BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027911
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1
Length = 298
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/199 (87%), Positives = 192/199 (96%)
Query: 16 QGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYL 75
QG GPPPM+ RFQ+++SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDP KDI+MY+
Sbjct: 100 QGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYV 159
Query: 76 NSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 135
NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ
Sbjct: 160 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 219
Query: 136 PLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYG 195
PLGGAQGGQ+DID+QANEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRDFFMSA+EAK+YG
Sbjct: 220 PLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYG 279
Query: 196 LIDGVVMNPHKILQPVAAA 214
LIDGV+MNP K LQP+AAA
Sbjct: 280 LIDGVIMNPLKALQPLAAA 298
>sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3
SV=1
Length = 204
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 151/186 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 15 RAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGM 74
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
IFDT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 75 GIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATD 134
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS +EA+DYGLID V+
Sbjct: 135 IEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAA 194
Query: 207 ILQPVA 212
+PVA
Sbjct: 195 GSRPVA 200
>sp|Q8YXH5|CLPP1_NOSS1 ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP1 PE=3 SV=1
Length = 204
Score = 253 bits (645), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/186 (65%), Positives = 150/186 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RI+ G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 15 RAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGM 74
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
IFDT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 75 GIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATD 134
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS +EAKDYGLID V+
Sbjct: 135 IEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHAA 194
Query: 207 ILQPVA 212
+PVA
Sbjct: 195 GSRPVA 200
>sp|Q8YQX8|CLPP2_NOSS1 ATP-dependent Clp protease proteolytic subunit 2 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP2 PE=3 SV=1
Length = 232
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 143/175 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L+ KA LN L+ HTGQ LE+I DTDRDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 216
>sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3
SV=2
Length = 214
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 143/175 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 24 RAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 83
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 84 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAID 143
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L+ KA LN L+ HTGQ LE+I DTDRDFFMSAEEAK+YGLID V+
Sbjct: 144 IEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 198
>sp|C0QGT0|CLPP_DESAH ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=clpP PE=3 SV=1
Length = 205
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 151/187 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G ++D++AN+IVAQLL+L++ DP KDI Y+NSPGG VTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGM 75
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
A++DT+++I+PDV+TVC+G AASMGA LL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 76 AVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 135
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I +QANE+L K L+G LS HTGQ +KI+EDTDRDFFMS ++AK+YGL+D VV + +
Sbjct: 136 IKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDE 195
Query: 207 ILQPVAA 213
+ + AA
Sbjct: 196 LEKAEAA 202
>sp|P54416|CLPP1_SYNY3 ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=clpP1 PE=3 SV=1
Length = 198
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 145/175 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RI+ G V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
IFDT+ IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L+ KA LN +L+ HTG++LE+I DT+RDFFMSAEE+K+YGLID V+
Sbjct: 134 IEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVI 188
>sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=clpP2 PE=3 SV=1
Length = 200
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 151/188 (80%), Gaps = 3/188 (1%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGM
Sbjct: 14 RAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGM 73
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++HI+PDVST+C+GLAASMGAFLL+ GTKGKR +LP++RIMIHQPLGGAQG +D
Sbjct: 74 AIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATD 133
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++QA E+L K +LN L+YHTGQ LE+I DTDRD FM+ E+AK+YGLID V+ K
Sbjct: 134 IEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI---SK 190
Query: 207 ILQPVAAA 214
QP AA
Sbjct: 191 RPQPTLAA 198
>sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic subunit 1
OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1
PE=3 SV=1
Length = 229
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 146/190 (76%), Gaps = 7/190 (3%)
Query: 27 RFQNVLSQLFQHRIIRCGGP------VEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGG 80
R ++ S+L + RII GG ++D +A+ IVAQLL+LDA DP KDI +Y+NSPGG
Sbjct: 41 RAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGG 100
Query: 81 SVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGA 140
SVTAGMAI+DT++HIRPDV T+C GLAASMGAFLLS GT GKR +LPN+RIMIHQPLGGA
Sbjct: 101 SVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGA 160
Query: 141 QGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 200
QG DI++QA E+L+HK LN LS HTGQ +E+I DT+RDFFMSAEEAK YGLID V
Sbjct: 161 QGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQV 220
Query: 201 VMNPHKILQP 210
