Query 027914
Match_columns 217
No_of_seqs 115 out of 1185
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:44:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8k_A Hydrolase, carbon-nitro 100.0 1.6E-45 5.5E-50 297.7 22.2 201 3-217 15-218 (281)
2 3ivz_A Nitrilase; alpha-beta s 100.0 5.2E-45 1.8E-49 292.1 21.7 193 9-217 2-195 (262)
3 3hkx_A Amidase; alpha-beta-BET 100.0 1.8E-45 6.2E-50 297.7 16.5 200 4-217 16-217 (283)
4 2w1v_A Nitrilase-2, nitrilase 100.0 1.6E-44 5.5E-49 291.3 20.9 199 7-217 2-206 (276)
5 1f89_A 32.5 kDa protein YLR351 100.0 1.2E-44 4.1E-49 294.1 19.1 205 2-217 4-222 (291)
6 2vhh_A CG3027-PA; hydrolase; 2 100.0 1.4E-43 4.7E-48 299.1 21.5 207 5-217 69-287 (405)
7 1uf5_A N-carbamyl-D-amino acid 100.0 3.6E-43 1.2E-47 286.8 21.9 208 7-217 2-233 (303)
8 2e11_A Hydrolase; dimethylarse 100.0 7.2E-44 2.4E-48 286.0 16.1 193 7-217 2-201 (266)
9 4f4h_A Glutamine dependent NAD 100.0 3.2E-42 1.1E-46 301.0 19.0 199 4-217 2-223 (565)
10 3n05_A NH(3)-dependent NAD(+) 100.0 1.2E-41 4E-46 299.8 19.6 200 5-217 1-218 (590)
11 2uxy_A Aliphatic amidase; nitr 100.0 4.4E-41 1.5E-45 278.4 21.8 195 7-217 11-218 (341)
12 3ilv_A Glutamine-dependent NAD 100.0 1.3E-41 4.3E-46 301.1 18.4 200 6-217 3-220 (634)
13 2dyu_A Formamidase; AMIF, CEK, 100.0 7.2E-41 2.5E-45 276.4 21.0 196 7-217 12-218 (334)
14 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.5E-41 8.5E-46 288.9 16.8 201 6-217 12-222 (440)
15 3sdb_A Glutamine-dependent NAD 100.0 4.1E-38 1.4E-42 280.1 18.9 200 6-216 10-232 (680)
16 3hkx_A Amidase; alpha-beta-BET 87.3 2.8 9.6E-05 32.8 8.2 68 34-118 175-244 (283)
17 3obe_A Sugar phosphate isomera 81.5 6.6 0.00023 30.9 8.0 74 8-92 89-168 (305)
18 3p8k_A Hydrolase, carbon-nitro 80.0 5.5 0.00019 31.0 7.0 67 35-118 177-245 (281)
19 3ivz_A Nitrilase; alpha-beta s 79.8 5.9 0.0002 30.4 7.0 65 34-118 156-222 (262)
20 3ngf_A AP endonuclease, family 78.1 18 0.00061 27.5 9.4 62 22-93 88-150 (269)
21 2dyu_A Formamidase; AMIF, CEK, 75.4 11 0.00037 30.2 7.6 68 34-118 176-245 (334)
22 4f4h_A Glutamine dependent NAD 75.0 6.7 0.00023 34.1 6.6 69 35-118 180-250 (565)
23 1k77_A EC1530, hypothetical pr 74.0 25 0.00087 26.3 9.4 62 22-92 80-142 (260)
24 2uxy_A Aliphatic amidase; nitr 73.8 10 0.00036 30.4 7.2 68 34-118 176-245 (341)
25 3tva_A Xylose isomerase domain 73.4 11 0.00038 29.0 7.1 61 22-92 97-157 (290)
26 1f89_A 32.5 kDa protein YLR351 71.4 7.4 0.00025 30.3 5.6 66 36-117 181-249 (291)
27 2e11_A Hydrolase; dimethylarse 71.0 15 0.00051 28.1 7.2 61 40-117 165-228 (266)
28 3n05_A NH(3)-dependent NAD(+) 70.2 22 0.00075 30.9 8.8 70 34-118 174-245 (590)
29 3cqj_A L-ribulose-5-phosphate 69.5 16 0.00056 28.1 7.3 62 23-92 104-165 (295)
30 3kws_A Putative sugar isomeras 66.6 21 0.00071 27.4 7.3 65 23-93 100-165 (287)
31 2w1v_A Nitrilase-2, nitrilase 65.0 12 0.00041 28.8 5.6 67 35-117 164-233 (276)
32 3l23_A Sugar phosphate isomera 64.4 44 0.0015 26.0 8.9 59 23-92 104-164 (303)
33 2hk0_A D-psicose 3-epimerase; 63.7 37 0.0013 26.3 8.3 66 23-93 103-170 (309)
34 3dx5_A Uncharacterized protein 62.5 32 0.0011 26.1 7.7 76 8-92 61-141 (286)
35 3qc0_A Sugar isomerase; TIM ba 62.4 20 0.0007 27.0 6.5 65 22-93 78-142 (275)
36 2gx8_A NIF3-related protein; s 62.4 20 0.00067 29.7 6.5 59 154-217 66-126 (397)
37 2fyw_A Conserved hypothetical 62.3 25 0.00087 27.2 6.9 59 154-217 40-100 (267)
38 4fva_A 5'-tyrosyl-DNA phosphod 62.1 7.8 0.00027 28.7 3.9 38 9-49 12-53 (256)
39 4f1h_A Tyrosyl-DNA phosphodies 61.0 19 0.00064 26.1 5.9 40 7-49 2-43 (250)
40 1i60_A IOLI protein; beta barr 60.0 24 0.00082 26.6 6.5 61 23-92 80-141 (278)
41 1nmo_A Hypothetical protein YB 57.1 24 0.00082 27.0 5.9 57 154-217 37-96 (247)
42 3teb_A Endonuclease/exonucleas 57.1 21 0.0007 26.7 5.6 42 7-51 2-45 (266)
43 2qw5_A Xylose isomerase-like T 56.6 54 0.0018 25.7 8.2 65 23-92 105-182 (335)
44 3cny_A Inositol catabolism pro 56.0 50 0.0017 25.2 7.8 66 22-92 85-159 (301)
45 3ayv_A Putative uncharacterize 55.6 28 0.00095 26.0 6.1 64 23-92 72-135 (254)
46 1ems_A Nitfhit, NIT-fragIle hi 54.8 19 0.00066 29.9 5.4 67 36-118 181-250 (440)
47 3tif_A Uncharacterized ABC tra 54.4 11 0.00037 28.5 3.5 44 74-118 183-226 (235)
48 2yyb_A Hypothetical protein TT 53.6 26 0.00089 26.7 5.6 57 154-217 38-96 (242)
49 4h41_A Putative alpha-L-fucosi 53.3 61 0.0021 26.1 7.9 69 26-95 53-121 (340)
50 2nyd_A UPF0135 protein SA1388; 52.3 26 0.0009 28.6 5.7 58 154-217 42-101 (370)
51 1uf5_A N-carbamyl-D-amino acid 50.6 48 0.0017 25.6 6.9 41 78-118 218-260 (303)
52 3bdk_A D-mannonate dehydratase 50.3 56 0.0019 26.8 7.4 40 8-47 77-124 (386)
53 2j6v_A UV endonuclease, UVDE; 50.2 78 0.0027 24.8 8.0 66 23-93 57-122 (301)
54 2vhh_A CG3027-PA; hydrolase; 2 50.2 22 0.00075 29.3 5.0 42 37-94 247-288 (405)
55 1vli_A Spore coat polysacchari 49.1 45 0.0015 27.4 6.5 72 23-96 40-123 (385)
56 3rjt_A Lipolytic protein G-D-S 48.5 51 0.0017 23.3 6.4 60 22-90 112-171 (216)
57 2ei9_A Non-LTR retrotransposon 48.0 26 0.00087 26.4 4.7 38 6-49 5-42 (240)
58 3vni_A Xylose isomerase domain 47.9 70 0.0024 24.3 7.4 64 23-93 84-151 (294)
59 4gz1_A Tyrosyl-DNA phosphodies 47.7 19 0.00064 26.5 3.9 40 7-49 8-49 (256)
60 1iuq_A Glycerol-3-phosphate ac 47.7 45 0.0015 27.2 6.2 60 23-89 206-267 (367)
61 3qxb_A Putative xylose isomera 47.3 32 0.0011 26.8 5.4 65 23-92 110-177 (316)
62 3ff4_A Uncharacterized protein 46.2 33 0.0011 23.1 4.6 42 26-91 68-109 (122)
63 3hp4_A GDSL-esterase; psychrot 45.1 51 0.0018 22.8 5.8 69 10-91 68-141 (185)
64 3u0h_A Xylose isomerase domain 44.7 55 0.0019 24.6 6.3 62 22-92 79-140 (281)
65 4hf7_A Putative acylhydrolase; 43.9 85 0.0029 22.5 7.0 66 21-91 99-164 (209)
66 2qul_A D-tagatose 3-epimerase; 43.6 39 0.0013 25.6 5.3 66 23-93 84-152 (290)
67 2q02_A Putative cytoplasmic pr 43.4 99 0.0034 23.0 8.5 71 9-92 65-138 (272)
68 1wdu_A TRAS1 ORF2P; four-layer 42.8 27 0.00093 25.9 4.2 39 9-51 18-56 (245)
69 1vyb_A ORF2 contains A reverse 42.3 39 0.0013 24.5 5.0 41 7-51 6-46 (238)
70 2zds_A Putative DNA-binding pr 42.2 63 0.0022 25.1 6.4 65 23-92 107-178 (340)
71 1tz9_A Mannonate dehydratase; 39.3 1.4E+02 0.0049 23.7 9.9 38 9-46 69-114 (367)
72 4gew_A 5'-tyrosyl-DNA phosphod 39.2 71 0.0024 25.6 6.4 39 8-49 119-159 (362)
73 2vup_A Glutathione peroxidase- 39.1 98 0.0033 21.8 6.6 26 21-46 62-87 (190)
74 2gs3_A PHGPX, GPX-4, phospholi 39.1 98 0.0033 21.7 7.5 27 21-47 63-89 (185)
75 3ilv_A Glutamine-dependent NAD 38.8 40 0.0014 29.6 5.1 69 35-118 177-247 (634)
76 1ivn_A Thioesterase I; hydrola 38.2 99 0.0034 21.5 7.5 69 10-91 64-137 (190)
77 3mpr_A Putative endonuclease/e 37.8 70 0.0024 24.5 6.0 22 26-50 32-53 (298)
78 4eo3_A Bacterioferritin comigr 37.8 40 0.0014 26.7 4.6 22 103-124 102-123 (322)
79 1k7c_A Rhamnogalacturonan acet 37.8 95 0.0032 22.8 6.5 19 73-91 149-167 (233)
80 2pcj_A ABC transporter, lipopr 37.4 20 0.00069 26.7 2.6 41 74-116 178-218 (224)
81 3g91_A MTH0212, exodeoxyribonu 36.7 46 0.0016 24.9 4.6 40 8-52 3-42 (265)
82 1j5p_A Aspartate dehydrogenase 36.6 55 0.0019 25.1 5.0 46 28-92 72-117 (253)
83 3tc3_A UV damage endonuclease; 36.2 1.6E+02 0.0055 23.3 7.9 66 22-92 55-120 (310)
84 2wqp_A Polysialic acid capsule 35.1 53 0.0018 26.6 4.8 72 23-96 31-113 (349)
85 1g6h_A High-affinity branched- 34.1 50 0.0017 25.1 4.4 69 33-117 164-233 (257)
86 1oxx_K GLCV, glucose, ABC tran 33.9 44 0.0015 27.0 4.2 67 36-117 154-221 (353)
87 3tui_C Methionine import ATP-b 33.0 26 0.0009 28.5 2.8 67 36-117 177-244 (366)
88 1xla_A D-xylose isomerase; iso 33.0 1.6E+02 0.0055 23.8 7.6 64 23-92 112-179 (394)
89 2obi_A PHGPX, GPX-4, phospholi 33.0 1.2E+02 0.0042 21.0 7.0 26 21-46 61-86 (183)
90 2ihy_A ABC transporter, ATP-bi 31.8 65 0.0022 24.9 4.8 66 36-117 175-243 (279)
91 3dmy_A Protein FDRA; predicted 30.6 80 0.0027 26.7 5.4 48 26-94 46-93 (480)
92 3p94_A GDSL-like lipase; serin 30.5 1.4E+02 0.0047 20.8 7.4 77 9-91 75-159 (204)
93 3p6l_A Sugar phosphate isomera 30.4 1.1E+02 0.0039 22.6 6.0 57 9-92 77-133 (262)
94 1eiw_A Hypothetical protein MT 30.1 43 0.0015 22.2 3.0 37 173-217 37-73 (111)
95 2wlt_A L-asparaginase; hydrola 30.1 87 0.003 25.0 5.3 60 150-217 218-277 (332)
96 3nxk_A Cytoplasmic L-asparagin 30.0 90 0.0031 25.0 5.4 60 150-217 220-280 (334)
97 3g12_A Putative lactoylglutath 30.0 93 0.0032 20.2 4.9 41 76-119 77-118 (128)
98 2yv1_A Succinyl-COA ligase [AD 29.9 1.1E+02 0.0039 23.8 5.9 47 26-93 80-127 (294)
99 2o3h_A DNA-(apurinic or apyrim 29.8 1.1E+02 0.0038 22.9 5.8 39 8-52 28-67 (285)
100 1o7j_A L-asparaginase; atomic 29.5 91 0.0031 24.8 5.3 60 150-217 217-276 (327)
101 3lmz_A Putative sugar isomeras 29.4 1E+02 0.0034 22.9 5.5 45 25-92 87-131 (257)
102 1wsa_A Asparaginase, asparagin 29.4 89 0.003 24.9 5.3 60 150-217 215-274 (330)
103 2it1_A 362AA long hypothetical 28.9 46 0.0016 27.0 3.6 43 74-117 171-214 (362)
104 2yvq_A Carbamoyl-phosphate syn 28.7 59 0.002 22.4 3.7 44 164-215 86-129 (143)
105 3gfo_A Cobalt import ATP-bindi 28.5 74 0.0025 24.6 4.6 67 36-117 157-224 (275)
106 3nvt_A 3-deoxy-D-arabino-heptu 28.3 1.9E+02 0.0066 23.6 7.2 60 25-96 154-215 (385)
107 2d59_A Hypothetical protein PH 28.2 1.4E+02 0.0049 20.2 5.8 43 27-93 88-130 (144)
108 3d31_A Sulfate/molybdate ABC t 27.7 45 0.0015 26.9 3.3 43 74-117 165-208 (348)
109 3ewb_X 2-isopropylmalate synth 27.5 1.4E+02 0.0049 23.2 6.1 31 19-49 113-143 (293)
110 1nns_A L-asparaginase II; amid 27.2 1E+02 0.0034 24.6 5.2 60 150-217 211-270 (326)
111 3me7_A Putative uncharacterize 26.5 55 0.0019 22.8 3.3 41 77-121 104-145 (170)
112 1z47_A CYSA, putative ABC-tran 25.5 42 0.0014 27.1 2.7 43 74-117 183-226 (355)
113 2yyz_A Sugar ABC transporter, 25.3 49 0.0017 26.8 3.1 67 36-117 147-214 (359)
114 2p31_A CL683, glutathione pero 25.3 1.7E+02 0.0059 20.2 6.9 15 105-119 149-163 (181)
115 2yz2_A Putative ABC transporte 25.0 82 0.0028 24.0 4.2 68 33-116 149-217 (266)
116 3drn_A Peroxiredoxin, bacterio 25.0 1.6E+02 0.0055 19.8 6.9 18 103-120 111-128 (161)
117 4e38_A Keto-hydroxyglutarate-a 24.7 1.1E+02 0.0036 23.2 4.7 37 33-95 99-135 (232)
118 1oi7_A Succinyl-COA synthetase 24.7 1.7E+02 0.0059 22.6 6.1 47 26-93 74-121 (288)
119 1g29_1 MALK, maltose transport 24.6 52 0.0018 26.7 3.2 43 74-117 177-220 (372)
120 1vpl_A ABC transporter, ATP-bi 24.6 60 0.002 24.7 3.3 42 74-117 184-226 (256)
121 4h08_A Putative hydrolase; GDS 24.5 1.8E+02 0.0063 20.3 6.4 18 74-91 140-157 (200)
122 1vr6_A Phospho-2-dehydro-3-deo 24.4 1.6E+02 0.0055 23.7 5.9 60 24-97 117-180 (350)
123 3nav_A Tryptophan synthase alp 24.2 1.2E+02 0.0039 23.5 4.9 30 155-184 211-240 (271)
124 3cpr_A Dihydrodipicolinate syn 24.0 1.4E+02 0.0047 23.4 5.4 55 25-96 96-152 (304)
125 2vc6_A MOSA, dihydrodipicolina 23.8 1.4E+02 0.0048 23.1 5.4 51 25-92 80-131 (292)
126 2l82_A Designed protein OR32; 23.8 72 0.0025 21.1 3.1 21 26-46 89-109 (162)
127 3vnd_A TSA, tryptophan synthas 23.5 1.1E+02 0.0039 23.5 4.7 30 155-184 209-238 (267)
128 2x7v_A Probable endonuclease 4 23.0 1.6E+02 0.0054 22.0 5.6 25 23-47 85-109 (287)
129 3rlf_A Maltose/maltodextrin im 23.0 44 0.0015 27.4 2.4 44 74-118 171-215 (381)
130 2vef_A Dihydropteroate synthas 23.0 85 0.0029 24.9 4.0 30 154-183 85-114 (314)
131 2g2c_A Putative molybdenum cof 22.9 54 0.0018 23.2 2.6 27 143-169 134-160 (167)
132 1yx1_A Hypothetical protein PA 22.9 88 0.003 23.4 4.1 47 27-92 84-130 (264)
133 3fvq_A Fe(3+) IONS import ATP- 22.8 61 0.0021 26.3 3.2 68 36-118 152-220 (359)
134 1xky_A Dihydrodipicolinate syn 22.7 1.3E+02 0.0044 23.5 5.1 54 25-95 92-147 (301)
135 1vs1_A 3-deoxy-7-phosphoheptul 22.7 1.2E+02 0.0042 23.5 4.8 59 25-97 50-112 (276)
136 2lrt_A Uncharacterized protein 22.6 1.5E+02 0.0051 19.8 4.9 15 104-118 115-129 (152)
137 3s81_A Putative aspartate race 22.3 78 0.0027 24.4 3.6 20 165-184 90-109 (268)
138 3mxt_A Pantothenate synthetase 22.1 24 0.00083 27.7 0.6 36 14-49 62-97 (285)
139 1gp8_A Protein (scaffolding pr 22.0 98 0.0033 16.2 2.9 19 22-40 6-24 (40)
140 3gkn_A Bacterioferritin comigr 22.0 87 0.003 21.2 3.6 27 21-47 50-76 (163)
141 2yv2_A Succinyl-COA synthetase 21.9 1.4E+02 0.0048 23.3 5.1 45 28-93 83-128 (297)
142 3tn4_A Phosphotriesterase; lac 21.9 3.1E+02 0.011 22.0 7.2 53 21-93 77-129 (360)
143 2zvr_A Uncharacterized protein 21.8 1E+02 0.0035 23.4 4.3 26 22-47 108-133 (290)
144 1muw_A Xylose isomerase; atomi 21.7 2.9E+02 0.01 22.1 7.2 65 22-92 111-179 (386)
145 3inn_A Pantothenate synthetase 21.5 24 0.00083 28.1 0.5 35 15-49 82-116 (314)
146 1mv5_A LMRA, multidrug resista 21.5 97 0.0033 23.2 4.0 67 33-116 150-216 (243)
147 1v43_A Sugar-binding transport 21.5 48 0.0016 27.0 2.3 43 74-117 179-222 (372)
148 3nvt_A 3-deoxy-D-arabino-heptu 21.3 3E+02 0.01 22.5 7.1 51 165-216 160-211 (385)
149 3tue_A Tryparedoxin peroxidase 21.1 1.3E+02 0.0045 22.4 4.5 33 80-118 130-162 (219)
150 3g6s_A Putative endonuclease/e 21.0 81 0.0028 23.4 3.5 24 24-50 25-48 (267)
151 2ixe_A Antigen peptide transpo 20.8 34 0.0012 26.3 1.3 69 33-116 167-235 (271)
152 1agx_A Glutaminase-asparaginas 20.7 1.2E+02 0.0042 24.1 4.6 60 150-217 215-275 (331)
153 3sk2_A EHPR; antibiotic resist 20.6 1.8E+02 0.0061 18.7 6.4 42 75-119 85-129 (132)
154 1geq_A Tryptophan synthase alp 20.5 2.1E+02 0.0073 21.1 5.8 30 155-184 194-223 (248)
155 1hd7_A DNA-(apurinic or apyrim 20.5 1.1E+02 0.0039 23.6 4.3 37 11-51 62-99 (318)
156 3ey7_A Biphenyl-2,3-DIOL 1,2-d 20.4 1.7E+02 0.0059 18.4 5.3 44 76-119 84-128 (133)
157 1ji0_A ABC transporter; ATP bi 20.0 61 0.0021 24.3 2.5 66 36-117 153-219 (240)
No 1
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-45 Score=297.69 Aligned_cols=201 Identities=19% Similarity=0.266 Sum_probs=178.3
Q ss_pred CCCCcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHH
Q 027914 3 KGKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQE 81 (217)
Q Consensus 3 ~~~~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 81 (217)
+++..+||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.+ +...++.. .++..+.+++
T Consensus 15 ~~~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~----~~~~a~~~-~~~~~~~l~~ 89 (281)
T 3p8k_A 15 VPRGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEH----LNEKADNN-LGQSFSFIKH 89 (281)
T ss_dssp CCTTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGG----HHHHSEET-THHHHHHHHH
T ss_pred cccCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhH----HHHhhhcc-CcHHHHHHHH
Confidence 3556789999999999 5899999999999999999999999999999999998753 33444432 3578999999
Q ss_pred HHHHcCcEEeeeee-eecCCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEec-CCceEEEEEec
Q 027914 82 LAKELGVVMPVSFF-EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGVAICW 159 (217)
Q Consensus 82 ~a~~~~i~i~~g~~-~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~-~~~~ig~~IC~ 159 (217)
+|++++++|++|.+ ++.++++||++++++++|+++..|+|+||++. |.|..+|.+|+..+.+|++ +++|+|++|||
T Consensus 90 la~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~~~~v~~~~~~~~ig~~IC~ 167 (281)
T 3p8k_A 90 LAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEYVAEPFQLSDGTYVTQLICY 167 (281)
T ss_dssp HHHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSSCCCCEECTTCCEEEEEEGG
T ss_pred HHhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCCCceeEEeCCCcEEEEEEec
Confidence 99999999999974 66788999999999999999999999999863 5788999999973389999 99999999999
Q ss_pred CCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 160 DQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 160 d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
|++||++.+.++.+|+|+|++|++|+. ....+|+.++++||+||+++||+|
T Consensus 168 D~~fpe~~r~~~~~Gadli~~psa~~~-------~~~~~~~~~~~arA~en~~~vv~~ 218 (281)
T 3p8k_A 168 DLRFPELLRYPARSGAKIAFYVAQWPM-------SRLQHWHSLLKARAIENNMFVIGT 218 (281)
T ss_dssp GGGCTHHHHHHHHTTCCEEEEEECCBG-------GGHHHHHHHHHHHHHHHTSEEEEE
T ss_pred CCCCcHHHHHHHHCCCCEEEECCCCCC-------ccHHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999999999999999753 357899999999999999999975
No 2
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=5.2e-45 Score=292.06 Aligned_cols=193 Identities=33% Similarity=0.573 Sum_probs=174.9
Q ss_pred eEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcC
Q 027914 9 VVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (217)
Q Consensus 9 ~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (217)
||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.+. .++.+.+++...++..+.++++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~-~~~~~~a~~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETR-EEVFEIAQKIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCH-HHHHHHCBCTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCH-HHHHHhcCccCCCHHHHHHHHHHHHcC
Confidence 8999999999 59999999999999999999999999999999999987642 245566665445789999999999999
Q ss_pred cEEeeeeeeecCCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEecCCceEEEEEecCCcchHHH
Q 027914 88 VVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 167 (217)
Q Consensus 88 i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~~~~~ig~~IC~d~~~p~~~ 167 (217)
++|++|++++.++++||++++++++| ++..|+|+||+ +.|..+|++|+..+.+|+++++|+|++||||++||++.
