Query 027919
Match_columns 217
No_of_seqs 345 out of 1843
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 04:53:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 2.2E-50 7.5E-55 334.5 21.3 195 23-217 1-201 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 2.1E-29 7.1E-34 231.3 14.7 152 57-212 288-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 2.7E-28 9.2E-33 225.4 17.6 155 54-212 320-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 1.3E-28 4.5E-33 226.0 14.1 146 63-212 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 4.4E-28 1.5E-32 222.8 14.4 147 63-213 294-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 99.9 6.9E-28 2.4E-32 223.0 13.5 155 55-213 357-515 (531)
7 3c3v_A Arachin ARAH3 isoform; 99.9 5.8E-27 2E-31 217.3 16.9 147 63-213 344-493 (510)
8 1fxz_A Glycinin G1; proglycini 99.9 9E-27 3.1E-31 215.0 17.7 147 63-213 310-459 (476)
9 2d5f_A Glycinin A3B4 subunit; 99.9 4.7E-27 1.6E-31 217.6 13.7 153 56-213 331-485 (493)
10 2cav_A Protein (canavalin); vi 99.9 1.4E-26 4.9E-31 212.2 15.1 155 53-213 244-413 (445)
11 1uij_A Beta subunit of beta co 99.9 1.7E-26 5.9E-31 210.2 15.2 155 53-213 212-384 (416)
12 2ea7_A 7S globulin-1; beta bar 99.9 5.2E-26 1.8E-30 208.0 14.5 155 52-212 228-399 (434)
13 1dgw_A Canavalin; duplicated s 99.9 2.6E-25 8.9E-30 180.7 12.9 150 55-212 3-167 (178)
14 3s7i_A Allergen ARA H 1, clone 99.9 4.2E-25 1.4E-29 201.0 13.1 153 54-212 226-408 (418)
15 2vqa_A SLL1358 protein, MNCA; 99.9 2.7E-23 9.2E-28 184.5 17.2 158 50-214 196-353 (361)
16 2phl_A Phaseolin; plant SEED s 99.9 1.5E-23 5.2E-28 189.6 14.7 137 69-213 223-372 (397)
17 2e9q_A 11S globulin subunit be 99.9 2E-22 6.7E-27 185.3 11.8 137 74-214 46-237 (459)
18 2cav_A Protein (canavalin); vi 99.9 7.3E-22 2.5E-26 181.0 15.0 137 71-212 63-212 (445)
19 2ea7_A 7S globulin-1; beta bar 99.9 6.5E-22 2.2E-26 180.9 14.1 138 70-212 37-188 (434)
20 1uij_A Beta subunit of beta co 99.9 4.3E-22 1.5E-26 181.2 12.2 139 69-212 24-176 (416)
21 2phl_A Phaseolin; plant SEED s 99.9 8.8E-22 3E-26 178.0 12.3 137 69-210 27-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 8.9E-22 3E-26 181.7 11.7 136 75-214 32-229 (476)
23 3ksc_A LEGA class, prolegumin; 99.8 3.2E-21 1.1E-25 178.2 12.3 133 74-210 29-214 (496)
24 3s7i_A Allergen ARA H 1, clone 99.8 7.8E-21 2.7E-25 172.9 13.9 136 69-211 19-169 (418)
25 3qac_A 11S globulin SEED stora 99.8 1.5E-20 5.2E-25 172.5 12.3 137 71-212 31-237 (465)
26 2d5f_A Glycinin A3B4 subunit; 99.8 3.2E-20 1.1E-24 171.9 12.5 137 74-214 28-232 (493)
27 2vqa_A SLL1358 protein, MNCA; 99.8 1.5E-19 5.2E-24 160.3 16.4 149 56-212 21-172 (361)
28 3c3v_A Arachin ARAH3 isoform; 99.8 7.7E-20 2.6E-24 169.6 12.0 136 73-212 30-269 (510)
29 1j58_A YVRK protein; cupin, de 99.8 6.8E-19 2.3E-23 157.6 17.1 154 53-214 223-376 (385)
30 3kgl_A Cruciferin; 11S SEED gl 99.8 1.4E-19 4.9E-24 166.1 11.0 137 71-212 24-245 (466)
31 3fz3_A Prunin; TREE NUT allerg 99.8 2.9E-19 9.9E-24 165.5 10.6 135 74-212 31-297 (531)
32 1j58_A YVRK protein; cupin, de 99.8 3E-18 1E-22 153.4 10.9 147 56-211 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.7 1.1E-17 3.9E-22 118.8 5.2 74 58-132 4-77 (79)
34 3h8u_A Uncharacterized conserv 99.6 5.1E-15 1.8E-19 111.8 10.5 84 90-177 38-121 (125)
35 3ibm_A Cupin 2, conserved barr 99.6 9.6E-14 3.3E-18 111.2 15.3 122 44-172 6-132 (167)
36 2xlg_A SLL1785 protein, CUCA; 99.6 8.7E-15 3E-19 124.0 9.4 114 52-169 8-137 (239)
37 2fqp_A Hypothetical protein BP 99.5 2E-14 7E-19 104.5 9.4 77 90-169 17-93 (97)
38 3l2h_A Putative sugar phosphat 99.5 4.8E-14 1.6E-18 111.5 11.5 86 90-180 45-132 (162)
39 3es1_A Cupin 2, conserved barr 99.5 4.2E-14 1.4E-18 114.2 9.9 81 89-175 77-157 (172)
40 1v70_A Probable antibiotics sy 99.5 8.1E-14 2.8E-18 100.6 10.5 79 88-171 25-103 (105)
41 3i7d_A Sugar phosphate isomera 99.5 1.3E-13 4.5E-18 109.9 10.9 86 89-179 41-129 (163)
42 2oa2_A BH2720 protein; 1017534 99.5 3.5E-13 1.2E-17 105.3 12.5 83 90-172 42-125 (148)
43 3lag_A Uncharacterized protein 99.5 2.4E-14 8.2E-19 105.2 5.2 78 89-168 15-92 (98)
44 1x82_A Glucose-6-phosphate iso 99.5 6.8E-13 2.3E-17 108.4 14.3 84 89-172 65-156 (190)
45 1lr5_A Auxin binding protein 1 99.5 2.7E-13 9.3E-18 107.3 11.6 85 90-175 40-129 (163)
46 3ht1_A REMF protein; cupin fol 99.5 2.7E-13 9.2E-18 104.3 11.0 84 89-178 37-122 (145)
47 2gu9_A Tetracenomycin polyketi 99.5 4.3E-13 1.5E-17 98.5 10.8 79 89-172 19-99 (113)
48 2bnm_A Epoxidase; oxidoreducta 99.5 6.9E-13 2.4E-17 107.7 12.1 82 86-169 112-197 (198)
49 3fjs_A Uncharacterized protein 99.4 2.2E-13 7.7E-18 102.1 8.4 74 89-168 34-107 (114)
50 4e2g_A Cupin 2 conserved barre 99.4 2.3E-13 8E-18 102.6 8.4 77 90-173 40-116 (126)
51 3kgz_A Cupin 2 conserved barre 99.4 1.4E-12 4.7E-17 103.6 12.9 79 89-173 42-120 (156)
52 3jzv_A Uncharacterized protein 99.4 1.4E-12 4.8E-17 104.5 12.3 78 89-172 51-128 (166)
53 1o4t_A Putative oxalate decarb 99.4 6.1E-13 2.1E-17 102.2 9.5 77 88-169 54-130 (133)
54 2b8m_A Hypothetical protein MJ 99.4 1.2E-12 4.2E-17 97.6 9.7 75 90-170 26-101 (117)
55 2pfw_A Cupin 2, conserved barr 99.4 1.6E-12 5.3E-17 96.5 9.9 77 90-174 33-109 (116)
56 2ozi_A Hypothetical protein RP 99.4 3.9E-13 1.3E-17 98.9 6.3 78 90-169 16-93 (98)
57 2vpv_A Protein MIF2, MIF2P; nu 99.4 1.2E-12 4.3E-17 105.0 9.2 75 90-169 87-162 (166)
58 2f4p_A Hypothetical protein TM 99.4 3.6E-12 1.2E-16 99.7 11.6 98 89-199 46-144 (147)
59 1vj2_A Novel manganese-contain 99.4 9.7E-13 3.3E-17 100.0 7.7 78 88-171 45-122 (126)
60 1y9q_A Transcriptional regulat 99.4 2.8E-12 9.6E-17 103.8 10.2 78 87-171 100-179 (192)
61 4i4a_A Similar to unknown prot 99.4 6.6E-12 2.3E-16 94.8 11.4 76 89-170 32-107 (128)
62 1yhf_A Hypothetical protein SP 99.3 5E-12 1.7E-16 93.6 9.9 73 90-170 39-111 (115)
63 2o8q_A Hypothetical protein; c 99.3 3.6E-12 1.2E-16 97.2 9.2 77 92-173 44-120 (134)
64 3cew_A Uncharacterized cupin p 99.3 3.4E-12 1.2E-16 96.3 8.9 80 88-172 23-103 (125)
65 3h7j_A Bacilysin biosynthesis 99.3 4.6E-12 1.6E-16 106.8 9.7 79 91-175 145-224 (243)
66 1rc6_A Hypothetical protein YL 99.3 4.8E-12 1.7E-16 107.7 9.1 78 88-170 176-254 (261)
67 2ozj_A Cupin 2, conserved barr 99.3 1.8E-11 6.3E-16 90.7 10.8 72 91-170 38-109 (114)
68 1sef_A Conserved hypothetical 99.3 4.2E-11 1.4E-15 102.7 12.6 77 88-170 179-257 (274)
69 4e2q_A Ureidoglycine aminohydr 99.3 1.4E-11 4.9E-16 105.7 9.5 107 50-173 39-145 (266)
70 2q30_A Uncharacterized protein 99.3 2.1E-11 7.3E-16 89.1 9.0 77 89-171 31-108 (110)
71 1sfn_A Conserved hypothetical 99.3 5.6E-11 1.9E-15 100.5 12.3 77 88-170 162-239 (246)
72 3lwc_A Uncharacterized protein 99.2 3E-11 1E-15 91.6 9.1 74 90-171 39-112 (119)
73 1juh_A Quercetin 2,3-dioxygena 99.2 5.6E-11 1.9E-15 105.6 12.1 81 90-172 47-130 (350)
74 1y3t_A Hypothetical protein YX 99.2 3.5E-11 1.2E-15 104.8 10.6 79 89-173 44-122 (337)
75 1rc6_A Hypothetical protein YL 99.2 2.2E-11 7.5E-16 103.6 8.8 78 89-171 57-135 (261)
76 1sq4_A GLXB, glyoxylate-induce 99.2 2.4E-11 8.3E-16 104.7 9.0 76 89-170 66-143 (278)
77 3h7j_A Bacilysin biosynthesis 99.2 4.3E-11 1.5E-15 100.9 9.8 73 92-170 35-108 (243)
78 2opk_A Hypothetical protein; p 99.2 1.1E-10 3.6E-15 87.3 9.5 76 90-170 30-109 (112)
79 2i45_A Hypothetical protein; n 99.2 5.1E-11 1.7E-15 87.5 7.5 69 93-168 30-98 (107)
80 1sef_A Conserved hypothetical 99.2 4.5E-11 1.5E-15 102.5 8.3 78 89-171 60-138 (274)
81 2pyt_A Ethanolamine utilizatio 99.2 7.2E-11 2.5E-15 91.2 7.5 72 90-171 56-127 (133)
82 1y3t_A Hypothetical protein YX 99.1 4E-10 1.4E-14 98.1 12.9 75 93-173 219-294 (337)
83 2d40_A Z3393, putative gentisa 99.1 8.8E-11 3E-15 104.5 8.8 77 89-170 98-174 (354)
84 3rns_A Cupin 2 conserved barre 99.1 1.7E-10 5.7E-15 96.3 9.1 73 90-169 152-224 (227)
85 1sq4_A GLXB, glyoxylate-induce 99.1 3.2E-10 1.1E-14 97.7 11.1 84 83-172 183-267 (278)
86 4b29_A Dimethylsulfoniopropion 99.1 2.2E-10 7.6E-15 95.1 8.9 78 88-171 129-206 (217)
87 3rns_A Cupin 2 conserved barre 99.1 3.9E-10 1.3E-14 94.1 9.7 74 90-171 36-109 (227)
88 3d82_A Cupin 2, conserved barr 99.1 5.5E-10 1.9E-14 80.4 8.9 60 102-168 40-99 (102)
89 3nw4_A Gentisate 1,2-dioxygena 99.0 4.2E-10 1.4E-14 100.6 8.8 77 89-171 101-178 (368)
90 4axo_A EUTQ, ethanolamine util 99.0 1.1E-09 3.6E-14 86.6 10.2 73 90-172 65-137 (151)
91 2d40_A Z3393, putative gentisa 99.0 1.2E-09 4.1E-14 97.2 11.6 90 71-170 249-339 (354)
92 3bu7_A Gentisate 1,2-dioxygena 99.0 2.2E-09 7.6E-14 96.8 13.5 77 88-170 291-368 (394)
93 3bu7_A Gentisate 1,2-dioxygena 99.0 1E-09 3.4E-14 99.0 11.1 78 88-170 120-198 (394)
94 4h7l_A Uncharacterized protein 99.0 4.4E-10 1.5E-14 89.2 7.7 71 91-172 47-119 (157)
95 4e2q_A Ureidoglycine aminohydr 99.0 2.1E-09 7.1E-14 92.2 12.0 76 88-169 183-259 (266)
96 1vr3_A Acireductone dioxygenas 99.0 4.7E-09 1.6E-13 85.9 12.2 85 92-178 75-169 (191)
97 1sfn_A Conserved hypothetical 98.9 2.6E-09 8.8E-14 90.2 8.9 73 89-171 48-120 (246)
98 1o5u_A Novel thermotoga mariti 98.9 2.5E-09 8.5E-14 78.8 6.4 63 95-164 35-97 (101)
99 3ebr_A Uncharacterized RMLC-li 98.9 9.4E-09 3.2E-13 81.7 8.9 88 70-170 26-115 (159)
100 2q1z_B Anti-sigma factor CHRR, 98.8 1.2E-08 4.3E-13 83.5 9.7 69 92-170 126-194 (195)
101 3bcw_A Uncharacterized protein 98.8 5.9E-09 2E-13 79.4 6.5 73 90-169 48-120 (123)
102 1yfu_A 3-hydroxyanthranilate-3 98.8 4.3E-08 1.5E-12 78.6 11.4 70 87-159 32-101 (174)
103 3eqe_A Putative cystein deoxyg 98.7 2E-07 7E-12 74.9 13.7 87 90-176 68-158 (171)
104 2o1q_A Putative acetyl/propion 98.7 3.8E-09 1.3E-13 82.5 3.1 91 71-172 29-120 (145)
105 1juh_A Quercetin 2,3-dioxygena 98.7 6E-08 2E-12 86.0 11.0 78 87-170 245-325 (350)
106 2y0o_A Probable D-lyxose ketol 98.7 4.3E-08 1.5E-12 79.0 8.8 81 91-173 53-155 (175)
107 1zrr_A E-2/E-2' protein; nicke 98.7 8.9E-09 3.1E-13 83.4 4.7 70 104-176 93-162 (179)
108 3cjx_A Protein of unknown func 98.7 2.6E-08 9E-13 79.6 6.4 87 72-170 29-117 (165)
109 3st7_A Capsular polysaccharide 98.6 2.2E-07 7.7E-12 81.4 9.4 83 92-176 273-364 (369)
110 3bal_A Acetylacetone-cleaving 98.5 1.4E-07 4.9E-12 74.4 6.1 107 50-170 13-120 (153)
111 1dgw_Y Canavalin; duplicated s 98.5 9.6E-07 3.3E-11 64.0 10.0 73 135-212 6-82 (93)
112 2gm6_A Cysteine dioxygenase ty 98.5 2.1E-06 7.1E-11 71.0 12.9 82 90-172 78-168 (208)
113 3nw4_A Gentisate 1,2-dioxygena 98.5 6.9E-07 2.4E-11 79.8 10.4 72 90-169 278-349 (368)
114 1zvf_A 3-hydroxyanthranilate 3 98.5 1.1E-06 3.8E-11 70.4 10.0 71 98-172 41-115 (176)
115 3d0j_A Uncharacterized protein 98.4 6.5E-07 2.2E-11 69.3 8.1 78 92-171 26-110 (140)
116 2arc_A ARAC, arabinose operon 98.4 1.9E-06 6.4E-11 66.4 10.9 59 105-169 32-91 (164)
117 3o14_A Anti-ecfsigma factor, C 98.4 5.6E-07 1.9E-11 75.2 8.3 89 71-175 27-115 (223)
118 3eln_A Cysteine dioxygenase ty 98.4 7.5E-06 2.6E-10 67.2 13.5 86 90-175 69-163 (200)
119 2qnk_A 3-hydroxyanthranilate 3 98.3 2.6E-06 8.8E-11 73.0 8.7 68 99-170 39-106 (286)
120 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.2 1.6E-05 5.3E-10 61.9 11.0 95 72-170 17-113 (141)
121 3myx_A Uncharacterized protein 98.0 5.5E-05 1.9E-09 63.7 11.1 72 90-170 46-117 (238)
122 3uss_A Putative uncharacterize 98.0 0.00015 5.3E-09 59.9 13.6 83 90-173 72-163 (211)
123 3es4_A Uncharacterized protein 97.7 8.5E-05 2.9E-09 55.8 6.3 62 91-158 42-103 (116)
124 3ejk_A DTDP sugar isomerase; Y 97.6 0.00038 1.3E-08 55.9 10.2 72 97-168 59-139 (174)
125 1yud_A Hypothetical protein SO 97.5 0.0019 6.6E-08 51.5 12.9 132 69-210 26-165 (170)
126 3gbg_A TCP pilus virulence reg 97.5 0.00025 8.5E-09 59.5 8.2 74 90-167 6-83 (276)
127 3myx_A Uncharacterized protein 97.5 0.0004 1.4E-08 58.4 9.1 63 90-158 166-228 (238)
128 2vec_A YHAK, pirin-like protei 97.5 0.00046 1.6E-08 58.6 9.4 73 93-169 66-141 (256)
129 3o14_A Anti-ecfsigma factor, C 97.4 0.00046 1.6E-08 57.4 7.5 78 71-167 133-210 (223)
130 1tq5_A Protein YHHW; bicupin, 97.3 0.0015 5.2E-08 54.9 9.7 74 92-169 42-118 (242)
131 3kmh_A D-lyxose isomerase; cup 97.0 0.0023 7.9E-08 53.5 8.0 75 91-165 106-203 (246)
132 1vrb_A Putative asparaginyl hy 96.9 0.0057 2E-07 53.7 10.6 73 96-169 145-252 (342)
133 3bb6_A Uncharacterized protein 96.9 0.0043 1.5E-07 47.1 8.3 71 99-170 22-99 (127)
134 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0078 2.7E-07 48.6 10.4 68 99-167 56-133 (185)
135 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0044 1.5E-07 50.6 8.8 66 99-166 68-139 (197)
136 2ixk_A DTDP-4-dehydrorhamnose 96.9 0.0095 3.2E-07 48.0 10.6 68 99-167 57-134 (184)
137 1wlt_A 176AA long hypothetical 96.7 0.014 4.9E-07 47.5 10.6 67 98-165 72-149 (196)
138 3ryk_A DTDP-4-dehydrorhamnose 96.7 0.0082 2.8E-07 49.2 9.0 69 99-167 78-157 (205)
139 4gjz_A Lysine-specific demethy 96.6 0.0051 1.7E-07 49.8 7.0 66 94-160 126-226 (235)
140 1dzr_A DTDP-4-dehydrorhamnose 96.5 0.028 9.6E-07 45.2 10.9 67 99-166 55-132 (183)
141 1oi6_A PCZA361.16; epimerase, 96.3 0.033 1.1E-06 45.6 10.6 67 99-166 55-132 (205)
142 2c0z_A NOVW; isomerase, epimer 96.3 0.037 1.3E-06 45.7 10.8 64 99-162 63-137 (216)
143 2p17_A Pirin-like protein; GK1 96.3 0.028 9.6E-07 48.0 10.4 72 92-168 41-114 (277)
144 1upi_A DTDP-4-dehydrorhamnose 96.3 0.053 1.8E-06 45.0 11.5 64 99-162 74-148 (225)
145 1e5r_A Proline oxidase; oxidor 96.2 0.013 4.3E-07 50.6 7.5 72 91-166 91-171 (290)
146 3d8c_A Hypoxia-inducible facto 96.2 0.019 6.5E-07 50.5 8.9 73 96-169 187-296 (349)
147 4hn1_A Putative 3-epimerase in 96.1 0.08 2.7E-06 43.2 11.4 77 99-175 52-139 (201)
148 2qdr_A Uncharacterized protein 96.1 0.061 2.1E-06 45.6 10.8 86 69-170 75-161 (303)
149 3al5_A HTYW5, JMJC domain-cont 95.9 0.064 2.2E-06 46.8 10.9 71 95-168 170-271 (338)
150 2xdv_A MYC-induced nuclear ant 95.9 0.058 2E-06 49.0 10.8 64 95-159 142-223 (442)
151 1j1l_A Pirin; beta sandwich, c 95.9 0.052 1.8E-06 46.7 10.0 73 92-169 41-117 (290)
152 4diq_A Lysine-specific demethy 95.7 0.087 3E-06 48.4 11.1 73 95-168 167-261 (489)
153 2qnk_A 3-hydroxyanthranilate 3 95.2 0.047 1.6E-06 46.7 7.3 62 98-168 214-275 (286)
154 2oyz_A UPF0345 protein VPA0057 94.5 0.15 5.1E-06 36.6 7.2 66 96-169 28-93 (94)
155 1eyb_A Homogentisate 1,2-dioxy 94.5 0.51 1.8E-05 43.0 12.3 104 53-168 118-227 (471)
156 2yu1_A JMJC domain-containing 94.1 0.15 5E-06 46.5 8.0 63 99-161 204-292 (451)
157 3rcq_A Aspartyl/asparaginyl be 94.0 0.19 6.7E-06 40.7 7.8 90 80-175 90-185 (197)
158 3hqx_A UPF0345 protein aciad03 93.9 0.22 7.6E-06 36.7 7.1 68 96-169 42-109 (111)
159 3k2o_A Bifunctional arginine d 93.5 0.24 8.3E-06 43.3 8.2 65 96-160 176-281 (336)
160 2qjv_A Uncharacterized IOLB-li 93.3 0.53 1.8E-05 40.0 9.7 81 90-172 152-248 (270)
161 1xru_A 4-deoxy-L-threo-5-hexos 93.1 0.34 1.2E-05 41.4 8.0 83 90-174 179-267 (282)
162 3dl3_A Tellurite resistance pr 92.8 0.42 1.4E-05 35.7 7.3 59 111-171 37-98 (119)
163 3kv5_D JMJC domain-containing 92.8 0.19 6.5E-06 46.2 6.5 62 99-160 274-361 (488)
164 3kv4_A PHD finger protein 8; e 92.6 0.35 1.2E-05 44.0 8.0 63 99-161 239-327 (447)
165 2rg4_A Uncharacterized protein 92.6 0.29 1E-05 39.9 6.8 76 92-169 104-203 (216)
166 3m3i_A Putative uncharacterize 91.7 4.8 0.00016 33.1 13.7 132 69-210 33-210 (225)
167 3k3o_A PHF8, PHD finger protei 91.7 0.33 1.1E-05 43.0 6.5 62 99-160 155-242 (371)
168 3kv9_A JMJC domain-containing 91.5 0.4 1.4E-05 43.0 6.8 64 96-159 179-269 (397)
169 1tq5_A Protein YHHW; bicupin, 91.4 1.3 4.5E-05 36.8 9.6 70 90-170 159-228 (242)
170 1pmi_A PMI, phosphomannose iso 91.3 0.74 2.5E-05 41.7 8.5 77 90-169 356-437 (440)
171 1ywk_A 4-deoxy-L-threo-5-hexos 90.9 0.54 1.9E-05 40.3 6.8 82 90-173 179-266 (289)
172 3eo6_A Protein of unknown func 90.6 0.64 2.2E-05 33.9 6.0 55 97-157 42-96 (106)
173 3loi_A Putative uncharacterize 90.6 5.3 0.00018 31.5 15.0 129 69-210 24-168 (172)
174 1znp_A Hypothetical protein AT 90.5 5 0.00017 31.1 11.8 90 69-159 19-115 (154)
175 3pua_A GRC5, PHD finger protei 90.4 0.45 1.5E-05 42.5 6.1 61 99-159 182-268 (392)
176 2vec_A YHAK, pirin-like protei 90.1 1.8 6.1E-05 36.3 9.3 71 90-167 181-251 (256)
177 1j1l_A Pirin; beta sandwich, c 89.4 4.3 0.00015 34.5 11.3 78 89-171 167-244 (290)
178 1qwr_A Mannose-6-phosphate iso 88.4 1.6 5.5E-05 37.6 8.1 55 90-152 250-304 (319)
179 3g7d_A PHPD; non heme Fe(II) d 86.6 14 0.00047 32.4 12.6 77 75-156 320-397 (443)
180 2wfp_A Mannose-6-phosphate iso 86.6 0.95 3.3E-05 40.3 5.6 55 90-152 323-377 (394)
181 3pur_A Lysine-specific demethy 86.3 0.86 2.9E-05 42.2 5.3 61 99-159 304-390 (528)
182 2p17_A Pirin-like protein; GK1 84.5 2.3 7.9E-05 35.9 6.8 72 89-169 165-241 (277)
183 1zx5_A Mannosephosphate isomer 83.1 4.5 0.00015 34.5 8.1 55 90-154 229-284 (300)
184 2qjv_A Uncharacterized IOLB-li 82.4 14 0.00047 31.2 10.7 71 91-169 29-109 (270)
185 2ypd_A Probable JMJC domain-co 81.9 1.3 4.3E-05 39.5 4.2 38 134-171 292-329 (392)
186 3mdp_A Cyclic nucleotide-bindi 81.9 2.6 8.8E-05 30.1 5.4 53 93-146 29-85 (142)
187 3idb_B CAMP-dependent protein 79.8 6 0.00021 29.1 7.0 51 93-145 61-112 (161)
188 2pqq_A Putative transcriptiona 78.8 4.7 0.00016 28.9 6.0 51 94-145 29-80 (149)
189 1zx5_A Mannosephosphate isomer 78.4 1.7 5.7E-05 37.3 3.8 45 112-156 117-179 (300)
190 1qwr_A Mannose-6-phosphate iso 77.0 1.9 6.5E-05 37.2 3.8 45 112-156 117-179 (319)
191 2oz6_A Virulence factor regula 75.2 8.8 0.0003 29.2 7.0 52 94-146 14-66 (207)
192 3gyd_A CNMP-BD protein, cyclic 74.9 10 0.00035 28.9 7.3 52 93-145 62-114 (187)
193 2fmy_A COOA, carbon monoxide o 74.8 12 0.00041 28.9 7.8 114 94-213 28-191 (220)
194 1ft9_A Carbon monoxide oxidati 74.7 19 0.00063 27.9 8.9 115 93-213 23-187 (222)
195 4ev0_A Transcription regulator 74.5 8.7 0.0003 29.5 6.8 117 94-213 23-187 (216)
196 1xsq_A Ureidoglycolate hydrola 74.2 7.5 0.00026 30.4 6.2 63 106-168 71-139 (168)
197 3d0s_A Transcriptional regulat 73.9 10 0.00036 29.4 7.2 116 95-213 31-201 (227)
198 3iwz_A CAP-like, catabolite ac 72.8 10 0.00035 29.4 6.9 52 94-146 35-87 (230)
199 3dn7_A Cyclic nucleotide bindi 72.5 12 0.00042 28.2 7.1 117 94-213 31-192 (194)
200 2ptm_A Hyperpolarization-activ 72.0 8.1 0.00028 29.6 6.0 49 93-145 94-142 (198)
201 3dv8_A Transcriptional regulat 71.8 11 0.00037 29.0 6.8 119 94-213 27-193 (220)
202 3e97_A Transcriptional regulat 71.8 11 0.00036 29.5 6.8 53 93-146 29-82 (231)
203 2wfp_A Mannose-6-phosphate iso 71.8 3.3 0.00011 36.8 4.0 23 134-156 239-261 (394)
204 3ryp_A Catabolite gene activat 71.5 13 0.00046 28.2 7.2 117 94-213 20-191 (210)
205 3fx3_A Cyclic nucleotide-bindi 70.9 11 0.00036 29.6 6.6 118 94-214 35-203 (237)
206 3b02_A Transcriptional regulat 69.7 11 0.00037 28.7 6.2 114 97-213 3-163 (195)
207 4ava_A Lysine acetyltransferas 69.7 9.7 0.00033 31.7 6.4 51 94-145 37-87 (333)
208 3kcc_A Catabolite gene activat 69.1 14 0.00047 29.7 7.1 117 94-213 70-241 (260)
209 2bdr_A Ureidoglycolate hydrola 68.9 11 0.00036 29.8 6.0 65 105-169 72-142 (175)
210 3la7_A Global nitrogen regulat 68.1 14 0.00048 29.2 6.9 118 93-213 43-217 (243)
211 2z69_A DNR protein; beta barre 68.1 4.7 0.00016 29.1 3.7 52 93-145 35-87 (154)
212 2bgc_A PRFA; bacterial infecti 68.0 12 0.0004 29.5 6.3 71 95-168 20-98 (238)
213 2qcs_B CAMP-dependent protein 67.8 17 0.00059 29.3 7.4 52 93-145 180-233 (291)
214 3bpz_A Potassium/sodium hyperp 67.6 8.7 0.0003 29.5 5.3 48 93-145 95-142 (202)
215 3e6c_C CPRK, cyclic nucleotide 66.5 15 0.0005 29.2 6.6 118 93-213 32-201 (250)
216 1xe7_A YML079WP, hypothetical 66.5 49 0.0017 26.6 13.6 109 92-211 80-199 (203)
217 1zyb_A Transcription regulator 66.0 11 0.00038 29.5 5.8 118 93-213 43-210 (232)
218 2gau_A Transcriptional regulat 65.5 11 0.00038 29.4 5.6 118 93-213 33-204 (232)
219 1pmi_A PMI, phosphomannose iso 64.1 5.7 0.0002 35.8 4.0 21 136-156 267-287 (440)
220 1o5l_A Transcriptional regulat 63.7 13 0.00046 28.7 5.8 52 93-145 22-74 (213)
221 1ywk_A 4-deoxy-L-threo-5-hexos 62.9 30 0.001 29.4 8.0 67 96-168 62-132 (289)
222 3pna_A CAMP-dependent protein 62.0 25 0.00086 25.4 6.8 48 93-145 61-108 (154)
223 2zcw_A TTHA1359, transcription 60.6 18 0.00061 27.5 5.9 115 95-213 7-170 (202)
224 2d93_A RAP guanine nucleotide 60.4 12 0.0004 26.5 4.5 48 93-145 39-87 (134)
225 3tnp_B CAMP-dependent protein 60.3 23 0.0008 30.9 7.3 52 93-146 168-220 (416)
226 4f8a_A Potassium voltage-gated 59.8 24 0.00082 25.3 6.3 49 94-147 51-99 (160)
227 3ocp_A PRKG1 protein; serine/t 59.7 26 0.0009 24.7 6.4 47 94-145 47-93 (139)
228 1o7f_A CAMP-dependent RAP1 gua 56.7 20 0.00068 31.3 6.2 54 93-147 65-121 (469)
229 1vp6_A CNBD, cyclic-nucleotide 52.1 14 0.00048 26.0 3.7 45 94-145 35-79 (138)
230 2qcs_B CAMP-dependent protein 50.9 36 0.0012 27.3 6.5 48 93-145 62-109 (291)
231 3shr_A CGMP-dependent protein 50.7 27 0.00094 28.3 5.8 51 94-145 181-233 (299)
232 3ukn_A Novel protein similar t 49.9 31 0.0011 26.4 5.7 49 93-146 98-146 (212)
233 2xxz_A Lysine-specific demethy 48.9 18 0.0006 31.5 4.4 32 134-165 278-309 (332)
234 1yll_A PA5104, conserved hypot 44.7 26 0.00089 28.0 4.5 34 113-150 141-174 (200)
235 3of1_A CAMP-dependent protein 43.6 35 0.0012 26.4 5.1 48 94-145 149-196 (246)
236 2qdr_A Uncharacterized protein 41.6 51 0.0017 27.9 5.8 65 90-172 216-288 (303)
237 1xru_A 4-deoxy-L-threo-5-hexos 40.7 48 0.0016 28.0 5.7 53 110-168 77-132 (282)
238 3of1_A CAMP-dependent protein 40.7 29 0.00098 26.9 4.2 48 94-146 31-78 (246)
239 1s4c_A Protein HI0227; double- 40.4 47 0.0016 25.0 5.2 53 104-156 60-133 (155)
240 3g7d_A PHPD; non heme Fe(II) d 40.4 48 0.0016 29.1 5.7 74 136-210 156-264 (443)