V +L P
Sbjct: 221 VTR-QTLLSP 229
>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=clpP2 PE=3 SV=1
Length = 226
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 143/179 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 36 RAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGL 95
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 96 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVE 155
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 205
I++QA E+L+ K LN L HTGQ +EK+ EDT+RDFFMSAEEAK+YGLID V+ P+
Sbjct: 156 IEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPN 214
>sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas
wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3
SV=1
Length = 200
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 148/180 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G ++D +AN+++AQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGM 76
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+++IRPDVST+CVGLAASMGAFLL+AG KGKRY+LPN+ IMIHQP GG QG +D
Sbjct: 77 AIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATD 136
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++ A +++ K +LN L+ TGQ LE+I +DTDRD+FM+A+EAK+YG+ID V+ +P K
Sbjct: 137 IEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVISHPKK 196
>sp|Q2JV68|CLPP2_SYNJA ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1
Length = 200
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 145/175 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGM
Sbjct: 14 RAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGM 73
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++HI+PDVST+C+GLAASMGAFLL+ G KGKR +LP++RIMIHQPLGGAQG +D
Sbjct: 74 AIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATD 133
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L K +LN L+YHTGQ LE+I DTDRD FM+ E+AK+YGLID V+
Sbjct: 134 IEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>sp|Q5N665|CLPP1_SYNP6 ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=clpP1 PE=3 SV=1
Length = 197
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 139/175 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G PV D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+
Sbjct: 14 RAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGL 73
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
IFDT+ HIRPDVSTVCVGLAASMGAFLL+AG KGKR SL +SRIMIHQPLGGAQG D
Sbjct: 74 GIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKD 133
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QANE+L+ K NLN L+ TGQ L +I +DTDRDFFMSA EA +YGLID V+
Sbjct: 134 IEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188
>sp|P54415|CLPP1_SYNE7 ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1
Length = 197
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 139/175 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G PV D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+
Sbjct: 14 RAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGL 73
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
IFDT+ HIRPDVSTVCVGLAASMGAFLL+AG KGKR SL +SRIMIHQPLGGAQG D
Sbjct: 74 GIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKD 133
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QANE+L+ K NLN L+ TGQ L +I +DTDRDFFMSA EA +YGLID V+
Sbjct: 134 IEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188
>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=clpP3 PE=3 SV=1
Length = 240
Score = 236 bits (603), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 142/178 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RI+ G V+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 50 RAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGM 109
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG D
Sbjct: 110 AIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVD 169
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 204
I++QA E+L+HK+ LN L+ HTGQ LEKI DTDRDFFMS EEAK YGLID V+ P
Sbjct: 170 IEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227
>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1
Length = 240
Score = 236 bits (603), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 142/178 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RI+ G V+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 50 RAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGM 109
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG D
Sbjct: 110 AIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVD 169
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 204
I++QA E+L+HK+ LN L+ HTGQ LEKI DTDRDFFMS EEAK YGLID V+ P
Sbjct: 170 IEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227
>sp|O30612|CLPP2_MYXXD ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus
xanthus (strain DK 1622) GN=clpP2 PE=3 SV=1
Length = 203
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 150/189 (79%), Gaps = 1/189 (0%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGL 74
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
ID+QA E+L ++ +NG + HTG T+E+I +DT+RD+FMSAE+A+ YGLID VV +
Sbjct: 135 IDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVV-EKQR 193
Query: 207 ILQPVAAAA 215
++ P A A
Sbjct: 194 VIAPTPAPA 202
>sp|Q7M7M3|CLPP_WOLSU ATP-dependent Clp protease proteolytic subunit OS=Wolinella
succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 /
NCTC 11488 / FDC 602W) GN=clpP PE=3 SV=1
Length = 195
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 145/180 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G + D +A+ IV+Q+L+L+A DP KDI +Y+NSPGG +T+GM
Sbjct: 16 RSYDIYSRLLKDRIIMLSGEINDGVASSIVSQMLFLEAEDPEKDIYLYINSPGGVITSGM 75
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
+I+DT+ +++PD+ T+C+G AASMGAFLLS GTKGKR+SLPNSRIMIHQPLGGAQG +D
Sbjct: 76 SIYDTMNYVKPDICTICIGQAASMGAFLLSCGTKGKRFSLPNSRIMIHQPLGGAQGQATD 135
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++QA E+L K+ LNG L+ +TGQ LEKI +DTDRDFFMSA+E+K+YGLID V+ K
Sbjct: 136 IEIQAKEILRLKSILNGILASNTGQPLEKIAKDTDRDFFMSAQESKEYGLIDNVLEKSFK 195
>sp|B1L812|CLPP_THESQ ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp.