T Consensus 81 ~~iv~G~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~fpe~~ 155 (262)
T 3ivz_A 81 VYIVAGTAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESA 155 (262)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCSCEEECSSCEEEECCGGGGGSHHHH
T ss_pred cEEEEeEEEeeCCcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCceEEEECCEEEEEEEecCCCchHHH
Confidence 99999999999999999999999999 99999999995 47889999998448999999999999999999999999
Q ss_pred HHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 168 RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 168 ~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+.++.+|+|+|++|++|+. . +|..++++||+||+++||+|
T Consensus 156 r~~~~~ga~li~~ps~~~~-------~---~~~~~~~~rA~en~~~vv~~ 195 (262)
T 3ivz_A 156 RTLALKGADVIAHPANLVM-------P---YAPRAMPIRALENKVYTVTA 195 (262)
T ss_dssp HHHHHTTCSEEEEEECCCS-------S---CHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHCCCCEEEEcCCCCc-------h---HHHHHHHHHHHhcCcEEEEE
Confidence 9999999999999999642 1 69999999999999999985
No 3
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.8e-45 Score=297.70 Aligned_cols=200 Identities=21% Similarity=0.285 Sum_probs=174.1
Q ss_pred CCCcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHH
Q 027914 4 GKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (217)
Q Consensus 4 ~~~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (217)
.+..+||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.++.. ..+++. .++..+.++++
T Consensus 16 ~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~---~~a~~~-~~~~~~~l~~~ 91 (283)
T 3hkx_A 16 IRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICA---QVSAEQ-VDAARSRLRGI 91 (283)
T ss_dssp CTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHH---HCCHHH-HHHHHHHHHHH
T ss_pred ecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHH---Hhcccc-CCHHHHHHHHH
Confidence 345679999999999 5799999999999999999999999999999999998653210 222211 24678999999
Q ss_pred HHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEecCCceEEEEEecCC
Q 027914 83 AKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQ 161 (217)
Q Consensus 83 a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~~~~~ig~~IC~d~ 161 (217)
|++++++|++|++++.+ +++||++++++++|+++..|+|+||++. .|..+|.+|+..+.+|+++++|+|++||||+
T Consensus 92 a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~ 168 (283)
T 3hkx_A 92 ARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLVCYDV 168 (283)
T ss_dssp HHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECCGGGG
T ss_pred HHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEEecCc
Confidence 99999999999998875 7999999999999999999999999752 4788999998756799999999999999999
Q ss_pred cchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 162 WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 162 ~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+||++.+.++.+|+|+|++|++|+. ....+|..++++||+||+++||+|
T Consensus 169 ~fpe~~r~l~~~Ga~li~~ps~~~~-------~~~~~~~~~~~~rA~en~~~vv~~ 217 (283)
T 3hkx_A 169 EFPEMVRAAAARGAQLVLVPTALAG-------DETSVPGILLPARAVENGITLAYA 217 (283)
T ss_dssp GSHHHHHHHHHTTCSEEEEECCCBS-------CCTHHHHTHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHCCCCEEEECCCCCC-------cccHHHHHHHHHHHHHhCCEEEEE
Confidence 9999999999999999999999753 123789999999999999999985
No 4
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.6e-44 Score=291.25 Aligned_cols=199 Identities=30% Similarity=0.441 Sum_probs=173.7
Q ss_pred cceEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHc
Q 027914 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (217)
Q Consensus 7 ~~~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (217)
.+||||++|+++.+|.+.|++++.+++++|.++|+|||||||++++||.+.. +...++.. .++..+.++++|+++
T Consensus 2 ~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~----~~~~~~~~-~~~~~~~l~~~a~~~ 76 (276)
T 2w1v_A 2 STFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTY----FPDYAEKI-PGESTQKLSEVAKES 76 (276)
T ss_dssp CEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTT----HHHHCBCS-SSHHHHHHHHHHHHH
T ss_pred CccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHH----HHHHhccC-CCHHHHHHHHHHHHc
Confidence 4699999999998899999999999999999999999999999999997654 23334433 267899999999999
Q ss_pred CcEEeee-eeeecCCceEEEEEEECCCCCeeeeeecccCC-----CCCCCcccccccCCCCCceeEecCCceEEEEEecC
Q 027914 87 GVVMPVS-FFEEANNAHYNSIAIIDADGSDLGLYRKSHIP-----DGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWD 160 (217)
Q Consensus 87 ~i~i~~g-~~~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~-----~~~~~~e~~~~~~g~~~~~~~~~~~~~ig~~IC~d 160 (217)
+++|++| ..++.++++||++++++++|+++..|+|+||+ .++.|.|..+|.+|+. +.+|+++++|+|++||||
T Consensus 77 ~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD 155 (276)
T 2w1v_A 77 SIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGICYD 155 (276)
T ss_dssp TSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCEEEECCGGG
T ss_pred CeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCceEEEEEEec
Confidence 9999999 45666789999999999999999999999993 2223568889999987 789999999999999999
Q ss_pred CcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 161 QWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 161 ~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
++||++.+.++++|+|+|++|++|+.. .+..+|..++++||+||++|||+|
T Consensus 156 ~~fpe~~r~~~~~ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~ 206 (276)
T 2w1v_A 156 MRFAELAQIYAQRGCQLLVYPGAFNLT------TGPAHWELLQRARAVDNQVYVATA 206 (276)
T ss_dssp GGCHHHHHHHHHTTEEEEEEECCCCTT------HHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cccHHHHHHHHHcCCCEEEECCcCCCc------CCHHHHHHHHHHHHHHcCcEEEEe
Confidence 999999999999999999999986531 246899999999999999999975
No 5
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.2e-44 Score=294.07 Aligned_cols=205 Identities=25% Similarity=0.412 Sum_probs=174.7
Q ss_pred CCCCCcceEEEEEecc-CCCCHHHHHHHHHHHHHHH--HhCCCcEEEecCcccCcccCccchhhHHhhcCCC-CC--ChH
Q 027914 2 EKGKRREVVVSALQFA-CTDDVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPY-KD--HPT 75 (217)
Q Consensus 2 ~~~~~~~~~ia~vQ~~-~~~~~~~n~~~~~~~i~~a--~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~-~~--~~~ 75 (217)
+++|+++||||++|++ ..+|.+.|++++.+++++| .++|+|||||||++++||.+.. +...++.. .+ ++.
T Consensus 4 ~~~m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~----~~~~~~~~~~~~~~~~ 79 (291)
T 1f89_A 4 SKILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQ----FRKYSEVINPKEPSTS 79 (291)
T ss_dssp SSSBSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHH----HHHHTTBCCSSSCCHH
T ss_pred cccccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHH----HHHHhhhhccCCCChH
Confidence 4566778999999999 4789999999999999999 8899999999999999986432 33444433 23 578
Q ss_pred HHHHHHHHHHcCcEEeeee-eeecC--CceEEEEEEECCCCCeeeeeecccCCC-----CCCCcccccccCCCCCceeEe
Q 027914 76 ILKMQELAKELGVVMPVSF-FEEAN--NAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKVFQ 147 (217)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~-~~~~~--~~~~Ns~~~i~~~G~~~~~y~K~~L~~-----~~~~~e~~~~~~g~~~~~~~~ 147 (217)
.+.++++|++++++|++|. +++.+ +++||++++++++|+++..|+|+||++ ...|.|..+|.+|+. +.+|+
T Consensus 80 ~~~l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~v~~ 158 (291)
T 1f89_A 80 VQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-STTID 158 (291)
T ss_dssp HHHHHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CEEEE
T ss_pred HHHHHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-CceEe
Confidence 9999999999999999995 56665 789999999999999999999999953 224568889999987 78999
Q ss_pred cCCceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 148 TKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 148 ~~~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
++++|+|++||||++||++.+.++.+|+|+|++|++|+.. .+..+|..++++||+||++|||+|
T Consensus 159 ~~~~~ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~ 222 (291)
T 1f89_A 159 TKYGKFGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTV------TGPLHWHLLARSRAVDNQVYVMLC 222 (291)
T ss_dssp ETTEEEEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTT------HHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred cCCeeEEEEEecccCchHHHHHHHhhCCCEEEECCcCCCC------CcHHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999999999999999999999986531 357899999999999999999975
No 6
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=1.4e-43 Score=299.07 Aligned_cols=207 Identities=29% Similarity=0.418 Sum_probs=167.6
Q ss_pred CCcceEEEEEeccCC--------CCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc-hhhHHhhcCCCCCChH
Q 027914 5 KRREVVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPT 75 (217)
Q Consensus 5 ~~~~~~ia~vQ~~~~--------~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-~~~~~~~~~~~~~~~~ 75 (217)
+.+.||||++|+++. ++.+.|++++.+++++|+++|+|||||||++++||..... ...+...++....+++
T Consensus 69 ~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~ 148 (405)
T 2vhh_A 69 KRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPT 148 (405)
T ss_dssp CCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHH
T ss_pred CCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHH
Confidence 345799999999973 3678999999999999999999999999999998853211 1112334444334688
Q ss_pred HHHHHHHHHHcCcEEeeeeeeec---CCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEecCCce
Q 027914 76 ILKMQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAK 152 (217)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~~---~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~~~~~ 152 (217)
.+.++++|++++++|++|++++. ++++|||+++++++|+++..|+|+||++++.|.|..+|.+|+..+.+|+++++|
T Consensus 149 ~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~r 228 (405)
T 2vhh_A 149 TKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGK 228 (405)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEE
T ss_pred HHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEE
Confidence 99999999999999999998876 578999999999999999999999999888888999999998657899999999
Q ss_pred EEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 153 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 153 ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
||++||||++||+.++.++.+|+|+|++|++|... .+..+|..++++||+||++|||+|
T Consensus 229 iG~~ICyD~~fPe~~r~la~~GAdill~psa~~~~------~~~~~w~~l~raRAiEn~~~Vv~a 287 (405)
T 2vhh_A 229 LAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGR------LSEPLWSIEARNAAIANSYFTVPI 287 (405)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBCT------TTHHHHHHHHHHHHHHHTSEEEEE
T ss_pred EEEEEeccccChHHHHHHHHcCCCEEEEcccCCCC------CCHHHHHHHHHHHHHHcCceEEEe
Confidence 99999999999999999999999999999996421 357899999999999999999975
No 7
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=3.6e-43 Score=286.85 Aligned_cols=208 Identities=27% Similarity=0.386 Sum_probs=172.2
Q ss_pred cceEEEEEeccCC---CCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc--h----hhHHhhcCCCCCChHHH
Q 027914 7 REVVVSALQFACT---DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--R----EDFFQRAKPYKDHPTIL 77 (217)
Q Consensus 7 ~~~~ia~vQ~~~~---~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~--~----~~~~~~~~~~~~~~~~~ 77 (217)
++||||++|+++. +|.+.|++++.+++++|+++|+|||||||++++||.+..+ . ..+.+.++ .++.++
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~---~~~~~~ 78 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEM---PGPVVR 78 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSS---SCTTTH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcC---CCHHHH
Confidence 4699999999984 7999999999999999999999999999999999976532 1 11112211 357889
Q ss_pred HHHHHHHHcCcEEeeeeeeec-CC---ceEEEEEEECCCCCeeeeeecccCCCCC------CC--cccccccCCCCCcee
Q 027914 78 KMQELAKELGVVMPVSFFEEA-NN---AHYNSIAIIDADGSDLGLYRKSHIPDGP------GY--QEKFYFNPGDTGFKV 145 (217)
Q Consensus 78 ~l~~~a~~~~i~i~~g~~~~~-~~---~~~Ns~~~i~~~G~~~~~y~K~~L~~~~------~~--~e~~~~~~g~~~~~~ 145 (217)
.++++|++++++|++|++++. ++ ++||++++++++|+++..|+|+||++.+ .| .|..+|.+|+..+.+
T Consensus 79 ~l~~~a~~~~~~iv~G~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v 158 (303)
T 1uf5_A 79 PLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPV 158 (303)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCE
T ss_pred HHHHHHHHhCeEEEEeeeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCce
Confidence 999999999999999998764 45 7999999999999999999999997332 23 577899999833789
Q ss_pred EecCCceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCC---CCHHHHHHHhhhhhccccEEEEeC
Q 027914 146 FQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGL---DSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 146 ~~~~~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~---~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
|+++++|+|++||||++||++.+.++++|+|+|++|+++++++...+. ....+|..++++||+||++|||+|
T Consensus 159 ~~~~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 233 (303)
T 1uf5_A 159 YDVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAA 233 (303)
T ss_dssp EEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EecCCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEE
Confidence 999999999999999999999999999999999999885433221100 056789999999999999999975
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.2e-44 Score=286.01 Aligned_cols=193 Identities=18% Similarity=0.261 Sum_probs=169.5
Q ss_pred cceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHH
Q 027914 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (217)
Q Consensus 7 ~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (217)
.+||||++|+++ .+|.+.|++++.+++++| ++|+|||||||++++||.... ...++.. .++..+.++++|++
T Consensus 2 ~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~-----~~~a~~~-~~~~~~~l~~~a~~ 74 (266)
T 2e11_A 2 HDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEA-----IDKAEDM-DGPTVAWIRTQAAR 74 (266)
T ss_dssp CCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGG-----GGGCEET-TSHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhH-----HHhhccC-CCHHHHHHHHHHHH
Confidence 469999999999 589999999999999999 889999999999999996432 2223222 36789999999999
Q ss_pred cCcEEeeeeeeecCCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEecCCceEEEEEecCCcchH
Q 027914 86 LGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPE 165 (217)
Q Consensus 86 ~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~~~~~ig~~IC~d~~~p~ 165 (217)
++++|++|++++.++++||++++++++|+++ .|+|+||+++ +.|..+|.+|+. +.+|+++++|+|++||||++||+
T Consensus 75 ~~~~iv~G~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~~fpe 150 (266)
T 2e11_A 75 LGAAITGSVQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVCYDLRFPV 150 (266)
T ss_dssp HTSEEEEEEEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEGGGGGCTT
T ss_pred hCCEEEEeeeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEEeccCCHH
Confidence 9999999999888889999999999999999 9999999874 357889999986 78999999999999999999999
Q ss_pred HHHHHH---Hc---CCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 166 AARAMV---LQ---GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 166 ~~~~~~---~~---g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+.+.++ ++ |+|+|++|++|+. ....+|+.++++||+||+++||+|
T Consensus 151 ~~r~~~~~~~~~~~ga~~i~~~s~w~~-------~~~~~~~~~~~~rA~en~~~vv~a 201 (266)
T 2e11_A 151 FCRNRFDVERPGQLDFDLQLFVANWPS-------ARAYAWKTLLRARAIENLCFVAAV 201 (266)
T ss_dssp TTCCCBSSSSTTSBSCSEEEEEECCCG-------GGHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhhhhccCCCCcEEEEeCCCCC-------CchHHHHHHHHHHHHhcCcEEEEE
Confidence 998864 43 9999999999653 356789999999999999999985
No 9
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=3.2e-42 Score=301.00 Aligned_cols=199 Identities=24% Similarity=0.335 Sum_probs=168.9
Q ss_pred CCCcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccch--hhHHhhcCCCCCChHHHHHH
Q 027914 4 GKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQR--EDFFQRAKPYKDHPTILKMQ 80 (217)
Q Consensus 4 ~~~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 80 (217)
|.+.+||||++|+++ .+|++.|++++.+++++|+++|||||||||+++|||++.++. +.+...+ .+.+.