241 3shr_A CGMP-dependent protein 39.9 46 0.0016 26.8 5.5 49 93-146 62-110 (299)
242 3dkw_A DNR protein; CRP-FNR, H 38.1 9.2 0.00032 29.6 0.8 117 94-213 33-202 (227)
243 3avr_A Lysine-specific demethy 36.1 34 0.0012 31.6 4.4 30 134-163 337-366 (531)
244 4ask_A Lysine-specific demethy 33.4 41 0.0014 30.9 4.4 80 80-163 228-341 (510)
245 3tnp_B CAMP-dependent protein 32.7 65 0.0022 28.0 5.6 52 93-145 290-348 (416)
246 1wgp_A Probable cyclic nucleot 32.6 8.8 0.0003 27.1 -0.1 48 96-145 32-82 (137)
247 4f7z_A RAP guanine nucleotide 30.9 86 0.003 30.5 6.6 54 92-146 64-120 (999)
248 4din_B CAMP-dependent protein 30.3 68 0.0023 27.4 5.2 49 96-145 274-324 (381)
249 1o7f_A CAMP-dependent RAP1 gua 28.4 97 0.0033 26.8 6.0 46 96-145 364-409 (469)
250 2a1x_A Phytanoyl-COA dioxygena 27.9 71 0.0024 26.3 4.8 30 134-163 215-245 (308)
251 4din_B CAMP-dependent protein 27.1 57 0.0019 27.9 4.1 48 93-145 153-200 (381)
252 2opw_A Phyhd1 protein; double- 26.2 54 0.0019 26.7 3.7 28 134-161 227-255 (291)
253 1wy3_A Villin; structural prot 23.8 55 0.0019 18.7 2.3 21 190-210 1-21 (35)
254 1tc3_C Protein (TC3 transposas 22.7 90 0.0031 17.2 3.3 26 189-214 21-46 (51)
255 2fct_A Syringomycin biosynthes 22.4 84 0.0029 25.8 4.2 25 134-158 219-244 (313)
256 1und_A Advillin, P92; actin bi 22.0 62 0.0021 18.7 2.3 22 189-210 2-23 (37)
257 1eyb_A Homogentisate 1,2-dioxy 21.9 1E+02 0.0035 28.0 4.7 51 95-154 347-398 (471)
258 3dkq_A PKHD-type hydroxylase S 21.8 1.1E+02 0.0037 25.0 4.6 63 92-157 100-180 (243)
259 3nnf_A CURA; non-HAEM Fe(II)/a 21.6 88 0.003 27.0 4.1 22 135-156 234-255 (344)
260 2dkz_A Hypothetical protein LO 21.3 66 0.0022 22.2 2.6 30 181-213 47-76 (84)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=2.2e-50 Score=334.47 Aligned_cols=195 Identities=48% Similarity=0.773 Sum_probs=184.9
Q ss_pred cCCCCCccEEeecCCCC-ccccCccccc-CccCCCeeeeC-CCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEc
Q 027919 23 ADPEMLQDVCVADLTSP-IKVNGFPCKA-NFSEMDFFSDK-LAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYA 99 (217)
Q Consensus 23 ~d~~~~~dfcva~~~~~-~~~~g~~ck~-~v~~~df~~~~-~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~ 99 (217)
+||||||||||||++++ +++||||||+ .++++||+|++ +.+++++.++.|+.++.++..++|++++.++++.+++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~ 80 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFA 80 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBCCGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEEC
T ss_pred CCCcccceeEEecCCCCcccccCcccccCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEEC
Confidence 59999999999999998 9999999999 99999999999 999998889999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCcEEEEEEecEEEEEEEecC---CeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcc
Q 027919 100 PGGINPPHTHPRATEIVFVLEGQLDVGFFTTA---NVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGT 176 (217)
Q Consensus 100 PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~---~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~ 176 (217)
||+..++|||++++|++||++|++++++.+.+ ++.+.+.|++||+++||+|.+|++.|.|++++++++++.+++|+.
T Consensus 81 pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~ 160 (201)
T 1fi2_A 81 PGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGI 160 (201)
T ss_dssp TTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCC
T ss_pred CCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCe
Confidence 99999999999888999999999999998544 565678999999999999999999999999999999999999999
Q ss_pred eecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcCCCC
Q 027919 177 QNIALTLFASTPPVADNVLTKTFQIGTKEVEKIKSRLAPKK 217 (217)
Q Consensus 177 ~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~~~~~ 217 (217)
+.++.++|+++|++++++|+++|+++++++++||++|+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~~ 201 (201)
T 1fi2_A 161 VFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201 (201)
T ss_dssp EEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTCC
T ss_pred EehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCCC
Confidence 99999999988889999999999999999999999998763
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=2.1e-29 Score=231.31 Aligned_cols=152 Identities=14% Similarity=0.193 Sum_probs=137.2
Q ss_pred eeeCCC-CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-eE
Q 027919 57 FSDKLA-KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-VL 134 (217)
Q Consensus 57 ~~~~~~-~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~ 134 (217)
.|+... ...++.++.|++++.+++.+||+|++++|+++++++.||++.+||||++|.|++||++|+++++++++++ +.
T Consensus 288 ~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~ 367 (466)
T 3kgl_A 288 TDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRV 367 (466)
T ss_dssp EEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEE
T ss_pred cccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEE
Confidence 444432 3344557889999999999999999999999999999999999999999999999999999999998764 66
Q ss_pred EEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 135 VSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 135 ~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
+..+|++||+++||+|.+|++ |.+++++.+++++++.+|+...++ .++|+ .+|++||+++|+++.+++++||++
T Consensus 368 f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~---~lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 368 FDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR---GLPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG---GSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHhCcCHHHHHHHHhc
Confidence 888999999999999999988 788999999999999999999887 57888 499999999999999999999985
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=2.7e-28 Score=225.40 Aligned_cols=155 Identities=16% Similarity=0.219 Sum_probs=137.9
Q ss_pred CCeeeeCCC-CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-
Q 027919 54 MDFFSDKLA-KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA- 131 (217)
Q Consensus 54 ~df~~~~~~-~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~- 131 (217)
-.+.++..+ ...++.++.|+.++.+++.+||+|+++||++++++|.||++.+||||++|.|++||++|++++++++++
T Consensus 320 ~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g 399 (496)
T 3ksc_A 320 AKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG 399 (496)
T ss_dssp SCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS
T ss_pred hhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC
Confidence 345565442 334566888999999999999999999999999999999999999999999999999999999999876
Q ss_pred CeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 027919 132 NVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKI 209 (217)
Q Consensus 132 ~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l 209 (217)
++.+..+|++||+++||+|.+|++.|. ++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|
T Consensus 400 ~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~---~~p~eVLa~aF~v~~~~v~~L 475 (496)
T 3ksc_A 400 NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVIN---NLPLDVVAATFNLQRNEARQL 475 (496)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTT---TSCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHHCcCHHHHHHH
Confidence 466778899999999999999988775 788999999999999999887 57887 599999999999999999999
Q ss_pred Hhh
Q 027919 210 KSR 212 (217)
Q Consensus 210 ~~~ 212 (217)
++.
T Consensus 476 k~~ 478 (496)
T 3ksc_A 476 KSN 478 (496)
T ss_dssp HHS
T ss_pred Hhc
Confidence 984
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.96 E-value=1.3e-28 Score=225.96 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=135.2
Q ss_pred CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-CeEEEEEeCC
Q 027919 63 KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NVLVSKSIKK 141 (217)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~L~~ 141 (217)
+..++.++.|+.++.+++.+||+|+++|++++++++.||++.+|||||+|.|++||++|++++++++++ ++.+.++|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 445667889999999999999999999999999999999999999999999999999999999999876 4678889999
Q ss_pred CCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 142 GENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 142 GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
||+++||+|.+|++. .|++++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++||++
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~---~ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR---SLPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH---HSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh---hCCHHHHHHHhCCCHHHHHHHHhc
Confidence 999999999999985 57889999999999999999987 67887 599999999999999999999986
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=4.4e-28 Score=222.85 Aligned_cols=147 Identities=18% Similarity=0.265 Sum_probs=135.3
Q ss_pred CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-eEEEEEeCC
Q 027919 63 KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-VLVSKSIKK 141 (217)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~L~~ 141 (217)
...++.++.|+.++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++++| +.+..+|++
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~ 373 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVRE 373 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeC
Confidence 4455567899999999999999999999999999999999999999999999999999999999998653 556678999
Q ss_pred CCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027919 142 GENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 142 GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~ 213 (217)
||+++||+|.+|++.| +++++.+++++++.+|+.+.++ .++|+ .+|++||+++|+++++++++|++..
T Consensus 374 GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~---~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR---MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH---HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH---hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999 7889999999999999999998 77888 4999999999999999999999864
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.95 E-value=6.9e-28 Score=222.97 Aligned_cols=155 Identities=19% Similarity=0.294 Sum_probs=135.1
Q ss_pred CeeeeCCC-CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-
Q 027919 55 DFFSDKLA-KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN- 132 (217)
Q Consensus 55 df~~~~~~-~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~- 132 (217)
-+.|+..+ ...++.++.|+.++.+++.+||+|+++++++++++|.||++.+||||+++.|++||++|++++++++++|
T Consensus 357 rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~ 436 (531)
T 3fz3_A 357 RLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGD 436 (531)
T ss_dssp CCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC
T ss_pred eeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCc
Confidence 45666542 3455678999999999999999999999999999999999999999999999999999999999998764
Q ss_pred eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 133 VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 133 ~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
+.+..+|++||+++||+|++|+.. .+++.+.+++..++++|++..++ .++|++ +|++||+++|+++.+++++||
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk 512 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLK 512 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHH
Confidence 668899999999999999999765 56666777654466899999887 778884 999999999999999999999
Q ss_pred hhc
Q 027919 211 SRL 213 (217)
Q Consensus 211 ~~~ 213 (217)
++-
T Consensus 513 ~~~ 515 (531)
T 3fz3_A 513 YNR 515 (531)
T ss_dssp HSC
T ss_pred hcC
Confidence 863
No 7
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.95 E-value=5.8e-27 Score=217.28 Aligned_cols=147 Identities=16% Similarity=0.247 Sum_probs=135.0
Q ss_pred CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-eEEEEEeCC
Q 027919 63 KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-VLVSKSIKK 141 (217)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~L~~ 141 (217)
..+++.++.|+.++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++++| +.+..+|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 3455668899999999999999999999999999999999999999999999999999999999998764 666678999
Q ss_pred CCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027919 142 GENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 142 GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~ 213 (217)
||+++||+|.+|++.| +++.+.+++++.+.+|+...++ .++|+ .+|++||+++|+++.+++++|++.+
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~---~lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID---NLPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT---TSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH---hCCHHHHHHHHCcCHHHHHHHHhhC
Confidence 9999999999999999 8888889888888899999998 78898 4999999999999999999999875
No 8
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=9e-27 Score=215.03 Aligned_cols=147 Identities=16% Similarity=0.257 Sum_probs=134.8
Q ss_pred CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-eEEEEEeCC
Q 027919 63 KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-VLVSKSIKK 141 (217)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~L~~ 141 (217)
...++.++.|+.++.+++.+||+|+++++++++++++||++.+||||+++.|++||++|++++++++++| +.+..+|++
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~ 389 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQE 389 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcC
Confidence 3445668899999999999999999999999999999999999999999999999999999999998654 556678999
Q ss_pred CCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027919 142 GENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIA--LTLFASTPPVADNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 142 GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~ 213 (217)
||+++||+|.+|++.| +++.+.+++++.+.+|+...++ .++|++ +|++||+++|+++++++++|++.+
T Consensus 390 GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp TCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhC
Confidence 9999999999999999 8889999999988899999887 788984 999999999999999999999875
No 9
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=4.7e-27 Score=217.64 Aligned_cols=153 Identities=19% Similarity=0.336 Sum_probs=137.4
Q ss_pred eeeeCCC-CCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-Ce
Q 027919 56 FFSDKLA-KPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NV 133 (217)
Q Consensus 56 f~~~~~~-~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~ 133 (217)
+.++... .++++.++.|+.++.+++.+||+++++++++++++++||++.+||||+++.|++||++|++++++++++ ++
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~ 410 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNA 410 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCE
Confidence 4444432 556777899999999999999999999999999999999999999999999999999999999999865 45
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVADNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~ 213 (217)
.+..+|++||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++.+++++|++..
T Consensus 411 ~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~~ 485 (493)
T 2d5f_A 411 VFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQG 485 (493)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHSS
T ss_pred EEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhcC
Confidence 556789999999999999999998 458899999999999999999 788984 999999999999999999999875
No 10
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=1.4e-26 Score=212.25 Aligned_cols=155 Identities=17% Similarity=0.173 Sum_probs=134.4
Q ss_pred CCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC
Q 027919 53 EMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN 132 (217)
Q Consensus 53 ~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (217)
...+.|+.+.+++.. ++.|++++.+++.+||+|+++|++++++++.||++.+||||++|.|++||++|+++++++++++
T Consensus 244 ~~~~~~~l~~~~p~~-~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 244 SQDKPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp --CCCEETTSSCCSE-ESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--
T ss_pred CcccceeccccCCCc-cCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 446788888776654 4667799999999999999999999999999999999999999999999999999999998763
Q ss_pred ---------e--EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE-cCCCCcceecc---hhhhcCCCCCCHHHHHH
Q 027919 133 ---------V--LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF-NSQLQGTQNIA---LTLFASTPPVADNVLTK 197 (217)
Q Consensus 133 ---------~--~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~~f~~~~~~p~~vla~ 197 (217)
+ .+..+|++||+++||+|.+|++.|. ++..+++.. ++++|+.+.++ .++|+ .+|++||++
T Consensus 323 ~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~vla~ 397 (445)
T 2cav_A 323 QQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDL 397 (445)
T ss_dssp ---------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG---GSCHHHHHH
T ss_pred cccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh---hCCHHHHHH
Confidence 3 5788999999999999999999998 456666654 55689998887 68888 499999999
Q ss_pred HcCCCHHHHHHHHhhc
Q 027919 198 TFQIGTKEVEKIKSRL 213 (217)
Q Consensus 198 af~~~~~~v~~l~~~~ 213 (217)
+|+++.+++++|++.-
T Consensus 398 af~v~~~~v~~l~~~~ 413 (445)
T 2cav_A 398 TFPGSGEEVEELLENQ 413 (445)
T ss_dssp HSSSCHHHHHHHHHHC
T ss_pred HHCcCHHHHHHHHhcC
Confidence 9999999999999754
No 11
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.94 E-value=1.7e-26 Score=210.23 Aligned_cols=155 Identities=14% Similarity=0.164 Sum_probs=136.6
Q ss_pred CCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC
Q 027919 53 EMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN 132 (217)
Q Consensus 53 ~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (217)
...+.|+.+.++...+ ..+++++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|+++++++++++
T Consensus 212 ~~~~~~~l~~~~p~~~-~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g 290 (416)
T 1uij_A 212 SEDEPFNLRSRNPIYS-NNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416)
T ss_dssp CSSSCEETTSSCCSEE-CSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-
T ss_pred CcccceeccccCCCcc-CCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCC
Confidence 5567888877765554 445589999999999999999999999999999999999999999999999999999998866
Q ss_pred --------------eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC-CCCcceecc---hhhhcCCCCCCHHH
Q 027919 133 --------------VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS-QLQGTQNIA---LTLFASTPPVADNV 194 (217)
Q Consensus 133 --------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~~f~~~~~~p~~v 194 (217)
+.+..+|++||+++||+|.+|++.|. +++.+++++++ ++|+.+.++ .++|+ .+|++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~---~~p~~v 365 (416)
T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR---QIERQV 365 (416)
T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG---GSCHHH
T ss_pred ccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH---hCCHHH
Confidence 45667999999999999999999998 57888888854 599999887 68888 499999
Q ss_pred HHHHcCCCHHHHHHHHhhc
Q 027919 195 LTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 195 la~af~~~~~~v~~l~~~~ 213 (217)
|+++|+++++++++|++.-
T Consensus 366 la~af~~~~~~v~~l~~~~ 384 (416)
T 1uij_A 366 QELAFPGSAQDVERLLKKQ 384 (416)
T ss_dssp HHHHSSSCHHHHHHHTTSC
T ss_pred HHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999853
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.93 E-value=5.2e-26 Score=208.01 Aligned_cols=155 Identities=17% Similarity=0.190 Sum_probs=135.9
Q ss_pred cCCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC
Q 027919 52 SEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA 131 (217)
Q Consensus 52 ~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~ 131 (217)
....+.|+.+.+++.. ++.|+.++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++++
T Consensus 228 ~~~~~~~~l~~~~p~~-~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 228 SSQDEPFNLRNSKPIY-SNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TCSSSCEETTSSCCSE-EETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCcccceeeccCCCce-eCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 3456778887776655 466779999999999999999999999999999999999999999999999999999999875
Q ss_pred C-------------eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE-cCCCCcceecc---hhhhcCCCCCCHHH
Q 027919 132 N-------------VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF-NSQLQGTQNIA---LTLFASTPPVADNV 194 (217)
Q Consensus 132 ~-------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~~f~~~~~~p~~v 194 (217)
+ +.+..+|++||+++||+|.+|++.|. +++.+++++ ++++++.+.++ .++|+ .+|++|
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~v 381 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS---EIPTEV 381 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG---GSCHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh---hCCHHH
Confidence 3 25667999999999999999999998 468888766 45589999888 68888 499999
Q ss_pred HHHHcCCCHHHHHHHHhh
Q 027919 195 LTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 195 la~af~~~~~~v~~l~~~ 212 (217)
|+++|+++.+++++|++.