(strain RQ2) GN=clpP PE=3 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 26 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 82
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 21 GRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 80
Query: 83 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 142
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AG KGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 81 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG 140
Query: 143 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 141 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
GN=clpP PE=3 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 26 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 82
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 21 GRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 80
Query: 83 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 142
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AG KGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 81 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG 140
Query: 143 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 141 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|Q9WZF9|CLPP_THEMA ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=clpP PE=3 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 26 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 82
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 21 GRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 80
Query: 83 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 142
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AG KGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 81 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG 140
Query: 143 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 141 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>sp|Q88KJ0|CLPP_PSEPK ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain KT2440) GN=clpP PE=3 SV=1
Length = 213
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSA 193
Query: 189 EEAKDYGLIDGV 200
A +YGLID V
Sbjct: 194 SRAAEYGLIDSV 205
>sp|A5W635|CLPP_PSEP1 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=clpP PE=3 SV=1
Length = 213
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSA 193
Query: 189 EEAKDYGLIDGV 200
A +YGLID V
Sbjct: 194 SRAAEYGLIDSV 205
>sp|A2SFB5|CLPP_METPP ATP-dependent Clp protease proteolytic subunit OS=Methylibium
petroleiphilum (strain PM1) GN=clpP PE=3 SV=1
Length = 202
Score = 233 bits (594), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 144/175 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 24 RAYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGL 83
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
+IFDT++ I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNSR+MIHQP GGAQG +D
Sbjct: 84 SIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRVMIHQPSGGAQGQATD 143
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L + +LNG L+ TGQ LEKI D++RD+FMSAEEA YGLID V+
Sbjct: 144 IEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEEATGYGLIDKVI 198
>sp|Q8DJZ9|CLPP2_THEEB ATP-dependent Clp protease proteolytic subunit 2
OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2
PE=3 SV=1
Length = 198
Score = 233 bits (594), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 144/175 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
++ ++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI++Y+NSPGGSVTAGM
Sbjct: 19 QWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGM 78
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +LP+SRIMIHQP GG +G +D
Sbjct: 79 AIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATD 138
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I+++A E+L + LN +YHTGQ LEKI D DRDFFMSAEEAK+YGLID V+
Sbjct: 139 IEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVI 193
>sp|B1J692|CLPP_PSEPW ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain W619) GN=clpP PE=3 SV=1
Length = 213
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQ+L+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSA 193
Query: 189 EEAKDYGLIDGV 200
A +YGLID V
Sbjct: 194 SRAAEYGLIDSV 205
>sp|Q3AF96|CLPP_CARHZ ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3
SV=1
Length = 195
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R I GGP++D +AN+++AQ+L+L+A DP KDI +Y+NSPGG +TAGM
Sbjct: 17 RSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGM 76
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+++I+PDVST+C+G AASMGAFLL+AG KGKR+SLP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATD 136
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
ID+ A E+L + LN L+ HTGQ EKI DT+RDFFMSA EAK+YG+ID V+
Sbjct: 137 IDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
>sp|Q3SI98|CLPP_THIDA ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1
Length = 212
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 153/197 (77%), Gaps = 6/197 (3%)
Query: 16 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 69
QG G PM++ R ++ S+L + R+I GPV D AN+IVAQ+L+L++ +P+K
Sbjct: 13 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDK 72
Query: 70 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 129
DI +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKRY LPNS
Sbjct: 73 DIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNS 132
Query: 130 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 189
R+MIHQPLGG QG SDI++ A E+L+ KA LNG L+ HTGQ+LE I+ DTDRD FMSAE
Sbjct: 133 RVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAE 192
Query: 190 EAKDYGLIDGVVMNPHK 206
++ YGL+D V+ + ++
Sbjct: 193 DSVKYGLVDKVLTSRNE 209
>sp|A6SY74|CLPP_JANMA ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium
sp. (strain Marseille) GN=clpP PE=3 SV=1
Length = 210
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 144/175 (82%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 32 RAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 91
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+P+VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 92 AIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASD 151
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L+ + LN L+ TG+++E+I +DTDRD FMSA+ A YG+ID V+
Sbjct: 152 IEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAAVTYGMIDKVL 206
>sp|A6Q1C1|CLPP_NITSB ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp.