T Consensus 2 p~sMkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~~~--------~~~l~ 73 (565)
T 4f4h_A 2 PGSMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYAAS--------DAALA 73 (565)
T ss_dssp ----CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHHHH--------HHHHH
T ss_pred CCCcceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHHHH--------HHHHH
Confidence 445679999999999 689999999999999999999999999999999999998762 2232222 23334
Q ss_pred HHHH----HcCcEEeeeeeeecC----------------CceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCC
Q 027914 81 ELAK----ELGVVMPVSFFEEAN----------------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGD 140 (217)
Q Consensus 81 ~~a~----~~~i~i~~g~~~~~~----------------~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~ 140 (217)
++++ ..++.+++|++.+.. +++||+++++. +|++++.|+|+|||+++.|.|.++|.+|+
T Consensus 74 ~la~~~~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~ 152 (565)
T 4f4h_A 74 ELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDA 152 (565)
T ss_dssp HHHHHHTTSTTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCC
T ss_pred HHHHHhhhcCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCC
Confidence 4433 357999999876532 35899999995 79999999999999999999999999999
Q ss_pred CCceeEecCCceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 141 TGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 141 ~~~~~~~~~~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
. +.+++++++|||+.||||+|||+..+.++..|+|+|++|++ +|+.. ...++|..+++.||+||++++|||
T Consensus 153 ~-~~v~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psA---s~~~~--gk~~~r~~ll~arA~e~~~~vvy~ 223 (565)
T 4f4h_A 153 A-PYVFELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNG---SPYHM--NKDAVRIDILRARIRETGLPMVYV 223 (565)
T ss_dssp C-CCEEEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEEC---CBCCT--THHHHHHHHHHHHHHHHCCCEEEE
T ss_pred c-ceeEEecCcEEEEEEeehhcccchhHHHHhCCCeeeecccc---ccccc--CcHHHHHHHHHHHHHHhCCcEEEe
Confidence 8 79999999999999999999999999999999999999999 45433 457899999999999999999986
No 10
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=1.2e-41 Score=299.79 Aligned_cols=200 Identities=22% Similarity=0.281 Sum_probs=176.0
Q ss_pred CCcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHH
Q 027914 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (217)
Q Consensus 5 ~~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (217)
|+++||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||++.++..... . ..+..+.++++|
T Consensus 1 M~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~-~-----~~~~~~~l~~la 74 (590)
T 3n05_A 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS-F-----VEASRTALRELA 74 (590)
T ss_dssp -CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHH-H-----HHHHHHHHHHHH
T ss_pred CCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHH-H-----HHHHHHHHHHHH
Confidence 56789999999999 6999999999999999999999999999999999999876521100 0 124568899999
Q ss_pred HHc--C----cEEeeeeeeecC----------CceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEe
Q 027914 84 KEL--G----VVMPVSFFEEAN----------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147 (217)
Q Consensus 84 ~~~--~----i~i~~g~~~~~~----------~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~ 147 (217)
+++ + ++|++|++++.+ +++||++++++ +|+++..|+|+||++++.|.|.++|.+|+. +.+|+
T Consensus 75 ~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~-~~v~~ 152 (590)
T 3n05_A 75 ARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPIVR 152 (590)
T ss_dssp HHHHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-EEEEE
T ss_pred HhhhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-ceEEE
Confidence 988 6 999999988753 37999999997 999999999999999999999999999997 89999
Q ss_pred cCCceEEEEEecCCcc-hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 148 TKFAKIGVAICWDQWF-PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 148 ~~~~~ig~~IC~d~~~-p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
++++|||++||||+|| |++.+.++.+|+|+|++|++ +||.. ...++|..++++||+||++++|+|
T Consensus 153 ~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa---~p~~~--gk~~~~~~l~~~rA~e~~~~vv~a 218 (590)
T 3n05_A 153 LHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNA---SPYER--DKDDTRLELVRKRAQEAGCTTAYL 218 (590)
T ss_dssp ETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEEC---CBCCC--CSSCHHHHHHHHHHHHHTSEEEEE
T ss_pred ECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecC---Ccccc--CcHHHHHHHHHHHHHHhCCEEEEE
Confidence 9999999999999999 99999999999999999999 45543 346789999999999999999986
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=4.4e-41 Score=278.38 Aligned_cols=195 Identities=19% Similarity=0.184 Sum_probs=167.3
Q ss_pred cceEEEEEeccCC-----CCHHHHHHHHHHHHHHHHh--CCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHH
Q 027914 7 REVVVSALQFACT-----DDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (217)
Q Consensus 7 ~~~~ia~vQ~~~~-----~~~~~n~~~~~~~i~~a~~--~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (217)
++||||++|++++ +|++.|++++.+++++|++ +|+|||||||++++||.... .++...++.. .++.++.|
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~--~~~~~~a~~~-~~~~~~~l 87 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDP--AEMMETAVAI-PGEETEIF 87 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSH--HHHHHHCBCS-SSHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCH--HHHHHHhccC-CCHHHHHH
Confidence 5899999999952 5789999999999999987 79999999999999975432 2344455443 36889999
Q ss_pred HHHHHHcCcEEeeeee-eecC----CceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEec-CCceE
Q 027914 80 QELAKELGVVMPVSFF-EEAN----NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKI 153 (217)
Q Consensus 80 ~~~a~~~~i~i~~g~~-~~~~----~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~-~~~~i 153 (217)
+++|+++++++++|++ ++.+ +++||++++++++|+++..|+|+||+. |..+|.+|+. ..+|++ .|.|+
T Consensus 88 ~~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~-----e~~~f~pG~~-~~v~~~~~G~ri 161 (341)
T 2uxy_A 88 SRACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC-----PIEGWYPGGQ-TYVSEGPKGMKI 161 (341)
T ss_dssp HHHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCBCCCC-CCCEECGGGCEE
T ss_pred HHHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC-----CccceeCCCC-ceEEECCCCCEE
Confidence 9999999999999988 7643 349999999999999999999999853 4457899987 679999 56699
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
|++||||++|||++|.++.+|+|+|++|++|+. ...++|..++++||+||+++||+|
T Consensus 162 G~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~-------~~~~~~~~l~~arA~En~~~vv~a 218 (341)
T 2uxy_A 162 SLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMY-------PAKDQQVMMAKAMAWANNCYVAVA 218 (341)
T ss_dssp EEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBT-------TCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCC-------CcHHHHHHHHHHHHHhCCcEEEEE
Confidence 999999999999999999999999999999653 357899999999999999999985
No 12
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.3e-41 Score=301.14 Aligned_cols=200 Identities=16% Similarity=0.194 Sum_probs=167.8
Q ss_pred CcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHH
Q 027914 6 RREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (217)
Q Consensus 6 ~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (217)
+..||||++|+++ .+|++.|++++.+.+++|+++|+|||||||++++||++.++.. +... ..+..+.++++|+
T Consensus 3 M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~---~~~~---~~~~~~~l~~la~ 76 (634)
T 3ilv_A 3 LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFL---TDWV---AETAIEYCFEIAA 76 (634)
T ss_dssp -CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGG---SHHH---HHHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhh---Chhh---hHHHHHHHHHHHH
Confidence 4579999999999 5899999999999999999999999999999999999876521 1000 1356788999999
Q ss_pred Hc-CcEEeeeeeeecCCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCC---------------ceeEec
Q 027914 85 EL-GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG---------------FKVFQT 148 (217)
Q Consensus 85 ~~-~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~---------------~~~~~~ 148 (217)
+. ++.|++|++++.++++||+++++ ++|++++.|+|+||++++.|.|.++|.||+.. ..+|++
T Consensus 77 ~~~~i~ivvG~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~ 155 (634)
T 3ilv_A 77 SCTDITVSLGLPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNV 155 (634)
T ss_dssp TCTTSEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEE
T ss_pred hCCCCEEEEeeeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccCCeEEEE
Confidence 96 99999999999899999999999 89999999999999999999999999999862 168999
Q ss_pred CCceEEEEEecCCcchH-HHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 149 KFAKIGVAICWDQWFPE-AARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 149 ~~~~ig~~IC~d~~~p~-~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+++|||+.||||+|||+ +++.++.+|+|+|++|++ +||.. ...++|..++++||+||++++|+|
T Consensus 156 ~g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psa---s~~~~--gk~~~~~~l~~~rA~e~~~~vv~a 220 (634)
T 3ilv_A 156 KDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSA---SHFAF--GKSAIRYDLVIGGSERFDCTYVYA 220 (634)
T ss_dssp TTEEEEECCTTC----------CGGGTCSEEEEEEC---CBCCT--THHHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCEEEEEEEeccccCChHHHHHHHHCCCcEEEEecC---Ccccc--CcHHHHHHHHHHHHHHhCCEEEEE
Confidence 99999999999999998 999999999999999999 45532 346899999999999999999985
No 13
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=7.2e-41 Score=276.44 Aligned_cols=196 Identities=22% Similarity=0.271 Sum_probs=165.6
Q ss_pred cceEEEEEeccCC-----CCHHHHHHHHHHHHHHHHh--CCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHH
Q 027914 7 REVVVSALQFACT-----DDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (217)
Q Consensus 7 ~~~~ia~vQ~~~~-----~~~~~n~~~~~~~i~~a~~--~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (217)
++||||++|++++ +|.+.|++++.+++++|++ .|+|||||||++++||..... +....++.. .++.++.+
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~--~~~~~a~~~-~~~~~~~l 88 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW--LSEEFLLDV-PGKETELY 88 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTT--TSGGGCBCS-SSHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChh--HHHHhhccC-CCHHHHHH
Confidence 4699999999853 4789999999999999987 799999999999999864321 122333332 36789999
Q ss_pred HHHHHHcCcEEeeeeeeecC-Cc--eEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCceeEec-CCceEEE
Q 027914 80 QELAKELGVVMPVSFFEEAN-NA--HYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGV 155 (217)
Q Consensus 80 ~~~a~~~~i~i~~g~~~~~~-~~--~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~~~~~~-~~~~ig~ 155 (217)
+++|+++++++++|++++.+ ++ +||++++++++|+++..|+|+||+. |..+|.+|+...++|++ .+.|+|+
T Consensus 89 ~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~-----e~~~f~~G~~~~~v~~~~~g~~iG~ 163 (334)
T 2dyu_A 89 AKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN-----PIEPWYPGDLGMPVCEGPGGSKLAV 163 (334)
T ss_dssp HHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCCCCCSCCCCEECGGGCEEEE
T ss_pred HHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC-----CcccCcCCCCCceeEECCCCCEEEE
Confidence 99999999999999988753 44 9999999999999999999999753 44568999874458998 5669999
Q ss_pred EEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 156 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 156 ~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+||||++|||++|.++.+|+|+|++|++|+. ....+|..++++||+||+++||+|
T Consensus 164 ~ICyD~~fpe~~r~~~~~Gadlil~psaw~~-------~~~~~~~~~~~arA~En~~~vv~a 218 (334)
T 2dyu_A 164 CICHDGMIPELAREAAYKGCNVYIRISGYST-------QVNDQWILTNRSNAWHNLMYTVSV 218 (334)
T ss_dssp EEGGGGGCHHHHHHHHHTTCSEEEEEESSCT-------TSHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEECCCCchHHHHHHHHcCCCEEEEeCCCCC-------CcHHHHHHHHHHHHHhCCCEEEEE
Confidence 9999999999999999999999999999653 357899999999999999999975
No 14
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=2.5e-41 Score=288.94 Aligned_cols=201 Identities=21% Similarity=0.351 Sum_probs=170.0
Q ss_pred CcceEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHH
Q 027914 6 RREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (217)
Q Consensus 6 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (217)
+++||||++|+++.+|.+.|++++.+++++|+++|+|||||||+++++|..... ....+... .++..+.++++|++
T Consensus 12 ~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~---~~~~a~~~-~~~~~~~l~~~A~~ 87 (440)
T 1ems_A 12 TGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNE---QIDLAMAT-DCEYMEKYRELARK 87 (440)
T ss_dssp CSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHH---HHHHHHHH-HHHHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhH---HHHhhccC-CCHHHHHHHHHHHH
Confidence 457999999999988999999999999999999999999999999987754321 11111111 24678999999999
Q ss_pred cCcEEeeeeee---e-cCCceEEEEEEECCCCCeeeeeecccCCC-----CCCCcccccccCCCCCcee-EecCCceEEE
Q 027914 86 LGVVMPVSFFE---E-ANNAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKV-FQTKFAKIGV 155 (217)
Q Consensus 86 ~~i~i~~g~~~---~-~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~-----~~~~~e~~~~~~g~~~~~~-~~~~~~~ig~ 155 (217)
++++|++|++. + .++++|||+++++++|+++..|+|+||++ +..|.|..+|.+|+. +.+ |+++++|+|+
T Consensus 88 ~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~~~~~iG~ 166 (440)
T 1ems_A 88 HNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDTPIGRLGL 166 (440)
T ss_dssp TTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEETTEEECC
T ss_pred cCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEECCCeeEEE
Confidence 99999999654 3 35689999999999999999999999953 223568889999987 566 9999999999
Q ss_pred EEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 156 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 156 ~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
+||||++||++.+.++.+|+|+|++|++|+.. .+..+|..++++||+||++|||+|
T Consensus 167 ~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~------~~~~~~~~~~~arA~En~~~vv~a 222 (440)
T 1ems_A 167 SICYDVRFPELSLWNRKRGAQLLSFPSAFTLN------TGLAHWETLLRARAIENQCYVVAA 222 (440)
T ss_dssp CCGGGGGCHHHHHHHHHTTCSEEECCBCCCHH------HHHHHHHHHHHHHHHHHTCEEEEC
T ss_pred EEeccccChHHHHHHHHcCCcEEEECCcCCCC------CcHHHHHHHHHHHHHhcCcEEEEe
Confidence 99999999999999999999999999996521 246799999999999999999986
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=4.1e-38 Score=280.05 Aligned_cols=200 Identities=21% Similarity=0.220 Sum_probs=169.3
Q ss_pred CcceEEEEEeccC-CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchh--hHHhhcCCCCCChHHHHHHHH
Q 027914 6 RREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQRE--DFFQRAKPYKDHPTILKMQEL 82 (217)
Q Consensus 6 ~~~~~ia~vQ~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~ 82 (217)
...||||++|+++ .+|++.|++++.+.+++|+++|+|||||||++++||.+.++.. ++.+.+ .+.++.|.+.
T Consensus 10 ~g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~~-----~~~l~~l~~~ 84 (680)
T 3sdb_A 10 HGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV-----EDALLDLVTE 84 (680)
T ss_dssp GTEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHHH-----HHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHhh-----HHHHHHHHHH
Confidence 4579999999999 5999999999999999999999999999999999999877532 222221 3678899999
Q ss_pred HHHcCcEEeeeeeeecCCceEEEEEEECCCCCeeeeeecccCCCCCCCcccccccCCCCCc---------------eeE-
Q 027914 83 AKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF---------------KVF- 146 (217)
Q Consensus 83 a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y~K~~L~~~~~~~e~~~~~~g~~~~---------------~~~- 146 (217)
+++++++|++|++++.++++||++++++ +|++++.|+|+||++++.|.|.++|++|+... .+|
T Consensus 85 a~~~~i~ivvG~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~ 163 (680)
T 3sdb_A 85 SADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFA 163 (680)
T ss_dssp HTTCSSEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEE
T ss_pred hhcCCcEEEEeceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEe
Confidence 9999999999999998999999999998 99999999999999999999999999998731 145
Q ss_pred --ecCCceEEEEEecCCcchHHH-HHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhcccc-EEEEe
Q 027914 147 --QTKFAKIGVAICWDQWFPEAA-RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANV-VSYTD 216 (217)
Q Consensus 147 --~~~~~~ig~~IC~d~~~p~~~-~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~-~~vv~ 216 (217)
+++++|||+.||||+|||+.. +.++.+|+|+|++|++|+ +.. ...+.|..+++.|+.+++ ++|++
T Consensus 164 ~~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp---~~~--gk~~~r~~l~~~~aar~~~~yV~a 232 (680)
T 3sdb_A 164 ASDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSP---ITI--GRAEDRRLLARSASARCLAAYVYA 232 (680)
T ss_dssp ETTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCC---CCT--THHHHHHHHHHHHHHHTTSEEEEE
T ss_pred eeccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCc---ccc--CcHHHHHHHHHHHHHHhCCcEEEE
Confidence 689999999999999999995 899999999999999954 322 234667788887877654 44443
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=87.34 E-value=2.8 Score=32.79 Aligned_cols=68 Identities=19% Similarity=0.306 Sum_probs=41.4
Q ss_pred HHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ecCCceEE-EEEEECC
Q 027914 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNAHYN-SIAIIDA 111 (217)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~~~~~N-s~~~i~~ 111 (217)
+....+|+|+++.|-.+..++ . ......++..|.+++++++..... .+++..|. ...+++|
T Consensus 175 r~l~~~Ga~li~~ps~~~~~~--~---------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p 237 (283)
T 3hkx_A 175 RAAAARGAQLVLVPTALAGDE--T---------------SVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVVGP 237 (283)
T ss_dssp HHHHHTTCSEEEEECCCBSCC--T---------------HHHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEECT
T ss_pred HHHHHCCCCEEEECCCCCCcc--c---------------HHHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEECC
Confidence 344567999999997643211 0 012244566788999999876432 22332222 3578899
Q ss_pred CCCeeee
Q 027914 112 DGSDLGL 118 (217)
Q Consensus 112 ~G~~~~~ 118 (217)
+|+++..
T Consensus 238 ~G~vl~~ 244 (283)
T 3hkx_A 238 AGQPLGE 244 (283)
T ss_dssp TSCEEEE
T ss_pred CCCEEEe
Confidence 9988743
No 17
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=81.46 E-value=6.6 Score=30.88 Aligned_cols=74 Identities=9% Similarity=0.088 Sum_probs=47.4
Q ss_pred ceEEEEEeccCC------CCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHH
Q 027914 8 EVVVSALQFACT------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQE 81 (217)
Q Consensus 8 ~~~ia~vQ~~~~------~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 81 (217)
.+++..+..... ...+...+.+.+.++.|.+-|++.|++|-. + .......+... .+.+..+.+
T Consensus 89 GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~---~~~~~~~~~~~------~~~l~~l~~ 157 (305)
T 3obe_A 89 GLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--P---RIENEDDAKVV------SEIFNRAGE 157 (305)
T ss_dssp TCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--C---CCSSHHHHHHH------HHHHHHHHH
T ss_pred CCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--C---CCCCHHHHHHH------HHHHHHHHH
Confidence 356666665441 224667888899999999999999999831 1 11111122221 145677888
Q ss_pred HHHHcCcEEee
Q 027914 82 LAKELGVVMPV 92 (217)
Q Consensus 82 ~a~~~~i~i~~ 92 (217)
.|+++|+.+.+
T Consensus 158 ~a~~~Gv~l~l 168 (305)
T 3obe_A 158 ITKKAGILWGY 168 (305)
T ss_dssp HHHTTTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 88899998865
No 18
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=80.03 E-value=5.5 Score=31.04 Aligned_cols=67 Identities=13% Similarity=0.023 Sum_probs=40.4
Q ss_pred HHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee-eecCCc-eEEEEEEECCC
Q 027914 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANNA-HYNSIAIIDAD 112 (217)
Q Consensus 35 ~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~~~~-~~Ns~~~i~~~ 112 (217)
....+|+|+|+.|-.+.. .. . ......++.-|.+++++++.... ..+++. ++=...+++|+
T Consensus 177 ~~~~~Gadli~~psa~~~----~~--~-----------~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~ 239 (281)
T 3p8k_A 177 YPARSGAKIAFYVAQWPM----SR--L-----------QHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPN 239 (281)
T ss_dssp HHHHTTCCEEEEEECCBG----GG--H-----------HHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEECTT
T ss_pred HHHHCCCCEEEECCCCCC----cc--H-----------HHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEECCC
Confidence 344679999999964321 10 0 11234456678899999987543 233332 22345788999
Q ss_pred CCeeee
Q 027914 113 GSDLGL 118 (217)
Q Consensus 113 G~~~~~ 118 (217)
|+++..
T Consensus 240 G~vl~~ 245 (281)
T 3p8k_A 240 GDLVGE 245 (281)
T ss_dssp SCEEEE
T ss_pred CCEEEe
Confidence 998754
No 19
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=79.79 E-value=5.9 Score=30.41 Aligned_cols=65 Identities=18% Similarity=-0.001 Sum_probs=40.4
Q ss_pred HHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ecCCc-eEEEEEEECC
Q 027914 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNA-HYNSIAIIDA 111 (217)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~~~-~~Ns~~~i~~ 111 (217)
+....+|+|+++.|-.+... .....++.-|.+++++++..... .+++. ++=...+++|
T Consensus 156 r~~~~~ga~li~~ps~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p 215 (262)
T 3ivz_A 156 RTLALKGADVIAHPANLVMP--------------------YAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIASP 215 (262)
T ss_dssp HHHHHTTCSEEEEEECCCSS--------------------CHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEECT
T ss_pred HHHHHCCCCEEEEcCCCCch--------------------HHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEECC
Confidence 33456799999999764321 12245667788899998775432 22221 2223578889
Q ss_pred CCCeeee
Q 027914 112 DGSDLGL 118 (217)
Q Consensus 112 ~G~~~~~ 118 (217)
+|+++..