T Consensus 382 la~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHSSSCHHHHHHHHTT
T ss_pred HHHHHCcCHHHHHHHHhc
Confidence 999999999999999985
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.93 E-value=2.6e-25 Score=180.73 Aligned_cols=150 Identities=14% Similarity=0.173 Sum_probs=122.1
Q ss_pred CeeeeCCCCCCCccCCCCceEEEEec-----CCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe
Q 027919 55 DFFSDKLAKPAATNNTFGSTVTAANV-----QTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT 129 (217)
Q Consensus 55 df~~~~~~~~~~~~~~~g~~v~~~~~-----~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~ 129 (217)
-|+|+........ ...|+.++.++. ..+|+++ ++++.+++++||+..++| |++++|++||++|++++++++
T Consensus 3 p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 3666644333222 456889999877 6788877 479999999999999999 888899999999999999986
Q ss_pred cCCeEEEEEeCCCCEEEEcCCCeEEEEecCCC-cEEEEEEE-cCCCCcceec---c-----hhhhcCCCCCCHHHHHHHc
Q 027919 130 TANVLVSKSIKKGENFVFPRGLVHFQKNNGNV-PASVIAGF-NSQLQGTQNI---A-----LTLFASTPPVADNVLTKTF 199 (217)
Q Consensus 130 ~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~-~a~~l~~~-~s~~pg~~~~---~-----~~~f~~~~~~p~~vla~af 199 (217)
+++. ..+.|++||+++||+|.+|++.|.|++ ++++++++ .+++||.+.. + .++|+ .+|++||+++|
T Consensus 79 ~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~---~~p~~vla~af 154 (178)
T 1dgw_A 79 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASY 154 (178)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHH
T ss_pred CCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh---hCCHHHHHHHH
Confidence 5443 578999999999999999999999986 78888764 5567875433 1 46777 59999999999
Q ss_pred CCCHHHHHHHHhh
Q 027919 200 QIGTKEVEKIKSR 212 (217)
Q Consensus 200 ~~~~~~v~~l~~~ 212 (217)
+++++++++|+..
T Consensus 155 ~v~~~~~~~l~~~ 167 (178)
T 1dgw_A 155 DSPYDEIEQTLLQ 167 (178)
T ss_dssp TSCHHHHHHHTTS
T ss_pred CcCHHHHHHHhcC
Confidence 9999999999943
No 14
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.92 E-value=4.2e-25 Score=200.95 Aligned_cols=153 Identities=15% Similarity=0.174 Sum_probs=132.4
Q ss_pred CCeeeeCCCCCCCccCCCCceEEEEecCCc-CCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC
Q 027919 54 MDFFSDKLAKPAATNNTFGSTVTAANVQTI-PGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN 132 (217)
Q Consensus 54 ~df~~~~~~~~~~~~~~~g~~v~~~~~~~~-Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (217)
..+.|+.+.+++..++. +++++.+++.+| |+|+++|++++++++.||++.+||||+++.|++||++|++++++.++++
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 36888988777766544 557899999999 9999999999999999999999999999999999999999999997654
Q ss_pred -------------------------eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE-cCCCCcceecch---hh
Q 027919 133 -------------------------VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF-NSQLQGTQNIAL---TL 183 (217)
Q Consensus 133 -------------------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~~ 183 (217)
+.+..+|++||+++||+|.+|++.|.+ +..+++.. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 456789999999999999999998864 46665543 566899988874 67
Q ss_pred hcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 184 FASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 184 f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
|+ .+|+++|+++|+++.+++++|++.
T Consensus 383 ~~---~~~~evla~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 383 ID---QIEKQAKDLAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HH---HSCHHHHHHHSSSCHHHHHHHHHT
T ss_pred hh---cCCHHHHHHHhCCCHHHHHHHHhc
Confidence 77 599999999999999999999985
No 15
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=2.7e-23 Score=184.49 Aligned_cols=158 Identities=23% Similarity=0.347 Sum_probs=138.9
Q ss_pred CccCCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe
Q 027919 50 NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT 129 (217)
Q Consensus 50 ~v~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~ 129 (217)
..+.++|+|+.+..++ ..++.|+.++.+....+|++++ +++.+++++||+..++|||+++.|++||++|++++.+.+
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~ 272 (361)
T 2vqa_A 196 AKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFA 272 (361)
T ss_dssp CBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEEC
T ss_pred CCCCcceEeccccCCC-cccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEc
Confidence 5578899999887765 3356788999999999998774 578899999999999999998899999999999999976
Q ss_pred cCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecchhhhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 027919 130 TANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVADNVLTKTFQIGTKEVEKI 209 (217)
Q Consensus 130 ~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l 209 (217)
++|+.+.+.|++||++++|+|.+|++.|.+++++++++++.+.+++...++.+ ++ .+|++||+++|+++++++++|
T Consensus 273 ~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~---~~~~~vl~~~f~~~~~~~~~l 348 (361)
T 2vqa_A 273 SEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LA---SNPSSVLGNTFQISPELTKKL 348 (361)
T ss_dssp STTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HH---TSCHHHHHHHHTCCHHHHTTS
T ss_pred CCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hh---hCCHHHHHHHHCcCHHHHHhh
Confidence 55655578999999999999999999999999999999999999998888764 45 599999999999999999999
Q ss_pred HhhcC
Q 027919 210 KSRLA 214 (217)
Q Consensus 210 ~~~~~ 214 (217)
|+...
T Consensus 349 ~~~~~ 353 (361)
T 2vqa_A 349 PVQDT 353 (361)
T ss_dssp CCSCC
T ss_pred hccCC
Confidence 87654
No 16
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=1.5e-23 Score=189.57 Aligned_cols=137 Identities=20% Similarity=0.192 Sum_probs=119.5
Q ss_pred CCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEec------C-CeEEEEEeCC
Q 027919 69 NTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTT------A-NVLVSKSIKK 141 (217)
Q Consensus 69 ~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~------~-~~~~~~~L~~ 141 (217)
+..+++++.+++.+ ++++++++++.||++.+||||+++.|+.||++|+++++++++ + ++.+...|++
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~ 296 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSK 296 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEET
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecC
Confidence 45566789999877 789999999999999999999999999999999999999987 3 3788999999
Q ss_pred CCEEEEcCCCeEEEEecCCCcEEEEEEEc-CCCCcceecc---hhhhcCCC-CCC-HHHHHHHcCCCHHHHHHHHhhc
Q 027919 142 GENFVFPRGLVHFQKNNGNVPASVIAGFN-SQLQGTQNIA---LTLFASTP-PVA-DNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 142 GD~~~~P~g~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~~f~~~~-~~p-~~vla~af~~~~~~v~~l~~~~ 213 (217)
||+++||+|.+|++.|.+ ++.+++... +++|+.+.++ .++|+..| +|| ++||+++|+++++++++|++..
T Consensus 297 GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~~ 372 (397)
T 2phl_A 297 DDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINKQ 372 (397)
T ss_dssp TCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTTC
T ss_pred CCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhcC
Confidence 999999999999999986 688877554 4589988887 78888533 344 9999999999999999999864
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.87 E-value=2e-22 Score=185.27 Aligned_cols=137 Identities=23% Similarity=0.294 Sum_probs=116.1
Q ss_pred eEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-E------------------
Q 027919 74 TVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-L------------------ 134 (217)
Q Consensus 74 ~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~------------------ 134 (217)
..+.++....|.|++.|++++|+++.||+..+||||+ +.|++||++|++.++++.++++ .
T Consensus 46 G~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~ 124 (459)
T 2e9q_A 46 GFTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQ 124 (459)
T ss_dssp EEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEE
T ss_pred cEEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccc
Confidence 3445566788999999999999999999999999997 7999999999999999865431 1
Q ss_pred --EEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCC--------Ccceecc------------------------
Q 027919 135 --VSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQL--------QGTQNIA------------------------ 180 (217)
Q Consensus 135 --~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------------ 180 (217)
+.+.|++||+++||+|++||+.|.|++++++++++++.+ +..+.++
T Consensus 125 ~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~ 204 (459)
T 2e9q_A 125 HQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGE 204 (459)
T ss_dssp ECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------
T ss_pred cceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccccccc
Confidence 256999999999999999999999999999999998665 2222222
Q ss_pred --hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027919 181 --LTLFASTPPVADNVLTKTFQIGTKEVEKIKSRLA 214 (217)
Q Consensus 181 --~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~~ 214 (217)
.++|+ ++++++|+++|+++.+++++|++...
T Consensus 205 ~~~nif~---gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 205 KSGNIFS---GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp CCCCTTT---TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred cccchhh---cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 36887 69999999999999999999997654
No 18
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.87 E-value=7.3e-22 Score=181.03 Aligned_cols=137 Identities=16% Similarity=0.204 Sum_probs=116.2
Q ss_pred CCceEEEEec--CCcCCCCcCc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEE
Q 027919 71 FGSTVTAANV--QTIPGLNTLG-VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVF 147 (217)
Q Consensus 71 ~g~~v~~~~~--~~~Pgl~~~g-is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~ 147 (217)
.++.+..+.. ...|.+++.+ +++++++++||+..++| |++++|++||++|++++++++++++ +++.+++||+++|
T Consensus 63 e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~ 140 (445)
T 2cav_A 63 QHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKI 140 (445)
T ss_dssp TTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEE
T ss_pred CCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEE
Confidence 4667777643 4557888877 99999999999999999 6678999999999999999876544 7899999999999
Q ss_pred cCCCeEEEEecC-CCcEEEEEEEc-CCCCcce---ecc-----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 148 PRGLVHFQKNNG-NVPASVIAGFN-SQLQGTQ---NIA-----LTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 148 P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~-----~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
|+|.+|++.|.| +++++++++++ +++||.+ .++ .++|+ .+|+++|+++|+++.+++++|+++
T Consensus 141 P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~~ 212 (445)
T 2cav_A 141 QAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASYDSPYDEIEQTLLQ 212 (445)
T ss_dssp CTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTTS
T ss_pred CCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh---cCCHHHHHHHhCCCHHHHHhhhcc
Confidence 999999999998 89999999887 5667643 222 25777 599999999999999999999953
No 19
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.87 E-value=6.5e-22 Score=180.89 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=117.2
Q ss_pred CCCceEEEE--ecCCcCCCCcCc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEE
Q 027919 70 TFGSTVTAA--NVQTIPGLNTLG-VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFV 146 (217)
Q Consensus 70 ~~g~~v~~~--~~~~~Pgl~~~g-is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 146 (217)
..|+.+..+ ...+.|.+++.+ +++++++++||+..+|| |++++|++||++|+++++++++ ++.+.+.+++||+++
T Consensus 37 se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~ 114 (434)
T 2ea7_A 37 NEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQK 114 (434)
T ss_dssp ETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEE
T ss_pred cCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEE
Confidence 456788886 335668888888 99999999999999999 7788999999999999999864 445789999999999
Q ss_pred EcCCCeEEEEecC-CCcEEEEEEEc-CCCCcce---ecch-----hhhcCCCCCCHHHHHHHcCCCHHHHHHHH-hh
Q 027919 147 FPRGLVHFQKNNG-NVPASVIAGFN-SQLQGTQ---NIAL-----TLFASTPPVADNVLTKTFQIGTKEVEKIK-SR 212 (217)
Q Consensus 147 ~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~~-----~~f~~~~~~p~~vla~af~~~~~~v~~l~-~~ 212 (217)
||+|.+|++.|.| ++++++++++. +++||.. .++. ++|+ .+|++||+++|+++.+++++|+ +.
T Consensus 115 iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~~~ 188 (434)
T 2ea7_A 115 IPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR---GFSKNILEASFDSDFKEINRVLFGE 188 (434)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHHTCC
T ss_pred ECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh---cCCHHHHHHHhCCCHHHHHhhhhcc
Confidence 9999999999998 88999999874 6677643 2332 3666 5999999999999999999999 53
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.87 E-value=4.3e-22 Score=181.25 Aligned_cols=139 Identities=17% Similarity=0.255 Sum_probs=116.4
Q ss_pred CCCCceEEEEe--cCCcCCCCcCc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 69 NTFGSTVTAAN--VQTIPGLNTLG-VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 69 ~~~g~~v~~~~--~~~~Pgl~~~g-is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
...|+.+..+. ....+.+++.+ +++++++++||+..+|| |++++|++||++|+++++++++ ++.+++.+++||++
T Consensus 24 ~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~ 101 (416)
T 1uij_A 24 ENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQ 101 (416)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEE
T ss_pred EcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEE
Confidence 35567888763 34457788887 99999999999999999 7778999999999999999875 45578999999999
Q ss_pred EEcCCCeEEEEecC-CCcEEEEEEEc-CCCCcce---ecch-----hhhcCCCCCCHHHHHHHcCCCHHHHHHHH-hh
Q 027919 146 VFPRGLVHFQKNNG-NVPASVIAGFN-SQLQGTQ---NIAL-----TLFASTPPVADNVLTKTFQIGTKEVEKIK-SR 212 (217)
Q Consensus 146 ~~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~~-----~~f~~~~~~p~~vla~af~~~~~~v~~l~-~~ 212 (217)
+||+|.+|++.|.| ++++++++++. +++||.+ .++. ++|+ .+|++||+++|+++++++++|+ ++
T Consensus 102 ~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~~~ 176 (416)
T 1uij_A 102 RIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ---GFSHNILETSFHSEFEEINRVLFGE 176 (416)
T ss_dssp EECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHHTCT
T ss_pred EECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh---cCCHHHHHHHhCcCHHHHHhhhhcc
Confidence 99999999999995 99999999986 5677643 2221 3666 5999999999999999999999 44
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.86 E-value=8.8e-22 Score=178.03 Aligned_cols=137 Identities=12% Similarity=0.121 Sum_probs=117.9
Q ss_pred CCCCceEEEE--ecCCcCCCCcCc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCE-
Q 027919 69 NTFGSTVTAA--NVQTIPGLNTLG-VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGEN- 144 (217)
Q Consensus 69 ~~~g~~v~~~--~~~~~Pgl~~~g-is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~- 144 (217)
...++.+..+ ...+.|.+++.+ ++++++++.||+..+||||. ++|++||++|++++++++++++ +++.|++||+
T Consensus 27 ~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~-a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv~ 104 (397)
T 2phl_A 27 KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQAD-AELLLVVRSGSAILVLVKPDDR-REYFFLTSDNP 104 (397)
T ss_dssp EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEES-EEEEEEEEESEEEEEEEETTTE-EEEEEEESSCT
T ss_pred EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecC-CCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCcc
Confidence 4667788887 556679999988 99999999999999999995 7999999999999999987666 6899999999
Q ss_pred -----EEEcCCCeEEEEecC-CCcEEEEEEEcCCC-Ccc--eecc-----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 145 -----FVFPRGLVHFQKNNG-NVPASVIAGFNSQL-QGT--QNIA-----LTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 145 -----~~~P~g~~H~~~N~g-~~~a~~l~~~~s~~-pg~--~~~~-----~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
++||+|.+|++.|.| ++++++++++++.+ |.. +.++ .++|+ ++|++||+++|+++.+++++|+
T Consensus 105 ~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~---~~~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 105 IFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ---EFSKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp TSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG---GSCHHHHHHHHTSCHHHHHHHH
T ss_pred cccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh---cCCHHHHHHHhCCCHHHHHhhh
Confidence 999999999999999 88999999987543 422 2222 24666 5999999999999999999999
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.86 E-value=8.9e-22 Score=181.72 Aligned_cols=136 Identities=11% Similarity=0.219 Sum_probs=114.6
Q ss_pred EEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe---------------------
Q 027919 75 VTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV--------------------- 133 (217)
Q Consensus 75 v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~--------------------- 133 (217)
.+.++....|.+++.|++++|+++.||+..+||||+ +.|++||++|++.++++.++++
T Consensus 32 ~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~ 110 (476)
T 1fxz_A 32 LIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDR 110 (476)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC------------------C
T ss_pred eEEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccc
Confidence 344466777999999999999999999999999998 6999999999999999975432
Q ss_pred -EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCc--------ceec-------------------------
Q 027919 134 -LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQG--------TQNI------------------------- 179 (217)
Q Consensus 134 -~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg--------~~~~------------------------- 179 (217)
.+.+.|++||+++||+|++||+.|.|++++++++++++.++. .+.+
T Consensus 111 ~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~ 190 (476)
T 1fxz_A 111 HQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKH 190 (476)
T ss_dssp CCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC------------
T ss_pred cceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccccccccc
Confidence 126799999999999999999999999999999999865542 2222
Q ss_pred -------chhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027919 180 -------ALTLFASTPPVADNVLTKTFQIGTKEVEKIKSRLA 214 (217)
Q Consensus 180 -------~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~~ 214 (217)
+.++|+ ++++++|+++|+++.+++++|++...
T Consensus 191 ~~~~~~~~~~if~---gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 191 QQEEENEGGSILS---GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp -------CCCGGG---GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred ccccccccchhhh---cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 236887 69999999999999999999997653
No 23
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.85 E-value=3.2e-21 Score=178.24 Aligned_cols=133 Identities=15% Similarity=0.292 Sum_probs=115.3
Q ss_pred eEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-CeEE-----------------
Q 027919 74 TVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NVLV----------------- 135 (217)
Q Consensus 74 ~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~----------------- 135 (217)
.++.++..+.|+|+++|++++|+++.||++.+||+| ++.|++||++|++.++++.++ ++.+
T Consensus 29 G~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~ 107 (496)
T 3ksc_A 29 GLIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDR 107 (496)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------CCC
T ss_pred cEEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccc
Confidence 466777789999999999999999999999999999 689999999999999998753 2322
Q ss_pred ---EEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcc--------eecc------------------------
Q 027919 136 ---SKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGT--------QNIA------------------------ 180 (217)
Q Consensus 136 ---~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~--------~~~~------------------------ 180 (217)
.+.|++||+|+||+|++||+.|.|+++++++++++..++.. +.++
T Consensus 108 ~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~ 187 (496)
T 3ksc_A 108 HQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENEG 187 (496)
T ss_dssp CCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-----------C
T ss_pred hheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccccccC
Confidence 45999999999999999999999999999999998776432 1111
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 181 LTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 181 ~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
.++|+ +++.++|+.||+++.++++||+
T Consensus 188 ~ni~s---gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 188 NNIFS---GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp CSGGG---GSCHHHHHHHHTCCHHHHHHHT
T ss_pred CCchh---hcCHHHHHHHHCCCHHHHHHHH
Confidence 46787 7999999999999999999998
No 24
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.85 E-value=7.8e-21 Score=172.85 Aligned_cols=136 Identities=16% Similarity=0.267 Sum_probs=111.9
Q ss_pred CCCCceEEEEe-----cCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCC
Q 027919 69 NTFGSTVTAAN-----VQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGE 143 (217)
Q Consensus 69 ~~~g~~v~~~~-----~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD 143 (217)
....+.+..+. ...+|+|++. .++++++.|++..+|| |++|+|++||++|++.++++++ ++.+.+.|++||
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~~--~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GD 94 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQNH--RIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG-NNRKSFNLDEGH 94 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTC--EEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTE
T ss_pred EcCCcEEEEecccCCcchhcccccce--EEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCC
Confidence 34566887773 3578888866 6668899999999999 8899999999999999999986 445789999999
Q ss_pred EEEEcCCCeEEEEecCCC-cEEEEE-EEcCCCCcceec--------chhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027919 144 NFVFPRGLVHFQKNNGNV-PASVIA-GFNSQLQGTQNI--------ALTLFASTPPVADNVLTKTFQIGTKEVEKIKS 211 (217)
Q Consensus 144 ~~~~P~g~~H~~~N~g~~-~a~~l~-~~~s~~pg~~~~--------~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~ 211 (217)
+++||+|.+||+.|.|+. .+++++ ..++++||.+.. ..++|+ ++|++||+++|+++.+++++|+.
T Consensus 95 v~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~---gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 95 ALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ---GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred EEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh---cCCHHHHHHHHCcCHHHHHhhhc
Confidence 999999999999998764 555554 356777876433 135776 69999999999999999999983
No 25
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.83 E-value=1.5e-20 Score=172.50 Aligned_cols=137 Identities=18% Similarity=0.346 Sum_probs=114.5
Q ss_pred CCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-CeEE--------------
Q 027919 71 FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NVLV-------------- 135 (217)
Q Consensus 71 ~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~-------------- 135 (217)
.|+.+...+ .+-+.+++.|++++|+++.||++.+|||| ++.|++||++|++.++++.++ .+.+
T Consensus 31 e~G~~e~~d-~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~ 108 (465)
T 3qac_A 31 ERGLTEVWD-SNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDER 108 (465)
T ss_dssp TTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC--------------
T ss_pred CCcEEEEEC-CCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccccc
Confidence 455555554 45578888999999999999999999999 689999999999999998653 2222
Q ss_pred ----------------------EEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCc---------ceecc----
Q 027919 136 ----------------------SKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQG---------TQNIA---- 180 (217)
Q Consensus 136 ----------------------~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg---------~~~~~---- 180 (217)
.+.+++||++++|+|+.||+.|.|++++++++++++.+.. .+.++
T Consensus 109 ~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~~ 188 (465)
T 3qac_A 109 IREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKPQ 188 (465)
T ss_dssp ----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCCC
T ss_pred cccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCCc
Confidence 4689999999999999999999999999999999886543 23332
Q ss_pred --------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 181 --------------------LTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 181 --------------------~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
.++|+ ++++++|+++|+++.++++||++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 189 QEHSGEHQFSRESRRGERNTGNIFR---GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CSCC--------------CCCCGGG---GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred cccccccccccccccccccccchhh---cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 35787 799999999999999999999864
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.82 E-value=3.2e-20 Score=171.94 Aligned_cols=137 Identities=18% Similarity=0.336 Sum_probs=115.1
Q ss_pred eEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-----------------e---
Q 027919 74 TVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-----------------V--- 133 (217)
Q Consensus 74 ~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-----------------~--- 133 (217)
.+++++....|.|++.|++++++++.||++.+||||+ +.|++||++|++.++++.++. +
T Consensus 28 G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~ 106 (493)
T 2d5f_A 28 GLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQ 106 (493)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-------------
T ss_pred cEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccc
Confidence 4566677888999999999999999999999999998 589999999999999995431 0
Q ss_pred -----EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCc--------ceec---------------------
Q 027919 134 -----LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQG--------TQNI--------------------- 179 (217)
Q Consensus 134 -----~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg--------~~~~--------------------- 179 (217)
...+.|++||+++||+|++||+.|.|+++++++++++..+.. .+.+
T Consensus 107 ~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 186 (493)
T 2d5f_A 107 LQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSH 186 (493)
T ss_dssp CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC--------
T ss_pred cccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccccc
Confidence 125689999999999999999999999999999998854332 2222
Q ss_pred --------------chhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027919 180 --------------ALTLFASTPPVADNVLTKTFQIGTKEVEKIKSRLA 214 (217)
Q Consensus 180 --------------~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~~ 214 (217)
..++|+ ++++++|+++|+++.+++++|++...
T Consensus 187 ~~~~~~~~~~~~~~~~nif~---gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 187 GGRKQGQHQQQEEEGGSVLS---GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp -------------CCCCGGG---GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred ccccccccccccccccchhh---cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 235776 69999999999999999999997654
No 27
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.82 E-value=1.5e-19 Score=160.30 Aligned_cols=149 Identities=18% Similarity=0.252 Sum_probs=124.8
Q ss_pred eeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEE
Q 027919 56 FFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLV 135 (217)
Q Consensus 56 f~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 135 (217)
+.|+....+.. ...|+.++.+...++|...+ +++.++++.||+..++|||+++.|++||++|++++++++++|+..