(strain SB155-2) GN=clpP PE=3 SV=1
Length = 196
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 146/175 (83%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G + D +A+ IVAQLL+L+A DP+KDI +Y+NSPGG +T+GM
Sbjct: 17 RSYDIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPDKDIYLYINSPGGVITSGM 76
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
+I+DT+ +I+PDVST+C+G AASMGAFLLS+GTKGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATD 136
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++QA E+L K LN L+ +TGQ+++KI +DT+RDFFMS+EEAK+YGLID V+
Sbjct: 137 IEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191
>sp|Q4ZVM7|CLPP_PSEU2 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=clpP PE=3 SV=1
Length = 213
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +GKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQ+LE I DT+RD FMSA
Sbjct: 134 SRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSA 193
Query: 189 EEAKDYGLIDGVV 201
E A +YGLID V+
Sbjct: 194 ERAAEYGLIDSVI 206
>sp|Q87YR6|CLPP_PSESM ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=clpP PE=3 SV=2
Length = 213
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +GKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQ+LE I DT+RD FMSA
Sbjct: 134 SRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSA 193
Query: 189 EEAKDYGLIDGVV 201
E A +YGLID V+
Sbjct: 194 ERAAEYGLIDSVI 206
>sp|Q48KZ0|CLPP_PSE14 ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=clpP PE=3 SV=1
Length = 213
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +GKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQ+LE I DT+RD FMSA
Sbjct: 134 SRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSA 193
Query: 189 EEAKDYGLIDGVV 201
E A +YGLID V+
Sbjct: 194 ERAAEYGLIDSVI 206
>sp|B0KJG6|CLPP_PSEPG ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas
putida (strain GB-1) GN=clpP PE=3 SV=1
Length = 213
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 145/192 (75%), Gaps = 6/192 (3%)
Query: 15 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 68
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQ+L+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPD 73
Query: 69 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 128
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKRHCLPN 133
Query: 129 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 188
SR+MIHQPLGG QG +DI + A E+L KA LN L+YHTGQ LE I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSA 193
Query: 189 EEAKDYGLIDGV 200
A +YGLID V
Sbjct: 194 SRAAEYGLIDSV 205
>sp|Q3IF46|CLPP_PSEHT ATP-dependent Clp protease proteolytic subunit OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=clpP PE=3 SV=1
Length = 205
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 142/177 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII GPVED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGPVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA++A DYG++D V N
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSADQAVDYGIVDSVFKN 201
>sp|Q7NEW2|CLPP1_GLOVI ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter
violaceus (strain PCC 7421) GN=clpP1 PE=3 SV=1
Length = 197
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 143/177 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
++ ++ ++L RII G V+D++AN I+A +LYLD+ DP KDI +Y+NSPGGSV+AG+
Sbjct: 18 QWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGL 77
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++H+R DV+T+CVGLAASMG+FLL+AG KGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 78 AIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATD 137
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I +QA E+L+ K LN LS TGQ LE+I DTDRDFFMSAE+AK YGLID VV +
Sbjct: 138 IGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQYGLIDQVVQH 194
>sp|A7HFV9|CLPP_ANADF ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=clpP PE=3 SV=1
Length = 204
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 149/186 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RI+ G P++DD+AN+++AQLL+L++ DP+KDI +Y+NSPGGSVT+G+
Sbjct: 18 RSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGL 77
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+++++P VST+C+G AASMGAFLL+ G GKR+++PN+RIMIHQP+GG QG +D
Sbjct: 78 AIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQGQATD 137
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
ID+QA E+L KA LN L+ HT Q LE+I +DTDRD+FM A EAK+YGLID V+++ K
Sbjct: 138 IDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEYGLIDEVIVHKPK 197
Query: 207 ILQPVA 212
+ A
Sbjct: 198 ATEKKA 203
>sp|Q49VZ2|CLPP_STAS1 ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=clpP PE=3 SV=1
Length = 194
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 143/176 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 202
I++ AN +L +A LN L+ TGQ++EKI +DTDRD F+SAEEAKDYGL+D V++
Sbjct: 136 IEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYGLVDQVMV 191
>sp|B1Y6H3|CLPP_LEPCP ATP-dependent Clp protease proteolytic subunit OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=clpP
PE=3 SV=1
Length = 202
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 142/175 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 24 RAYDIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESENPDKDISFYINSPGGSVSAGM 83
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
+I+DT++ I+P VST+C+GLAASMGAFLL+AG KGKR+SLPNS+IMIHQPLGGAQG +D
Sbjct: 84 SIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQATD 143
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++ A E+L + LN L+ TGQ+LEKI DT+RD+FMS+EEA+ YGLID V+
Sbjct: 144 IEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLIDQVI 198
>sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1
Length = 217
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>sp|A0K847|CLPP_BURCH ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
cenocepacia (strain HI2424) GN=clpP PE=3 SV=1
Length = 217
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>sp|Q1BH85|CLPP_BURCA ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1
Length = 217
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp.