T Consensus 216 ~G~il~~ 222 (262)
T 3ivz_A 216 KAEVLSM 222 (262)
T ss_dssp TSCEEEE
T ss_pred CCCEeec
Confidence 9988744
No 20
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=78.10 E-value=18 Score=27.52 Aligned_cols=62 Identities=6% Similarity=-0.068 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc-hhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
.++.++.+.+.++.|.+-|++.|++.-. . +... ..+..+.. .+.++.+.+.|+++++.+.+=
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~----~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMSG-I----TEGLDRKACEETF-----IENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCBC-B----CTTSCHHHHHHHH-----HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccC-C----CCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEEe
Confidence 5677888999999999999998887422 1 1111 11111111 245677788888899987663
No 21
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=75.45 E-value=11 Score=30.19 Aligned_cols=68 Identities=19% Similarity=0.058 Sum_probs=40.9
Q ss_pred HHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ecC-CceEEEEEEECC
Q 027914 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN-NAHYNSIAIIDA 111 (217)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~-~~~~Ns~~~i~~ 111 (217)
+....+|+|+|+.|-.+.. . . . ......++..|.+++++++..... .++ ..++=...+++|
T Consensus 176 r~~~~~Gadlil~psaw~~--~-~---~-----------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Iidp 238 (334)
T 2dyu_A 176 REAAYKGCNVYIRISGYST--Q-V---N-----------DQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNF 238 (334)
T ss_dssp HHHHHTTCSEEEEEESSCT--T-S---H-----------HHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEECT
T ss_pred HHHHHcCCCEEEEeCCCCC--C-c---H-----------HHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEECC
Confidence 3344579999999975321 1 0 0 122345667788899998775432 222 223335567899
Q ss_pred CCCeeee
Q 027914 112 DGSDLGL 118 (217)
Q Consensus 112 ~G~~~~~ 118 (217)
+|+++..
T Consensus 239 ~G~vla~ 245 (334)
T 2dyu_A 239 DGTTLVQ 245 (334)
T ss_dssp TSCEEEE
T ss_pred CCCEeee
Confidence 9998753
No 22
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=74.99 E-value=6.7 Score=34.09 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=44.7
Q ss_pred HHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee-eecCC-ceEEEEEEECCC
Q 027914 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAIIDAD 112 (217)
Q Consensus 35 ~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~~~-~~~Ns~~~i~~~ 112 (217)
.++.+|+++++.|-.+. +..+.. ......++..|.+++++++.... ..+++ .++-..++++|+
T Consensus 180 ~la~~GA~ii~~psAs~--~~~gk~-------------~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~iidp~ 244 (565)
T 4f4h_A 180 LAKAAGAQVLIVPNGSP--YHMNKD-------------AVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLDGA 244 (565)
T ss_dssp HHHHTTCSEEEEEECCB--CCTTHH-------------HHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEECTT
T ss_pred HHHhCCCeeeecccccc--cccCcH-------------HHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCcceecCC
Confidence 34567999999997542 221110 11235678888999999877543 23333 455667899999
Q ss_pred CCeeee
Q 027914 113 GSDLGL 118 (217)
Q Consensus 113 G~~~~~ 118 (217)
|+++..
T Consensus 245 G~vla~ 250 (565)
T 4f4h_A 245 GELVAK 250 (565)
T ss_dssp SCEEEE
T ss_pred CcEEEE
Confidence 998754
No 23
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=73.97 E-value=25 Score=26.27 Aligned_cols=62 Identities=10% Similarity=-0.044 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc-hhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
.+..++.+.+.++.|.+-|++.|++. +|..+... ..+..+.. .+.+..+.+.|+++++.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF-----IDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH-----HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 46778899999999999999999874 23222211 11111111 24567777888888998766
No 24
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=73.83 E-value=10 Score=30.43 Aligned_cols=68 Identities=24% Similarity=0.248 Sum_probs=41.3
Q ss_pred HHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ecCCc-eEEEEEEECC
Q 027914 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNA-HYNSIAIIDA 111 (217)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~~~-~~Ns~~~i~~ 111 (217)
+.+..+|+|+|+.|-.+. +. . . ......++.-|.+++++++..... .+++. ++=...+++|
T Consensus 176 r~l~~~Gadlll~psa~~--~~--~--~-----------~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Iidp 238 (341)
T 2uxy_A 176 RDCAMKGAELIVRCQGYM--YP--A--K-----------DQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAIIGF 238 (341)
T ss_dssp HHHHHTTCSEEEEEECCB--TT--C--H-----------HHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEECT
T ss_pred HHHHHcCCCEEEEcCCCC--CC--c--H-----------HHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEECC
Confidence 334457999999996531 11 0 0 123355677788999998875432 22222 2224568899
Q ss_pred CCCeeee
Q 027914 112 DGSDLGL 118 (217)
Q Consensus 112 ~G~~~~~ 118 (217)
+|+++..
T Consensus 239 ~G~vla~ 245 (341)
T 2uxy_A 239 DGRTLGE 245 (341)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 9998753
No 25
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=73.43 E-value=11 Score=28.98 Aligned_cols=61 Identities=10% Similarity=0.064 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
.+..++.+.+.++.|.+-|++.|++.- |+.+.. ..+..+.. .+.+..+.+.|+++++.+.+
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~----G~~~~~-~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHI----GFVPES-SSPDYSEL-----VRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECC----CCCCCT-TSHHHHHH-----HHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC----CCCccc-chHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 567788999999999999999988742 332222 11111111 13567788888899998876
No 26
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=71.37 E-value=7.4 Score=30.29 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=38.7
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeee-c--CCceEEEEEEECCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-A--NNAHYNSIAIIDAD 112 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~--~~~~~Ns~~~i~~~ 112 (217)
...+|+|+|+.|-.+.. ..+ . ......++.-|.+++++++.....- . +..++=...+++|+
T Consensus 181 l~~~Ga~ll~~ps~~~~--~~~---~-----------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~ 244 (291)
T 1f89_A 181 SARKGAFAMIYPSAFNT--VTG---P-----------LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPR 244 (291)
T ss_dssp HHHTTEEEEEEECCCBT--THH---H-----------HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTT
T ss_pred HHhhCCCEEEECCcCCC--CCc---H-----------HHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCC
Confidence 34579999999953211 000 0 0123456667888999987764322 1 11233345788999
Q ss_pred CCeee
Q 027914 113 GSDLG 117 (217)
Q Consensus 113 G~~~~ 117 (217)
|+++.
T Consensus 245 G~vl~ 249 (291)
T 1f89_A 245 GKIVA 249 (291)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 98764
No 27
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=71.02 E-value=15 Score=28.08 Aligned_cols=61 Identities=13% Similarity=-0.058 Sum_probs=38.0
Q ss_pred CCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee-eecCC--ceEEEEEEECCCCCee
Q 027914 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN--AHYNSIAIIDADGSDL 116 (217)
Q Consensus 40 ~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~~~--~~~Ns~~~i~~~G~~~ 116 (217)
|+|+++.|-.+... . . ......++..|.+++++++.... ..+++ ..+=...+++|+|+++
T Consensus 165 ga~~i~~~s~w~~~----~--~-----------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~ 227 (266)
T 2e11_A 165 DFDLQLFVANWPSA----R--A-----------YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQ 227 (266)
T ss_dssp SCSEEEEEECCCGG----G--H-----------HHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCC----c--h-----------HHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCcee
Confidence 89999998763211 0 0 01234566778899999987643 22222 2333567889999886
Q ss_pred e
Q 027914 117 G 117 (217)
Q Consensus 117 ~ 117 (217)
.
T Consensus 228 ~ 228 (266)
T 2e11_A 228 V 228 (266)
T ss_dssp E
T ss_pred e
Confidence 4
No 28
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=70.18 E-value=22 Score=30.94 Aligned_cols=70 Identities=19% Similarity=0.263 Sum_probs=43.9
Q ss_pred HHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee-eecCCceEE-EEEEECC
Q 027914 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANNAHYN-SIAIIDA 111 (217)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~~~~~~N-s~~~i~~ 111 (217)
.....+|+|+++.|-.+. +..+. .......++..|.+++++++.... ...++..|. ..++++|
T Consensus 174 ~~la~~Ga~ii~~psa~p--~~~gk-------------~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iidp 238 (590)
T 3n05_A 174 PAARSAGAGLLLSVNASP--YERDK-------------DDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR 238 (590)
T ss_dssp HHHHHTTCSEEEEEECCB--CCCCS-------------SCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEECT
T ss_pred HHHHHcCCCEEEEecCCc--cccCc-------------HHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEECC
Confidence 344567999999996532 22211 122356678889999999987543 223333333 4568899
Q ss_pred CCCeeee
Q 027914 112 DGSDLGL 118 (217)
Q Consensus 112 ~G~~~~~ 118 (217)
+|+++..
T Consensus 239 ~G~vla~ 245 (590)
T 3n05_A 239 DGEVVAR 245 (590)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998754
No 29
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=69.53 E-value=16 Score=28.09 Aligned_cols=62 Identities=16% Similarity=0.290 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
+..++.+.+.++.|.+-|++.|+++=. ..+. .....+..+.. .+.+..+.+.|+++++.+.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~~~-~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 165 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGY--DVYY-QEANNETRRRF-----RDGLKESVEMASRAQVTLAM 165 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCC--SCSS-SCCCHHHHHHH-----HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--CCCc-CcCHHHHHHHH-----HHHHHHHHHHHHHhCCEEEE
Confidence 456788889999999999999999721 1111 11111111111 13567778888889998766
No 30
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=66.65 E-value=21 Score=27.36 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCcc-chhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+..++.+.+.++.|.+-|++.|+++-.... +.... ...+..+.. .+.+..+.+.++++++.+.+=
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFL-----CEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHH-----HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEEE
Confidence 567788899999999999998887532111 11000 111122211 245677888888999887663
No 31
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=65.01 E-value=12 Score=28.83 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=38.7
Q ss_pred HHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ecC--CceEEEEEEECC
Q 027914 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN--NAHYNSIAIIDA 111 (217)
Q Consensus 35 ~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~--~~~~Ns~~~i~~ 111 (217)
....+|+|+++.|-.+.. ..+ . ......++..|.+++++++..... .++ ..++=...+++|
T Consensus 164 ~~~~~ga~ll~~ps~~~~--~~~--~------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p 227 (276)
T 2w1v_A 164 IYAQRGCQLLVYPGAFNL--TTG--P------------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDP 227 (276)
T ss_dssp HHHHTTEEEEEEECCCCT--THH--H------------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECT
T ss_pred HHHHcCCCEEEECCcCCC--cCC--H------------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECC
Confidence 334579999999963211 000 0 012344566778899998876432 221 122224568889
Q ss_pred CCCeee
Q 027914 112 DGSDLG 117 (217)
Q Consensus 112 ~G~~~~ 117 (217)
+|+++.
T Consensus 228 ~G~v~~ 233 (276)
T 2w1v_A 228 WGQVLT 233 (276)
T ss_dssp TSCEEE
T ss_pred CCCEeE
Confidence 998764
No 32
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=64.36 E-value=44 Score=25.96 Aligned_cols=59 Identities=5% Similarity=0.018 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcE--Eee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~--i~~ 92 (217)
++..+.+.+.++.|.+-|++.|++|-. + .......+... .+.+..+.+.|+++|+. +.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~---~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQPMM--P---TITTHDEAKLV------CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSC--C---CCCSHHHHHHH------HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--C---CCCCHHHHHHH------HHHHHHHHHHHHHCCCcceEEE
Confidence 667888999999999999999999732 1 11111112221 24567788889999998 654
No 33
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=63.69 E-value=37 Score=26.27 Aligned_cols=66 Identities=14% Similarity=0.038 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCcc--chhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA--QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+..++.+.+.++.|.+-|++.|+.|=.+..|..... ...+..+.. .+.+..+.+.|+++++.+.+=
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG-----VEGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH-----HHHHHHHHHHHHHcCCEEEEe
Confidence 566788999999999999999986532111222111 111111111 245677788888999987663
No 34
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=62.45 E-value=32 Score=26.14 Aligned_cols=76 Identities=14% Similarity=0.001 Sum_probs=46.5
Q ss_pred ceEEEEEeccC----CCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCcc-chhhHHhhcCCCCCChHHHHHHHH
Q 027914 8 EVVVSALQFAC----TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPTILKMQEL 82 (217)
Q Consensus 8 ~~~ia~vQ~~~----~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 82 (217)
.+++..+.... +++.++.++.+.+.++.|.+-|++.|++.- |..... ...+..+.. .+.+..+.+.
T Consensus 61 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~----g~~~~~~~~~~~~~~~-----~~~l~~l~~~ 131 (286)
T 3dx5_A 61 TLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFA----GQKGSADFSQQERQEY-----VNRIRMICEL 131 (286)
T ss_dssp TCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECS----CSSCGGGSCHHHHHHH-----HHHHHHHHHH
T ss_pred CCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcC----CCCCcccCcHHHHHHH-----HHHHHHHHHH
Confidence 35566654332 345678889999999999999999886521 221111 111111111 1456778888
Q ss_pred HHHcCcEEee
Q 027914 83 AKELGVVMPV 92 (217)
Q Consensus 83 a~~~~i~i~~ 92 (217)
|+++++.+.+
T Consensus 132 a~~~Gv~l~l 141 (286)
T 3dx5_A 132 FAQHNMYVLL 141 (286)
T ss_dssp HHHTTCEEEE
T ss_pred HHHhCCEEEE
Confidence 8899998766
No 35
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=62.43 E-value=20 Score=27.01 Aligned_cols=65 Identities=14% Similarity=0.056 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
.+..++.+.+.++.|.+-|++.|+++=...+.. ..+ ..+..+.. .+.++.+.+.|+++++.+.+=
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~-~~~~~~~~-----~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKN-IDAARRMV-----VEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCC-HHHHHHHH-----HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcC-HHHHHHHH-----HHHHHHHHHHHHHcCCEEEEe
Confidence 355678889999999999999888763222110 001 11111111 245677888888899887664
No 36
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=62.37 E-value=20 Score=29.70 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=40.6
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEe--ccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~--~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
++++|-|. .+++.+++...|+|+|+. |--| .|-.. -....|..-...++++|++.+.++
T Consensus 66 ~Vl~alD~-t~~Vv~eAi~~gadlIItHHPlif--~~lk~--i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDV-TEEVVDEAIQLGANVIIAHHPLIF--NPLKA--IHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSC-CHHHHHHHHHHTCCEEEESSCSCC--SCCSC--CCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCcccc--CCccc--cCcCcHHHHHHHHHHHCCCeEEEe
Confidence 67899998 578888888999999997 4443 12211 123445555567889999988653
No 37
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=62.26 E-value=25 Score=27.16 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=37.9
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEe--ccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~--~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
.+++|-|.. +++.+++...|+|+|++ |..|. |-.. .....+..-...++++|++.+.++
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~--~~~~--~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFR--PIKD--LLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCS--CCCC--CCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccC--Cccc--cccCchHHHHHHHHHHCCCeEEEe
Confidence 578898984 67778888899999997 44331 2111 112333444456788899888653
No 38
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=62.14 E-value=7.8 Score=28.73 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=23.2
Q ss_pred eEEEEEeccCC----CCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 9 VVVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 9 ~~ia~vQ~~~~----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
+++-++..|+. .+.....+.+.+.|+ +.++|+|+|.|.
T Consensus 12 ~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 53 (256)
T 4fva_A 12 FEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 53 (256)
T ss_dssp CEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEec
Confidence 44444445552 234555555555554 458999999996
No 39
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=61.03 E-value=19 Score=26.06 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=25.4
Q ss_pred cceEEEEEeccC--CCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 7 ~~~~ia~vQ~~~--~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
.+|||...-..- ..+.....+.+.+.|+ +.++|+|+|.|.
T Consensus 2 ~~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 43 (250)
T 4f1h_A 2 SKLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQEL 43 (250)
T ss_dssp CCEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeC
Confidence 357776655432 2244555666666664 458999999995
No 40
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=59.97 E-value=24 Score=26.60 Aligned_cols=61 Identities=10% Similarity=0.209 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc-hhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
+..++.+.+.++.|.+-|++.|++. +|+..... ..+..+.. .+.+..+.+.|+++++.+.+
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 141 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS-----VDVLTELSDIAEPYGVKIAL 141 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH-----HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH-----HHHHHHHHHHHHhcCCEEEE
Confidence 4567888899999999999988873 22222111 11111111 13456777788888988766
No 41
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=57.12 E-value=24 Score=26.96 Aligned_cols=57 Identities=12% Similarity=-0.029 Sum_probs=36.5
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEe--ccCC-CCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAI-GSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~--~~~~-~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
.+++|-|. .+++.+++...|+|+|++ |..| ... .....+..-...++++|++.+.++
T Consensus 37 ~I~~~lD~-t~~vi~eAi~~~adlIitHHP~~f~~~~------~~i~~~~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTA-SQALLDEAVRLGADAVIVHHGYFWKGES------PVIRGMKRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEEC-CHHHHHHHHHTTCSEEEEEECSCCTTSC------CCCCTHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHhCCCCEEEECCchhccCCC------ccccchHHHHHHHHHHCCCEEEEe
Confidence 56788887 456777888899999996 5544 211 111122233346788899888653
No 42
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=57.11 E-value=21 Score=26.66 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=26.5
Q ss_pred cceEEEEEeccC--CCCHHHHHHHHHHHHHHHHhCCCcEEEecCccc
Q 027914 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (217)
Q Consensus 7 ~~~~ia~vQ~~~--~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (217)
++|||+.....- ..+....++++.+.|+ +.++|+|+|.|.-.
T Consensus 2 ~~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~---~~~~DIi~LQEv~~ 45 (266)
T 3teb_A 2 NAMKILTVNVHAWLEENQMEKIDILARTIA---EKQYDVIAMQEVNQ 45 (266)
T ss_dssp -CEEEEEEECCTTCSTTHHHHHHHHHHHHH---HHTCSEEEEEEEEE
T ss_pred CceEEEEEecccccCcchhHHHHHHHHHHH---hcCCCEEEEEEccc
Confidence 457776654432 2344556666666665 45899999999743
No 43
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=56.63 E-value=54 Score=25.71 Aligned_cols=65 Identities=17% Similarity=0.157 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccc-------------hhhHHhhcCCCCCChHHHHHHHHHHHcCcE
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-------------REDFFQRAKPYKDHPTILKMQELAKELGVV 89 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (217)
+..++.+.+.++.|.+-|++.|+.|=.+..|...+.. ..+..+.. .+.+..+.+.|+++|+.
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~ 179 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANA-----QPILDKLGEYAEIKKVK 179 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHH-----HHHHHHHHHHHHHcCCE
Confidence 4567888999999999999999765322112211110 11111111 13467777888889998
Q ss_pred Eee
Q 027914 90 MPV 92 (217)
Q Consensus 90 i~~ 92 (217)
+.+
T Consensus 180 l~l 182 (335)
T 2qw5_A 180 LAI 182 (335)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 44
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=56.00 E-value=50 Score=25.15 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCc--ccCcccCc------cc-hhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQEL--FEGYYFCQ------AQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~--~~~g~~~~------~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
.+..++.+.+.++.|.+-|++.|+++.. +..|.... .. ..+..+.+ .+.+..+.+.|+++++.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV-----CKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 3456788889999999999999888752 11122111 00 11111111 14567778888899998766
No 45
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=55.55 E-value=28 Score=26.04 Aligned_cols=64 Identities=13% Similarity=-0.041 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
+..++.+.+.++.|.+-|++.|++.-....+..+.. ..+..+.. .+.+..+.+.|+++++.+.+
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~-~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEE-ALERALPL-----AEALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHH-HHHTHHHH-----HHHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccc-HHHHHHHH-----HHHHHHHHHHHhhcCCEEEE
Confidence 556788899999999999998877532222110000 11111111 13446677778888988765
No 46
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=54.80 E-value=19 Score=29.85 Aligned_cols=67 Identities=10% Similarity=0.015 Sum_probs=39.6
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee-ec-CCceE-EEEEEECCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EA-NNAHY-NSIAIIDAD 112 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~-~~~~~-Ns~~~i~~~ 112 (217)
...+|+|+++.|-.+.. ..+ . ......++.-|.+++++++..... .+ ++..| =...+++|+
T Consensus 181 l~~~Ga~il~~psa~~~--~~~---~-----------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~ 244 (440)
T 1ems_A 181 NRKRGAQLLSFPSAFTL--NTG---L-----------AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPW 244 (440)
T ss_dssp HHHTTCSEEECCBCCCH--HHH---H-----------HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTT
T ss_pred HHHcCCcEEEECCcCCC--CCc---H-----------HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCC
Confidence 34579999999964311 000 0 012344566788999999875432 22 21222 245788999
Q ss_pred CCeeee
Q 027914 113 GSDLGL 118 (217)
Q Consensus 113 G~~~~~ 118 (217)
|+++..