T Consensus 21 ~~~~~~~~~~~--~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 21 FTYAFSKTPLV--LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp SEECGGGSCCE--EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred eEEEcccCCce--ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 77776544432 24688899999999998774 588999999999999999996799999999999999987655445
Q ss_pred EEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcc---eecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 136 SKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGT---QNIALTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 136 ~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~---~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
.+.|++||+++||+|.+|++.|.++++++++++++..++.. +... +.|+ .+|.++|+++|+++.+.+++|++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~---~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLS---HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHH---TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHH---hCCHHHHHHHhCcCHHHHHhcccc
Confidence 68999999999999999999999999999999998876653 4443 4566 599999999999999999988754
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.81 E-value=7.7e-20 Score=169.58 Aligned_cols=136 Identities=15% Similarity=0.267 Sum_probs=115.1
Q ss_pred ceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-------------------
Q 027919 73 STVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV------------------- 133 (217)
Q Consensus 73 ~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~------------------- 133 (217)
+.+++++..+.|+|++.|++++++++.||+..+||||+ +.|++||++|++.++++.+++.
T Consensus 30 ~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~ 108 (510)
T 3c3v_A 30 GGYIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPP 108 (510)
T ss_dssp TEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC----------
T ss_pred CceEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 34566677888999999999999999999999999998 6999999999999999975320
Q ss_pred ----------------EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcc--------eecc---------
Q 027919 134 ----------------LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGT--------QNIA--------- 180 (217)
Q Consensus 134 ----------------~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~--------~~~~--------- 180 (217)
.+.+.|++||+++||+|++||+.|.|+++++++++++..++.. +.++
T Consensus 109 ~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~~ 188 (510)
T 3c3v_A 109 RRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFLR 188 (510)
T ss_dssp ----------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTGG
T ss_pred ccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccccch
Confidence 0136899999999999999999999999999999998776322 1121
Q ss_pred ---------------------------------------------------hhhhcCCCCCCHHHHHHHcCCC-HHHHHH
Q 027919 181 ---------------------------------------------------LTLFASTPPVADNVLTKTFQIG-TKEVEK 208 (217)
Q Consensus 181 ---------------------------------------------------~~~f~~~~~~p~~vla~af~~~-~~~v~~ 208 (217)
.++|+ ++++++|+++|+++ ++++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~~~La~af~v~~~~~~~~ 265 (510)
T 3c3v_A 189 YQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS---GFTPEFLAQAFQVDDRQIVQN 265 (510)
T ss_dssp GCC------------------------------------------------CCTGG---GSCHHHHHHHHTCCCHHHHHH
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccee---cCCHHHHHHHhCCCHHHHHHH
Confidence 24776 79999999999999 999999
Q ss_pred HHhh
Q 027919 209 IKSR 212 (217)
Q Consensus 209 l~~~ 212 (217)
|++.
T Consensus 266 l~~~ 269 (510)
T 3c3v_A 266 LRGE 269 (510)
T ss_dssp HTTT
T ss_pred hhcc
Confidence 9864
No 29
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=6.8e-19 Score=157.61 Aligned_cols=154 Identities=16% Similarity=0.249 Sum_probs=127.5
Q ss_pred CCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC
Q 027919 53 EMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN 132 (217)
Q Consensus 53 ~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (217)
+..|+|+....+. . ...++.++.+....++..+ ++++.+++++||+..++|||+++.|++||++|++++.+++.+|
T Consensus 223 ~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 223 PYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp SSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 5567787655543 2 2346677777777777543 5689999999999999999998799999999999999986555
Q ss_pred eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 133 VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 133 ~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
+..++.|++||++++|+|.+|++.|.+++++++++++....+....+..++ + .+|+++++++|+++++++++|++.
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~---~~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-A---MLPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-H---TSCHHHHHHHHTCCHHHHTTCCSS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-H---hCCHHHHHHHhCCCHHHHHhhhcc
Confidence 446789999999999999999999999999999999988777776665654 5 499999999999999999999876
Q ss_pred cC
Q 027919 213 LA 214 (217)
Q Consensus 213 ~~ 214 (217)
..
T Consensus 375 ~~ 376 (385)
T 1j58_A 375 KH 376 (385)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 30
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.80 E-value=1.4e-19 Score=166.11 Aligned_cols=137 Identities=18% Similarity=0.322 Sum_probs=113.2
Q ss_pred CCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-eE---------------
Q 027919 71 FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-VL--------------- 134 (217)
Q Consensus 71 ~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~--------------- 134 (217)
.++.+...+ ..-|+|+++|++++|+++.|++.++||+|+ +.|++||++|+++++++.+.. +.
T Consensus 24 e~G~~e~w~-~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~ 101 (466)
T 3kgl_A 24 EAGRIEVWD-HHAPQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPF 101 (466)
T ss_dssp TTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC----
T ss_pred CCcEEEEEC-CCChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccccc
Confidence 344555554 445999999999999999999999999998 799999999999999996521 00
Q ss_pred -------------------------------------------EEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC
Q 027919 135 -------------------------------------------VSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 135 -------------------------------------------~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s 171 (217)
..+.|++||+++||+|.+||+.|.|++++++++++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 102 GEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp -------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 1258999999999999999999999999999999977
Q ss_pred CCCc--------ceecc------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 172 QLQG--------TQNIA------------------LTLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 172 ~~pg--------~~~~~------------------~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
.+.. .+.++ .++|+ +++.++|+++|+++.++++||+..
T Consensus 182 ~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s---GF~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 182 ASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN---GFTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp SSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG---GSCHHHHHHHHTSCHHHHHHHTCT
T ss_pred CCcccccCCceeeeEecCCCccccccccccccccCCCccc---cCCHHHHHHHhCCCHHHHHHHhcc
Confidence 6543 22222 26776 699999999999999999999864
No 31
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.79 E-value=2.9e-19 Score=165.47 Aligned_cols=135 Identities=13% Similarity=0.281 Sum_probs=113.6
Q ss_pred eEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-Ce-------------------
Q 027919 74 TVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NV------------------- 133 (217)
Q Consensus 74 ~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~------------------- 133 (217)
.++.++..++|+|+++|++++|+++.|+++++||+|+ +.|++||++|++.++++.+. .+
T Consensus 31 G~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~ 109 (531)
T 3fz3_A 31 GQIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQ 109 (531)
T ss_dssp EEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC------------
T ss_pred ceEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccccccc
Confidence 4566667889999999999999999999999999998 89999999999999998652 00
Q ss_pred -------------------------------------------------------------EEEEEeCCCCEEEEcCCCe
Q 027919 134 -------------------------------------------------------------LVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 134 -------------------------------------------------------------~~~~~L~~GD~~~~P~g~~ 152 (217)
.+.+.+++||++.+|+|+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG~~ 189 (531)
T 3fz3_A 110 ERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAGVA 189 (531)
T ss_dssp -------------------------------------------------------CCSCEESCCEEEETTEEEEECTTCC
T ss_pred cccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCCCe
Confidence 1145799999999999999
Q ss_pred EEEEecCCCcEEEEEEEcCCCCc--------cee-------------------------------------------cch
Q 027919 153 HFQKNNGNVPASVIAGFNSQLQG--------TQN-------------------------------------------IAL 181 (217)
Q Consensus 153 H~~~N~g~~~a~~l~~~~s~~pg--------~~~-------------------------------------------~~~ 181 (217)
||++|.|+++++++++++..+.- .+. ...
T Consensus 190 ~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (531)
T 3fz3_A 190 YWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQGNGN 269 (531)
T ss_dssp EEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------------------CCS
T ss_pred EEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhcccCC
Confidence 99999999999999998764431 111 113
Q ss_pred hhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027919 182 TLFASTPPVADNVLTKTFQIGTKEVEKIKSR 212 (217)
Q Consensus 182 ~~f~~~~~~p~~vla~af~~~~~~v~~l~~~ 212 (217)
++|+ ++++++|+.||+++.++++||+..
T Consensus 270 nifs---GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 270 NVFS---GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp SGGG---GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred Ceee---cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 6887 799999999999999999999864
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.75 E-value=3e-18 Score=153.42 Aligned_cols=147 Identities=16% Similarity=0.232 Sum_probs=122.2
Q ss_pred eeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEE
Q 027919 56 FFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLV 135 (217)
Q Consensus 56 f~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 135 (217)
++|+....+.. ...|+.++.+....+|.++ ++++.++++.||+..++|||+ +.|++||++|++++.+++++|+.+
T Consensus 48 ~~~~~~~~~~~--~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~ 122 (385)
T 1j58_A 48 MKFSFSDTHNR--LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF 122 (385)
T ss_dssp CEECGGGSCCE--EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eEEEcccCCcc--ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE
Confidence 77766444443 2468899999999999987 569999999999999999999 699999999999999987667655
Q ss_pred EEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCccee--cchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027919 136 SKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQN--IALTLFASTPPVADNVLTKTFQIGTKEVEKIKS 211 (217)
Q Consensus 136 ~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~--~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~~ 211 (217)
.+.|++||+++||+|.+|++.|.+ ++++++.+++...+.... ...++|+ .+|.++|+++|+++.+++++|++
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA---HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH---TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh---cccHHHHHHHhCCCHHHHHhccc
Confidence 669999999999999999999987 568999999887765432 1245666 59999999999999998888764
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.70 E-value=1.1e-17 Score=118.77 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=67.2
Q ss_pred eeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC
Q 027919 58 SDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN 132 (217)
Q Consensus 58 ~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (217)
|+.+.+.+.++|..|. ++.+++.++|+|+++|+++.|+++.||++.+||||++|.|++||++|++++++++++|
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 6777888888777775 5999999999999999999999999999999999999999999999999999998655
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=5.1e-15 Score=111.81 Aligned_cols=84 Identities=19% Similarity=0.235 Sum_probs=73.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
++.+.+++++||+..++|+|++..|++||++|++++.+.+ ++ .+.|++||++++|+|.+|++.|.+++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN--GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST--TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC--Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 4578899999999999999997799999999999998722 44 6799999999999999999999999999999999
Q ss_pred cCCCCcce
Q 027919 170 NSQLQGTQ 177 (217)
Q Consensus 170 ~s~~pg~~ 177 (217)
.+..+++.
T Consensus 114 ~p~~~~~~ 121 (125)
T 3h8u_A 114 APGNAGFA 121 (125)
T ss_dssp ESTTCCCC
T ss_pred CCCcccch
Confidence 87766654
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.56 E-value=9.6e-14 Score=111.22 Aligned_cols=122 Identities=16% Similarity=0.190 Sum_probs=91.7
Q ss_pred Cccccc-CccCCCeeeeCCCCCC---CccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEE
Q 027919 44 GFPCKA-NFSEMDFFSDKLAKPA---ATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVL 119 (217)
Q Consensus 44 g~~ck~-~v~~~df~~~~~~~~~---~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl 119 (217)
|-.=++ .+..+++.|+...... ......|...+.+..... +....++.+.+++++||+..++|+|+. .|++||+
T Consensus 6 ~~~~~~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl 83 (167)
T 3ibm_A 6 GEHEASRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHEH-THVVMVV 83 (167)
T ss_dssp --CCCCEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCSS-CEEEEEE
T ss_pred CccccCceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCCC-cEEEEEE
Confidence 444444 6788899998764321 111235666665543332 222346788999999999999999985 9999999
Q ss_pred ecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecC-CCcEEEEEEEcCC
Q 027919 120 EGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNG-NVPASVIAGFNSQ 172 (217)
Q Consensus 120 ~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~a~~l~~~~s~ 172 (217)
+|++++.+++ + .+.|++||+++||+|.+|++.|.+ ++++++++++...
T Consensus 84 ~G~~~~~i~~---~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 84 RGHAEVVLDD---R--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp ESEEEEEETT---E--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred eCEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 9999999863 4 679999999999999999999999 9999999988765
No 36
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.56 E-value=8.7e-15 Score=124.05 Aligned_cols=114 Identities=19% Similarity=0.169 Sum_probs=85.5
Q ss_pred cCCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEE----
Q 027919 52 SEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGF---- 127 (217)
Q Consensus 52 ~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~---- 127 (217)
+.+||-+..+..+....++.|.....+. +...+.++++.+++++||+..++|+|++..|++||++|++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~ 83 (239)
T 2xlg_A 8 TFDDIPMPKLADPLLIYTPANEIFDIAS----CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQ 83 (239)
T ss_dssp BCSCCCCCCCSSCEEEECTTCCEEEEEE----EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEE
T ss_pred chhhCCCccccccceeecCCceEEEEec----cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecc
Confidence 5667766666544433344443332222 12233467899999999999999999987999999999999998
Q ss_pred ----Eec-------CCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEE-EEEE
Q 027919 128 ----FTT-------ANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASV-IAGF 169 (217)
Q Consensus 128 ----~~~-------~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~-l~~~ 169 (217)
++. .++.+.+.+++||++++|+|.+|.+.|.+++++++ +.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 84 YPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp CCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred cccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 432 12344789999999999999999999999999998 6666
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.55 E-value=2e-14 Score=104.52 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=67.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+.+.+++++||+..++|.|++..|++||++|++++.+++ +. ..+.|++||++++|+|.+|++.|.|+++++++.+-
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~ 93 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE--GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIE 93 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT--EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC--CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEE
Confidence 5788999999999999999998557999999999999853 21 36799999999999999999999999999988763
No 38
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.54 E-value=4.8e-14 Score=111.50 Aligned_cols=86 Identities=22% Similarity=0.229 Sum_probs=74.4
Q ss_pred ceEEEEEEEcCCC-cCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC-CeEEEEecCCCcEEEEE
Q 027919 90 GVSLARIDYAPGG-INPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG-LVHFQKNNGNVPASVIA 167 (217)
Q Consensus 90 gis~~~~~l~PG~-~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g-~~H~~~N~g~~~a~~l~ 167 (217)
++.+.+++++||+ ..++|||+...|++||++|++++.++ ++ .+.|++||+++||+| ..|++.|.+++++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME---ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC---CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 5688899999999 58999996679999999999999986 34 679999999999998 99999999999999999
Q ss_pred EEcCCCCcceecc
Q 027919 168 GFNSQLQGTQNIA 180 (217)
Q Consensus 168 ~~~s~~pg~~~~~ 180 (217)
+.....+....++
T Consensus 120 v~~p~~~~~~~~p 132 (162)
T 3l2h_A 120 IGQRLDQDVVDYP 132 (162)
T ss_dssp EEECCSEEEEEET
T ss_pred EECCCCCCeEecC
Confidence 9887665444443
No 39
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.52 E-value=4.2e-14 Score=114.24 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=73.3
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
.|..+.+++++||+..++|.|.. +|++||++|++++.+++ ++ .++|++||++ ||+|..|+++|.|+++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~-eE~~~VLeGel~l~ld~--ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNS-IDYGIVLEGEIELELDD--GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSE-EEEEEEEESCEEEECGG--GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCc-eEEEEEEeCEEEEEECC--Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 47789999999999999999985 89999999999999862 33 6799999999 9999999999999999999999
Q ss_pred EcCCCCc
Q 027919 169 FNSQLQG 175 (217)
Q Consensus 169 ~~s~~pg 175 (217)
+....|-
T Consensus 151 ~~P~~p~ 157 (172)
T 3es1_A 151 LIEAPAY 157 (172)
T ss_dssp EEECCCC
T ss_pred EcCCCce
Confidence 9888773
No 40
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.52 E-value=8.1e-14 Score=100.57 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=70.3
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
+.++.+.++.++||...++|+|++..|++||++|++++.++ ++ .+.+++||++++|+|..|++.|.+++++++++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 34678889999999999999999768999999999999985 34 67999999999999999999999999999998
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
++..
T Consensus 100 v~~p 103 (105)
T 1v70_A 100 VTAP 103 (105)
T ss_dssp EEES
T ss_pred EeCC
Confidence 8764
No 41
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.50 E-value=1.3e-13 Score=109.86 Aligned_cols=86 Identities=22% Similarity=0.217 Sum_probs=74.8
Q ss_pred CceEEEEEEEcCCCcC-CCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC--CeEEEEecCCCcEEE
Q 027919 89 LGVSLARIDYAPGGIN-PPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG--LVHFQKNNGNVPASV 165 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~-p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g--~~H~~~N~g~~~a~~ 165 (217)
..+.+.+++++||+.. ++|+|+..+|++||++|++++.+++ + .+.|++||+++||+| ..|++.|.+++++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~---~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~ 115 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ---G--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATF 115 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCCCBEEECCSSSCEEE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC---E--EEEeCCCCEEEECCCCCcceEEEECCCCCEEE
Confidence 3678899999999965 7999997679999999999999863 4 679999999999999 999999999999999
Q ss_pred EEEEcCCCCcceec
Q 027919 166 IAGFNSQLQGTQNI 179 (217)
Q Consensus 166 l~~~~s~~pg~~~~ 179 (217)
+++..........+
T Consensus 116 l~v~~p~~~d~~~y 129 (163)
T 3i7d_A 116 LVVGTRTPTETAYY 129 (163)
T ss_dssp EEEEECCSCEEEEE
T ss_pred EEEECCCCCCcccC
Confidence 99988776544444
No 42
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.49 E-value=3.5e-13 Score=105.26 Aligned_cols=83 Identities=17% Similarity=0.199 Sum_probs=71.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
.+++.+++++||...++|+|++..|++||++|++++.+++..+. .+.+.|++||++++|+|.+|++.|.++++++++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 56788999999999999999976799999999999999863211 12379999999999999999999999999999988
Q ss_pred EcCC
Q 027919 169 FNSQ 172 (217)
Q Consensus 169 ~~s~ 172 (217)
+...
T Consensus 122 ~~~~ 125 (148)
T 2oa2_A 122 YAPP 125 (148)
T ss_dssp EESC
T ss_pred ECCC
Confidence 7654
No 43
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.48 E-value=2.4e-14 Score=105.20 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=67.8
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+.|++++||+..++|+|+...|+++|++|++++...+ +......+++||++++|.|..|+..|.|+++++++.+
T Consensus 15 ~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 35789999999999999999998789999999999988753 3333567999999999999999999999999999976
No 44
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.48 E-value=6.8e-13 Score=108.36 Aligned_cols=84 Identities=20% Similarity=0.219 Sum_probs=74.4
Q ss_pred CceEEEEEEEcCCCc------CCCCCCC--CCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCC
Q 027919 89 LGVSLARIDYAPGGI------NPPHTHP--RATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGN 160 (217)
Q Consensus 89 ~gis~~~~~l~PG~~------~p~H~Hp--~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~ 160 (217)
..+.+.+++++||+. .++|+|+ +..|++||++|++++.++++.|+.+.+.|++||++++|+|.+|++.|.++
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 357888889999998 7899998 44799999999999999976566667899999999999999999999999
Q ss_pred CcEEEEEEEcCC
Q 027919 161 VPASVIAGFNSQ 172 (217)
Q Consensus 161 ~~a~~l~~~~s~ 172 (217)
+++++++++...
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 999999888764
No 45
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.48 E-value=2.7e-13 Score=107.33 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=72.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC----CeEEEEEeCCCCEEEEcCCCeEEEEecC-CCcEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA----NVLVSKSIKKGENFVFPRGLVHFQKNNG-NVPAS 164 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~----~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~a~ 164 (217)
.+.+.+++++||...++|+|+. .|++||++|++++.+++.. ++...+.|++||++++|+|.+|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHSC-EEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEESS-CEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECCC-CeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 5788899999999999999985 9999999999999987521 1113679999999999999999999999 89999
Q ss_pred EEEEEcCCCCc
Q 027919 165 VIAGFNSQLQG 175 (217)
Q Consensus 165 ~l~~~~s~~pg 175 (217)
+++++......
T Consensus 119 ~l~i~~~~~~~ 129 (163)
T 1lr5_A 119 VLVIISRPPAK 129 (163)
T ss_dssp EEEEEESSSCC
T ss_pred EEEEECCCCcc
Confidence 99988765433
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.48 E-value=2.7e-13 Score=104.25 Aligned_cols=84 Identities=21% Similarity=0.321 Sum_probs=74.1
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEE--EEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVG--FFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~--~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
..+.+.+++++||+..++|+|+. .|++||++|++++. ++ ++ .+.+++||++++|+|.+|.+.|.++++++++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l 110 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFL 110 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEE
T ss_pred CcEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEE
Confidence 36788999999999999999996 88899999999999 65 34 6799999999999999999999999999999
Q ss_pred EEEcCCCCccee
Q 027919 167 AGFNSQLQGTQN 178 (217)
Q Consensus 167 ~~~~s~~pg~~~ 178 (217)
+++....+....
T Consensus 111 ~i~~~~~~~~~~ 122 (145)
T 3ht1_A 111 VVAPCERPPVRN 122 (145)
T ss_dssp EEEESCCCCCEE
T ss_pred EEECCCCCCeeE
Confidence 998877666543
No 47
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.46 E-value=4.3e-13 Score=98.46 Aligned_cols=79 Identities=22% Similarity=0.334 Sum_probs=69.9
Q ss_pred CceEEEEEEEcCCCcCCCC--CCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 89 LGVSLARIDYAPGGINPPH--THPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H--~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
..+.+.+++++||...++| +|++..|++||++|++++.++ ++ .+.|++||++++|+|.+|++.|.++++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 93 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD---GH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTV 93 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET---TE--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 3568889999999988888 998569999999999999985 34 6799999999999999999999999999999
Q ss_pred EEEcCC
Q 027919 167 AGFNSQ 172 (217)
Q Consensus 167 ~~~~s~ 172 (217)
+++...
T Consensus 94 ~v~~~~ 99 (113)
T 2gu9_A 94 NFYHPP 99 (113)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887653
No 48
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.45 E-value=6.9e-13 Score=107.71 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=69.7
Q ss_pred CCcCceEEEEEEEcCCCcCC---CCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEec-CCC
Q 027919 86 LNTLGVSLARIDYAPGGINP---PHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNN-GNV 161 (217)
Q Consensus 86 l~~~gis~~~~~l~PG~~~p---~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~-g~~ 161 (217)
..+..+.+.+++++||+..+ +|+|++ .|++||++|++++.+++ .+....+.|++||+++||++.+|++.|. +++
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 34456789999999998765 799997 99999999999999864 1111367999999999999999999999 999
Q ss_pred cEEEEEEE
Q 027919 162 PASVIAGF 169 (217)
Q Consensus 162 ~a~~l~~~ 169 (217)
++++++++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999875
No 49
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.45 E-value=2.2e-13 Score=102.14 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=63.5
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+.++.++||...++|+|+. .|++||++|++++.++ ++ .+.|++||++++|+|.+|++.|.++....++.+
T Consensus 34 ~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v 107 (114)
T 3fjs_A 34 HRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVV 107 (114)
T ss_dssp TTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEE
T ss_pred CCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 36789999999999999999997 8999999999999986 34 679999999999999999999986544444333
No 50
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.45 E-value=2.3e-13 Score=102.61 Aligned_cols=77 Identities=21% Similarity=0.392 Sum_probs=69.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
++.+.++.++||...++|+|+. .|++||++|++++.++ ++ .+.|++||++++|+|.+|.+.|.++ +++++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEE
Confidence 5689999999999999999996 9999999999999985 34 6799999999999999999999987 89999888
Q ss_pred cCCC
Q 027919 170 NSQL 173 (217)
Q Consensus 170 ~s~~ 173 (217)
....
T Consensus 113 ~p~~ 116 (126)
T 4e2g_A 113 SPPR 116 (126)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 7543
No 51
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.44 E-value=1.4e-12 Score=103.56 Aligned_cols=79 Identities=14% Similarity=0.153 Sum_probs=71.6
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+.+++++||+..++|+|+. .|++||++|++++.++ ++ .+.|++||++++|+|.+|.+.|.++++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v~---g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLVG---ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46788899999999999999996 8999999999999986 34 679999999999999999999999999999998
Q ss_pred EcCCC
Q 027919 169 FNSQL 173 (217)
Q Consensus 169 ~~s~~ 173 (217)
+....
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 87653
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.43 E-value=1.4e-12 Score=104.55 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=70.9
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
.++.+.+++++||+..++|+|+. .|++||++|++++.++ ++ .+.+++||++++|+|.+|.+.|.++++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v~---g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMVG---RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46788899999999999999996 8999999999999885 44 679999999999999999999999999999998
Q ss_pred EcCC
Q 027919 169 FNSQ 172 (217)
Q Consensus 169 ~~s~ 172 (217)
+...
