p~~ 55 (217)
.||||....-.|. +++++ .++.++.+.+.
T Consensus 39 ~cP~~~rv~~~L~-ll~~~---~gi~ye~~~v~ 67 (260)
T 2yv7_A 39 ACLFCQEYFMDLY-LLAEL---KTISLKVTTVD 67 (260)
T ss_dssp CCHHHHHHHHHHH-HHHHT---TSSEEEEEEEC
T ss_pred cChHHHHHHHHHH-hHHHh---cCCCceEEEec
Confidence 5899987654442 22222 24555555443
No 486
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=26.12 E-value=1.1e+02 Score=22.12 Aligned_cols=47 Identities=15% Similarity=0.230 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCeecEEEECC
Q 027910 140 KYIGDKEFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISGVPHFVLNG 195 (217)
Q Consensus 140 ~~i~~~~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g~Pt~vv~g 195 (217)
..-.+++.+..+++.+|+++++. .++|. . .|...|++.|+ +++.+++
T Consensus 171 ~~KP~~~~~~~~~~~~g~~~~~~~~vGD~-----~-~Di~~a~~aG~---~~i~v~~ 218 (229)
T 4dcc_A 171 MAKPEPEIFKAVTEDAGIDPKETFFIDDS-----E-INCKVAQELGI---STYTPKA 218 (229)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEECSC-----H-HHHHHHHHTTC---EEECCCT
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEECCC-----H-HHHHHHHHcCC---EEEEECC
Confidence 33457899999999999999887 66664 2 57778888876 4555553
No 487
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=25.90 E-value=57 Score=20.26 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=21.9
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..++..+|++.+.+
T Consensus 46 ~e~g~~~p~~~~l~~la~~l~v~~~~l 72 (91)
T 1x57_A 46 YESGRAIPNNQVLGKIERAIGLKLRGK 72 (91)
T ss_dssp HHHTCSCCCHHHHHHHHHHHTBCCSST
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 455665567899999999999999876
No 488
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=25.89 E-value=98 Score=24.39 Aligned_cols=60 Identities=13% Similarity=0.107 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCCcccc-------cccCccc-chhHHHHHHHH-HhCCC
Q 027910 124 QHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGAAE-------FLDDPNS-GLNEVHEELKK-YSANI 185 (217)
Q Consensus 124 ~~~~~~al~~a~~~~g~~i~~~~~L~~ia~~~Gld~~~~-------~l~~~~~-~~~~~~~~~~a-~~~gv 185 (217)
...-+.++|..|- +.+.-..+-+..+++++|++++.+ .++.+.. ..--+++.-.+ .++|+
T Consensus 72 ~~~~l~~lF~~Y~--~~d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~ 140 (270)
T 3bq3_A 72 YPKELTQVFEHYI--NNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGC 140 (270)
T ss_dssp SCHHHHHHHHHHC--BTTBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHhc--CCCccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCC
Confidence 4456788888875 334336899999999999999876 3445544 33334443333 34444
No 489
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=25.88 E-value=10 Score=26.79 Aligned_cols=37 Identities=5% Similarity=0.090 Sum_probs=18.7
Q ss_pred ceEEEEEecccCchhhhhHHHHHHHHHhcCCCCceeEE
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDKAIASSKDQYDFEIR 50 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~~~~~~~~~~~v~v~ 50 (217)
++-|.+|.-.-||.|-...+.+.++.++|.. .++.+.