T Consensus 245 G~vla~ 250 (440)
T 1ems_A 245 GAVVAQ 250 (440)
T ss_dssp SCEEEE
T ss_pred CCeecc
Confidence 988764
No 47
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=54.39 E-value=11 Score=28.51 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecCCceEEEEEEECCCCCeeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~ 118 (217)
.+.+.+.++.++.+.+|++.....+--.+.+..+++ .+|+++..
T Consensus 183 ~i~~~l~~l~~~~g~tvi~vtHd~~~~~~~d~i~~l-~~G~i~~~ 226 (235)
T 3tif_A 183 KIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYL-KDGEVERE 226 (235)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSCHHHHTTSSEEEEE-ETTEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCHHHHHhCCEEEEE-ECCEEEEE
Confidence 456778888777677776654332212355667777 48877544
No 48
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=53.60 E-value=26 Score=26.68 Aligned_cols=57 Identities=7% Similarity=-0.124 Sum_probs=37.3
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEe--ccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~--~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
.+++|-|.. +++.+++...|+|+|++ |..| +-. .....+..-...++++|++.+.++
T Consensus 38 ~I~~alD~t-~~vi~eAi~~~adlIitHHp~~f---~~~---~~~~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 38 KVGAAVDAG-EAIFRKALEEEVDFLIVHHGLFW---GKP---FPIVGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp CEEEEEECS-HHHHHHHHHTTCSEEEEEECSCS---SCC---CCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcCc---Ccc---cccccHHHHHHHHHHHCCCeEEEe
Confidence 467788874 67778888899999997 4443 111 112334444456788999888653
No 49
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=53.28 E-value=61 Score=26.10 Aligned_cols=69 Identities=4% Similarity=-0.027 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee
Q 027914 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~ 95 (217)
.++..+.++.+++.|++-||+-....-|+....-.... .........+.++.+.+.|+++|+.+.+|..
T Consensus 53 ~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~-~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 53 EKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLL-KKGCYMPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHH-HTTCCCCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCccccc-ccCccCCcccHHHHHHHHHHHhCCeEEEecC
Confidence 45555667777788999999876554444322111111 1111112357899999999999999988854
No 50
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=52.30 E-value=26 Score=28.60 Aligned_cols=58 Identities=10% Similarity=0.110 Sum_probs=38.3
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEe--ccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~--~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
++++|-|. .+++.+++...|+|+|+. |--| .|-.. .....| .-...++++|++.+.++
T Consensus 42 ~Vl~alD~-t~~Vv~eAi~~~adlIItHHPlif--~~~k~--i~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDC-TLEVVNEAIEKGYNTIISHHPLIF--KGVTS--LKANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSC-CHHHHHHHHHHTCCEEEESSCSSC--SCCSC--CCSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCCccc--CCccc--cCcCCH-HHHHHHHHHCCCeEEEe
Confidence 57889998 578888888999999997 4443 22211 112333 34447888999988653
No 51
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=50.57 E-value=48 Score=25.60 Aligned_cols=41 Identities=17% Similarity=0.089 Sum_probs=26.0
Q ss_pred HHHHHHHHcCcEEeeeee-eecCC-ceEEEEEEECCCCCeeee
Q 027914 78 KMQELAKELGVVMPVSFF-EEANN-AHYNSIAIIDADGSDLGL 118 (217)
Q Consensus 78 ~l~~~a~~~~i~i~~g~~-~~~~~-~~~Ns~~~i~~~G~~~~~ 118 (217)
.++.-|.+++++++.... ..+++ .++=...+++|+|+++..
T Consensus 218 ~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~ 260 (303)
T 1uf5_A 218 SMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVAL 260 (303)
T ss_dssp HHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEEE
T ss_pred HHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEecc
Confidence 456678889999987543 22222 222235688999988753
No 52
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=50.27 E-value=56 Score=26.76 Aligned_cols=40 Identities=5% Similarity=0.129 Sum_probs=30.0
Q ss_pred ceEEEEEeccC--------CCCHHHHHHHHHHHHHHHHhCCCcEEEec
Q 027914 8 EVVVSALQFAC--------TDDVSTNLATAERLVRAAHGKGANIILIQ 47 (217)
Q Consensus 8 ~~~ia~vQ~~~--------~~~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (217)
-+++..++... ..+.++.++.+++.++.|++.|+++|+..
T Consensus 77 GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~n 124 (386)
T 3bdk_A 77 GLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYN 124 (386)
T ss_dssp TCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 36676664311 23568889999999999999999999863
No 53
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=50.24 E-value=78 Score=24.79 Aligned_cols=66 Identities=17% Similarity=0.224 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
..|++.+.+.++.+.+.|.+++=+.--.++-|......-+.... ..+..+.+.+.++++++.+.+-
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~-----~~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGA-----YEEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHH-----HHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCC-----CHHHHHHHHHHHHHcCCeEEEe
Confidence 78999999999999999998887754444433221110001000 0134678899999999877654
No 54
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=50.21 E-value=22 Score=29.32 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=26.0
Q ss_pred HhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeee
Q 027914 37 HGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF 94 (217)
Q Consensus 37 ~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~ 94 (217)
..+|+|+|+.|-.+.... . . ......++.-|.+++++++...
T Consensus 247 a~~GAdill~psa~~~~~--~---~-----------~~w~~l~raRAiEn~~~Vv~aN 288 (405)
T 2vhh_A 247 GLNGAEIVFNPSATIGRL--S---E-----------PLWSIEARNAAIANSYFTVPIN 288 (405)
T ss_dssp HHTTCSEEEEEECCBCTT--T---H-----------HHHHHHHHHHHHHHTSEEEEEE
T ss_pred HHcCCCEEEEcccCCCCC--C---H-----------HHHHHHHHHHHHHcCceEEEec
Confidence 457999999998542110 0 0 0122345667788999997754
No 55
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=49.10 E-value=45 Score=27.43 Aligned_cols=72 Identities=18% Similarity=0.156 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEec----CcccCccc--Cc------cchhhHHhhcCCCCCChHHHHHHHHHHHcCcEE
Q 027914 23 STNLATAERLVRAAHGKGANIILIQ----ELFEGYYF--CQ------AQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~P----E~~~~g~~--~~------~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i 90 (217)
..++++..++++.|++.|||.|=|. +..++.+. .. ....+..+.+. ...+....|.+.+++.|+.+
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~--l~~e~~~~L~~~~~~~Gi~~ 117 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSME--MPAEWILPLLDYCREKQVIF 117 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBS--SCGGGHHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcC--CCHHHHHHHHHHHHHcCCcE
Confidence 4458888999999999999999884 44334432 00 00112233222 23577899999999999998
Q ss_pred eeeeee
Q 027914 91 PVSFFE 96 (217)
Q Consensus 91 ~~g~~~ 96 (217)
+..-.+
T Consensus 118 ~stpfD 123 (385)
T 1vli_A 118 LSTVCD 123 (385)
T ss_dssp ECBCCS
T ss_pred EEccCC
Confidence 776543
No 56
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=48.54 E-value=51 Score=23.35 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEE
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i 90 (217)
.++-.+.+.++++.+.+.++.++++--...+ ......+.... ..+.+.++++|+++++.+
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~----~~~~~~~~~~~-----~~~n~~~~~~a~~~~~~~ 171 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLE----PNRSDPMRKTV-----DAYIEAMRDVAASEHVPF 171 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCC----CCTTSHHHHHH-----HHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCC----CCcchHHHHHH-----HHHHHHHHHHHHHcCCeE
Confidence 4455666677777777779999988311111 11000011111 245678888999988654
No 57
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=48.00 E-value=26 Score=26.40 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=22.4
Q ss_pred CcceEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 6 RREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 6 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
+..||| +|.|+.+- ....+++.+.+ .+.++|+|++.|.
T Consensus 5 ~~~mki--~s~Nvn~~-r~~~~~l~~~l---~~~~~DIl~LQEt 42 (240)
T 2ei9_A 5 RPRLRI--GQINLGGA-EDATRELPSIA---RDLGLDIVLVQEQ 42 (240)
T ss_dssp -CEEEE--EEEECTTC-HHHHHTHHHHH---HHHTCSEEEEESC
T ss_pred cccceE--EEEecCcc-HHHHHHHHHHH---HHcCCCEEEeecc
Confidence 334555 55666432 33344444444 4569999999996
No 58
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=47.91 E-value=70 Score=24.27 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCccc---C-ccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF---C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~---~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+..++.+.+.++.|.+-|++.|+.+=. +++. . .....+..+.. .+.+..+.+.++++++.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALY--SYWPIDYTKTIDKKGDWERS-----VESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTT--SCSSCCTTSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeecccc--CCCCCcCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEEE
Confidence 456788889999999999999964211 1221 1 11111122221 245677888888999987663
No 59
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=47.73 E-value=19 Score=26.50 Aligned_cols=40 Identities=5% Similarity=0.076 Sum_probs=24.7
Q ss_pred cceEEEEEeccC--CCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 7 ~~~~ia~vQ~~~--~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
.+|||...-..- ..+..+..+.+.+.|+ +.++|+|+|.|.
T Consensus 8 ~~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 49 (256)
T 4gz1_A 8 STISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEV 49 (256)
T ss_dssp GEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CcEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 356666644432 1234555565666554 458999999995
No 60
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=47.72 E-value=45 Score=27.20 Aligned_cols=60 Identities=12% Similarity=-0.038 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccC--ccchhhHHhhcCCCCCChHHHHHHHHHHHcCcE
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFC--QAQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (217)
..|.+.+.+.++..++.|..++||||..=+--.+ +.+ ..........+.++.+|.+.++.
T Consensus 206 r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l-------~~~~Fk~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 206 KANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEW-------YPAPFDASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCB-------CCCCCCHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcc-------ccccccchhhhHHHHHHHHcCCC
Confidence 4566666666666666688999999974321100 100 00001234578888999988876
No 61
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=47.32 E-value=32 Score=26.75 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccC-cccCcc-chhhHHhhcCCCCCChHHHHHHHHHHHcCcE-Eee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEG-YYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVV-MPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~-i~~ 92 (217)
+..++.+.+.++.|.+-|++.|+.|=.+.+ +..... ...+..+.. .+.+..+.+.|+++++. +.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIA-----RDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHH-----HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHH-----HHHHHHHHHHHHhcCCeEEEE
Confidence 456788899999999999999997654321 111111 111111111 24567778888889988 654
No 62
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=46.17 E-value=33 Score=23.05 Aligned_cols=42 Identities=7% Similarity=-0.084 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEe
Q 027914 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (217)
.+...+.++++.+.|+.-|+|.. |+. -+.+.+.|+++++.++
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~----G~~--------------------~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNP----GTE--------------------NEELEEILSENGIEPV 109 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECT----TCC--------------------CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECC----CCC--------------------hHHHHHHHHHcCCeEE
Confidence 45556677777777888766643 221 1578899999999987
No 63
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=45.14 E-value=51 Score=22.84 Aligned_cols=69 Identities=7% Similarity=0.091 Sum_probs=39.1
Q ss_pred EEEEEeccCC-----CCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHH
Q 027914 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (217)
Q Consensus 10 ~ia~vQ~~~~-----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (217)
.+.++++... .+.++-.+.+.++++.+.+.++.+++.-= .++... + .+.. ..+.+.++++|+
T Consensus 68 d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~~-~---~~~~--------~~~~~~~~~~a~ 134 (185)
T 3hp4_A 68 THVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEI-YIPPNY-G---PRYS--------KMFTSSFTQISE 134 (185)
T ss_dssp SEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCSTT-C---HHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCcc-c---HHHH--------HHHHHHHHHHHH
Confidence 4556665542 13455566666677777777888877621 111100 0 0110 245688899999
Q ss_pred HcCcEEe
Q 027914 85 ELGVVMP 91 (217)
Q Consensus 85 ~~~i~i~ 91 (217)
++++.++
T Consensus 135 ~~~~~~v 141 (185)
T 3hp4_A 135 DTNAHLM 141 (185)
T ss_dssp HHCCEEE
T ss_pred HcCCEEE
Confidence 9888754
No 64
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=44.70 E-value=55 Score=24.57 Aligned_cols=62 Identities=11% Similarity=0.006 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
.++.++.+.+.++.|.+-|++.|+++= .++.. .. ..+..+.+ .+.+..+.+.|+++++.+.+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~--~p~~~-~~-~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 140 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAFL--WPSMD-EE-PVRYISQL-----ARRIRQVAVELLPLGMRVGL 140 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEEC--CSEES-SC-HHHHHHHH-----HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEee--cCCCC-Cc-chhhHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 345567788899999999999998531 11110 00 11111111 13466777788889998876
No 65
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=43.95 E-value=85 Score=22.49 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEe
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (217)
+.+...+.+...++.+.+.++.+++..=.-...+..........+.. ..+-+.++++|++.++..+
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i-----~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKI-----QSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHH-----HHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHH-----HHHHHHHHHHHHhcCCeEe
Confidence 34555666667777777789998875211110000000000000000 1345778889999887653
No 66
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=43.58 E-value=39 Score=25.64 Aligned_cols=66 Identities=14% Similarity=0.239 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcc---cCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYY---FCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+..++.+.+.++.|.+-|++.|+.|=....|. .......+..+.. .+.+..+.+.|+++++.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA-----IESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH-----HHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH-----HHHHHHHHHHHHHcCCEEEEE
Confidence 45678888999999999999998542111122 1111111111111 134566778888889987663
No 67
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=43.41 E-value=99 Score=22.99 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=41.6
Q ss_pred eEEEEEecc--CCCCHHHHHHHHHHHHHHHHhCCCcEEEe-cCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHH
Q 027914 9 VVVSALQFA--CTDDVSTNLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (217)
Q Consensus 9 ~~ia~vQ~~--~~~~~~~n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (217)
+++..++.. .....++..+.+.+.++.|.+-|++.|++ |- +..... +...+ .+.+..+.+.|++
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g-----~~~~~~---~~~~~-----~~~l~~l~~~a~~ 131 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLCPL-----NDGTIV---PPEVT-----VEAIKRLSDLFAR 131 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECCC-----CSSBCC---CHHHH-----HHHHHHHHHHHHT
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEccC-----CCchhH---HHHHH-----HHHHHHHHHHHHH
Confidence 566555532 22112456788889999999999998875 32 211110 11110 1345667778888
Q ss_pred cCcEEee
Q 027914 86 LGVVMPV 92 (217)
Q Consensus 86 ~~i~i~~ 92 (217)
+++.+.+
T Consensus 132 ~gv~l~~ 138 (272)
T 2q02_A 132 YDIQGLV 138 (272)
T ss_dssp TTCEEEE
T ss_pred cCCEEEE
Confidence 8988766
No 68
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=42.84 E-value=27 Score=25.89 Aligned_cols=39 Identities=23% Similarity=0.084 Sum_probs=23.9
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCccc
Q 027914 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (217)
Q Consensus 9 ~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (217)
+.+-+++.|+.... ...+.+.+.+ .+.++|+|++.|.-.
T Consensus 18 ~~lri~s~Nv~~~~-~~~~~l~~~i---~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 18 PPYRVLQANLQRKK-LATAELAIEA---ATRKAAIALIQEPYV 56 (245)
T ss_dssp CCEEEEEEECTTCH-HHHHHHHHHH---HHHTCSEEEEESCCC
T ss_pred cceeeeeeeccccH-HHHHHHHHHH---hhcCCCEEEEEcccc
Confidence 34556667775432 2334444444 456999999999754
No 69
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=42.33 E-value=39 Score=24.50 Aligned_cols=41 Identities=10% Similarity=0.163 Sum_probs=22.8
Q ss_pred cceEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCccc
Q 027914 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (217)
Q Consensus 7 ~~~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (217)
.+|||......-. ......+.+.+.++ +.++|+|++.|.-.
T Consensus 6 ~~lri~t~Nv~g~-~~~~~~~~~~~~i~---~~~~DIv~LQE~~~ 46 (238)
T 1vyb_A 6 SHITILTLNINGL-NSAIKRHRLASWIK---SQDPSVCCIQETHL 46 (238)
T ss_dssp CCEEEEEEECSCC-CSHHHHHHHHHHHH---HHCCSEEEEECCCC
T ss_pred CcceEEEEecccC-CchhhHHHHHHHHH---HcCCCEEEEecccC
Confidence 3566555444322 22222344555554 45899999999754
No 70
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=42.21 E-value=63 Score=25.14 Aligned_cols=65 Identities=14% Similarity=0.030 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCc-----ccCc--cchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGY-----YFCQ--AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g-----~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
++.++.+.+.++.|.+-|++.|+++=....+ +... ....+..+.+ .+.++.+.+.|+++++.+.+
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDF-----ADRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 4567888889999999999998875322110 0000 0011111111 13567777888889998766
No 71
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=39.34 E-value=1.4e+02 Score=23.69 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=28.4
Q ss_pred eEEEEEeccC--------CCCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 027914 9 VVVSALQFAC--------TDDVSTNLATAERLVRAAHGKGANIILI 46 (217)
Q Consensus 9 ~~ia~vQ~~~--------~~~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (217)
+++..++... ....++.++.+.+.++.|.+.|+++|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5666555333 1245777888999999999999999998
No 72
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=39.23 E-value=71 Score=25.63 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=23.1
Q ss_pred ceEEEEEeccCC--CCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 8 EVVVSALQFACT--DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 8 ~~~ia~vQ~~~~--~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
+|||.....+-. .+.....+.+.+.|+ +.++|||+|.|.
T Consensus 119 ~lkVlSWNI~Gl~~~~~~~R~~~I~~~I~---~~~PDIV~LQEv 159 (362)
T 4gew_A 119 EVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 159 (362)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 455555433221 234455555555554 458999999995
No 73
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=39.14 E-value=98 Score=21.79 Aligned_cols=26 Identities=15% Similarity=0.192 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEe
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILI 46 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (217)
.+...+..+.++.++-.+.++.+|.+
T Consensus 62 ~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 62 YTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp THHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45555666666665555556666655
No 74
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=39.10 E-value=98 Score=21.67 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (217)
.+...+..+.++.++-.++++.+|.++
T Consensus 63 ~C~~~~~~l~~l~~~~~~~~v~vv~is 89 (185)
T 2gs3_A 63 KTEVNYTQLVDLHARYAECGLRILAFP 89 (185)
T ss_dssp THHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred chHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 456666666666666555666766553
No 75
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=38.79 E-value=40 Score=29.60 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=39.6
Q ss_pred HHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee-eec-CCceEEEEEEECCC
Q 027914 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEA-NNAHYNSIAIIDAD 112 (217)
Q Consensus 35 ~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~-~~~~~Ns~~~i~~~ 112 (217)
..+.+|+|+|+.|-.+. +..+.. ......++..|.+++++++.... ..+ ++..|...-++.|+
T Consensus 177 ~la~~GAdii~~psas~--~~~gk~-------------~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~p~ 241 (634)
T 3ilv_A 177 RHYEKGATLVLNPSASH--FAFGKS-------------AIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIAHK 241 (634)
T ss_dssp -CGGGTCSEEEEEECCB--CCTTHH-------------HHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEEET
T ss_pred HHHHCCCcEEEEecCCc--cccCcH-------------HHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEEcC
Confidence 34467999999997542 221110 11235567788899999886543 222 23344333333489
Q ss_pred CCeeee
Q 027914 113 GSDLGL 118 (217)
Q Consensus 113 G~~~~~ 118 (217)
|+++..