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 8754
No 53
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.42 E-value=6.1e-13 Score=102.21 Aligned_cols=77 Identities=25% Similarity=0.260 Sum_probs=68.5
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
+..+.+.+++++||+..++|+|++..|++||++|++++.++ ++ .+.|++||++++|+|.+|++.|.+++++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN---GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC---CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 34567889999999988999998559999999999999986 34 67999999999999999999999999999988
Q ss_pred EE
Q 027919 168 GF 169 (217)
Q Consensus 168 ~~ 169 (217)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 54
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.40 E-value=1.2e-12 Score=97.58 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=66.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEE-EeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSK-SIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~-~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
++.+.++.+.||...++|+|+. .|++||++|++++.+++ + .+ .|++||++++|+|.+|++.|.++++++++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~---~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTLED---Q--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEETT---S--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEECC---E--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 4577889999999999999985 99999999999999863 3 45 8999999999999999999999999998887
Q ss_pred Ec
Q 027919 169 FN 170 (217)
Q Consensus 169 ~~ 170 (217)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 55
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.40 E-value=1.6e-12 Score=96.53 Aligned_cols=77 Identities=21% Similarity=0.340 Sum_probs=67.4
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+.+.+++++||...++|+|+. .|++||++|++++.++ ++ .+.|++||++++|+|.+|.+.|.+ ++++++++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRH-SQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSS-EEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECCc-ceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 4688999999999999999995 9999999999999985 44 679999999999999999999986 67888888
Q ss_pred cCCCC
Q 027919 170 NSQLQ 174 (217)
Q Consensus 170 ~s~~p 174 (217)
.+..+
T Consensus 105 ~p~~~ 109 (116)
T 2pfw_A 105 SPARE 109 (116)
T ss_dssp ESCCG
T ss_pred CCchh
Confidence 65543
No 56
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.39 E-value=3.9e-13 Score=98.88 Aligned_cols=78 Identities=17% Similarity=0.214 Sum_probs=65.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+.+.+++++||+..++|.|+...+++++++|++++... +|+.....+++||++++|+|..|+..|.|+++++++.+-
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 568999999999999999999756677778999888763 243224689999999999999999999999999999873
No 57
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.2e-12 Score=104.98 Aligned_cols=75 Identities=17% Similarity=0.088 Sum_probs=64.4
Q ss_pred ceEEEEEEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 90 GVSLARIDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 90 gis~~~~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
.+...+++++| |+..++|.|..++|++||++|++++.+++ + .++|++||+++||+|..|+++|.++++|+++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g---~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCK---N--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETT---E--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECC---E--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 35777899999 77666654445699999999999999964 4 679999999999999999999999999999987
Q ss_pred E
Q 027919 169 F 169 (217)
Q Consensus 169 ~ 169 (217)
.
T Consensus 162 q 162 (166)
T 2vpv_A 162 Q 162 (166)
T ss_dssp E
T ss_pred E
Confidence 4
No 58
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.38 E-value=3.6e-12 Score=99.68 Aligned_cols=98 Identities=19% Similarity=0.236 Sum_probs=78.7
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEE-EEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVS-KSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~-~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.++.+.+++++||...++|+|+. .|++||++|++++.+++ + . +.|++||++++|+|.+|++.|.+++++++++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~---~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERG---K--PARILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETT---S--CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECC---E--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 46789999999999999999997 99999999999999863 3 4 6899999999999999999999999999998
Q ss_pred EEcCCCCcceecchhhhcCCCCCCHHHHHHHc
Q 027919 168 GFNSQLQGTQNIALTLFASTPPVADNVLTKTF 199 (217)
Q Consensus 168 ~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af 199 (217)
+........ ..+ +. .+.++...+++
T Consensus 120 v~~~~~~~~---~~w-l~---~v~~e~~~~~~ 144 (147)
T 2f4p_A 120 ISTQVHLGP---AEW-LG---SVTEEEYRKAT 144 (147)
T ss_dssp EECCGGGCC---CEE-CC---CCCHHHHHHHH
T ss_pred EEccCCCCC---cee-cc---cCCHHHhhhcc
Confidence 876543221 122 23 46666665543
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.38 E-value=9.7e-13 Score=99.96 Aligned_cols=78 Identities=19% Similarity=0.299 Sum_probs=69.6
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
+.++++.+++++||...++|+|+. .|++||++|++++.+++ + .+.+++||++++|+|.+|++.|.+++++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLKEQ---G--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEECSS---C--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEECC---E--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 457889999999999889999995 99999999999999863 3 57999999999999999999999999999988
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
++..
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 7654
No 60
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.36 E-value=2.8e-12 Score=103.82 Aligned_cols=78 Identities=19% Similarity=0.156 Sum_probs=66.8
Q ss_pred CcCceEEEEEEEcCCCcCC--CCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEE
Q 027919 87 NTLGVSLARIDYAPGGINP--PHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPAS 164 (217)
Q Consensus 87 ~~~gis~~~~~l~PG~~~p--~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~ 164 (217)
.+..+.+.+++++||+..+ +|+|.. .|++||++|++++.++ ++ .+.|++||+++||++.+|.+.|.+++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~~-~E~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALGV-IEYIHVLEGIMKVFFD---EQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTTC-EEEEEEEESCEEEEET---TE--EEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCCC-EEEEEEEEeEEEEEEC---CE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 3456788999999998765 788874 9999999999999986 34 6799999999999999999999999999
Q ss_pred EEEEEcC
Q 027919 165 VIAGFNS 171 (217)
Q Consensus 165 ~l~~~~s 171 (217)
+++++..
T Consensus 173 ~l~v~~~ 179 (192)
T 1y9q_A 173 FQNIVAY 179 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7776644
No 61
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.36 E-value=6.6e-12 Score=94.80 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=67.6
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+.+.+++||...++|+|.. .|++||++|++++.++ ++ .+.+++||++++|+|.+|.+.|.++++++++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~-~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNE-YELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSS-EEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecCC-eEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35688889999999999999975 9999999999999986 34 679999999999999999999999999988876
Q ss_pred Ec
Q 027919 169 FN 170 (217)
Q Consensus 169 ~~ 170 (217)
+-
T Consensus 106 ~f 107 (128)
T 4i4a_A 106 WW 107 (128)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.35 E-value=5e-12 Score=93.61 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=63.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
++.+.++.++||...++|+|+. .|++||++|++++.++ ++ .+.+++||++++|+|.+|++.|.+ ++++++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITID---QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTSCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECC--CceEEEEE
Confidence 5688899999999999999996 9999999999999975 34 679999999999999999999986 57776665
Q ss_pred c
Q 027919 170 N 170 (217)
Q Consensus 170 ~ 170 (217)
-
T Consensus 111 ~ 111 (115)
T 1yhf_A 111 V 111 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.34 E-value=3.6e-12 Score=97.22 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=60.1
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s 171 (217)
.+.++.++||+..++|+|+...|++||++|++++.+++ ++ .+.|++||++++|+|.+|++.|.++ ++++++++.+
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~~~~-~~~~l~~~~p 118 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELRHSD-DLEVLEIVSP 118 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEEECT-TCEEEEEESS
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEeCCC-CeEEEEEECC
Confidence 46666667888889999997699999999999999863 24 6799999999999999999999876 4688877765
Q ss_pred CC
Q 027919 172 QL 173 (217)
Q Consensus 172 ~~ 173 (217)
..
T Consensus 119 ~~ 120 (134)
T 2o8q_A 119 AG 120 (134)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 64
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.34 E-value=3.4e-12 Score=96.34 Aligned_cols=80 Identities=14% Similarity=0.121 Sum_probs=66.9
Q ss_pred cCceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 88 TLGVSLARIDYAPGGINP-PHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p-~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
..++.+.++.++||...+ +|+|+..++++||++|++++.++ ++ .+.+++||++++|+|.+|++.|.++++++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 346678889999999888 89999733455599999999986 34 6799999999999999999999998999988
Q ss_pred EEEcCC
Q 027919 167 AGFNSQ 172 (217)
Q Consensus 167 ~~~~s~ 172 (217)
++..+.
T Consensus 98 ~i~~~~ 103 (125)
T 3cew_A 98 CIQVKA 103 (125)
T ss_dssp EEEEET
T ss_pred EEEcCC
Confidence 876543
No 65
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.33 E-value=4.6e-12 Score=106.81 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=69.7
Q ss_pred eEEEEEEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 91 VSLARIDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 91 is~~~~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
+.+..++++| |+..++|+|+. .|++||++|++++.+++ + .+.|++||++++|+|.+|.+.|.|+++++++.++
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTVEG---C--TVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEETT---E--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 4667788999 88889999996 99999999999999863 4 6789999999999999999999999999999999
Q ss_pred cCCCCc
Q 027919 170 NSQLQG 175 (217)
Q Consensus 170 ~s~~pg 175 (217)
......
T Consensus 219 ~p~~~d 224 (243)
T 3h7j_A 219 FPPRYN 224 (243)
T ss_dssp ESCSSC
T ss_pred cCChhc
Confidence 864433
No 66
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.31 E-value=4.8e-12 Score=107.68 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=66.9
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCC-CcEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGN-VPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~a~~l 166 (217)
+..+.+.+++++||+..++|+|+...|++||++|++++.+++ + .+.|++||+++||++.+|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~---~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDN---N--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSS---C--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 446788999999999999999986799999999999999863 4 6799999999999999999999999 999998
Q ss_pred EEEc
Q 027919 167 AGFN 170 (217)
Q Consensus 167 ~~~~ 170 (217)
++.+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7654
No 67
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.30 E-value=1.8e-11 Score=90.73 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=62.1
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
+.+..+.++||...++|+|+. .|++||++|++++.++ ++ .+.|++||++++|+|.+|.+.|. ++++++++..
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~~ 109 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQITL 109 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEEE
T ss_pred ceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEEE
Confidence 567778889999999999996 9999999999999986 34 67999999999999999999996 4677776653
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.27 E-value=4.2e-11 Score=102.68 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=68.3
Q ss_pred cCceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCC-CcEEE
Q 027919 88 TLGVSLARIDYAPGGINPP-HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGN-VPASV 165 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~a~~ 165 (217)
+..+.+.+++++||+..++ |+|+. .|++||++|++++.++ ++ .+.|++||+++||++.+|++.|.++ +++++
T Consensus 179 ~~~~~~~~~~l~pg~~~~~~H~H~~-~E~~yVl~G~~~~~i~---~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~ 252 (274)
T 1sef_A 179 DFDMNMHILSFEPGASHAYIETHVQ-EHGAYLISGQGMYNLD---NE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMY 252 (274)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSC-CEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEECSSSCEEE
T ss_pred CCCEEEEEEEECCCCccCcceeccC-eEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEE
Confidence 3467889999999999888 99985 9999999999999986 34 6799999999999999999999998 89988
Q ss_pred EEEEc
Q 027919 166 IAGFN 170 (217)
Q Consensus 166 l~~~~ 170 (217)
++..+
T Consensus 253 l~~~~ 257 (274)
T 1sef_A 253 VYSKD 257 (274)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87643
No 69
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.27 E-value=1.4e-11 Score=105.72 Aligned_cols=107 Identities=11% Similarity=0.043 Sum_probs=82.1
Q ss_pred CccCCCeeeeCCCCCCCccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe
Q 027919 50 NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT 129 (217)
Q Consensus 50 ~v~~~df~~~~~~~~~~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~ 129 (217)
.++++|++.+.+ |+ ..|..++.+-.... + ..+.+.+++++||+..+.|.|. .+|++||++|++++.+++
T Consensus 39 vI~~~~iv~s~l--Pg----~~~~~~~vL~sP~~-G---~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l~~ 107 (266)
T 4e2q_A 39 LITPESHVYSPL--PD----WTNTLGAYLITPAT-G---SHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTNTS 107 (266)
T ss_dssp EECGGGCCCEEC--TT----SSSEEEEEEECGGG-T---CSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC--
T ss_pred EECccceEEeeC--CC----CcCEEEEEEcCCCC-C---CcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEECC
Confidence 557788888755 43 34456666544433 2 4678999999999988888776 599999999999999862
Q ss_pred cCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCC
Q 027919 130 TANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQL 173 (217)
Q Consensus 130 ~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~ 173 (217)
++ +++|++||+++||++..|++.|. ++++++++-..-.
T Consensus 108 --g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k~y~ 145 (266)
T 4e2q_A 108 --SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFERRYE 145 (266)
T ss_dssp --CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEEECC
T ss_pred --Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEeEee
Confidence 23 67999999999999999999995 6899998854433
No 70
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.26 E-value=2.1e-11 Score=89.10 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=63.8
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEE-EEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEI-VFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
..+.+.+++++||...++|+|+...|+ +||++|++++.+++ ++ .+.|++||++++|+|..|++.|.++ ++++.
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~ 104 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLV 104 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEE
Confidence 356888999999999999999854687 89999999999751 23 6799999999999999999999864 56666
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
++..
T Consensus 105 ~~~p 108 (110)
T 2q30_A 105 TIAP 108 (110)
T ss_dssp EEES
T ss_pred EECC
Confidence 6653
No 71
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.25 E-value=5.6e-11 Score=100.52 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=68.0
Q ss_pred cCceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 88 TLGVSLARIDYAPGGINPP-HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
+..+.+.+++++||+..+. |.|. .+|.+||++|++++.++ ++ .+.|++||+++++++.+|++.|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~---~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLE---EN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEEC---CE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 5578899999999999886 5566 49999999999999986 44 6799999999999999999999999999998
Q ss_pred EEEc
Q 027919 167 AGFN 170 (217)
Q Consensus 167 ~~~~ 170 (217)
.+=+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 72
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.24 E-value=3e-11 Score=91.58 Aligned_cols=74 Identities=20% Similarity=0.228 Sum_probs=62.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+++..++++||...++|. ..+|++||++|++++.++ ++ .++|++||+++||+|..|.+.|.+ ++++++.+.
T Consensus 39 ~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 5688899999998776664 469999999999999984 44 679999999999999999998875 778888776
Q ss_pred cC
Q 027919 170 NS 171 (217)
Q Consensus 170 ~s 171 (217)
..
T Consensus 111 ~P 112 (119)
T 3lwc_A 111 YP 112 (119)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 73
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.24 E-value=5.6e-11 Score=105.56 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=65.3
Q ss_pred ceEEEEEEEcCCC-cCC--CCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 90 GVSLARIDYAPGG-INP--PHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 90 gis~~~~~l~PG~-~~p--~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
.+++. ..+.|++ ..+ +|+|++..|++||++|++++.+++.+|+...+.|++||+++||+|.+|++.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 35666 4455555 455 899996799999999999999987444445789999999999999999999998876 888
Q ss_pred EEEcCC
Q 027919 167 AGFNSQ 172 (217)
Q Consensus 167 ~~~~s~ 172 (217)
+++...
T Consensus 125 ~v~~p~ 130 (350)
T 1juh_A 125 GVIVPG 130 (350)
T ss_dssp EEEESS
T ss_pred EEEcCc
Confidence 877654
No 74
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.23 E-value=3.5e-11 Score=104.84 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=69.4
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+++.++++.||+..++|+|++..|++||++|++++.++ ++ .+.|++||++++|+|.+|.+.|.++ +++++++
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~ 117 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD---GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSY 117 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEE
Confidence 3678899999999999999999669999999999999975 44 6799999999999999999999987 6888888
Q ss_pred EcCCC
Q 027919 169 FNSQL 173 (217)
Q Consensus 169 ~~s~~ 173 (217)
+....
T Consensus 118 ~~p~~ 122 (337)
T 1y3t_A 118 TMKGN 122 (337)
T ss_dssp EETTS
T ss_pred ECCCC
Confidence 76543
No 75
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.23 E-value=2.2e-11 Score=103.61 Aligned_cols=78 Identities=10% Similarity=0.071 Sum_probs=66.9
Q ss_pred CceEEEEEEEcCCCcCCCCC-CCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHT-HPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~-Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
..+.+.+++++||+....|. |++.+|++||++|++++.++ ++ .+.|++||+++||++.+|.+.|.+++++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE---GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 35688899999998766554 45568999999999999986 34 67999999999999999999999999999999
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
+...
T Consensus 132 v~~~ 135 (261)
T 1rc6_A 132 YKRR 135 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8753
No 76
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.23 E-value=2.4e-11 Score=104.72 Aligned_cols=76 Identities=20% Similarity=0.230 Sum_probs=67.2
Q ss_pred CceEEEEEEEcCCCcC--CCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 89 LGVSLARIDYAPGGIN--PPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~--p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
..+++.+++++||+.. +.|.|. .+|++||++|++++.+++ + ++.|++||+++||+|.+|+++|.++++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g---~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQG---Q--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESS---C--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECC---E--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 4678999999999875 567787 499999999999999874 4 6799999999999999999999999999999
Q ss_pred EEEc
Q 027919 167 AGFN 170 (217)
Q Consensus 167 ~~~~ 170 (217)
++..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8874
No 77
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.21 E-value=4.3e-11 Score=100.85 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=65.4
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEE-EcCCCeEEEEecCCCcEEEEEEEc
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFV-FPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~-~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
.+.+++++||...++|+|+. .|++||++|++++.++ ++ .+.|++||+++ +|+|.+|.+.|.++++++++.+..
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r 108 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKR 108 (243)
T ss_dssp EEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEec
Confidence 67777899999999999995 9999999999999985 44 67999999995 999999999999999999988753
No 78
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.18 E-value=1.1e-10 Score=87.28 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=58.3
Q ss_pred ceEEEEEEEcCCCcCCC---CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCC-cEEE
Q 027919 90 GVSLARIDYAPGGINPP---HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNV-PASV 165 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~---H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~-~a~~ 165 (217)
++.+.++. .+|...++ |.|+ ..|++||++|++++.+++ +...+.|++||+++||+|..|++.|.+++ ++.+
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~---~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~ 104 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEG---DTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVW 104 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETT---CSSCEEECTTEEEEECTTCCEEEEEECSSSCEEE
T ss_pred CEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECC---EEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEE
Confidence 55666664 55655444 5566 499999999999999874 31016899999999999999999999876 6666
Q ss_pred EEEEc
Q 027919 166 IAGFN 170 (217)
Q Consensus 166 l~~~~ 170 (217)
++++.
T Consensus 105 l~v~~ 109 (112)
T 2opk_A 105 LAVHC 109 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 79
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.18 E-value=5.1e-11 Score=87.46 Aligned_cols=69 Identities=25% Similarity=0.349 Sum_probs=54.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..++.+.||. .++|+|++..|++||++|++++.+++ ++ .+.|++||++++|+|.+|++.|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4456677876 46999986699999999999999863 14 67999999999999999999995 45666654
No 80
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.18 E-value=4.5e-11 Score=102.51 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=66.6
Q ss_pred CceEEEEEEEcCCCcCCCCC-CCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHT-HPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~-Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
..+.+.+++++||+....|. |++.+|++||++|++++.+++ + .+.|++||+++||++.+|.++|.+++++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~---~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQ---E--THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSS---C--EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECC---E--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 45688899999998765544 455689999999999999864 4 67999999999999999999999999999998
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
+...
T Consensus 135 v~~~ 138 (274)
T 1sef_A 135 YKKR 138 (274)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8743
No 81
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.15 E-value=7.2e-11 Score=91.23 Aligned_cols=72 Identities=17% Similarity=0.105 Sum_probs=60.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+++.+++++|| ..|||...+|++||++|++++.++ ++ .+.|++||+++||+|..|.+.|. +++++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~---g~--~~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE---GE--TMIAKAGDVMFIPKGSSIEFGTP--TSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC---CE--EEEECCCcEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 568888999999 345554469999999999999985 44 67999999999999999999974 678888877
Q ss_pred cC
Q 027919 170 NS 171 (217)
Q Consensus 170 ~s 171 (217)
..
T Consensus 126 ~p 127 (133)
T 2pyt_A 126 WP 127 (133)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 82
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.15 E-value=4e-10 Score=98.12 Aligned_cols=75 Identities=20% Similarity=0.251 Sum_probs=63.3
Q ss_pred EEEEEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC
Q 027919 93 LARIDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 93 ~~~~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s 171 (217)
...+.+.| |...++|+|++..|++||++|++++.++ ++ .+.|++||++++|++.+|++.|.++ ++++++++..
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~---~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD---GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 34455655 5678899999669999999999999986 34 6799999999999999999999988 8999998865
Q ss_pred CC
Q 027919 172 QL 173 (217)
Q Consensus 172 ~~ 173 (217)
..
T Consensus 293 ~~ 294 (337)
T 1y3t_A 293 GL 294 (337)
T ss_dssp ST
T ss_pred cc
Confidence 53
No 83
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.15 E-value=8.8e-11 Score=104.54 Aligned_cols=77 Identities=19% Similarity=0.349 Sum_probs=67.5
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+....++||+..++|+|+. .|++||++|++++...+ ++ .+.+++||++++|+|.+|.+.|.++++++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~~t~v~--g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGAFTAVD--GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSCEEEET--TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEEEEEEC--CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35788999999999999999985 89999999999883332 44 679999999999999999999999999999887
Q ss_pred Ec
Q 027919 169 FN 170 (217)
Q Consensus 169 ~~ 170 (217)
.+
T Consensus 173 ~d 174 (354)
T 2d40_A 173 LD 174 (354)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 84
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.13 E-value=1.7e-10 Score=96.35 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=63.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+++.++.++||...++|+|+. .|++||++|++++.++ ++ .+.+++||++++|+|.+|++.|. .++++++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~---g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYVD---GK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 4688899999999999999996 9999999999999986 34 67999999999999999999993 4667776654
No 85
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.12 E-value=3.2e-10 Score=97.68 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=72.2
Q ss_pred cCCCCcCceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCC
Q 027919 83 IPGLNTLGVSLARIDYAPGGINPP-HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNV 161 (217)
Q Consensus 83 ~Pgl~~~gis~~~~~l~PG~~~p~-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 161 (217)
.|.-....+.+.+++++||+.++. |.|. .+|.+|||+|++++.++ ++ .+.|++||+++++.+..|.+.|.|++
T Consensus 183 ~p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~---~~--~~~v~~GD~~~~~~~~~h~~~n~g~~ 256 (278)
T 1sq4_A 183 DMSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLN---QD--WVEVEAGDFMWLRAFCPQACYSGGPG 256 (278)
T ss_dssp CTTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEET---TE--EEEEETTCEEEEEESCCEEEECCSSS
T ss_pred cCCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCCEEEEcCCCC
Confidence 454455678999999999999997 4555 58999999999999985 44 78999999999999999999999999
Q ss_pred cEEEEEEEcCC
Q 027919 162 PASVIAGFNSQ 172 (217)
Q Consensus 162 ~a~~l~~~~s~ 172 (217)
+++++.+.+..
T Consensus 257 ~~~yl~~~d~n 267 (278)
T 1sq4_A 257 RFRYLLYKDVN 267 (278)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEEcC
Confidence 99999887653
No 86
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.11 E-value=2.2e-10 Score=95.15 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=68.4
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
...+.+..+.++||...|+|.|+. +|+.||++|++++.+++ ++ .+++++||++++|+|++|..+ .+++|+..++
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e~~v~~--g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllalw 202 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHLP-EELYSVVSGRALFHLRN--AP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTLV 202 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECSS-EEEEEEEEECEEEEETT--SC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCCC-ceEEEEEeCCEEEEECC--CC--EEecCCCCEEEcCCCCceeEE-ECCccEEEEE
Confidence 345788899999999999999995 99999999999999873 34 569999999999999999998 4889998888
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
+...
T Consensus 203 vW~G 206 (217)
T 4b29_A 203 LWRG 206 (217)
T ss_dssp EEES
T ss_pred EEeC
Confidence 7754
No 87
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.09 E-value=3.9e-10 Score=94.08 Aligned_cols=74 Identities=8% Similarity=-0.005 Sum_probs=65.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
+..+.++.+.||...++|.|++ +|++||++|++++.+++ + ++.|++||++++|+|.+|.+.|. ++++++.+.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i~~---~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFIEN---N--KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEESS---C--EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEECC---E--EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 4578899999999999999996 99999999999999864 3 67999999999999999999986 478888875
Q ss_pred cC
Q 027919 170 NS 171 (217)
Q Consensus 170 ~s 171 (217)
..
T Consensus 108 ~~ 109 (227)
T 3rns_A 108 EK 109 (227)
T ss_dssp EC
T ss_pred ee
Confidence 44
No 88
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.07 E-value=5.5e-10 Score=80.36 Aligned_cols=60 Identities=25% Similarity=0.452 Sum_probs=50.4
Q ss_pred CcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 102 GINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 102 ~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
+..++|+|++..|++||++|++++.+++ + .+.+++||++++|+|..|++.|.+ +++++.+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRD---Q--NITLQAGEMYVIPKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSS---C--EEEEETTEEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECC---E--EEEEcCCCEEEECCCCeEeeEcCC--CCEEEEE
Confidence 4588999997699999999999999763 3 679999999999999999999973 5555543
No 89
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.05 E-value=4.2e-10 Score=100.59 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=68.0
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEE-EEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLD-VGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~-~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
..+.+....++||+..++|.|.. +|+.||++|++. +.++ |+ ...+++||++++|+|..|.+.|.|+++++++.
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~vd---G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVVN---GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEEC---CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 46788999999999999999986 899999999996 5443 54 67999999999999999999999999999998
Q ss_pred EEcC
Q 027919 168 GFNS 171 (217)
Q Consensus 168 ~~~s 171 (217)
+.+.
T Consensus 175 v~D~ 178 (368)
T 3nw4_A 175 GLDI 178 (368)
T ss_dssp EECH
T ss_pred ecch
Confidence 7643
No 90
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.05 E-value=1.1e-09 Score=86.60 Aligned_cols=73 Identities=18% Similarity=0.094 Sum_probs=58.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+++..+++. ++. .|||...+|+.||++|++++.++ |+ .+.|++||+++||+|..|++.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~---g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID---GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 4567777776 443 34555569999999999999974 44 67999999999999999999997 688888887
Q ss_pred cCC
Q 027919 170 NSQ 172 (217)
Q Consensus 170 ~s~ 172 (217)
.+.