T Consensus 32 ~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~-~~~~~v 68 (157)
T 4g2e_A 32 VVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ-VNAVVL 68 (157)
T ss_dssp CEEEEECSCTTCCC------CCSCGGGGGGG-CSSEEE
T ss_pred eEEEEecCCCCCCccccchhhcccccccccc-cCceEe
Confidence 4444444467799998877777776666652 345443
No 490
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=25.87 E-value=52 Score=24.09 Aligned_cols=20 Identities=10% Similarity=-0.185 Sum_probs=14.7
Q ss_pred EEEEEecccCchhhhhHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNL 34 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l 34 (217)
.+..|+.+.||+|....-.|
T Consensus 2 ~~~Ly~~~~sp~~~~v~~~L 21 (218)
T 1r5a_A 2 TTVLYYLPASPPCRSVLLLA 21 (218)
T ss_dssp CEEEEECTTCHHHHHHHHHH
T ss_pred eEEEEeCCCChhHHHHHHHH
Confidence 46788889999998644333
No 491
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=25.31 E-value=39 Score=20.31 Aligned_cols=27 Identities=19% Similarity=0.038 Sum_probs=21.4
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.+..++..+|++.+.+
T Consensus 35 ~e~g~~~p~~~~l~~ia~~l~v~~~~l 61 (77)
T 2k9q_A 35 IEQSETAPVVVKYIAFLRSKGVDLNAL 61 (77)
T ss_dssp HHTCCSCCHHHHHHHHHHHTTCCHHHH
T ss_pred HHcCCCCCCHHHHHHHHHHhCcCHHHH
Confidence 456665456889999999999998876
No 492
>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*
Probab=25.13 E-value=70 Score=23.15 Aligned_cols=21 Identities=10% Similarity=0.088 Sum_probs=15.9
Q ss_pred EEEEEecccCchhhhhHHHHH
Q 027910 15 RIDVSSDTVCPWCFVGKRNLD 35 (217)
Q Consensus 15 ~i~~y~D~~CP~cy~~~~~l~ 35 (217)
.+..|+.+.||+|....-.|.
T Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~ 22 (214)
T 4id0_A 2 SLTLFHNPASPYVRKVMVLLH 22 (214)
T ss_dssp CEEEEECSSCHHHHHHHHHHH
T ss_pred ceEEecCCCCChHHHHHHHHH
Confidence 377888999999997555443
No 493
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=25.08 E-value=46 Score=21.48 Aligned_cols=27 Identities=7% Similarity=-0.117 Sum_probs=22.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..++..+|++++.+
T Consensus 61 iE~G~~~ps~~~l~~ia~~l~v~~~~l 87 (99)
T 3g5g_A 61 IERNSRNLTIKSLELIMKGLEVSDVVF 87 (99)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTCCHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 456765557899999999999998876
No 494
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=24.74 E-value=14 Score=23.56 Aligned_cols=13 Identities=31% Similarity=0.613 Sum_probs=11.3
Q ss_pred EEEecccCchhhh
Q 027910 17 DVSSDTVCPWCFV 29 (217)
Q Consensus 17 ~~y~D~~CP~cy~ 29 (217)
-+|.|+.||-||.
T Consensus 30 S~Fm~VkCp~C~~ 42 (82)
T 3u5c_b 30 SYFLDVKCPGCLN 42 (82)
T ss_dssp CCEEEEECTTSCS
T ss_pred CcEEEEECCCCCC
Confidence 4799999999995
No 495
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=24.34 E-value=14 Score=23.55 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=11.2
Q ss_pred EEEecccCchhhh
Q 027910 17 DVSSDTVCPWCFV 29 (217)
Q Consensus 17 ~~y~D~~CP~cy~ 29 (217)
-+|.|+.||-|+.
T Consensus 28 S~Fm~VkCp~C~n 40 (81)
T 2xzm_6 28 SYFMDVKCAQCQN 40 (81)
T ss_dssp CCEEEEECSSSCC
T ss_pred CcEEEeECCCCCC
Confidence 4689999999995
No 496
>3qwg_A ESX-1 secretion-associated regulator ESPR; N-terminal helix-turn-helix motif, transcription factor, transcription; 1.99A {Mycobacterium tuberculosis} PDB: 3qf3_A 3qyx_A
Probab=24.03 E-value=76 Score=21.56 Aligned_cols=43 Identities=14% Similarity=-0.067 Sum_probs=27.6
Q ss_pred hhcCCC-CCCHHHHHHHHHHcCCCcccccccCcccchhHHHHHHHH
Q 027910 136 FTQGKY-IGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK 180 (217)
Q Consensus 136 ~~~g~~-i~~~~~L~~ia~~~Gld~~~~~l~~~~~~~~~~~~~~~a 180 (217)
++.|+. --+.+.|..||..+|++++-| +++ +....+..+.+..