T Consensus 242 G~vla~ 247 (634)
T 3ilv_A 242 GKLIQR 247 (634)
T ss_dssp TEEEEE
T ss_pred CeEEEE
Confidence 988754
No 76
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=38.24 E-value=99 Score=21.50 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=39.8
Q ss_pred EEEEEeccCCC-----CHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHH
Q 027914 10 VVSALQFACTD-----DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (217)
Q Consensus 10 ~ia~vQ~~~~~-----~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (217)
.+.++++..++ +.++-.+.+.++++.+.+.++++++.--. .+. ..+ .+.. ..+.+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~-~~~---~~~~--------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPA-NYG---RRYN--------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCG-GGC---HHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCc-chh---HHHH--------HHHHHHHHHHHH
Confidence 56677776632 45555666666777776778898876321 111 000 0110 245678889999
Q ss_pred HcCcEEe
Q 027914 85 ELGVVMP 91 (217)
Q Consensus 85 ~~~i~i~ 91 (217)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9887653
No 77
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=37.81 E-value=70 Score=24.49 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEecCcc
Q 027914 26 LATAERLVRAAHGKGANIILIQELF 50 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (217)
.+++.+.| .+.++|||+|.|..
T Consensus 32 ~~~i~~~i---~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 32 YPVIAQMV---QYHDFDIFGTQECF 53 (298)
T ss_dssp HHHHHHHH---HHTTCSEEEEESBC
T ss_pred HHHHHHHH---HHcCCCEEEEeCCC
Confidence 34444444 45699999999963
No 78
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=37.76 E-value=40 Score=26.73 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=18.4
Q ss_pred EEEEEEECCCCCeeeeeecccC
Q 027914 103 YNSIAIIDADGSDLGLYRKSHI 124 (217)
Q Consensus 103 ~Ns~~~i~~~G~~~~~y~K~~L 124 (217)
+-+.++||++|.+...|++...
T Consensus 102 ~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 102 VRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp CCEEEEECTTSBEEEEEESCCS
T ss_pred ccEEEEECCCCEEEEEEeCCCc
Confidence 4477999999999999998764
No 79
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=37.75 E-value=95 Score=22.82 Aligned_cols=19 Identities=16% Similarity=-0.025 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHcCcEEe
Q 027914 73 HPTILKMQELAKELGVVMP 91 (217)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~ 91 (217)
..+.+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 4788999999999998864
No 80
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=37.36 E-value=20 Score=26.74 Aligned_cols=41 Identities=10% Similarity=0.084 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecCCceEEEEEEECCCCCee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDL 116 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~ 116 (217)
...+.+.+++++ +.++++.....+.-.+.+..+++ .+|+++
T Consensus 178 ~~~~~l~~l~~~-g~tvi~vtHd~~~~~~~d~v~~l-~~G~i~ 218 (224)
T 2pcj_A 178 RVMDIFLKINEG-GTSIVMVTHERELAELTHRTLEM-KDGKVV 218 (224)
T ss_dssp HHHHHHHHHHHT-TCEEEEECSCHHHHTTSSEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCHHHHHhCCEEEEE-ECCEEE
Confidence 345667777666 66666554332211345566677 478654
No 81
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=36.74 E-value=46 Score=24.91 Aligned_cols=40 Identities=8% Similarity=0.140 Sum_probs=22.7
Q ss_pred ceEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccC
Q 027914 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEG 52 (217)
Q Consensus 8 ~~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~ 52 (217)
.|||.. .|+.+ ......+ ..++...+.++|+|++.|.-..
T Consensus 3 ~l~i~s--~Nv~g-~~~~~~~--~l~~~i~~~~~DIv~LQEt~~~ 42 (265)
T 3g91_A 3 VLKIIS--WNVNG-LRAVHRK--GFLKWFMEEKPDILCLQEIKAA 42 (265)
T ss_dssp EEEEEE--EECSC-HHHHHHH--THHHHHHHHCCSEEEEECCCSC
T ss_pred ccEEEE--EEcCC-chhhhhh--hHHHHHHhcCCCEEEEEecccc
Confidence 466655 45532 3333332 2334444569999999997543
No 82
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=36.56 E-value=55 Score=25.14 Aligned_cols=46 Identities=11% Similarity=-0.064 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 28 TAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 28 ~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
.+.+.+..+.+.|.|+++....++. +.++.+.|.+.|++.+..+.+
T Consensus 72 av~e~~~~iL~aG~dvv~~S~gaLa-------------------d~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 72 AVKEYSLQILKNPVNYIIISTSAFA-------------------DEVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp HHHHHHHHHTTSSSEEEECCGGGGG-------------------SHHHHHHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEcChhhhc-------------------CHHHHHHHHHHHHHCCCeEEe
Confidence 4555677778889999999876653 135668899999999877744
No 83
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=36.15 E-value=1.6e+02 Score=23.32 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
...|++.+.+.++.-.+.|..+.=++---+|.+.......++.+.+ .+.+..+.++|+++++-+.+
T Consensus 55 ~~~Nl~~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~~~~-----~~~l~~iG~~a~~~~iRLS~ 120 (310)
T 3tc3_A 55 SSSNLLCLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWKDKL-----SHILGDIGDFIKENSIRISM 120 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHHHHT-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEeCcccCCCccccccccchHHHH-----HHHHHHHHHHHHHcCcEEEe
Confidence 4679999999999999999998877665555443322211222221 35678899999999998866
No 84
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=35.07 E-value=53 Score=26.58 Aligned_cols=72 Identities=21% Similarity=0.233 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEec----CcccCccc--Cc-----cchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEe
Q 027914 23 STNLATAERLVRAAHGKGANIILIQ----ELFEGYYF--CQ-----AQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~P----E~~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (217)
.++++...+.++.|++.|+|.|=|. +..++.+. .. ....+..+... ...+....|.+.+++.|+.++
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~--l~~e~~~~L~~~~~~~Gi~~~ 108 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCA--LNEEDEIKLKEYVESKGMIFI 108 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHC--CCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhC--CCHHHHHHHHHHHHHhCCeEE
Confidence 4568888899999999999999885 33223322 10 00112222222 134678999999999999987
Q ss_pred eeeee
Q 027914 92 VSFFE 96 (217)
Q Consensus 92 ~g~~~ 96 (217)
....+
T Consensus 109 st~~d 113 (349)
T 2wqp_A 109 STLFS 113 (349)
T ss_dssp EEECS
T ss_pred EeeCC
Confidence 76543
No 85
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=34.09 E-value=50 Score=25.09 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=38.7
Q ss_pred HHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECC
Q 027914 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDA 111 (217)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~ 111 (217)
+..|...+++++++=|-.- +..+. ......+.+.+++++ +.+|++.....+. ..+.+..+++ .
T Consensus 164 iAraL~~~p~lllLDEPts-~LD~~-------------~~~~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l-~ 227 (257)
T 1g6h_A 164 IGRALMTNPKMIVMDEPIA-GVAPG-------------LAHDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVM-F 227 (257)
T ss_dssp HHHHHHTCCSEEEEESTTT-TCCHH-------------HHHHHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEE-E
T ss_pred HHHHHHcCCCEEEEeCCcc-CCCHH-------------HHHHHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEE-E
Confidence 3334556889999999321 11110 012455677777665 6676665443332 2455667777 4
Q ss_pred CCCeee
Q 027914 112 DGSDLG 117 (217)
Q Consensus 112 ~G~~~~ 117 (217)
+|+++.
T Consensus 228 ~G~i~~ 233 (257)
T 1g6h_A 228 NGQIIA 233 (257)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 787653
No 86
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=33.91 E-value=44 Score=26.97 Aligned_cols=67 Identities=19% Similarity=0.251 Sum_probs=38.5
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.- +.. +.....+.+.+.++.++.++++++.....+. ..+.+..+++ .+|+
T Consensus 154 aL~~~P~lLLLDEP~s-~LD-------------~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~~~~~~adri~vl-~~G~ 218 (353)
T 1oxx_K 154 ALVKDPSLLLLDEPFS-NLD-------------ARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVL-VKGK 218 (353)
T ss_dssp HHTTCCSEEEEESTTT-TSC-------------GGGHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEE-ETTE
T ss_pred HHHhCCCEEEEECCcc-cCC-------------HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE-ECCE
Confidence 3445788888888321 111 1111345677888888778877776544322 2344566677 4787
Q ss_pred eee
Q 027914 115 DLG 117 (217)
Q Consensus 115 ~~~ 117 (217)
++.
T Consensus 219 i~~ 221 (353)
T 1oxx_K 219 LVQ 221 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 87
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=33.02 E-value=26 Score=28.54 Aligned_cols=67 Identities=12% Similarity=0.209 Sum_probs=39.3
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.- +..+. ....+.+.+.++.++.+++|++-..+-.. ..+.+..+++ .+|+
T Consensus 177 AL~~~P~lLLlDEPTs-~LD~~-------------~~~~i~~lL~~l~~~~g~Tii~vTHdl~~~~~~aDrv~vl-~~G~ 241 (366)
T 3tui_C 177 ALASNPKVLLCDQATS-ALDPA-------------TTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVI-SNGE 241 (366)
T ss_dssp HTTTCCSEEEEESTTT-TSCHH-------------HHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEE-ETTE
T ss_pred HHhcCCCEEEEECCCc-cCCHH-------------HHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEE-ECCE
Confidence 3445788888888321 11110 01345678888888888888776543321 2345566777 4787
Q ss_pred eee
Q 027914 115 DLG 117 (217)
Q Consensus 115 ~~~ 117 (217)
++.
T Consensus 242 iv~ 244 (366)
T 3tui_C 242 LIE 244 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 88
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=33.00 E-value=1.6e+02 Score=23.75 Aligned_cols=64 Identities=13% Similarity=0.031 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCcccCcccC--ccchhhHHhhcCCCCCChHHHHHHHHHHHcC--cEEee
Q 027914 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFC--QAQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--i~i~~ 92 (217)
+..++.+.+.++.|.+-|++.|++.-.. .++.. .....+..+.. .+.+..+.+.|++++ +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~-----~e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRM-----REGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHH-----HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 5667889999999999999988763211 11110 11111111111 135677778888888 88765
No 89
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=33.00 E-value=1.2e+02 Score=21.01 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEe
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILI 46 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (217)
.+...+..+.++.++-.++++.+|.+
T Consensus 61 ~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 61 KTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp THHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45556666666666555556666655
No 90
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=31.80 E-value=65 Score=24.89 Aligned_cols=66 Identities=11% Similarity=0.082 Sum_probs=34.9
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEE--eeeeeee-cCCceEEEEEEECCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM--PVSFFEE-ANNAHYNSIAIIDAD 112 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i--~~g~~~~-~~~~~~Ns~~~i~~~ 112 (217)
|...+++++++=|-.- +..+. ....+.+.+.+++++ +.+| ++..... .-..+.+..+++ .+
T Consensus 175 aL~~~p~lLlLDEPts-~LD~~-------------~~~~l~~~l~~l~~~-g~tv~~iivtHd~~~~~~~~d~v~~l-~~ 238 (279)
T 2ihy_A 175 ALMGQPQVLILDEPAA-GLDFI-------------ARESLLSILDSLSDS-YPTLAMIYVTHFIEEITANFSKILLL-KD 238 (279)
T ss_dssp HHHTCCSEEEEESTTT-TCCHH-------------HHHHHHHHHHHHHHH-CTTCEEEEEESCGGGCCTTCCEEEEE-ET
T ss_pred HHhCCCCEEEEeCCcc-ccCHH-------------HHHHHHHHHHHHHHC-CCEEEEEEEecCHHHHHHhCCEEEEE-EC
Confidence 4445788888888321 11100 012345677777666 4444 4433322 223455677777 48
Q ss_pred CCeee
Q 027914 113 GSDLG 117 (217)
Q Consensus 113 G~~~~ 117 (217)
|+++.
T Consensus 239 G~i~~ 243 (279)
T 2ihy_A 239 GQSIQ 243 (279)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 87654
No 91
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=30.64 E-value=80 Score=26.75 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeee
Q 027914 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF 94 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~ 94 (217)
.+...+.++++.+.|+.+||+.|.+ . ......+.+.|+++++.+++..
T Consensus 46 a~~v~~~v~e~~~~Gv~~viis~Gf----~-----------------~~~~~~l~~~A~~~g~rliGPN 93 (480)
T 3dmy_A 46 GEYAAELANQALDRNLNVMMFSDNV----T-----------------LEDEIQLKTRAREKGLLVMGPD 93 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCC----C-----------------HHHHHHHHHHHHHTTCCEECSS
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCC----C-----------------HHHHHHHHHHHHHcCCEEEecC
Confidence 4566678888889999988887643 2 1223678899999999988754
No 92
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=30.52 E-value=1.4e+02 Score=20.81 Aligned_cols=77 Identities=8% Similarity=-0.028 Sum_probs=42.0
Q ss_pred eEEEEEeccCC--------CCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHH
Q 027914 9 VVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQ 80 (217)
Q Consensus 9 ~~ia~vQ~~~~--------~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (217)
..+.++++... .+.++-.+.+.++++.+.+.++.+++.--............ ..... ...+-+.++
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~-~~~~~-----~~~~n~~l~ 148 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGM-QPADK-----VIQLNKWIK 148 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTC-CCHHH-----HHHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccc-cHHHH-----HHHHHHHHH
Confidence 45667776552 14556666667777777778999888742211111000000 00000 024567788
Q ss_pred HHHHHcCcEEe
Q 027914 81 ELAKELGVVMP 91 (217)
Q Consensus 81 ~~a~~~~i~i~ 91 (217)
++|+++++.++
T Consensus 149 ~~a~~~~v~~i 159 (204)
T 3p94_A 149 EYADKNGLTYV 159 (204)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCcEE
Confidence 99999887653
No 93
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=30.37 E-value=1.1e+02 Score=22.64 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=37.7
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCc
Q 027914 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGV 88 (217)
Q Consensus 9 ~~ia~vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i 88 (217)
+++..+...... ..+.+.+.++.|.+-|++.|+++- + .+..+.+.+.|+++++
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~----~-------------------~~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP----A-------------------LSDWDLVEKLSKQYNI 129 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC----C-------------------GGGHHHHHHHHHHHTC
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC----C-------------------HHHHHHHHHHHHHhCC
Confidence 455555544321 234567788888888999888862 1 1234678889999999
Q ss_pred EEee
Q 027914 89 VMPV 92 (217)
Q Consensus 89 ~i~~ 92 (217)
.+.+
T Consensus 130 ~l~~ 133 (262)
T 3p6l_A 130 KISV 133 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 94
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=30.13 E-value=43 Score=22.17 Aligned_cols=37 Identities=8% Similarity=-0.052 Sum_probs=28.2
Q ss_pred cCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 173 QGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 173 ~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
.+++++++.+.-- .....|...--..|.+.|.++++|
T Consensus 37 ~~~~~vIvL~G~~--------t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 37 EDADAVIVLAGLW--------GTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp SSCSEEEEEGGGT--------TTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccCCEEEEEeCCC--------cCCChHHHHHHHHHHHcCCCEEEE
Confidence 6789998887632 346778877778889999999874
No 95
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=30.08 E-value=87 Score=25.01 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=42.8
Q ss_pred CceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
..|+.++-+|=-..+++.+.+...|++-|+.-+. +. + .-.+.|...+ .+|.+.|++||.+
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----G-n~p~~~~~~l-~~a~~~Gi~VV~~ 277 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGV-GN-----G-NVSAGFLKAM-QEASQMGVVIVRS 277 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TT-----T-BCCHHHHHHH-HHHHHTTCEEEEE
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----C-CCCHHHHHHH-HHHHHCCCEEEEE
Confidence 4699999999999999999998889888876554 11 0 1123344433 5678899999864
No 96
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=30.00 E-value=90 Score=25.00 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=42.4
Q ss_pred CceEEEEEecCC-cchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 150 FAKIGVAICWDQ-WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~-~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
..++.++-+|-- ..+++.+.+...|++=|+.-+. + .. .-...|...+ .+|++.|++||.+
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~-G-~G-----n~p~~~~~~l-~~a~~~Gi~VV~~ 280 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGS-G-AG-----SIHKNQKDVL-KELLKKGLKVVVS 280 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEB-T-TT-----BCCHHHHHHH-HHHHTTTCEEEEE
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-C-CC-----CCcHHHHHHH-HHHHHCCCEEEEe
Confidence 458999999998 8999999888899888777654 1 10 1123344333 5777899999863
No 97
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.96 E-value=93 Score=20.22 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCcE-EeeeeeeecCCceEEEEEEECCCCCeeeee
Q 027914 76 ILKMQELAKELGVV-MPVSFFEEANNAHYNSIAIIDADGSDLGLY 119 (217)
Q Consensus 76 ~~~l~~~a~~~~i~-i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y 119 (217)
++.+.+.+++.++. ++.+ +.......+ +++.||+|..+..+
T Consensus 77 vd~~~~~l~~~G~~~~~~~-p~~~~~G~~--~~~~DPdGn~iel~ 118 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD-PTDMPDGKK--AIVLDPDGHSIELC 118 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE-EEECC-CEE--EEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCceeccC-ceeCCCccE--EEEECCCCCEEEEE
Confidence 55666667777887 5443 333222222 78999999876553
No 98
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=29.89 E-value=1.1e+02 Score=23.75 Aligned_cols=47 Identities=21% Similarity=0.233 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhCCCc-EEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 26 LATAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
-+...+.+++|.+.|+. +|++++. +.. .-.+.+.+.|+++++.+++.
T Consensus 80 ~~~~~~~v~ea~~~Gi~~vVi~t~G----~~~-----------------~~~~~l~~~A~~~gi~viGP 127 (294)
T 2yv1_A 80 APFAKDAVFEAIDAGIELIVVITEH----IPV-----------------HDTMEFVNYAEDVGVKIIGP 127 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSC----CCH-----------------HHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCC----CCH-----------------HHHHHHHHHHHHcCCEEEcC
Confidence 34556777888888999 5656663 211 12467888999999977653
No 99
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=29.84 E-value=1.1e+02 Score=22.93 Aligned_cols=39 Identities=10% Similarity=0.182 Sum_probs=22.2
Q ss_pred ceEEEEEeccCCCCHHHHHHH-HHHHHHHHHhCCCcEEEecCcccC
Q 027914 8 EVVVSALQFACTDDVSTNLAT-AERLVRAAHGKGANIILIQELFEG 52 (217)
Q Consensus 8 ~~~ia~vQ~~~~~~~~~n~~~-~~~~i~~a~~~~~dlvv~PE~~~~ 52 (217)
+|||.. .|+.+ .....++ +.+.+ .+.++|||++.|....
T Consensus 28 ~l~v~t--~Ni~~-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 28 TLKIAS--WNVDG-LRAWIKKKGLDWV---KEEAPDILCLQETKCS 67 (285)
T ss_dssp CEEEEE--EECSS-HHHHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred ceEEEE--Eeccc-ChhhhhhhHHHHH---HhcCCCEEEEEEeecc
Confidence 455544 55532 2222333 44444 4469999999997653
No 100
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=29.51 E-value=91 Score=24.85 Aligned_cols=60 Identities=15% Similarity=0.090 Sum_probs=42.6
Q ss_pred CceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
..|+.++-+|=-..+++.+.+...|++-|+.-+. +. + .-...|...+ .+|++.|++||.+
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----G-n~p~~~~~~l-~~a~~~Gi~VV~~ 276 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGM-GA-----G-SVSVRGIAGM-RKALEKGVVVMRS 276 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TT-----T-BCCHHHHHHH-HHHHHTTCEEEEE
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----C-CCCHHHHHHH-HHHHHCCceEEEE
Confidence 4689999999999999999998889888876554 11 0 1123344433 5678889999864
No 101
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.45 E-value=1e+02 Score=22.95 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
..+.+.+.++.|.+-|++.|+++- + .+.++.+.+.|+++++.+.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~~~p----~-------------------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIVGVP----N-------------------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEE----C-------------------GGGHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEecC----C-------------------HHHHHHHHHHHHHcCCEEEE
Confidence 356667777777777887777631 1 13457788899999998765
No 102
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=29.42 E-value=89 Score=24.94 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=42.6
Q ss_pred CceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
..|+.++-+|=-..+++.+.+...|++-|+.-+. +. + .-.+.|...+ .+|++.|++||.+
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----G-n~p~~~~~~l-~~a~~~gi~VV~~ 274 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGM-GN-----G-NPFPLTQNAL-EKAAKSGVVVARS 274 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEB-TT-----T-BCCHHHHHHH-HHHHHTTCEEEEE
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----C-CCCHHHHHHH-HHHHHCCCEEEEE
Confidence 4689999999999999999998889888876554 11 0 1123344433 5678889999864
No 103
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=28.87 E-value=46 Score=26.99 Aligned_cols=43 Identities=28% Similarity=0.362 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~ 117 (217)
.+.+.+.++.++.++++++...+.+. -.+.+..+++ .+|+++.