T Consensus 135 ~P~ 137 (151)
T 4axo_A 135 YPA 137 (151)
T ss_dssp ECS
T ss_pred CCC
Confidence 653
No 91
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.05 E-value=1.2e-09 Score=97.20 Aligned_cols=90 Identities=14% Similarity=-0.013 Sum_probs=73.0
Q ss_pred CCceEEEEec-CCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcC
Q 027919 71 FGSTVTAANV-QTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPR 149 (217)
Q Consensus 71 ~g~~v~~~~~-~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 149 (217)
.|+.+..++. .+.+.+.+. ++....++||+..++|+|+. .|+.||++|++++.++ ++ +..+++||++++|+
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPT 320 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET---TE--EEEEETTCEEEECT
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECC
Confidence 4566666663 356666655 55567999999999999997 6999999999999995 44 67999999999999
Q ss_pred CCeEEEEecCCCcEEEEEEEc
Q 027919 150 GLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 150 g~~H~~~N~g~~~a~~l~~~~ 170 (217)
+..|++.|. ++++++++.+
T Consensus 321 ~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 321 WHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TCCEEEEEE--EEEEEEEEES
T ss_pred CCeEEEEeC--CCEEEEEEcC
Confidence 999999994 7788887743
No 92
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.04 E-value=2.2e-09 Score=96.75 Aligned_cols=77 Identities=18% Similarity=0.060 Sum_probs=67.8
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecC-CCcEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNG-NVPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~a~~l 166 (217)
...+.+....++||+..++|.|.. .|++||++|+.++.++ |+ .+.+++||++++|+|..|.+.|.| +++++++
T Consensus 291 ~~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll 364 (394)
T 3bu7_A 291 MLTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLF 364 (394)
T ss_dssp SSSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEE
T ss_pred CCeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEE
Confidence 345678889999999999999996 8999999999988875 44 679999999999999999999998 7999988
Q ss_pred EEEc
Q 027919 167 AGFN 170 (217)
Q Consensus 167 ~~~~ 170 (217)
++.+
T Consensus 365 ~i~D 368 (394)
T 3bu7_A 365 SFND 368 (394)
T ss_dssp EEES
T ss_pred EeeC
Confidence 8743
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.04 E-value=1e-09 Score=99.02 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=68.7
Q ss_pred cCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEe-cCCCcEEEE
Q 027919 88 TLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKN-NGNVPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N-~g~~~a~~l 166 (217)
+..+.+....++||...++|.|.. .|+.||++|+..+..+ +|+ ...+++||++++|+|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 456788999999999999999996 7999999999977444 255 6799999999999999999999 999999999
Q ss_pred EEEc
Q 027919 167 AGFN 170 (217)
Q Consensus 167 ~~~~ 170 (217)
++.+
T Consensus 195 ~v~d 198 (394)
T 3bu7_A 195 DGLD 198 (394)
T ss_dssp EEEC
T ss_pred Eccc
Confidence 8653
No 94
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.04 E-value=4.4e-10 Score=89.24 Aligned_cols=71 Identities=20% Similarity=0.167 Sum_probs=58.5
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEe--cEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLE--GQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~--G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
+++.++++ +...++|||+...|++||++ |++++.++ |+ .+.+++||++++|+|..|++.+ +++++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id---ge--~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I 115 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN---GQ--SYPLTKLLAISIPPLVRHRIVG----EATIINI 115 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET---TE--EEECCTTEEEEECTTCCEEEES----CEEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC---CE--EEEeCCCCEEEECCCCeEeeEC----CEEEEEE
Confidence 35555555 44568999987789999999 99999986 44 6799999999999999999973 7999998
Q ss_pred EcCC
Q 027919 169 FNSQ 172 (217)
Q Consensus 169 ~~s~ 172 (217)
+.+.
T Consensus 116 ~~Pp 119 (157)
T 4h7l_A 116 VSPP 119 (157)
T ss_dssp EESS
T ss_pred ECCC
Confidence 7654
No 95
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.03 E-value=2.1e-09 Score=92.24 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=67.3
Q ss_pred cCceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 88 TLGVSLARIDYAPGGINPP-HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 88 ~~gis~~~~~l~PG~~~p~-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
+..+.+.+++++||+.++. |+|.. +|.+|||+|++.+.++ ++ .+.+++||+++++++.+|++.|.|++++++|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~-eh~~~vL~G~g~y~l~---~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYN-QHGLLLLEGQGIYRLG---DN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSC-CEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEccc-ceEEEEEeceEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 5577889999999999996 77764 8999999999999986 34 6799999999999999999999999999998
Q ss_pred EEE
Q 027919 167 AGF 169 (217)
Q Consensus 167 ~~~ 169 (217)
..=
T Consensus 257 ~yk 259 (266)
T 4e2q_A 257 LYK 259 (266)
T ss_dssp EEE
T ss_pred EEc
Confidence 643
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.99 E-value=4.7e-09 Score=85.85 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=68.3
Q ss_pred EEEEEEEcCCC----------cCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCC
Q 027919 92 SLARIDYAPGG----------INPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNV 161 (217)
Q Consensus 92 s~~~~~l~PG~----------~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 161 (217)
+...+.+.|+. ..++|+|+. .|++||++|++.+.+.+.+++.+...+++||++++|+|+.|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 45566777775 238999997 9999999999999998754555567999999999999999999987777
Q ss_pred cEEEEEEEcCCCCccee
Q 027919 162 PASVIAGFNSQLQGTQN 178 (217)
Q Consensus 162 ~a~~l~~~~s~~pg~~~ 178 (217)
..+.+-+|.. .|+...
T Consensus 154 ~~~airlF~~-~~~W~~ 169 (191)
T 1vr3_A 154 YVKAMRLFVG-EPVWTP 169 (191)
T ss_dssp CEEEEEEESS-SCCCCC
T ss_pred CEEEEEEECC-CCCccC
Confidence 7778777765 455543
No 97
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.93 E-value=2.6e-09 Score=90.24 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=63.0
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+.+++++||+....|. .+|++||++|++++.+++ + .+.|++||+++||++.+|++.|. ++++++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~---~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGG---E--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSS---C--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 35688899999999877774 599999999999999864 4 67999999999999999999998 78888887
Q ss_pred EcC
Q 027919 169 FNS 171 (217)
Q Consensus 169 ~~s 171 (217)
...
T Consensus 118 ~~~ 120 (246)
T 1sfn_A 118 EKP 120 (246)
T ss_dssp EEC
T ss_pred Eee
Confidence 644
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.89 E-value=2.5e-09 Score=78.77 Aligned_cols=63 Identities=22% Similarity=0.212 Sum_probs=50.2
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEE
Q 027919 95 RIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPAS 164 (217)
Q Consensus 95 ~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~ 164 (217)
..+..||.. ++| |+. .|++||++|++++.+++ ++ .+.|++||+++||+|.+|.+.|.++....
T Consensus 35 ~~~~~pg~~-~~h-H~~-~E~~~Vl~G~~~~~i~~--g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDT-NETCYILEGKVEVTTED--GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-CSS-CEEEEEEEEEEEEEETT--CC--EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCc-eEEEEEEeCEEEEEECC--CC--EEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 456777753 356 774 99999999999999852 34 67999999999999999999998654433
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=9.4e-09 Score=81.72 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcC
Q 027919 70 TFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPR 149 (217)
Q Consensus 70 ~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 149 (217)
..|.++..+... +. .+..+.+++++||+..+.|+|++ .|.+|||+|++.+. +.+ .++++||.++.|+
T Consensus 26 ~~Gv~~~~L~~d--~~---~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~ 92 (159)
T 3ebr_A 26 SNDVMVKYFKID--PV---RGETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRYK---EHD----WVAHAGSVVYETA 92 (159)
T ss_dssp CSSSEEEEEEEE--TT---TTEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEET---TSS----CCBCTTCEEEECS
T ss_pred CCCEEEEEeeEc--CC---CCeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEe---CCC----eEECCCeEEEECC
Confidence 346677666422 11 24578889999999999999997 88899999998863 223 3799999999999
Q ss_pred CCeEEEEec--CCCcEEEEEEEc
Q 027919 150 GLVHFQKNN--GNVPASVIAGFN 170 (217)
Q Consensus 150 g~~H~~~N~--g~~~a~~l~~~~ 170 (217)
|..|...+. +++.++++.+..
T Consensus 93 g~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 93 STRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp SEEECEEESSSSSSCEEEEEEEE
T ss_pred CCcceeEeCCCCCCCEEEEEEec
Confidence 999999998 778998887544
No 100
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.85 E-value=1.2e-08 Score=83.45 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=60.2
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
.+..++++||+..|.|+|++ .|+.||++|++. ++ ...+++||.+++|+|..|...+.+++.+.++++.+
T Consensus 126 ~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 126 IARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp EEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred EEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 56789999999999999986 899999999965 32 23799999999999999999988788999988764
No 101
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.82 E-value=5.9e-09 Score=79.45 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=56.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+++...+..||... +|.|.. +|++||++|++++.+. +|+ .++|++||+++||+|..|.+.|.++.. ++++++
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r-K~yv~~ 120 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK-KIYFVT 120 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECCcee-EEEEEE
Confidence 467778888888644 577764 8999999999999973 244 679999999999999999999986433 344443
No 102
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.81 E-value=4.3e-08 Score=78.61 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=55.4
Q ss_pred CcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecC
Q 027919 87 NTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNG 159 (217)
Q Consensus 87 ~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g 159 (217)
|+..+.++. .-.|++...+|.|+. +|++||++|++++.+.+ .|+....+|++||++++|+|++|+-...+
T Consensus 32 nd~~~~V~~-v~Gpn~r~d~H~h~~-dE~FyvlkG~m~i~v~d-~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 32 QDSDFIVTV-VGGPNHRTDYHDDPL-EEFFYQLRGNAYLNLWV-DGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SSCSEEEEE-ECSCBCCCCEEECSS-CEEEEEEESCEEEEEEE-TTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCcEEEEE-EcCCCcCccCcCCCC-ceEEEEEeeEEEEEEEc-CCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 334444443 346778899998875 99999999999999986 35456789999999999999999876643
No 103
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.75 E-value=2e-07 Score=74.88 Aligned_cols=87 Identities=20% Similarity=0.310 Sum_probs=73.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEec-CCe---EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTT-ANV---LVSKSIKKGENFVFPRGLVHFQKNNGNVPASV 165 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~-~~~---~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~ 165 (217)
++++..+...||...++|-|.++..++.|++|+++..+-.. +++ .....+++||++++|++.+|++.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 56888999999999999999987889999999998765421 221 13578999999999999999999999999999
Q ss_pred EEEEcCCCCcc
Q 027919 166 IAGFNSQLQGT 176 (217)
Q Consensus 166 l~~~~s~~pg~ 176 (217)
+-++.....+.
T Consensus 148 lHvY~pp~~~~ 158 (171)
T 3eqe_A 148 LHVYSPPLEDM 158 (171)
T ss_dssp EEEEESCCCCC
T ss_pred EEEeCCCcccc
Confidence 99998776543
No 104
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.74 E-value=3.8e-09 Score=82.49 Aligned_cols=91 Identities=16% Similarity=0.063 Sum_probs=65.8
Q ss_pred CCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC
Q 027919 71 FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG 150 (217)
Q Consensus 71 ~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 150 (217)
.|..+..+.... . .|-.+.+++++||+..+.|+|++ .|.+|||+|+++...++ ....+++++||.++.|+|
T Consensus 29 ~Gv~~~~L~~~~--~---~g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g~---~~~~~~~~~Gd~~~~p~g 99 (145)
T 2o1q_A 29 GGIRWKLLHVSP--E---MGSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGGK---AAGGDTAIAPGYGYESAN 99 (145)
T ss_dssp SCCEEEEEEEET--T---TTEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTCG---GGTSEEEESSEEEEECTT
T ss_pred CCcEEEEeeECC--C---cccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCCC---EecceEeCCCEEEEECcC
Confidence 456666664222 1 13357789999999999999997 67799999999965322 100268999999999999
Q ss_pred CeEE-EEecCCCcEEEEEEEcCC
Q 027919 151 LVHF-QKNNGNVPASVIAGFNSQ 172 (217)
Q Consensus 151 ~~H~-~~N~g~~~a~~l~~~~s~ 172 (217)
..|. ..+ .+.+.++.+++..
T Consensus 100 ~~H~p~~~--~e~~~~l~~~~gp 120 (145)
T 2o1q_A 100 ARHDKTEF--PVASEFYMSFLGP 120 (145)
T ss_dssp CEESCCEE--EEEEEEEEEEESC
T ss_pred CccCCeEC--CCCeEEEEEECCc
Confidence 9998 443 3557777776644
No 105
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.73 E-value=6e-08 Score=85.96 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=63.1
Q ss_pred CcCceEEEEEEEcCC---CcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcE
Q 027919 87 NTLGVSLARIDYAPG---GINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPA 163 (217)
Q Consensus 87 ~~~gis~~~~~l~PG---~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a 163 (217)
+...+++.++++.++ +..+.|.|+. +|++||++|++++.+++ .+ .++|++||++++|+|.+|.+.|.++. +
T Consensus 245 ~~~~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i~g--~~--~~~l~~Gd~~~iPag~~h~~~~~~~~-~ 318 (350)
T 1juh_A 245 QDTNYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQIGD--YA--ATELGSGDVAFIPGGVEFKYYSEAYF-S 318 (350)
T ss_dssp GGGCEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEETT--SC--CEEECTTCEEEECTTCCEEEEESSSS-E
T ss_pred ceeEEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEECC--eE--EEEeCCCCEEEECCCCCEEEEecCCe-E
Confidence 333468888888884 4678899986 99999999999999974 13 57999999999999999999998654 6
Q ss_pred EEEEEEc
Q 027919 164 SVIAGFN 170 (217)
Q Consensus 164 ~~l~~~~ 170 (217)
.++.+.+
T Consensus 319 ~~l~~~~ 325 (350)
T 1juh_A 319 KVLFVSS 325 (350)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6666655
No 106
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.72 E-value=4.3e-08 Score=79.03 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=62.7
Q ss_pred eEEEEEEEcCCCcCCCCCCCC------CcEEEEEEecEEEEEEEecCC----------------eEEEEEeCCCCEEEEc
Q 027919 91 VSLARIDYAPGGINPPHTHPR------ATEIVFVLEGQLDVGFFTTAN----------------VLVSKSIKKGENFVFP 148 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~------a~Ei~yVl~G~~~~~~~~~~~----------------~~~~~~L~~GD~~~~P 148 (217)
....++.+.||...|.|.|+. -.|-++|++|.+++.+.++.- -.....|+|||++.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 567789999999999999997 789999999999998854210 0024699999999999
Q ss_pred CCCeEEEEecCCCcEEEEEEEcCCC
Q 027919 149 RGLVHFQKNNGNVPASVIAGFNSQL 173 (217)
Q Consensus 149 ~g~~H~~~N~g~~~a~~l~~~~s~~ 173 (217)
+|.+|+++| +.+. .++.-+++.+
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 999999999 3333 5555555443
No 107
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.72 E-value=8.9e-09 Score=83.43 Aligned_cols=70 Identities=19% Similarity=0.220 Sum_probs=56.7
Q ss_pred CCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcc
Q 027919 104 NPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGT 176 (217)
Q Consensus 104 ~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~ 176 (217)
.++|+|+. .|+.||++|++.+.+. .+++.+...+++||++++|+|+.|++.+..+...+.+-+|... |+.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 57899997 9999999999999885 2356556779999999999999999888666667777777654 554
No 108
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.68 E-value=2.6e-08 Score=79.63 Aligned_cols=87 Identities=21% Similarity=0.262 Sum_probs=65.8
Q ss_pred CceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCC
Q 027919 72 GSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGL 151 (217)
Q Consensus 72 g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~ 151 (217)
|..+..+... +. .+..+.+++++||+..+.|+|++ .|.+|||+|++... . +. .+.+++||.++.|+|.
T Consensus 29 GV~~~~L~~~--~~---~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~---~-~~--~~~~~aGd~~~~P~g~ 96 (165)
T 3cjx_A 29 GTDIFPLFMD--PY---NGLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT---E-YP--GQKQTAGCYLYEPGGS 96 (165)
T ss_dssp TEEEEEEEEE--TT---TTEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET---T-CT--TSCEETTEEEEECTTC
T ss_pred CEEEEEeEeC--CC---CCcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC---C-Cc--eEEECCCeEEEeCCCC
Confidence 6666655322 22 24568899999999999999997 89999999999863 1 11 2368999999999999
Q ss_pred eEEEEecC--CCcEEEEEEEc
Q 027919 152 VHFQKNNG--NVPASVIAGFN 170 (217)
Q Consensus 152 ~H~~~N~g--~~~a~~l~~~~ 170 (217)
.|...+.. +++|..+++..
T Consensus 97 ~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 97 IHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp EECEECCTTCSSCEEEEEEEE
T ss_pred ceeeEeCCCCCCCcEEEEEEe
Confidence 99998864 34786666544
No 109
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.56 E-value=2.2e-07 Score=81.36 Aligned_cols=83 Identities=22% Similarity=0.212 Sum_probs=66.1
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC-CeEEEEEeCC-C---CEEEEcCCCeEEEEecCCCcEEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NVLVSKSIKK-G---ENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~L~~-G---D~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
.....+..||....+|||....|.++|++|++.+.+.+.. ++ ...+.. | +.+++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 3455678999999999999889999999999999776543 44 445666 7 999999999999999998899887
Q ss_pred EE----EcCCCCcc
Q 027919 167 AG----FNSQLQGT 176 (217)
Q Consensus 167 ~~----~~s~~pg~ 176 (217)
.. |+.++|.+
T Consensus 351 ~~~~~~y~~~~~d~ 364 (369)
T 3st7_A 351 MWVNEMFDPNQPDT 364 (369)
T ss_dssp EEESSCCCSSSCCC
T ss_pred EecCcccCCCCCcc
Confidence 64 34445544
No 110
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.51 E-value=1.4e-07 Score=74.43 Aligned_cols=107 Identities=15% Similarity=0.024 Sum_probs=74.0
Q ss_pred CccCCCeeeeCCCCCCCccC-CCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEE
Q 027919 50 NFSEMDFFSDKLAKPAATNN-TFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFF 128 (217)
Q Consensus 50 ~v~~~df~~~~~~~~~~~~~-~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~ 128 (217)
.|..+|..|. |.+... +.|..+..+... |. .|....+++++||+..++|+|++ .|.+|||+|++....+
T Consensus 13 ~v~~d~~~W~----p~P~~l~~~Gv~~k~L~~~--~e---~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~G 82 (153)
T 3bal_A 13 YVKISDNNYV----PFPEAFSDGGITWQLLHSS--PE---TSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRGG 82 (153)
T ss_dssp EEECCGGGCE----ECCGGGEESCCEEEEEEEE--TT---TTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETTC
T ss_pred EEccccCcee----cCCCccCCCCeEEEEEEEC--Cc---cceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecCc
Confidence 4556777675 221111 457788877433 32 35688899999999999999997 8889999999987643
Q ss_pred ecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc
Q 027919 129 TTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 129 ~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
+.. + ...+++|+.++-|+|..|..... ++..+++.+..
T Consensus 83 d~~-~--~~~~~aGsYv~ePpGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 83 EQE-G--GSTAYAPSYGFESSGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp GGG-T--SEEEESSEEEEECTTCEESCCEE-SSCEEEEEEEE
T ss_pred ccc-C--ccccCCCeEEEcCCCCcccceeC-CCCeEEEEEEE
Confidence 211 1 35789999999999999974332 23444444433
No 111
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.51 E-value=9.6e-07 Score=64.04 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=60.1
Q ss_pred EEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE-cCCCCcceecc---hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 135 VSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF-NSQLQGTQNIA---LTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 135 ~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
+...|++||+++||+|.+-...+.. ...+++.- +.+++....++ .+++. .||.++|+.+|+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~---~l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT---TSCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH---hCCHHHHHHHcCCCHHHHHHHH
Confidence 4568999999999999999888874 47777763 44477777775 47777 6999999999999999999998
Q ss_pred hh
Q 027919 211 SR 212 (217)
Q Consensus 211 ~~ 212 (217)
..
T Consensus 81 ~~ 82 (93)
T 1dgw_Y 81 EN 82 (93)
T ss_dssp TS
T ss_pred hc
Confidence 64
No 112
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.49 E-value=2.1e-06 Score=70.98 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=68.4
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe--cCCeE----EEEEeCCCCEEEEcC--CCeEEEEec-CC
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT--TANVL----VSKSIKKGENFVFPR--GLVHFQKNN-GN 160 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~--~~~~~----~~~~L~~GD~~~~P~--g~~H~~~N~-g~ 160 (217)
.+++..+...||...++|-|.. ..+++|++|+++..+-. .+|+. ...++++||++++++ |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4688899999999999999997 99999999999876632 11211 257899999999999 999999998 68
Q ss_pred CcEEEEEEEcCC
Q 027919 161 VPASVIAGFNSQ 172 (217)
Q Consensus 161 ~~a~~l~~~~s~ 172 (217)
++++.|-+|...
T Consensus 157 ~~avsLHvY~~~ 168 (208)
T 2gm6_A 157 RVSISIHVYGAN 168 (208)
T ss_dssp SCEEEEEEESSC
T ss_pred CcEEEEEEEcCC
Confidence 899999888653
No 113
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.48 E-value=6.9e-07 Score=79.77 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=62.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
-|.+....++||...++|.|.. +++++|++|+.++.+++ + +..+++||+|++|++..|...|. +++.++++-
T Consensus 278 ti~~~~~~L~pG~~t~~hRht~-s~Vy~V~eG~G~~~I~~---~--~~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 278 TLRCEFHRLRAGTETATRNEVG-STVFQVFEGAGAVVMNG---E--TTKLEKGDMFVVPSWVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp SCEEEEEEECTTCBCCCEEESS-CEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCEEEEES--SSEEEEEEE
T ss_pred hHHhheEEECCCCccCCeeccc-cEEEEEEeCcEEEEECC---E--EEEecCCCEEEECCCCcEEEEeC--CCEEEEEEe
Confidence 3466678899999999999996 89999999999999863 4 67999999999999999999996 678777664
No 114
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.45 E-value=1.1e-06 Score=70.37 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=54.6
Q ss_pred EcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC----eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcCC
Q 027919 98 YAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN----VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQ 172 (217)
Q Consensus 98 l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~----~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~ 172 (217)
-.|+....+|.|+ .+|++|+++|++.+.+.+. | +.....|++||++++|+|++|+-... +..+.+.+=...
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~--~e~v~lviErkR 115 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF--ADTVGIVVEQDR 115 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC--TTCEEEEEEECC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc--CCcEEEEEEecC
Confidence 3566778999777 4999999999999999873 4 44578999999999999999987654 344444443333
No 115
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.44 E-value=6.5e-07 Score=69.32 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=58.3
Q ss_pred EEEEEEEcCC----CcCCCCCCCCCcEEEEEEecEEEEEEEecC---CeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEE
Q 027919 92 SLARIDYAPG----GINPPHTHPRATEIVFVLEGQLDVGFFTTA---NVLVSKSIKKGENFVFPRGLVHFQKNNGNVPAS 164 (217)
Q Consensus 92 s~~~~~l~PG----~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~---~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~ 164 (217)
.++...+.|. +...+|.|+..+|+++|++|++++.+.+.. .+.....|++|+++++|+|+.|.-... +.++
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~ 103 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTK 103 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCE
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceE
Confidence 4455555554 445689999999999999999999998421 013467999999999999999988874 4566
Q ss_pred EEEEEcC
Q 027919 165 VIAGFNS 171 (217)
Q Consensus 165 ~l~~~~s 171 (217)
++.+=.+
T Consensus 104 vLLiEp~ 110 (140)
T 3d0j_A 104 MMYVQDS 110 (140)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 6655433
No 116
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.44 E-value=1.9e-06 Score=66.44 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=49.6
Q ss_pred CCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCC-CcEEEEEEE
Q 027919 105 PPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGN-VPASVIAGF 169 (217)
Q Consensus 105 p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~a~~l~~~ 169 (217)
.+|.|+. .|++||++|++++.++ ++ .+.+++||++++|+|.+|.+.+.++ ++.+.+++.