T Consensus 49 iE~G~r~~Ps~~~l~~iA~~f~V~~~yl-~~~-~~~~~~~~~l~ll 92 (123)
T 3qwg_A 49 LRSGNRTNPSGATMAALANFFRIKAAYF-TDD-EYYEKLDKELQWL 92 (123)
T ss_dssp HHHTSSCCCCHHHHHHHHHHTTSCTHHH-HCH-HHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHhCCCHHHH-cCC-ccHhHHHHHHHHH
Confidence 445653 457899999999999999876 222 2233455554443
No 497
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=23.97 E-value=95 Score=22.26 Aligned_cols=41 Identities=17% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHHHcCCCcccc-cccCcccchhHHHHHHHHHhCCCCe
Q 027910 141 YIGDKEFLVECARKVGVEGAAE-FLDDPNSGLNEVHEELKKYSANISG 187 (217)
Q Consensus 141 ~i~~~~~L~~ia~~~Gld~~~~-~l~~~~~~~~~~~~~~~a~~~gv~g 187 (217)
.-.+++.+..+++.+|+++++. .++|. . .|.+.|++.|+..
T Consensus 139 ~KP~p~~~~~a~~~lg~~p~e~l~VgDs-----~-~Di~aA~~aG~~~ 180 (216)
T 3kbb_A 139 GKPDPEIYLLVLERLNVVPEKVVVFEDS-----K-SGVEAAKSAGIER 180 (216)
T ss_dssp CTTSTHHHHHHHHHHTCCGGGEEEEECS-----H-HHHHHHHHTTCCC
T ss_pred CcccHHHHHHHHHhhCCCccceEEEecC-----H-HHHHHHHHcCCcE
Confidence 3447889999999999999887 66653 2 4788888888754
No 498
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=23.72 E-value=54 Score=23.14 Aligned_cols=24 Identities=8% Similarity=0.056 Sum_probs=18.0
Q ss_pred ceEEEEEecccCchhhhhHHHHHH
Q 027910 13 LIRIDVSSDTVCPWCFVGKRNLDK 36 (217)
Q Consensus 13 ~v~i~~y~D~~CP~cy~~~~~l~~ 36 (217)
+..+..|+-.-||+|....+.+.+
T Consensus 45 KpVlV~F~A~WC~~Ck~m~p~~~~ 68 (151)
T 3ph9_A 45 KPLMVIHHLEDCQYSQALKKVFAQ 68 (151)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCHhHHHHHHHHhc
Confidence 444555566889999999988764
No 499
>3ivp_A Putative transposon-related DNA-binding protein; APC62618, clostridium diffic structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile}
Probab=23.49 E-value=1.1e+02 Score=20.27 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=22.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCCcccc
Q 027910 136 FTQGKYIGDKEFLVECARKVGVEGAAE 162 (217)
Q Consensus 136 ~~~g~~i~~~~~L~~ia~~~Gld~~~~ 162 (217)
|+.|...-+.+.|..+|..+|++++.+
T Consensus 45 ~E~g~~~p~~~~l~~ia~~l~v~~~~l 71 (126)
T 3ivp_A 45 IENKGQHPSLQVLYDLVSLLNVSVDEF 71 (126)
T ss_dssp HHHSCCCCCHHHHHHHHHHHTCCSHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHHHH
Confidence 455665557899999999999999887
No 500
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.39 E-value=1.7e+02 Score=19.61 Aligned_cols=41 Identities=20% Similarity=0.197 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHc---CCCcccccccCcccchhHHHHHHHHHhCCC
Q 027910 143 GDKEFLVECARKV---GVEGAAEFLDDPNSGLNEVHEELKKYSANI 185 (217)
Q Consensus 143 ~~~~~L~~ia~~~---Gld~~~~~l~~~~~~~~~~~~~~~a~~~gv 185 (217)
+|++.|.+|..+. |+..- .+-|+.-.++-++...+....|+
T Consensus 10 sdpeilkeivreikrqgvrvv--llysdqdekrrrerleefekqgv 53 (162)
T 2l82_A 10 SDPEILKEIVREIKRQGVRVV--LLYSDQDEKRRRERLEEFEKQGV 53 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEE--EEECCSCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHhCCeEEE--EEecCchHHHHHHHHHHHHHcCC
Confidence 4677777776543 44221 22222223344444555555544
Done!