(strain 383) GN=clpP PE=3 SV=1
Length = 217
Score = 230 bits (586), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>sp|Q9CJM2|CLPP_PASMU ATP-dependent Clp protease proteolytic subunit OS=Pasteurella
multocida (strain Pm70) GN=clpP PE=3 SV=1
Length = 193
Score = 229 bits (585), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R+I GG VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGM 75
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ ++PD+ T+CVG A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMIHQPLGGFRGQASD 135
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I + A E+L K LN L++HTGQT+E+I DTDRD FMSAEEAK YGL+D V+
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNFMSAEEAKAYGLVDEVL 190
>sp|Q30NX1|CLPP_SULDN ATP-dependent Clp protease proteolytic subunit OS=Sulfurimonas
denitrificans (strain ATCC 33889 / DSM 1251) GN=clpP
PE=3 SV=1
Length = 196
Score = 229 bits (585), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII G V D +A+ IVAQ+L+L+A DP KDI Y+NSPGG VTAGM
Sbjct: 16 RSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPGGVVTAGM 75
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+ +IRPDV+T+CVG AASMGAFLLS+G KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 76 AIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYALPHARIMIHQPLGGAQGQATD 135
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I +QA E+L K LN L+ + Q+++K+ +DTDRD FMSAEE+K+YG+ID V++ K
Sbjct: 136 IAIQAKEILRMKEELNAILAKNCSQSIKKVEKDTDRDNFMSAEESKEYGMIDEVLLKKSK 195
>sp|Q9X5N0|CLPP2_MYXXA ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus
xanthus GN=clpP2 PE=3 SV=1
Length = 206
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R +++S+L + RI+ G ++DD+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 206
I++QA E+L KA LN + HTGQ++E++ +DTDRD+FM A EAK YG+ID + NP K
Sbjct: 138 IEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDE-IQNPRK 196
Query: 207 IL 208
++
Sbjct: 197 VV 198
>sp|B5EI27|CLPP_GEOBB ATP-dependent Clp protease proteolytic subunit OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=clpP PE=3 SV=1
Length = 199
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII GG ++D++AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATD 134
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I + A E+L K LN L+ HTGQ++EK+ DT+RD+FMS EEAK+YG+ID +V
Sbjct: 135 IHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
>sp|Q31GF1|CLPP_THICR ATP-dependent Clp protease proteolytic subunit OS=Thiomicrospira
crunogena (strain XCL-2) GN=clpP PE=3 SV=1
Length = 200
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 141/175 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 23 RSFDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGM 82
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+R I+PDVST+C+G AASMG+FLLSAG +GKRY+LPNSR+MIHQPLGG QG SD
Sbjct: 83 AIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYALPNSRVMIHQPLGGFQGQASD 142
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I++ A E++ K LN L+ HTGQ +E I DTDRD FMSA+EA DYGL+D V+
Sbjct: 143 IEIHAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNFMSADEACDYGLVDKVL 197
>sp|C6E2T0|CLPP_GEOSM ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp.
(strain M21) GN=clpP PE=3 SV=1
Length = 199
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + RII GG ++D++AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATD 134
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 201
I + A E+L K LN L+ HTGQ++EK+ DT+RD+FMS EEAK+YG+ID +V
Sbjct: 135 IHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
>sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subunit OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1
Length = 217
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 145/177 (81%)
Query: 27 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 86
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 87 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 146
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 147 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 203
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+++AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLLK 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,913,607
Number of Sequences: 539616
Number of extensions: 3828426
Number of successful extensions: 9896
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8886
Number of HSP's gapped (non-prelim): 806
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)