T Consensus 32 ~p~~h~~-~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 32 RPLGMKG-YILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp ETTCCSS-EEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred cccCCCc-eEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 4899986 9999999999999986 44 6799999999999999999988763 666666554
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.44 E-value=5.6e-07 Score=75.18 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=67.0
Q ss_pred CCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC
Q 027919 71 FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG 150 (217)
Q Consensus 71 ~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 150 (217)
.|.+...+... +. ..+....+++++||...|.|+|++ .|.+|||+|++. ++ + ..+.+||.++.|+|
T Consensus 27 ~Gv~~~~L~~~--~~--e~g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g 92 (223)
T 3o14_A 27 KGVERRMLDRI--GG--EVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPT 92 (223)
T ss_dssp TTEEEEEEEEE--SS--SSCEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----ET-T----EEEETTEEEEECTT
T ss_pred CCEEEEEeecC--CC--ccccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----EC-C----eEECCCeEEEeCCC
Confidence 45666666432 22 124456789999999999999997 888999999976 21 2 37999999999999
Q ss_pred CeEEEEecCCCcEEEEEEEcCCCCc
Q 027919 151 LVHFQKNNGNVPASVIAGFNSQLQG 175 (217)
Q Consensus 151 ~~H~~~N~g~~~a~~l~~~~s~~pg 175 (217)
..|.... ++.|.+++.+..-+++
T Consensus 93 ~~H~p~a--~~gc~~~vk~~~~~~~ 115 (223)
T 3o14_A 93 TSHVPGS--AEGCTIFVKLWQFDPA 115 (223)
T ss_dssp CEECCEE--SSCEEEEEEESCSCTT
T ss_pred CccccEe--CCCCEEEEEecCCCCC
Confidence 9998776 5778888877554443
No 118
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.37 E-value=7.5e-06 Score=67.22 Aligned_cols=86 Identities=14% Similarity=0.174 Sum_probs=71.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEec--C-----CeEEEEEeCCCCEEEE-cCCCeEEEEecC-C
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTT--A-----NVLVSKSIKKGENFVF-PRGLVHFQKNNG-N 160 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~--~-----~~~~~~~L~~GD~~~~-P~g~~H~~~N~g-~ 160 (217)
.+++..+...||...++|-|.++..+++|++|+++-..-+- . ......++++||+.++ |++-+|++.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 36888899999999999999988999999999999876321 1 1223679999999999 888899999998 7
Q ss_pred CcEEEEEEEcCCCCc
Q 027919 161 VPASVIAGFNSQLQG 175 (217)
Q Consensus 161 ~~a~~l~~~~s~~pg 175 (217)
++++-|=+|.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899988888876554
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.28 E-value=2.6e-06 Score=73.01 Aligned_cols=68 Identities=18% Similarity=0.258 Sum_probs=55.0
Q ss_pred cCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc
Q 027919 99 APGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
.|+....+| |...+|++|+++|.+.+.+.+ +|+.....|++||++++|+|++|+-... +.++.+.+=.
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~--~et~gLviE~ 106 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRF--ANTVGLVVER 106 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEEC--TTCEEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCccc--CCeEEEEEee
Confidence 455668899 888899999999999999987 4656678999999999999999987764 3455555433
No 120
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.20 E-value=1.6e-05 Score=61.88 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=67.5
Q ss_pred CceEEEEec-CCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCC-EEEEcC
Q 027919 72 GSTVTAANV-QTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGE-NFVFPR 149 (217)
Q Consensus 72 g~~v~~~~~-~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD-~~~~P~ 149 (217)
.+.++.+.. ..+|.-- .. .....+.+||....+|.|....|++++++|++.+.+.+. ....+..|.... .+.+|+
T Consensus 17 RG~L~~~e~~~~ipf~i-kR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg-~~~~~~~L~~~~~gL~Ipp 93 (141)
T 2pa7_A 17 RGSLVAIEENKNIPFSI-KR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG-NIIQEITLDSPAVGLYVGP 93 (141)
T ss_dssp TEEEEEEETTTTSSSCC-CE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS-SCEEEEEECCTTEEEEECT
T ss_pred CCcEEEEeccCCCCCCc-cE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC-cEEEEEEECCCCcEEEeCC
Confidence 457777765 4455421 11 223344568888999999999999999999999999752 223456777665 588999
Q ss_pred CCeEEEEecCCCcEEEEEEEc
Q 027919 150 GLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 150 g~~H~~~N~g~~~a~~l~~~~ 170 (217)
|++|.+.+.++. ++++.+-+
T Consensus 94 gvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 94 AVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp TCEEEEECCCTT-CEEEEEES
T ss_pred CEEEEEEEcCCC-eEEEEECC
Confidence 999999999765 66655433
No 121
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.99 E-value=5.5e-05 Score=63.68 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=54.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
++++..+.+ .|.... -.++. +|++||++|++++... |+ ..++++||+++||+|..|.+...+.- -.+++++
T Consensus 46 ~~~~G~~~~-~g~~~v-~~~p~-dE~~~VleG~~~lt~~---g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSV-EAYPY-TEMLVMHRGSVTLTSG---TD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEE-SSCSS-EEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEEEE
T ss_pred CeEEEEEEe-cccccc-ccCCC-cEEEEEEEeEEEEECC---Ce--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEEec
Confidence 578888888 554432 22443 8999999999999862 54 77999999999999999999987543 4455666
Q ss_pred c
Q 027919 170 N 170 (217)
Q Consensus 170 ~ 170 (217)
.
T Consensus 117 ~ 117 (238)
T 3myx_A 117 T 117 (238)
T ss_dssp C
T ss_pred c
Confidence 6
No 122
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.98 E-value=0.00015 Score=59.85 Aligned_cols=83 Identities=18% Similarity=0.241 Sum_probs=67.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe--cCCeE----EEEEeCCCCEEEEcCC--CeEEEEecC-C
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT--TANVL----VSKSIKKGENFVFPRG--LVHFQKNNG-N 160 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~--~~~~~----~~~~L~~GD~~~~P~g--~~H~~~N~g-~ 160 (217)
.+++..+...||...++|-|. +.-++.|++|+++-.+-. .+++. ...++++||+.+|.++ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 467888999999999999999 799999999999876532 12221 1368999999999987 899999984 7
Q ss_pred CcEEEEEEEcCCC
Q 027919 161 VPASVIAGFNSQL 173 (217)
Q Consensus 161 ~~a~~l~~~~s~~ 173 (217)
++++-|=+|....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8898888877654
No 123
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.67 E-value=8.5e-05 Score=55.84 Aligned_cols=62 Identities=18% Similarity=0.058 Sum_probs=47.1
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEec
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNN 158 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 158 (217)
.....-+..||... ++.+.. .|++|||+|++++...+ |+ ..++++||+++||+|....+.-.
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~~-~E~~~iLeG~~~lt~dd--G~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRDL-EETFVVVEGEALYSQAD--AD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCSE-EEEEEEEECCEEEEETT--CC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeE-CeeCCC-cEEEEEEEeEEEEEeCC--Ce--EEEECCCCEEEECCCCeEEEEEe
Confidence 34555578888643 333432 59999999999998753 54 67999999999999999888754
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.64 E-value=0.00038 Score=55.87 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=58.6
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC------CeEEEEEeC---CCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 97 DYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA------NVLVSKSIK---KGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 97 ~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~------~~~~~~~L~---~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
...+|....+|+|....++++|++|++...+++-. |+.....|. ....+++|+|..|.+.|.+++++.++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 34788888999998779999999999999887521 345677887 567999999999999999886676654
Q ss_pred E
Q 027919 168 G 168 (217)
Q Consensus 168 ~ 168 (217)
.
T Consensus 139 ~ 139 (174)
T 3ejk_A 139 C 139 (174)
T ss_dssp E
T ss_pred E
Confidence 4
No 125
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.54 E-value=0.0019 Score=51.50 Aligned_cols=132 Identities=17% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCCCceEEEEecCCcC-CCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecE-EEEEEEecCCeEEEEE----eCCC
Q 027919 69 NTFGSTVTAANVQTIP-GLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQ-LDVGFFTTANVLVSKS----IKKG 142 (217)
Q Consensus 69 ~~~g~~v~~~~~~~~P-gl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~----L~~G 142 (217)
.|.|+..++.....-+ +-.....+....-+.+|....+|... ++|+++...|. +++.+..++|+....+ +.+|
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 5678888877765411 11222346777778999887788875 79999999998 5888877777655445 5678
Q ss_pred CE--EEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 143 EN--FVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 143 D~--~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
+. ++||+|.++..++.+.+.+.+-++. .||+..-...+ .+.+-|.+.|.--++.|++|-
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp EESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTSC
T ss_pred ceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE------cCHHHHHhHCchhHHHHHHhh
Confidence 88 9999999999998732544444444 45553322111 345566666666666666553
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.54 E-value=0.00025 Score=59.46 Aligned_cols=74 Identities=9% Similarity=-0.012 Sum_probs=54.4
Q ss_pred ceEEEEEEEcCCCc--CCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEec--CCCcEEE
Q 027919 90 GVSLARIDYAPGGI--NPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNN--GNVPASV 165 (217)
Q Consensus 90 gis~~~~~l~PG~~--~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~--g~~~a~~ 165 (217)
++.+...++..... .++|+|.. -|++||++|++. .+++ +....+.+++||++++|+|.+|.+... ++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~G~~~-~i~~--~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIND-YKMFWIDSGIAK-LIDK--NCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECSS-CEEEEESSSCEE-EEET--TTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhcccchhccHhhhcc-eEEEEEecCceE-EECC--ccceeEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 44556666666543 57899986 999999999999 7764 200146899999999999999998765 3455554
Q ss_pred EE
Q 027919 166 IA 167 (217)
Q Consensus 166 l~ 167 (217)
+.
T Consensus 82 ~~ 83 (276)
T 3gbg_A 82 SV 83 (276)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 127
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.51 E-value=0.0004 Score=58.35 Aligned_cols=63 Identities=13% Similarity=0.172 Sum_probs=49.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEec
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNN 158 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 158 (217)
.++....+..||...+.++ . ..|++|||+|++++... +|+ .+++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~-~-~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH-K-IHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC-S-SCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC-C-CCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 4567777888877444332 3 48999999999999864 355 67999999999999998887765
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.50 E-value=0.00046 Score=58.59 Aligned_cols=73 Identities=19% Similarity=0.328 Sum_probs=57.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEc--CCCeEEEEecCC-CcEEEEEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFP--RGLVHFQKNNGN-VPASVIAGF 169 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P--~g~~H~~~N~g~-~~a~~l~~~ 169 (217)
+....+.||...++|-|.+-+.+.||++|+++.. |+.|. ..++++||+-+.. +|+.|.-.|..+ ++.+++-+.
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 4567789998899999998444789999998876 33344 5689999999995 568999999754 677776544
No 129
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.36 E-value=0.00046 Score=57.39 Aligned_cols=78 Identities=15% Similarity=0.258 Sum_probs=58.6
Q ss_pred CCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC
Q 027919 71 FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG 150 (217)
Q Consensus 71 ~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 150 (217)
.|.++..+.... . -.+..++++||...++|.| +..|+ +||+|++.-. + .++.+|+.+..|.|
T Consensus 133 ~Gv~~~~L~~~~--~-----E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~d~-----~----~~~~~GsWlR~P~g 194 (223)
T 3o14_A 133 EGISTSLLHEDE--R-----ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTVN-----D----EVLGRNAWLRLPEG 194 (223)
T ss_dssp TTEEEEEEEECS--S-----CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEEET-----T----EEECTTEEEEECTT
T ss_pred CCeEEEEEecCC--C-----cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEEEC-----C----ceECCCeEEEeCCC
Confidence 455666665443 2 2456678899999999999 56885 9999997622 2 37999999999999
Q ss_pred CeEEEEecCCCcEEEEE
Q 027919 151 LVHFQKNNGNVPASVIA 167 (217)
Q Consensus 151 ~~H~~~N~g~~~a~~l~ 167 (217)
..|.... |++.|.++.
T Consensus 195 s~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 195 EALSATA-GARGAKIWM 210 (223)
T ss_dssp CCEEEEE-EEEEEEEEE
T ss_pred CccCcEE-CCCCeEEEE
Confidence 9998877 566776654
No 130
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.26 E-value=0.0015 Score=54.87 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=57.7
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEE--cCCCeEEEEecC-CCcEEEEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVF--PRGLVHFQKNNG-NVPASVIAG 168 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~--P~g~~H~~~N~g-~~~a~~l~~ 168 (217)
.+....+.||...++|-|.+-+.+.||++|+++-. |+.|. ..++++||+-.. -+|+.|.-.|.. +++.+++-+
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 34466788998889999998666899999998876 33344 568999999999 556999999975 467777654
Q ss_pred E
Q 027919 169 F 169 (217)
Q Consensus 169 ~ 169 (217)
.
T Consensus 118 W 118 (242)
T 1tq5_A 118 W 118 (242)
T ss_dssp E
T ss_pred E
Confidence 4
No 131
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.00 E-value=0.0023 Score=53.50 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=55.7
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEec---EEEEEEEecC-------------CeEE------EEEeCCCCEEEEc
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLEG---QLDVGFFTTA-------------NVLV------SKSIKKGENFVFP 148 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G---~~~~~~~~~~-------------~~~~------~~~L~~GD~~~~P 148 (217)
..--.+.+.||...|.|.|+.-.|-+++.-| .+++...+++ |+.+ ..+|+||+++-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4556688899999999999988999999988 4455444322 1111 3489999999999
Q ss_pred CCCeEEEEecCC-CcEEE
Q 027919 149 RGLVHFQKNNGN-VPASV 165 (217)
Q Consensus 149 ~g~~H~~~N~g~-~~a~~ 165 (217)
+|+.|+++..+. .++.+
T Consensus 186 Pg~~H~F~ae~g~G~vli 203 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLV 203 (246)
T ss_dssp TTEEEEEEECTTSCCEEE
T ss_pred CCCEEEEEecCCCccEEE
Confidence 999999998764 24444
No 132
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.93 E-value=0.0057 Score=53.73 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=54.9
Q ss_pred EEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEE-ecC---------------------------------CeEEEEEeC
Q 027919 96 IDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFF-TTA---------------------------------NVLVSKSIK 140 (217)
Q Consensus 96 ~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~-~~~---------------------------------~~~~~~~L~ 140 (217)
+.+.| |+..++|+.+. .-++..+.|+=++.+. .+. ...+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 55666 77889999875 7888899999888877 321 012567999
Q ss_pred CCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 141 KGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 141 ~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
|||++++|+|.+|+..+.+++...-+++-
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 99999999999999999865555555443
No 133
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.92 E-value=0.0043 Score=47.12 Aligned_cols=71 Identities=23% Similarity=0.213 Sum_probs=54.3
Q ss_pred cCCCcCCCC----CCCCCcEEEEEEecEEEEEEEecCCe---EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc
Q 027919 99 APGGINPPH----THPRATEIVFVLEGQLDVGFFTTANV---LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN 170 (217)
Q Consensus 99 ~PG~~~p~H----~Hp~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~ 170 (217)
.|++..+.| +|++..+.+.|++|++.+.+-++.|. .......+|+..++|++.+|++.-.++ ++++-.-|.
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 366777889 59988899999999999986444332 245678999999999999999997654 666644443
No 134
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.92 E-value=0.0078 Score=48.55 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=52.2
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEecEEE-EEEEecC-----CeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 99 APGGINPPHTH--PRATEIVFVLEGQLD-VGFFTTA-----NVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 99 ~PG~~~p~H~H--p~a~Ei~yVl~G~~~-~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.+|....+|+| ....++++|++|++. +.++... |+.....|.+ +..++||+|..|.+.+.+++ +.++.
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNY 133 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 47888899999 556999999999974 4444322 4666777876 58999999999999999876 54443
No 135
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.89 E-value=0.0044 Score=50.56 Aligned_cols=66 Identities=12% Similarity=0.161 Sum_probs=52.5
Q ss_pred cCCCcCCCCCCCCCcEEEEEEe-cEEEEEEEecC-----CeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 99 APGGINPPHTHPRATEIVFVLE-GQLDVGFFTTA-----NVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~Ei~yVl~-G~~~~~~~~~~-----~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
.+|....+|.|+. .++++|++ |++...+.+-. |+.....|..+..++||+|..|.+.+.++. +.++
T Consensus 68 ~~GvlRGlH~h~q-~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~ 139 (197)
T 1nxm_A 68 RKNVLRGLHAEPW-DKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYS 139 (197)
T ss_dssp ETTBEEEEEECSS-CEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCCcceeeeccc-ceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEE
Confidence 6777889999974 89999999 99644443322 566788999999999999999999998765 5444
No 136
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.88 E-value=0.0095 Score=48.02 Aligned_cols=68 Identities=18% Similarity=0.176 Sum_probs=52.3
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEecEE-EEEEEecC-----CeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 99 APGGINPPHTH--PRATEIVFVLEGQL-DVGFFTTA-----NVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 99 ~PG~~~p~H~H--p~a~Ei~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.+|....+|+| ....++++|++|++ .+.++... |+.....|.+ +..++||+|..|.+.+.+++ +.++.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 134 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLY 134 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEE
Confidence 47888899999 55689999999997 45554322 4666777776 58999999999999999876 54443
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.73 E-value=0.014 Score=47.47 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=50.9
Q ss_pred EcCCCcCCCCCCCC---CcEEEEEEecEE-EEEEEecC-----CeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEE
Q 027919 98 YAPGGINPPHTHPR---ATEIVFVLEGQL-DVGFFTTA-----NVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASV 165 (217)
Q Consensus 98 l~PG~~~p~H~Hp~---a~Ei~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~ 165 (217)
-.+|....+|+|.. ..++++|++|++ .+.++... |+.....|.+ +..++||+|..|.+.+.++. +.+
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ 149 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVI 149 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEE
Confidence 35777888999963 489999999999 44444322 4566778875 68999999999999999864 444
No 138
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.70 E-value=0.0082 Score=49.24 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=51.8
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEecEEEEEEEe-c-----CCeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 99 APGGINPPHTHP---RATEIVFVLEGQLDVGFFT-T-----ANVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 99 ~PG~~~p~H~Hp---~a~Ei~yVl~G~~~~~~~~-~-----~~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.+|....+|+|. ...++++|++|++.-.+++ . .|+.....|.+ +..++||+|..|.+.+.++....++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYK 157 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEE
Confidence 578888999995 3589999999996544443 1 15667778876 78999999999999999865333333
No 139
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.57 E-value=0.0051 Score=49.82 Aligned_cols=66 Identities=18% Similarity=0.381 Sum_probs=49.5
Q ss_pred EEEEEcCCC-cCCCCCCCCCcEEEEEEecEEEEEEEecCC----------------------------------eEEEEE
Q 027919 94 ARIDYAPGG-INPPHTHPRATEIVFVLEGQLDVGFFTTAN----------------------------------VLVSKS 138 (217)
Q Consensus 94 ~~~~l~PG~-~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~----------------------------------~~~~~~ 138 (217)
..+-+.+++ ..++|..+. .-++.+++|+=++.+..+.. +....+
T Consensus 126 ~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 345566654 566787775 77888999998888864310 224678
Q ss_pred eCCCCEEEEcCCCeEEEEecCC
Q 027919 139 IKKGENFVFPRGLVHFQKNNGN 160 (217)
Q Consensus 139 L~~GD~~~~P~g~~H~~~N~g~ 160 (217)
|+|||++++|+|-.|...|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999853
No 140
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.51 E-value=0.028 Score=45.19 Aligned_cols=67 Identities=13% Similarity=0.117 Sum_probs=51.0
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEecEEE-EEEEecC-----CeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 99 APGGINPPHTHP---RATEIVFVLEGQLD-VGFFTTA-----NVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 99 ~PG~~~p~H~Hp---~a~Ei~yVl~G~~~-~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
.+|....+|+|. ...++++|++|++. +.++... |+.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 478888999995 56899999999974 4444322 4566777776 57999999999999999876 4443
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.35 E-value=0.033 Score=45.58 Aligned_cols=67 Identities=12% Similarity=0.073 Sum_probs=50.6
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEecEEE-EEEEecC-----CeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEE
Q 027919 99 APGGINPPHTHPR---ATEIVFVLEGQLD-VGFFTTA-----NVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 99 ~PG~~~p~H~Hp~---a~Ei~yVl~G~~~-~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l 166 (217)
.+|....+|+|.. ..++++|++|++. +.++... |+.....|.+ +..++||+|..|.+.+.+++ +.++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMS 132 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEE
Confidence 5777888999953 5899999999975 4443211 4567778887 47999999999999999876 4443
No 142
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.34 E-value=0.037 Score=45.68 Aligned_cols=64 Identities=11% Similarity=0.018 Sum_probs=49.5
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEecEEE-EEEEecC-----CeEEEEEeCCC--CEEEEcCCCeEEEEecCCCc
Q 027919 99 APGGINPPHTHPR---ATEIVFVLEGQLD-VGFFTTA-----NVLVSKSIKKG--ENFVFPRGLVHFQKNNGNVP 162 (217)
Q Consensus 99 ~PG~~~p~H~Hp~---a~Ei~yVl~G~~~-~~~~~~~-----~~~~~~~L~~G--D~~~~P~g~~H~~~N~g~~~ 162 (217)
.+|....+|+|.. ..++++|++|++. +.++... |+.....|.+. ..++||+|..|.+.+.+++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 137 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEA 137 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCe
Confidence 4788888999964 5899999999974 4444321 45667778774 79999999999999998763
No 143
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.33 E-value=0.028 Score=47.98 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=56.0
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcC--CCeEEEEecCCCcEEEEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPR--GLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~--g~~H~~~N~g~~~a~~l~~ 168 (217)
-+.. ...++...++|-|.+-+=+-||++|+++-. |+.|. ..++++||+-..-+ |+.|.-.|..+++.+.+-+
T Consensus 41 ~ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 114 (277)
T 2p17_A 41 LLME-DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQL 114 (277)
T ss_dssp EEEE-EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEE
T ss_pred EEec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEE
Confidence 3445 667888899999998344788999998876 44454 56899999888876 6899999987778877654
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.27 E-value=0.053 Score=45.00 Aligned_cols=64 Identities=14% Similarity=0.033 Sum_probs=49.1
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEecEEE-EEEEec-----CCeEEEEEeCCC--CEEEEcCCCeEEEEecCCCc
Q 027919 99 APGGINPPHTHPR---ATEIVFVLEGQLD-VGFFTT-----ANVLVSKSIKKG--ENFVFPRGLVHFQKNNGNVP 162 (217)
Q Consensus 99 ~PG~~~p~H~Hp~---a~Ei~yVl~G~~~-~~~~~~-----~~~~~~~~L~~G--D~~~~P~g~~H~~~N~g~~~ 162 (217)
.+|....+|+|.. ..++++|++|++. +.++.. .|+.....|.+. ..++||+|..|.+.+.+++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 148 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNS 148 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCE
Confidence 5777888999953 4899999999974 444321 145667777764 79999999999999998763
No 145
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=96.19 E-value=0.013 Score=50.59 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=48.4
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEec---------CCeEEEEEeCCCCEEEEcCCCeEEEEecCCC
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTT---------ANVLVSKSIKKGENFVFPRGLVHFQKNNGNV 161 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~---------~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 161 (217)
+.++|+.+.||+.+.+|.-+ .|.....+|..++.+.=. +|+ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999998655 243334456555444321 133 67999999999999999999999875
Q ss_pred cEEEE
Q 027919 162 PASVI 166 (217)
Q Consensus 162 ~a~~l 166 (217)
+-+.+
T Consensus 167 ~RIhL 171 (290)
T 1e5r_A 167 SRQSL 171 (290)
T ss_dssp CCCEE
T ss_pred CeEEE
Confidence 54433
No 146
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.19 E-value=0.019 Score=50.46 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=54.4
Q ss_pred EEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEEecCC-----------------------------------eEEEEEe
Q 027919 96 IDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFFTTAN-----------------------------------VLVSKSI 139 (217)
Q Consensus 96 ~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~-----------------------------------~~~~~~L 139 (217)
+.+.+ |...++|+.+. .-+..+++|+=++.+..+.. +.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 55654 45678899886 78888999998887654210 3467899
Q ss_pred CCCCEEEEcCCCeEEEEecCC-CcEEEEEEE
Q 027919 140 KKGENFVFPRGLVHFQKNNGN-VPASVIAGF 169 (217)
Q Consensus 140 ~~GD~~~~P~g~~H~~~N~g~-~~a~~l~~~ 169 (217)
++||++++|+|.+|...|.++ .....+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 444444443
No 147
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.07 E-value=0.08 Score=43.18 Aligned_cols=77 Identities=6% Similarity=-0.073 Sum_probs=55.6
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEecEEEEEEEec------CCeEEEEEeCC--CCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 99 APGGINPPHTHP---RATEIVFVLEGQLDVGFFTT------ANVLVSKSIKK--GENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 99 ~PG~~~p~H~Hp---~a~Ei~yVl~G~~~~~~~~~------~~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.+|....+|.|. ....+++|++|++.-.+++- .|+.....|.+ +..++||+|..|.+.+.+++...++-
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 578788899884 45899999999976555542 15666777876 67999999999999998765444343
Q ss_pred EEcCCCCc
Q 027919 168 GFNSQLQG 175 (217)
Q Consensus 168 ~~~s~~pg 175 (217)
+-+.-+|+
T Consensus 132 ~t~~Y~p~ 139 (201)
T 4hn1_A 132 CSSGYAPA 139 (201)
T ss_dssp ESSCCCGG
T ss_pred CCCCcChh
Confidence 32333443
No 148
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.05 E-value=0.061 Score=45.59 Aligned_cols=86 Identities=21% Similarity=0.221 Sum_probs=64.5
Q ss_pred CCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEc
Q 027919 69 NTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFP 148 (217)
Q Consensus 69 ~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P 148 (217)
|...++.+.++. + +-|-+-.++.++|+-..|+-.|.--.| +||++|++.++ + ..|.+|...++|
T Consensus 75 ~~~~gs~RlLs~---~---d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----~----~~l~~h~Y~f~P 138 (303)
T 2qdr_A 75 NIAPGSRRLLTW---H---DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----E----WQLNKHSYSFIP 138 (303)
T ss_dssp TSCCEEEEEEEE---C---TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----T----EEECTTEEEEEC
T ss_pred CcCccceeeccc---C---CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----C----EEecCCceEEec
Confidence 444556666654 2 235578899999999888866654477 99999999877 3 379999999999
Q ss_pred CCCeE-EEEecCCCcEEEEEEEc
Q 027919 149 RGLVH-FQKNNGNVPASVIAGFN 170 (217)
Q Consensus 149 ~g~~H-~~~N~g~~~a~~l~~~~ 170 (217)
+|+.- .+.-.|++++.++...+
T Consensus 139 aGV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 139 AGVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp TTCCBCCEEEETTSCEEEEEEEC
T ss_pred CCCccCceeecCCCCcEEEEEec
Confidence 99855 44556888999888743
No 149
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.91 E-value=0.064 Score=46.77 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=52.5
Q ss_pred EEEEcC-CCcCCCCCCCCCcEEEEEEecEEEEEEEecC------------------------------CeEEEEEeCCCC
Q 027919 95 RIDYAP-GGINPPHTHPRATEIVFVLEGQLDVGFFTTA------------------------------NVLVSKSIKKGE 143 (217)
Q Consensus 95 ~~~l~P-G~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~------------------------------~~~~~~~L~~GD 143 (217)
.+.+.| |+..++|+.+. .-++.+++|+=++.+..+. -+.+..+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344544 45677898885 7778889999888776431 024678999999
Q ss_pred EEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 144 NFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 144 ~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
++++|+|.+|...|.+ ....+.+
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEE
Confidence 9999999999999984 4555554
No 150
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.89 E-value=0.058 Score=49.03 Aligned_cols=64 Identities=23% Similarity=0.436 Sum_probs=48.5
Q ss_pred EEEEcCCCc--CCCCCCCCCcEEEEEEecEEEEEEEecCC----------------eEEEEEeCCCCEEEEcCCCeEEEE
Q 027919 95 RIDYAPGGI--NPPHTHPRATEIVFVLEGQLDVGFFTTAN----------------VLVSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 95 ~~~l~PG~~--~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~----------------~~~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
.+.+.|++. .++|+... .-++..++|+=++.+..+.. ..+..+|++||++|+|+|.+|+..