T Consensus 171 ~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~~ 214 (362)
T 2it1_A 171 EVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVI-REGEILQ 214 (362)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEE-ECCEEEE
Confidence 45677788877778887776544332 2344566777 4787654
No 104
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.72 E-value=59 Score=22.35 Aligned_cols=44 Identities=7% Similarity=-0.029 Sum_probs=30.1
Q ss_pred hHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEE
Q 027914 164 PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYT 215 (217)
Q Consensus 164 p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv 215 (217)
|++........+|+|++...-. .....--..+|.-|+++++|++
T Consensus 86 ~~i~d~i~~g~i~lVInt~~~~--------~~~~~d~~~iRR~Av~~~IP~~ 129 (143)
T 2yvq_A 86 SSIRKLIRDGSIDLVINLPNNN--------TKFVHDNYVIRRTAVDSGIPLL 129 (143)
T ss_dssp BCHHHHHHTTSCCEEEECCCCC--------GGGHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHCCCceEEEECCCCC--------CcCCccHHHHHHHHHHhCCCeE
Confidence 6677777777799999987521 1222233566778999999876
No 105
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=28.52 E-value=74 Score=24.57 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=37.2
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.. +..+. ....+.+.+.++.++.+.+|++.....+. ..+.+.++++ .+|+
T Consensus 157 aL~~~P~lLlLDEPts-~LD~~-------------~~~~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~~drv~~l-~~G~ 221 (275)
T 3gfo_A 157 VLVMEPKVLILDEPTA-GLDPM-------------GVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVM-KEGR 221 (275)
T ss_dssp HHTTCCSEEEEECTTT-TCCHH-------------HHHHHHHHHHHHHHHHCCEEEEEESCCSSGGGGCSEEEEE-ETTE
T ss_pred HHHcCCCEEEEECccc-cCCHH-------------HHHHHHHHHHHHHhhCCCEEEEEecCHHHHHHhCCEEEEE-ECCE
Confidence 3445788888888321 11110 01245677788774447777665443322 2445567777 4887
Q ss_pred eee
Q 027914 115 DLG 117 (217)
Q Consensus 115 ~~~ 117 (217)
++.
T Consensus 222 i~~ 224 (275)
T 3gfo_A 222 VIL 224 (275)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 106
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.28 E-value=1.9e+02 Score=23.58 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEecCccc--CcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeee
Q 027914 25 NLATAERLVRAAHGKGANIILIQELFE--GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE 96 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~PE~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~ 96 (217)
..+...++++.+++.|+|+|.|.-+-. ++|...+ ...+.+..|.+.+++.|+.++....+
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~g------------l~~egl~~L~~~~~~~Gl~~~te~~d 215 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQG------------LGLEGLKILKRVSDEYGLGVISEIVT 215 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCC------------CTHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcC------------CCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 577788888888889999998865421 1111111 12356788999999999998876544
No 107
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=28.17 E-value=1.4e+02 Score=20.22 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+...+.++++.+.|+..+++-. |.. .+.+.+.++++++.+++.
T Consensus 88 ~~~~~vv~~~~~~gi~~i~~~~----g~~--------------------~~~l~~~a~~~Gi~vvGp 130 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVWFQY----NTY--------------------NREASKKADEAGLIIVAN 130 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEEECT----TCC--------------------CHHHHHHHHHTTCEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEECC----Cch--------------------HHHHHHHHHHcCCEEEcC
Confidence 4455566666667887665432 211 166888999999997764
No 108
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=27.70 E-value=45 Score=26.90 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~ 117 (217)
.+.+.+.++.++.++++++.....+. ..+.+..+++ .+|+++.
T Consensus 165 ~l~~~l~~l~~~~g~tii~vTHd~~~~~~~adri~vl-~~G~i~~ 208 (348)
T 3d31_A 165 NAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVV-MDGKLIQ 208 (348)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEE-SSSCEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE-ECCEEEE
Confidence 45677888888778887776544332 2344567778 4888754
No 109
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=27.45 E-value=1.4e+02 Score=23.16 Aligned_cols=31 Identities=16% Similarity=0.007 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 19 TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 19 ~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
.-+.+++++++.+.++.|++.|.++.+.+|.
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d 143 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPED 143 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 3468899999999999999999988877774
No 110
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=27.19 E-value=1e+02 Score=24.57 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=42.5
Q ss_pred CceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhccccEEEEeC
Q 027914 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 217 (217)
..++.++-+|=-..+++.+.+...|++=|+.-+. + .. .-.+.|...+ .+|++.|++||.+
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~-G-~G-----n~p~~~~~~l-~~a~~~gi~VV~~ 270 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGV-G-NG-----NLYKSVFDTL-ATAAKTGTAVVRS 270 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEB-T-TT-----BCCHHHHHHH-HHHHHTTCEEEEE
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-C-CC-----CCCHHHHHHH-HHHHHCCCEEEEE
Confidence 4689999999999999999988888887776554 1 10 1123344433 5678889999864
No 111
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=26.51 E-value=55 Score=22.80 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCcEEeeeeeeecCC-ceEEEEEEECCCCCeeeeeec
Q 027914 77 LKMQELAKELGVVMPVSFFEEANN-AHYNSIAIIDADGSDLGLYRK 121 (217)
Q Consensus 77 ~~l~~~a~~~~i~i~~g~~~~~~~-~~~Ns~~~i~~~G~~~~~y~K 121 (217)
+.+.++++.+++.+.. ...+ ....+.+++|++|.++..|..
T Consensus 104 ~~~~~~~~~~g~~~~~----~~~~~~~~~~~~lID~~G~i~~~~~g 145 (170)
T 3me7_A 104 EDLFKLLDAIDFRFMT----AGNDFIHPNVVVVLSPELQIKDYIYG 145 (170)
T ss_dssp HHHHHHHHHTTCCCEE----ETTEEECCCEEEEECTTSBEEEEEES
T ss_pred HHHHHHHHHCCeEEec----CCCccccCceEEEECCCCeEEEEEeC
Confidence 4556666665554332 0000 111257899999998876643
No 112
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=25.54 E-value=42 Score=27.15 Aligned_cols=43 Identities=9% Similarity=0.142 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~ 117 (217)
.+.+.+.++.++.++++++...+.+. ..+.+..+++ .+|+++.
T Consensus 183 ~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~~ 226 (355)
T 1z47_A 183 ELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVL-HEGNVEQ 226 (355)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-ECCEEEE
Confidence 45677788887778887776544322 2344566677 4787654
No 113
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=25.33 E-value=49 Score=26.80 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=38.4
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.- +. +. .....+.+.+.++.++.++++++.....+. ..+.+..+++ .+|+
T Consensus 147 AL~~~P~lLLLDEP~s-~L---D~----------~~r~~l~~~l~~l~~~~g~tvi~vTHd~~~~~~~adri~vl-~~G~ 211 (359)
T 2yyz_A 147 ALVKQPKVLLFDEPLS-NL---DA----------NLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVF-NQGK 211 (359)
T ss_dssp HHTTCCSEEEEESTTT-TS---CH----------HHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEE-ETTE
T ss_pred HHHcCCCEEEEECCcc-cC---CH----------HHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEE-ECCE
Confidence 4445788888888321 11 10 001245677788877778877776544332 2344566677 4787
Q ss_pred eee
Q 027914 115 DLG 117 (217)
Q Consensus 115 ~~~ 117 (217)
++.
T Consensus 212 i~~ 214 (359)
T 2yyz_A 212 LVQ 214 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 114
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=25.31 E-value=1.7e+02 Score=20.23 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=10.8
Q ss_pred EEEEECCCCCeeeee
Q 027914 105 SIAIIDADGSDLGLY 119 (217)
Q Consensus 105 s~~~i~~~G~~~~~y 119 (217)
+.++++++|.++..|
T Consensus 149 ~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 149 WKYLVAPDGKVVGAW 163 (181)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEEcCCCCEEEEe
Confidence 567888888776554
No 115
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=24.95 E-value=82 Score=24.02 Aligned_cols=68 Identities=7% Similarity=0.145 Sum_probs=37.8
Q ss_pred HHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECC
Q 027914 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDA 111 (217)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~ 111 (217)
+..|...+++++++=|-.. +..+. ......+.+.++.++ +.+|++.....+. ..+.+..++++
T Consensus 149 lAraL~~~p~lllLDEPts-~LD~~-------------~~~~l~~~l~~l~~~-g~tii~vtHd~~~~~~~~d~v~~l~- 212 (266)
T 2yz2_A 149 IASVIVHEPDILILDEPLV-GLDRE-------------GKTDLLRIVEKWKTL-GKTVILISHDIETVINHVDRVVVLE- 212 (266)
T ss_dssp HHHHHTTCCSEEEEESTTT-TCCHH-------------HHHHHHHHHHHHHHT-TCEEEEECSCCTTTGGGCSEEEEEE-
T ss_pred HHHHHHcCCCEEEEcCccc-cCCHH-------------HHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE-
Confidence 3445556889999988321 11100 012445677777666 6666665444332 23456677774
Q ss_pred CCCee
Q 027914 112 DGSDL 116 (217)
Q Consensus 112 ~G~~~ 116 (217)
+|+++
T Consensus 213 ~G~i~ 217 (266)
T 2yz2_A 213 KGKKV 217 (266)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78765
No 116
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=24.95 E-value=1.6e+02 Score=19.81 Aligned_cols=18 Identities=22% Similarity=0.254 Sum_probs=12.5
Q ss_pred EEEEEEECCCCCeeeeee
Q 027914 103 YNSIAIIDADGSDLGLYR 120 (217)
Q Consensus 103 ~Ns~~~i~~~G~~~~~y~ 120 (217)
.-+.+++|++|.++..+.
T Consensus 111 ~P~~~lid~~G~i~~~~~ 128 (161)
T 3drn_A 111 ARITFVIDKKGIIRHIYN 128 (161)
T ss_dssp CCEEEEECTTSBEEEEEE
T ss_pred cceEEEECCCCEEEEEEe
Confidence 346778888888766554
No 117
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.74 E-value=1.1e+02 Score=23.19 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=25.2
Q ss_pred HHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeee
Q 027914 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95 (217)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~ 95 (217)
.+.|.+.|+|+||.|-+. ..+.+.++++++.++-|..
T Consensus 99 a~~Ai~AGA~fIvsP~~~--------------------------~~vi~~~~~~gi~~ipGv~ 135 (232)
T 4e38_A 99 ALAAKEAGATFVVSPGFN--------------------------PNTVRACQEIGIDIVPGVN 135 (232)
T ss_dssp HHHHHHHTCSEEECSSCC--------------------------HHHHHHHHHHTCEEECEEC
T ss_pred HHHHHHcCCCEEEeCCCC--------------------------HHHHHHHHHcCCCEEcCCC
Confidence 444566688999877521 3355668888999877754
No 118
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=24.67 E-value=1.7e+02 Score=22.59 Aligned_cols=47 Identities=23% Similarity=0.169 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhCCCc-EEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 26 LATAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
-+...+.++++.+.|+. +|++.+ |+.. ...+.+.+.+++.++.+++.
T Consensus 74 ~~~~~~~~~ea~~~Gi~~vVi~t~----G~~~-----------------~~~~~l~~~a~~~gi~vigP 121 (288)
T 1oi7_A 74 APAAADAALEAAHAGIPLIVLITE----GIPT-----------------LDMVRAVEEIKALGSRLIGG 121 (288)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCS----CCCH-----------------HHHHHHHHHHHHHTCEEEES
T ss_pred HHHHHHHHHHHHHCCCCEEEEECC----CCCH-----------------HHHHHHHHHHHHcCCEEEeC
Confidence 34556777777788888 566665 3221 12467888999999977653
No 119
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=24.65 E-value=52 Score=26.75 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~ 117 (217)
.+.+.+.++.++.++++++...+.+. ..+.+..+++ .+|+++.
T Consensus 177 ~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~~ 220 (372)
T 1g29_1 177 RMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM-NRGVLQQ 220 (372)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-eCCEEEE
Confidence 45677788877778877776544332 2344566777 4787654
No 120
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=24.58 E-value=60 Score=24.74 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeec-CCceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~-~~~~~Ns~~~i~~~G~~~~ 117 (217)
...+.+.++.++ +.+|++.....+ -..+.+..+++ .+|+++.
T Consensus 184 ~l~~~l~~l~~~-g~tiiivtHd~~~~~~~~d~v~~l-~~G~i~~ 226 (256)
T 1vpl_A 184 EVRKILKQASQE-GLTILVSSHNMLEVEFLCDRIALI-HNGTIVE 226 (256)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECCHHHHTTTCSEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHhC-CCEEEEEcCCHHHHHHHCCEEEEE-ECCEEEE
Confidence 345667777554 666665543322 12344566677 4787653
No 121
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=24.51 E-value=1.8e+02 Score=20.27 Aligned_cols=18 Identities=0% Similarity=-0.182 Sum_probs=13.4
Q ss_pred hHHHHHHHHHHHcCcEEe
Q 027914 74 PTILKMQELAKELGVVMP 91 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~ 91 (217)
.+.+.++++|+++++.++
T Consensus 140 ~~n~~~~~~a~~~~v~~i 157 (200)
T 4h08_A 140 VRNQIALKHINRASIEVN 157 (200)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhhcceEEE
Confidence 345778889999988753
No 122
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=24.39 E-value=1.6e+02 Score=23.74 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEe----cCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeee
Q 027914 24 TNLATAERLVRAAHGKGANIILI----QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE 97 (217)
Q Consensus 24 ~n~~~~~~~i~~a~~~~~dlvv~----PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~ 97 (217)
++.+...++++.+++.|+|++-| |+.+..+| .+ .+.+-+..+++.+++.|+.++....+.
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f--~g------------lg~egl~~l~~~~~e~Gl~~~te~~d~ 180 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSF--QG------------LGEKGLEYLREAADKYGMYVVTEALGE 180 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSC--CC------------CTHHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhh--cC------------CCHHHHHHHHHHHHHcCCcEEEEeCCH
Confidence 35778888888888999999876 34322111 11 123567889999999999988765543
No 123
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=24.23 E-value=1.2e+02 Score=23.54 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=24.9
Q ss_pred EEEecCCcchHHHHHHHHcCCcEEEeccCC
Q 027914 155 VAICWDQWFPEAARAMVLQGAEILFYPTAI 184 (217)
Q Consensus 155 ~~IC~d~~~p~~~~~~~~~g~dlil~~~~~ 184 (217)
+++.+-+..|+-.+.....|+|-+++-|+.
T Consensus 211 v~vGfGIst~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 211 ALLGFGISEPAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp EEECSSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 355788889999987778999999998875
No 124
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=24.00 E-value=1.4e+02 Score=23.40 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCCCcEE-EecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee-eeee
Q 027914 25 NLATAERLVRAAHGKGANII-LIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlv-v~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (217)
+.+...++.+.|.+.|+|-+ +.|-+... .+ .....+.++.+++..++.|++ ..|.
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~~----~~-------------~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYSK----PS-------------QEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSC----CC-------------HHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCC----CC-------------HHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 46667777888888899854 44433221 11 135678888888887777644 4443
No 125
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=23.81 E-value=1.4e+02 Score=23.13 Aligned_cols=51 Identities=16% Similarity=0.254 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhCCCcEE-EecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 25 NLATAERLVRAAHGKGANII-LIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlv-v~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
+.+...++.+.|.+.|+|-+ +.|-+... .+ .....+.++.+++..++.|+.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~----~s-------------~~~l~~~f~~ia~a~~lPiil 131 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYNK----PT-------------QEGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSC----CC-------------HHHHHHHHHHHHHHCSSCEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCC----CC-------------HHHHHHHHHHHHHhCCCCEEE
Confidence 45667778888888899854 34433221 11 134667888888887777654
No 126
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.80 E-value=72 Score=21.06 Aligned_cols=21 Identities=10% Similarity=0.343 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEe
Q 027914 26 LATAERLVRAAHGKGANIILI 46 (217)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~ 46 (217)
.+.|.++|++|++.|+++.|.
T Consensus 89 kewikdfieeakergvevfvv 109 (162)
T 2l82_A 89 KEWIKDFIEEAKERGVEVFVV 109 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEEE
Confidence 356778999999999998764
No 127
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.53 E-value=1.1e+02 Score=23.52 Aligned_cols=30 Identities=23% Similarity=0.204 Sum_probs=24.7
Q ss_pred EEEecCCcchHHHHHHHHcCCcEEEeccCC
Q 027914 155 VAICWDQWFPEAARAMVLQGAEILFYPTAI 184 (217)
Q Consensus 155 ~~IC~d~~~p~~~~~~~~~g~dlil~~~~~ 184 (217)
+++.+-+..|+-.+.....|+|.+++-|..
T Consensus 209 v~vGfGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 209 PLLGFGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp EEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 456778888999987778999999998874
No 128
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=23.05 E-value=1.6e+02 Score=22.01 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEec
Q 027914 23 STNLATAERLVRAAHGKGANIILIQ 47 (217)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~P 47 (217)
+..++.+.+.++.|.+-|++.|++.
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 5678888899999999999998874
No 129
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=23.01 E-value=44 Score=27.36 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGL 118 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~~ 118 (217)
.+.+.+.++.++.++++++-....+. -.+-+.++++ .+|+++..
T Consensus 171 ~l~~~l~~l~~~~g~tii~vTHd~~ea~~~aDri~vl-~~G~i~~~ 215 (381)
T 3rlf_A 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVL-DAGRVAQV 215 (381)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSCHHHHHHHCSEEEEE-ETTEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEE-ECCEEEEE
Confidence 45677888888888888776544322 2344566677 47876543
No 130
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=22.97 E-value=85 Score=24.90 Aligned_cols=30 Identities=30% Similarity=0.425 Sum_probs=24.5
Q ss_pred EEEEecCCcchHHHHHHHHcCCcEEEeccC
Q 027914 154 GVAICWDQWFPEAARAMVLQGAEILFYPTA 183 (217)
Q Consensus 154 g~~IC~d~~~p~~~~~~~~~g~dlil~~~~ 183 (217)
++.|+-|.+.|++.+...+.|+++|--.+.
T Consensus 85 ~vpiSIDT~~~~Va~aAl~aGa~iINDVsg 114 (314)
T 2vef_A 85 DVLISIDTWKSQVAEAALAAGADLVNDITG 114 (314)
T ss_dssp CCEEEEECSCHHHHHHHHHTTCCEEEETTT
T ss_pred CceEEEeCCCHHHHHHHHHcCCCEEEECCC
Confidence 345688999999999998899998876665
No 131
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=22.93 E-value=54 Score=23.16 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=19.8
Q ss_pred ceeEecCCceEEEEEecCCcchHHHHH
Q 027914 143 FKVFQTKFAKIGVAICWDQWFPEAARA 169 (217)
Q Consensus 143 ~~~~~~~~~~ig~~IC~d~~~p~~~~~ 169 (217)
..+|..||...+...|+|...|.+.+.
T Consensus 134 ~~v~~LPG~P~~~~~~~~~v~P~L~~~ 160 (167)
T 2g2c_A 134 ALIVNAPSSSGGITDTWAVISPVIPNI 160 (167)
T ss_dssp CEEEEECSSHHHHHHHHHHHGGGHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 368888888888888888556666544
No 132
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=22.89 E-value=88 Score=23.37 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee
Q 027914 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (217)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (217)
+.+.+.++.|.+-|++.|+++-.... . ...+..+.+.++++++.+.+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~----~---------------~~~l~~l~~~a~~~Gv~l~l 130 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLP----E---------------QPDLAALGRRLARHGLQLLV 130 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCC----S---------------SCCHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCC----c---------------HHHHHHHHHHHHhcCCEEEE
Confidence 66778888888899998877542211 0 11467788888888888765
No 133
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=22.83 E-value=61 Score=26.26 Aligned_cols=68 Identities=18% Similarity=0.114 Sum_probs=38.0
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.- +..+. ....+.+.+.++.++.++++++-....+. -.+-+.++++ .+|+
T Consensus 152 AL~~~P~lLLLDEPts-~LD~~-------------~r~~l~~~l~~~~~~~g~tvi~vTHd~~ea~~~aDri~vl-~~G~ 216 (359)
T 3fvq_A 152 ALAPDPELILLDEPFS-ALDEQ-------------LRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVM-KQGR 216 (359)
T ss_dssp HHTTCCSEEEEESTTT-TSCHH-------------HHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHCSEEEEE-ETTE
T ss_pred HHHcCCCEEEEeCCcc-cCCHH-------------HHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHCCEEEEE-ECCE
Confidence 4445788888888221 11000 01234456777777888888776554322 2344466677 4787
Q ss_pred eeee
Q 027914 115 DLGL 118 (217)
Q Consensus 115 ~~~~ 118 (217)
++..
T Consensus 217 i~~~ 220 (359)
T 3fvq_A 217 ILQT 220 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 134
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=22.71 E-value=1.3e+02 Score=23.49 Aligned_cols=54 Identities=11% Similarity=0.200 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhCCCcEE-EecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEee-eee
Q 027914 25 NLATAERLVRAAHGKGANII-LIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFF 95 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlv-v~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~ 95 (217)
+.+...++.+.|.+.|+|-+ +.|-+... .+ .....+.++.+|+..++.|++ ..|
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~----~s-------------~~~l~~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNK----PS-------------QEGMYQHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSC----CC-------------HHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCC----CC-------------HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 45666778888888899854 33433221 11 134677888888877777644 444
No 135
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=22.69 E-value=1.2e+02 Score=23.46 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe----cCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeee
Q 027914 25 NLATAERLVRAAHGKGANIILI----QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE 97 (217)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~----PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~ 97 (217)
+.+...++++.+++.|+|++-| |+.+..+|- + .+.+-+..+++.+++.|+.++....+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~--g------------~g~~gl~~l~~~~~~~Gl~~~te~~d~ 112 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQ--G------------LGLEGLKLLRRAGDEAGLPVVTEVLDP 112 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCC--C------------CTHHHHHHHHHHHHHHTCCEEEECCCG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhc--C------------CCHHHHHHHHHHHHHcCCcEEEecCCH
Confidence 4677778888888889999876 443221111 1 013567888999999999987776543
No 136
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=22.59 E-value=1.5e+02 Score=19.79 Aligned_cols=15 Identities=7% Similarity=0.104 Sum_probs=10.6
Q ss_pred EEEEEECCCCCeeee
Q 027914 104 NSIAIIDADGSDLGL 118 (217)
Q Consensus 104 Ns~~~i~~~G~~~~~ 118 (217)
-+.+++|++|+++..
T Consensus 115 P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 115 PSVFLVNRNNELSAR 129 (152)
T ss_dssp SEEEEEETTTEEEEE
T ss_pred ceEEEECCCCeEEEe
Confidence 367788888876644
No 137
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=22.32 E-value=78 Score=24.37 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=16.5
Q ss_pred HHHHHHHHcCCcEEEeccCC
Q 027914 165 EAARAMVLQGAEILFYPTAI 184 (217)
Q Consensus 165 ~~~~~~~~~g~dlil~~~~~ 184 (217)
+..+.+.+.|+|+|+.++|.
T Consensus 90 ~~~~~L~~~Gad~IVIaCNT 109 (268)
T 3s81_A 90 RYLHMLEDAGAECIVIPCNT 109 (268)
T ss_dssp HHHHHHHHTTCSEEECSCSG
T ss_pred HHHHHHHHcCCCEEEEeCCC
Confidence 34567788999999999994
No 138
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=22.13 E-value=24 Score=27.67 Aligned_cols=36 Identities=22% Similarity=0.463 Sum_probs=25.6
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 14 vQ~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
.|+++..|.+..-+.+.+-++.+.+.|+|+|..|+.
T Consensus 62 ~QF~~~EDl~~YPRtle~D~~ll~~~gvD~vF~P~~ 97 (285)
T 3mxt_A 62 MQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDA 97 (285)
T ss_dssp GGCCTTSCTTTSCCCHHHHHHHHHHTTCSEEECCCH
T ss_pred cccCCchhhhcCCCCHHHHHHHHHHCCCCEEECCCH
Confidence 366666676665555666666667789999999973
No 139
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.05 E-value=98 Score=16.23 Aligned_cols=19 Identities=26% Similarity=0.333 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhCC
Q 027914 22 VSTNLATAERLVRAAHGKG 40 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~ 40 (217)
..+|++.+.+.|--|.++|
T Consensus 6 ~~d~I~aiEQqiyvA~seG 24 (40)
T 1gp8_A 6 SAANKDAIRKQMDAAASKG 24 (40)
T ss_dssp HHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHhcC
Confidence 5789999999999887765
No 140
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=22.03 E-value=87 Score=21.19 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (217)
.+...+..+.++.++-.+.|+++|...
T Consensus 50 ~C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 50 GATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 356667777777777777788887654
No 141
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.93 E-value=1.4e+02 Score=23.27 Aligned_cols=45 Identities=18% Similarity=0.194 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCCc-EEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 28 TAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 28 ~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
...+.++++.+.|+. +|++.+. +.. .-.+.+.+.++++++.+++.
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~G----~~~-----------------~~~~~l~~~A~~~gi~viGP 128 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITEG----IPV-----------------HDTMRFVNYARQKGATIIGP 128 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCC----CCH-----------------HHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEECCC----CCH-----------------HHHHHHHHHHHHcCCEEEcC
Confidence 445666777777888 5555552 210 12467888999999977653
No 142
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=21.91 E-value=3.1e+02 Score=22.04 Aligned_cols=53 Identities=11% Similarity=0.102 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeee
Q 027914 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (217)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (217)
+.+++++...+.++..++.|.+-||=+= ..|+ +.-...+.+++++.++.|+.+
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIVd~T--~~g~------------------GRd~~~l~~is~~tGv~IV~~ 129 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVVDPT--PNDC------------------GRNPAFLRRVAEETGLNIICA 129 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEECC--CTTT------------------TCCHHHHHHHHHHHCCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEEECC--CCCc------------------CcCHHHHHHHHHHcCCCEEEe
Confidence 3567777788888888889988887432 2221 233577889999999998775
No 143
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=21.76 E-value=1e+02 Score=23.36 Aligned_cols=26 Identities=15% Similarity=0.054 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEec
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQ 47 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (217)
.++.++.+.+.++.|.+-|++.|+.|
T Consensus 108 r~~~~~~~~~~i~~A~~lG~~~v~~~ 133 (290)
T 2zvr_A 108 RKKAIERVVKHTEVAGMFGALVIIGL 133 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEESG
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 35668888999999999999999843
No 144
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=21.71 E-value=2.9e+02 Score=22.05 Aligned_cols=65 Identities=12% Similarity=-0.004 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCcccCccc--CccchhhHHhhcCCCCCChHHHHHHHHHHHcC--cEEee
Q 027914 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYF--CQAQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (217)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--i~i~~ 92 (217)
.+..++.+.+.++.|.+-|++.|++.-.. .++. ......+..+.. .+.+..+.+.+++++ +.+.+
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv~~g~-~~~~~~~~~~~~~~~~~~-----~e~L~~l~~~A~~~G~~v~l~l 179 (386)
T 1muw_A 111 RRYALRKTIRNIDLAVELGAKTYVAWGGR-EGAESGAAKDVRVALDRM-----KEAFDLLGEYVTSQGYDIRFAI 179 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCTT-CEESSTTSCCHHHHHHHH-----HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCC-CcccccccCCHHHHHHHH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 35667888999999999999988763221 1111 010111111111 134677777888888 87765
No 145
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=21.52 E-value=24 Score=28.09 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=25.8
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCc
Q 027914 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (217)
Q Consensus 15 Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (217)
|+....|.+..-+.+.+-++.+.+.|+|+|..|+.
T Consensus 82 QF~~~EDl~~YPRtle~D~~ll~~~GvD~vF~P~~ 116 (314)
T 3inn_A 82 QFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTV 116 (314)
T ss_dssp GSCTTSSTTTCCCCHHHHHHHHHHTTCSEEECCCH
T ss_pred hcCCCccccccCCCHHHHHHHHHhCCCCEEECCCH
Confidence 66666676666666666666777789999999975
No 146
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=21.49 E-value=97 Score=23.19 Aligned_cols=67 Identities=13% Similarity=0.126 Sum_probs=37.0
Q ss_pred HHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecCCceEEEEEEECCC
Q 027914 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDAD 112 (217)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~ 112 (217)
+..|...+++++++=|-.. +. ++.....+.+.+.++. + +.++++.......-...+..+++ .+
T Consensus 150 lAral~~~p~lllLDEPts-~L-------------D~~~~~~i~~~l~~~~-~-~~tvi~vtH~~~~~~~~d~v~~l-~~ 212 (243)
T 1mv5_A 150 IARAFLRNPKILMLDEATA-SL-------------DSESESMVQKALDSLM-K-GRTTLVIAHRLSTIVDADKIYFI-EK 212 (243)
T ss_dssp HHHHHHHCCSEEEEECCSC-SS-------------CSSSCCHHHHHHHHHH-T-TSEEEEECCSHHHHHHCSEEEEE-ET
T ss_pred HHHHHhcCCCEEEEECCcc-cC-------------CHHHHHHHHHHHHHhc-C-CCEEEEEeCChHHHHhCCEEEEE-EC
Confidence 3344455889999988322 11 1222346677777775 3 66665554332211234566677 47
Q ss_pred CCee
Q 027914 113 GSDL 116 (217)
Q Consensus 113 G~~~ 116 (217)
|+++
T Consensus 213 G~i~ 216 (243)
T 1mv5_A 213 GQIT 216 (243)
T ss_dssp TEEC
T ss_pred CEEE
Confidence 8654
No 147
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=21.47 E-value=48 Score=27.03 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHcCcEEeeeeeeecC-CceEEEEEEECCCCCeee
Q 027914 74 PTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLG 117 (217)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~~~~ 117 (217)
.+.+.+.++.++.++++++....... -.+.+..+++ .+|+++.
T Consensus 179 ~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~~ 222 (372)
T 1v43_A 179 AMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVM-NRGQLLQ 222 (372)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-ECCEEEE
Confidence 45677788887778887776544332 2344566677 4787653
No 148
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=21.33 E-value=3e+02 Score=22.45 Aligned_cols=51 Identities=8% Similarity=-0.030 Sum_probs=33.0
Q ss_pred HHHHHHHHcCCcEEEeccCCCC-CCCCCCCCCHHHHHHHhhhhhccccEEEEe
Q 027914 165 EAARAMVLQGAEILFYPTAIGS-EPQDDGLDSRDHWRRVMQGHAGANVVSYTD 216 (217)
Q Consensus 165 ~~~~~~~~~g~dlil~~~~~~~-~~~~~~~~~~~~~~~~~~~rA~en~~~vv~ 216 (217)
+..+.++..|+|++..-+..+. +|+.....+ ..|...++..+.+.|++++.
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~-~egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLG-LEGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCC-HHHHHHHHHHHHHcCCEEEE
Confidence 4567788899999988776421 233111122 35667777778888988864
No 149
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=21.13 E-value=1.3e+02 Score=22.39 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=21.6
Q ss_pred HHHHHHcCcEEeeeeeeecCCceEEEEEEECCCCCeeee
Q 027914 80 QELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118 (217)
Q Consensus 80 ~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~ 118 (217)
.++++.++++. ...+..+-+.++||++|.+...
T Consensus 130 ~~va~~yGv~~------~~~g~~~R~tFiIDp~g~Ir~~ 162 (219)
T 3tue_A 130 KNIARSYGVLE------ESQGVAYRGLFIIDPHGMLRQI 162 (219)
T ss_dssp SHHHHHTTCEE------TTTTEECEEEEEECTTSBEEEE
T ss_pred cHHHHHcCCcc------cCCCeeEEEEEEECCCCeEEEE
Confidence 45666666652 2334556678999999977544
No 150
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=21.02 E-value=81 Score=23.43 Aligned_cols=24 Identities=13% Similarity=0.257 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEecCcc
Q 027914 24 TNLATAERLVRAAHGKGANIILIQELF 50 (217)
Q Consensus 24 ~n~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (217)
...+.+.+.|+ +.++|+|++.|..
T Consensus 25 ~r~~~i~~~i~---~~~~DIv~LQEv~ 48 (267)
T 3g6s_A 25 YRKDRVCQFIK---DHELDIVGMQEVL 48 (267)
T ss_dssp GTHHHHHHHHH---HTTCSEEEEESBC
T ss_pred HHHHHHHHHHH---HcCCCEEEEecCC
Confidence 44555555554 5699999999964
No 151
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=20.76 E-value=34 Score=26.34 Aligned_cols=69 Identities=7% Similarity=-0.021 Sum_probs=34.2
Q ss_pred HHHHHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeecCCceEEEEEEECCC
Q 027914 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDAD 112 (217)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~ 112 (217)
+..|...+++++++=|-.. +..+. ....+.+.+.++.++.+.++++.......-...+..+++ .+
T Consensus 167 lAraL~~~p~lllLDEPts-~LD~~-------------~~~~i~~~l~~~~~~~g~tviivtHd~~~~~~~d~v~~l-~~ 231 (271)
T 2ixe_A 167 LARALIRKPRLLILDNATS-ALDAG-------------NQLRVQRLLYESPEWASRTVLLITQQLSLAERAHHILFL-KE 231 (271)
T ss_dssp HHHHHTTCCSEEEEESTTT-TCCHH-------------HHHHHHHHHHHCTTTTTSEEEEECSCHHHHTTCSEEEEE-ET
T ss_pred HHHHHhcCCCEEEEECCcc-CCCHH-------------HHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHhCCEEEEE-EC
Confidence 3445556889999988321 11100 001334555555444466665544332211124566677 47
Q ss_pred CCee
Q 027914 113 GSDL 116 (217)
Q Consensus 113 G~~~ 116 (217)
|+++
T Consensus 232 G~i~ 235 (271)
T 2ixe_A 232 GSVC 235 (271)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8765
No 152
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=20.73 E-value=1.2e+02 Score=24.11 Aligned_cols=60 Identities=10% Similarity=0.140 Sum_probs=41.8
Q ss_pred CceEEEEEecCCcchHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCHHHHHHHhhhhhc-cccEEEEeC
Q 027914 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAG-ANVVSYTDC 217 (217)
Q Consensus 150 ~~~ig~~IC~d~~~p~~~~~~~~~g~dlil~~~~~~~~~~~~~~~~~~~~~~~~~~rA~-en~~~vv~~ 217 (217)
..|+.++-+|=-..+++.+.+...|++-|+.-+. +. . .-.+.|...+ .+|+ +.|++||.+
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-G-----n~p~~~~~~l-~~a~~~~gi~VV~~ 275 (331)
T 1agx_A 215 LPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGT-GN-G-----SMANYLVPEV-RKLHDEQGLQIVRS 275 (331)
T ss_dssp CCCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEB-TT-T-----BCCTTHHHHH-HHHHHTTCCEEEEE
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-C-----CCCHHHHHHH-HHHHHcCCCEEEEE
Confidence 4689999999999999999988888887776554 11 0 1123344443 4667 889999863
No 153
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=20.62 E-value=1.8e+02 Score=18.67 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=27.4
Q ss_pred HHHHHHHHHHH---cCcEEeeeeeeecCCceEEEEEEECCCCCeeeee
Q 027914 75 TILKMQELAKE---LGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLY 119 (217)
Q Consensus 75 ~~~~l~~~a~~---~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~~~~~y 119 (217)
-++.+.+.+++ .++.+..+-.....| ..+++.||+|..+..+
T Consensus 85 dv~~~~~~l~~~~~~G~~~~~~p~~~~~g---~~~~~~DPdGn~iel~ 129 (132)
T 3sk2_A 85 DVDKLFNEWTKQKSHQIIVIKEPYTDVFG---RTFLISDPDGHIIRVC 129 (132)
T ss_dssp HHHHHHHHHHHCSSSCCEEEEEEEEETTE---EEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHhhhcCCCEEeeCCcccCce---EEEEEECCCCCEEEEE
Confidence 35666666677 888876553333223 4678889999876544
No 154
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=20.50 E-value=2.1e+02 Score=21.08 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=22.9
Q ss_pred EEEecCCcchHHHHHHHHcCCcEEEeccCC
Q 027914 155 VAICWDQWFPEAARAMVLQGAEILFYPTAI 184 (217)
Q Consensus 155 ~~IC~d~~~p~~~~~~~~~g~dlil~~~~~ 184 (217)
+++..-+..++-...+...|+|.+++-+..
T Consensus 194 i~~~GGI~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 194 VAVGFGVSKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EEEEeecCCHHHHHHHHHcCCCEEEEcHHH
Confidence 455666677677777878899999998874
No 155
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A
Probab=20.49 E-value=1.1e+02 Score=23.56 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=21.0
Q ss_pred EEEEeccCCCCHHHHHHH-HHHHHHHHHhCCCcEEEecCccc
Q 027914 11 VSALQFACTDDVSTNLAT-AERLVRAAHGKGANIILIQELFE 51 (217)
Q Consensus 11 ia~vQ~~~~~~~~~n~~~-~~~~i~~a~~~~~dlvv~PE~~~ 51 (217)
+-++..|+.+ ......+ +.+.| .+.++|||++.|...
T Consensus 62 lrv~t~Nv~g-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~ 99 (318)
T 1hd7_A 62 LKICSWNVDG-LRAWIKKKGLDWV---KEEAPDILCLQETKC 99 (318)
T ss_dssp EEEEEEECSS-HHHHHHTTHHHHH---HHHCCSEEEEECCCC
T ss_pred eEEEEEecCc-chhhhhhhHHHHH---HhhCCCEEEEEEccC
Confidence 4445566543 2222222 44444 456999999999754
No 156
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=20.35 E-value=1.7e+02 Score=18.40 Aligned_cols=44 Identities=14% Similarity=0.175 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCcEEeeeeeeec-CCceEEEEEEECCCCCeeeee
Q 027914 76 ILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDADGSDLGLY 119 (217)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~~-~~~~~Ns~~~i~~~G~~~~~y 119 (217)
++.+.+.+++.++.+..+-.... ....+..+++.||+|..+..+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~ 128 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVS 128 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEE
Confidence 45555666677887765432332 234456778999999876543
No 157
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=20.04 E-value=61 Score=24.31 Aligned_cols=66 Identities=8% Similarity=-0.080 Sum_probs=33.8
Q ss_pred HHhCCCcEEEecCcccCcccCccchhhHHhhcCCCCCChHHHHHHHHHHHcCcEEeeeeeeec-CCceEEEEEEECCCCC
Q 027914 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDADGS 114 (217)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~-~~~~~Ns~~~i~~~G~ 114 (217)
|...+++++++=|-.. +..+. ......+.+.++.+ .+.++++.....+ -..+.+..+++ .+|+
T Consensus 153 aL~~~p~lllLDEPts-~LD~~-------------~~~~l~~~l~~~~~-~g~tvi~vtHd~~~~~~~~d~v~~l-~~G~ 216 (240)
T 1ji0_A 153 ALMSRPKLLMMDEPSL-GLAPI-------------LVSEVFEVIQKINQ-EGTTILLVEQNALGALKVAHYGYVL-ETGQ 216 (240)
T ss_dssp HHTTCCSEEEEECTTT-TCCHH-------------HHHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHCSEEEEE-ETTE
T ss_pred HHHcCCCEEEEcCCcc-cCCHH-------------HHHHHHHHHHHHHH-CCCEEEEEecCHHHHHHhCCEEEEE-ECCE
Confidence 4445788888888321 11100 01234566777765 3555555433321 12344556677 4787
Q ss_pred eee
Q 027914 115 DLG 117 (217)
Q Consensus 115 ~~~ 117 (217)
++.
T Consensus 217 i~~ 219 (240)
T 1ji0_A 217 IVL 219 (240)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
Done!