T Consensus 142 n~y~~~~g~~g~~~H~D~~-dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~ 220 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYDDV-EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQAD 220 (442)
T ss_dssp EEEEECTTCBCSCSEECSS-EEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEE
T ss_pred ceEECCCCCCCccceECCc-ceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEE
Confidence 345555553 36999875 77888999998888765421 124679999999999999999999
Q ss_pred ecC
Q 027919 157 NNG 159 (217)
Q Consensus 157 N~g 159 (217)
+.+
T Consensus 221 s~~ 223 (442)
T 2xdv_A 221 TPA 223 (442)
T ss_dssp CCS
T ss_pred ecC
Confidence 875
No 151
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=95.89 E-value=0.052 Score=46.66 Aligned_cols=73 Identities=16% Similarity=0.248 Sum_probs=56.7
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcE-EEEEE-ecEEEEEEEecCCeEEEEEeCCCCEEEEcC--CCeEEEEecCCCcEEEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRATE-IVFVL-EGQLDVGFFTTANVLVSKSIKKGENFVFPR--GLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~E-i~yVl-~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~--g~~H~~~N~g~~~a~~l~ 167 (217)
-+....+.|+...++|-|.+ .| +-||+ +|+++-. |+.|. ..++++||+-..-+ |+.|.-.|..+++.+.+-
T Consensus 41 ~ld~~~~~~~~Gf~~HPHrg-~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQ 115 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHRG-FETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQ 115 (290)
T ss_dssp EEEEEEECTTCBEEEEEEBS-EEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEE
T ss_pred EEEccccCCCCCCCCCCCCC-eEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEE
Confidence 44556788887789999998 66 67899 9999876 34454 56899999888776 689999998777888765
Q ss_pred EE
Q 027919 168 GF 169 (217)
Q Consensus 168 ~~ 169 (217)
+.
T Consensus 116 lW 117 (290)
T 1j1l_A 116 LW 117 (290)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 152
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.67 E-value=0.087 Score=48.43 Aligned_cols=73 Identities=19% Similarity=0.329 Sum_probs=52.9
Q ss_pred EEEEcCCCc--CCCCCCCCCcEEEEEEecEEEEEEEecCC--------------------eEEEEEeCCCCEEEEcCCCe
Q 027919 95 RIDYAPGGI--NPPHTHPRATEIVFVLEGQLDVGFFTTAN--------------------VLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 95 ~~~l~PG~~--~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------------~~~~~~L~~GD~~~~P~g~~ 152 (217)
.+.+.|++. .++|+-+. .-++.-++|+=++.+..+.. .....+|++||++++|+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 355666553 47998886 77888888988888765321 12467999999999999999
Q ss_pred EEEEecCCCcEEEEEE
Q 027919 153 HFQKNNGNVPASVIAG 168 (217)
Q Consensus 153 H~~~N~g~~~a~~l~~ 168 (217)
|+..+.+++...-+.+
T Consensus 246 H~~~s~~~~~SlhlTi 261 (489)
T 4diq_A 246 HQAECQDGVHSLHLTL 261 (489)
T ss_dssp EEEEBCSSCCEEEEEE
T ss_pred eEEEecCCCceEEEee
Confidence 9999986554444433
No 153
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.25 E-value=0.047 Score=46.67 Aligned_cols=62 Identities=13% Similarity=0.116 Sum_probs=44.9
Q ss_pred EcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 98 YAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 98 l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
+.+|.....-. ..+-+++++||+..+.++ ++ ++.|++||++.||++..|.+.-. +.++++.+
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~~---~q--~~~L~~~DsLLIpa~~~y~~~r~--~gsv~L~I 275 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTMG---GR--RLSLAPDDSLLVLAGTSYAWERT--QGSVALSV 275 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEEC--TTCEEEEE
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEEC---Ce--EEeccCCCEEEecCCCeEEEEec--CCeEEEEE
Confidence 67775432211 126889999999998876 34 78999999999999999988764 34444443
No 154
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=94.53 E-value=0.15 Score=36.56 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=47.7
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 96 IDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 96 ~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
-.+.||. .+....+.|+.-|++|++++.+.+++ ..+++++||.+.+|++.--.++.. ++..+++.|
T Consensus 28 GVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~---ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~y 93 (94)
T 2oyz_A 28 GVMLPGE---YTFGTQAPERMTVVKGALVVKRVGEA---DWTTYSSGESFDVEGNSSFELQVK--DATAYLCEY 93 (94)
T ss_dssp EEECSEE---EEEEESSCEEEEEEESEEEEEETTCS---SCEEEETTCEEEECSSEEEEEEES--SCEEEEEEC
T ss_pred EEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCC---cCEEECCCCEEEECCCCEEEEEEc--ccEeEEEEc
Confidence 3456664 33334468999999999999997532 367999999999999987666653 555566543
No 155
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.46 E-value=0.51 Score=42.97 Aligned_cols=104 Identities=12% Similarity=0.019 Sum_probs=65.1
Q ss_pred CCCeeeeCCCCCC----CccCCCCceEEEEecCCcCCCCcCceEEEEEEEcCCC-c-CCCCCCCCCcEEEEEEecEEEEE
Q 027919 53 EMDFFSDKLAKPA----ATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGG-I-NPPHTHPRATEIVFVLEGQLDVG 126 (217)
Q Consensus 53 ~~df~~~~~~~~~----~~~~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~-~-~p~H~Hp~a~Ei~yVl~G~~~~~ 126 (217)
++...|+.+.-+. .+ ...-+..+.+.......-. |+.+... .++. + ...-...+++|++++-+|++.+.
T Consensus 118 p~qLrw~p~~ip~~~~~~~-Dfv~Gl~tl~gngD~~~~~--G~aI~~y--~~n~sM~~~~f~NaDGD~Livpq~G~l~i~ 192 (471)
T 1eyb_A 118 PNQLRWKPFEIPKASQKKV-DFVSGLHTLCGAGDIKSNN--GLAIHIF--LCNTSMENRCFYNSDGDFLIVPQKGNLLIY 192 (471)
T ss_dssp CSCEEECSCCCCCTTTCCC-CTTTTEEEEEEESCGGGTC--CEEEEEE--EECSCCCSEEEEESSEEEEEEEEESCEEEE
T ss_pred ccccccCCCCCCccccCCC-CcccchhheeccCCccccc--ceEEEEE--eCCCCcccceeecCCCCEEEEEEeCCEEEE
Confidence 5566677654432 22 2333455555444443333 3333222 2222 3 33455667799999999999988
Q ss_pred EEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 127 FFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 127 ~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
-. -|+ ..+++||.++||+|+.+++.-.+ +++.+++
T Consensus 193 TE--fG~---L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 193 TE--FGK---MLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp ET--TEE---EEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred Ee--ccc---EEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 53 354 57999999999999999987665 7776654
No 156
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.06 E-value=0.15 Score=46.50 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=48.4
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
++|+..+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||+++||.|.+
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 445667889998643 456799999888876432 134578899999999999999
Q ss_pred EEEEecCCC
Q 027919 153 HFQKNNGNV 161 (217)
Q Consensus 153 H~~~N~g~~ 161 (217)
|...|..+.
T Consensus 284 H~V~nleds 292 (451)
T 2yu1_A 284 HAVYTPTDT 292 (451)
T ss_dssp EEEECSSCE
T ss_pred EEEecCCCe
Confidence 999998543
No 157
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.97 E-value=0.19 Score=40.71 Aligned_cols=90 Identities=16% Similarity=0.168 Sum_probs=58.9
Q ss_pred cCCcCCCCcCce-EEEEEEEcCCCcCCCCCCCCCcEE----EEEEec-EEEEEEEecCCeEEEEEeCCCCEEEEcCCCeE
Q 027919 80 VQTIPGLNTLGV-SLARIDYAPGGINPPHTHPRATEI----VFVLEG-QLDVGFFTTANVLVSKSIKKGENFVFPRGLVH 153 (217)
Q Consensus 80 ~~~~Pgl~~~gi-s~~~~~l~PG~~~p~H~Hp~a~Ei----~yVl~G-~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H 153 (217)
.+++|+...... ++....+.||+.+++|..+....+ -.++-. ...+.++ |+ .+..++|++++|.-...|
T Consensus 90 L~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~---~~--~~~w~eGe~~~fDds~~H 164 (197)
T 3rcq_A 90 LEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA---NE--TKTWEEGKVLIFDDSFEH 164 (197)
T ss_dssp HTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET---TE--EECCCBTCEEEECTTSCE
T ss_pred HHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC---CE--EEEeeCCcEEEEcCCeEE
Confidence 356675543222 456678999999999998753332 122222 3444443 33 679999999999999999
Q ss_pred EEEecCCCcEEEEEEEcCCCCc
Q 027919 154 FQKNNGNVPASVIAGFNSQLQG 175 (217)
Q Consensus 154 ~~~N~g~~~a~~l~~~~s~~pg 175 (217)
...|.++++ +++.+++-..|.
T Consensus 165 ev~N~~d~~-RvvL~~D~~rPd 185 (197)
T 3rcq_A 165 EVWQDASSF-RLIFIVDVWHPE 185 (197)
T ss_dssp EEEECSSSC-EEEEEEEEECTT
T ss_pred EEEECCCCC-EEEEEEeeeCCC
Confidence 999998764 444444444443
No 158
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=93.88 E-value=0.22 Score=36.70 Aligned_cols=68 Identities=13% Similarity=0.187 Sum_probs=50.2
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 96 IDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 96 ~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
-.+.||. .|.+....+.|+.-|++|++++.+.++. ..+++++|+.|.+|++.--.++.. ++..+++.|
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~---eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIADST---ESELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEETTCS---SCEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcc---cCEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 3567763 2344445579999999999999997532 367999999999999987766643 566666654
No 159
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=93.54 E-value=0.24 Score=43.27 Aligned_cols=65 Identities=22% Similarity=0.208 Sum_probs=46.7
Q ss_pred EEEcC-CCcCCCCCCCCCc-EEEEEEecEEEEEEEecC---------------------------------------CeE
Q 027919 96 IDYAP-GGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA---------------------------------------NVL 134 (217)
Q Consensus 96 ~~l~P-G~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~---------------------------------------~~~ 134 (217)
+-+.+ |...++|+++... -+..++.|+=++.+..+. .+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 44554 4556788887532 477888887776665321 012
Q ss_pred EEEEeCCCCEEEEcCCCeEEEEecCC
Q 027919 135 VSKSIKKGENFVFPRGLVHFQKNNGN 160 (217)
Q Consensus 135 ~~~~L~~GD~~~~P~g~~H~~~N~g~ 160 (217)
+..++++||++++|+|.+|...|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 56789999999999999999999864
No 160
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.34 E-value=0.53 Score=39.99 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=52.7
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCC--c------EEEEE-Ee---cEEEEEEEecCC-eEEEEEeCCCCEEEEcCCCeE
Q 027919 90 GVSLARIDYAPGGI---NPPHTHPRA--T------EIVFV-LE---GQLDVGFFTTAN-VLVSKSIKKGENFVFPRGLVH 153 (217)
Q Consensus 90 gis~~~~~l~PG~~---~p~H~Hp~a--~------Ei~yV-l~---G~~~~~~~~~~~-~~~~~~L~~GD~~~~P~g~~H 153 (217)
.+-+.++ +.||+. .|||.|.+. . |+.|- +. |-+...+-+.++ -.....++-||++.+|+|. |
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-H 229 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-H 229 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-C
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-C
Confidence 4556666 777764 599999863 3 88764 33 444443311111 1246899999999999999 9
Q ss_pred EEEecCCCcEEEEEEEcCC
Q 027919 154 FQKNNGNVPASVIAGFNSQ 172 (217)
Q Consensus 154 ~~~N~g~~~a~~l~~~~s~ 172 (217)
..........-+|.+....
T Consensus 230 p~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 230 PVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CEEECTTCEEEEEEEEECS
T ss_pred CCcCCCCcccEEEEEEECC
Confidence 8665544555577777653
No 161
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=93.06 E-value=0.34 Score=41.42 Aligned_cols=83 Identities=20% Similarity=0.281 Sum_probs=54.8
Q ss_pred ceEEEEEEEcCCC---cCCCCCCCCCcEEEEEEe---cEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcE
Q 027919 90 GVSLARIDYAPGG---INPPHTHPRATEIVFVLE---GQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPA 163 (217)
Q Consensus 90 gis~~~~~l~PG~---~~p~H~Hp~a~Ei~yVl~---G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a 163 (217)
.+.+....+.||+ ..|||.|.+..|..|--+ ....+++.++.++.....++-||++.+|...+|. -.|.+.-
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~Y 256 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKAY 256 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSCC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccce
Confidence 3456767788887 368999987666666443 2234444445555445678999999999655665 4576666
Q ss_pred EEEEEEcCCCC
Q 027919 164 SVIAGFNSQLQ 174 (217)
Q Consensus 164 ~~l~~~~s~~p 174 (217)
.+|++....+.
T Consensus 257 ~ylwvMAG~n~ 267 (282)
T 1xru_A 257 TFIWGMVGENQ 267 (282)
T ss_dssp EEEEEEEESCC
T ss_pred EEEEEEEcCCc
Confidence 67777655543
No 162
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=92.78 E-value=0.42 Score=35.68 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=42.3
Q ss_pred CCcEEEEEEecEEEEEEEecCCe---EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC
Q 027919 111 RATEIVFVLEGQLDVGFFTTANV---LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 111 ~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s 171 (217)
+.-.-+.|++|++++..-.+.+. .....+.+|+..++|+..+|++. . .+++++..-|-.
T Consensus 37 GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe-~-sdD~~f~leFyc 98 (119)
T 3dl3_A 37 DVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE-L-SDDAQFNINFWS 98 (119)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE-E-CTTCEEEEEEEE
T ss_pred cEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE-E-CCCeEEEEEEEE
Confidence 44566889999999986443322 23568999999999999999999 3 345555544443
No 163
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=92.77 E-value=0.19 Score=46.20 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=48.0
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
++|+..+.|.++... -+..+++|+=++.+..+. .+.+..++++||++++|+|.+
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 445668899998633 356799999888887441 134577999999999999999
Q ss_pred EEEEecCC
Q 027919 153 HFQKNNGN 160 (217)
Q Consensus 153 H~~~N~g~ 160 (217)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999843
No 164
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=92.62 E-value=0.35 Score=43.99 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=47.9
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
++|+..+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||++++|+|.+
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 445567889887643 356799999888876432 133578999999999999999
Q ss_pred EEEEecCCC
Q 027919 153 HFQKNNGNV 161 (217)
Q Consensus 153 H~~~N~g~~ 161 (217)
|...|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998543
No 165
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.55 E-value=0.29 Score=39.90 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=46.0
Q ss_pred EEEEEEEcCCCcCCCCCCCCCc--EEEEEE----ecEEEEEEEecC------------------CeEEEEEeCCCCEEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRAT--EIVFVL----EGQLDVGFFTTA------------------NVLVSKSIKKGENFVF 147 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~--Ei~yVl----~G~~~~~~~~~~------------------~~~~~~~L~~GD~~~~ 147 (217)
......+++|+...+|.|+++. =++|+- .|.+.+. ++. .......-++|++++|
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 3455677899999999998621 223332 2444443 221 1112456799999999
Q ss_pred cCCCeEEEEecCCCcEEEEEEE
Q 027919 148 PRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 148 P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
|+.+.|...-...+.-++-.+|
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsF 203 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSF 203 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEE
Confidence 9999998873322333444444
No 166
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=91.75 E-value=4.8 Score=33.12 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=77.4
Q ss_pred CCCCceEEEEecCCcC------CCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecE-EEEEEEecCC---------
Q 027919 69 NTFGSTVTAANVQTIP------GLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQ-LDVGFFTTAN--------- 132 (217)
Q Consensus 69 ~~~g~~v~~~~~~~~P------gl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~-~~~~~~~~~~--------- 132 (217)
.|.|+...+....... +-. ...+....-+.+|....+|. -.+.|+++-..|. +++.+..++|
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~S~~HR-v~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~ 110 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESPSHLHR-LCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQ 110 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSCEEEEE-CSSEEEEEEEEESCEEEEEEESSSTTTTC----
T ss_pred CCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCCcccEE-ecCCEEEEEECCCCEEEEEEcCCCccccccccc
Confidence 4566666666544331 111 11244555677777544443 3479999999998 6787776666
Q ss_pred -------------------eEEEEEeCC----CC--EEEEcCCCeEEEEecCCC-----cEEEEEEEcCCCCcceecchh
Q 027919 133 -------------------VLVSKSIKK----GE--NFVFPRGLVHFQKNNGNV-----PASVIAGFNSQLQGTQNIALT 182 (217)
Q Consensus 133 -------------------~~~~~~L~~----GD--~~~~P~g~~H~~~N~g~~-----~a~~l~~~~s~~pg~~~~~~~ 182 (217)
+....+|.+ |+ -++||+|.+...+..+++ .-.+++.. -.||+..-...
T Consensus 111 ~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~DFe 188 (225)
T 3m3i_A 111 PPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRDFE 188 (225)
T ss_dssp --------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGGCE
T ss_pred ccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchhcE
Confidence 445566754 66 578999998887766543 33333322 24555332222
Q ss_pred hhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 183 LFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 183 ~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
+ ++.+-|.+.|.--++.|++|-
T Consensus 189 l------~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 189 I------FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp E------CBHHHHHHHCGGGHHHHHHHS
T ss_pred e------cCHHHHHHHCchHHHHHHHhc
Confidence 2 345666666766667777664
No 167
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=91.67 E-value=0.33 Score=43.05 Aligned_cols=62 Identities=18% Similarity=0.211 Sum_probs=47.5
Q ss_pred cCCCcCCCCCCCCCcE-EEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRATE-IVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~E-i~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
++|+..+.|..+..+- +..+++|+=++.+..+. .+.+..++++||++++|+|.+
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 4455678899986443 55799999888876321 134678999999999999999
Q ss_pred EEEEecCC
Q 027919 153 HFQKNNGN 160 (217)
Q Consensus 153 H~~~N~g~ 160 (217)
|+..|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999743
No 168
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=91.46 E-value=0.4 Score=42.96 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=48.6
Q ss_pred EEEc-CCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEc
Q 027919 96 IDYA-PGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFP 148 (217)
Q Consensus 96 ~~l~-PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P 148 (217)
+-+. .|+..+.|+.+... -+..+++|+=++.+..+. .+.+..++++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 3444 45667889998644 356799999888876432 13457799999999999
Q ss_pred CCCeEEEEecC
Q 027919 149 RGLVHFQKNNG 159 (217)
Q Consensus 149 ~g~~H~~~N~g 159 (217)
+|.+|...|..
T Consensus 259 sGW~H~V~nle 269 (397)
T 3kv9_A 259 TGWIHAVLTSQ 269 (397)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCeEEccCCc
Confidence 99999999984
No 169
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=91.35 E-value=1.3 Score=36.75 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=48.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+.+..++++||.....-..++..=++||++|++++. ++ .|++||.+++..+..-.+.+ .++++++.+-
T Consensus 159 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g~----~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~~ 227 (242)
T 1tq5_A 159 DMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----GV----KASTSDGLAIWDEQAISIHA--DSDSEVLLFD 227 (242)
T ss_dssp SCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----TE----EEETTCEEEEESCSCEEEEE--SSSEEEEEEE
T ss_pred CCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----CE----EeCCCCEEEECCCCeEEEEe--CCCCEEEEEE
Confidence 5678889999998753333344356799999998874 32 69999999998765444554 3566666543
Q ss_pred c
Q 027919 170 N 170 (217)
Q Consensus 170 ~ 170 (217)
-
T Consensus 228 ~ 228 (242)
T 1tq5_A 228 L 228 (242)
T ss_dssp E
T ss_pred C
Confidence 3
No 170
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=91.28 E-value=0.74 Score=41.70 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=48.3
Q ss_pred ceEEEEEEEc--CCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEec---CCCcEE
Q 027919 90 GVSLARIDYA--PGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNN---GNVPAS 164 (217)
Q Consensus 90 gis~~~~~l~--PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~---g~~~a~ 164 (217)
.+++.++++. ++.....-.+. ...+++|++|++++...+ ++.....|++||++++|++..-.+.+. +.+.++
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~--~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~ 432 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG--DDSTKQKIDTGYVFFVAPGSSIELTADSANQDQDFT 432 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT--CGGGCEEEETTCEEEECTTCCEEEEECSSCCSSCCE
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC--cccceEEeccCCEEEEeCCCcEEEEEecccCCCcEE
Confidence 4678888887 44222111234 488999999999987632 201004899999999999844444554 144566
Q ss_pred EEEEE
Q 027919 165 VIAGF 169 (217)
Q Consensus 165 ~l~~~ 169 (217)
++.++
T Consensus 433 ~~~a~ 437 (440)
T 1pmi_A 433 TYRAF 437 (440)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 171
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=90.89 E-value=0.54 Score=40.26 Aligned_cols=82 Identities=16% Similarity=0.162 Sum_probs=46.4
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCCcEEEEEEe---cEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcE
Q 027919 90 GVSLARIDYAPGGI---NPPHTHPRATEIVFVLE---GQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPA 163 (217)
Q Consensus 90 gis~~~~~l~PG~~---~p~H~Hp~a~Ei~yVl~---G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a 163 (217)
.+.+....+.||+. .|||.|.+..|..|--+ ....+++.++.++.+...++-||++.+|++-.|. ..|...-
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~Y 256 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSNY 256 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSCC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcCe
Confidence 34566677888863 68999987677666333 1234444444455445678999999999998886 3444444
Q ss_pred EEEEEEcCCC
Q 027919 164 SVIAGFNSQL 173 (217)
Q Consensus 164 ~~l~~~~s~~ 173 (217)
.+|++....+
T Consensus 257 ~ylwvMAG~n 266 (289)
T 1ywk_A 257 SFIWAMCGEN 266 (289)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEcCC
Confidence 5777665544
No 172
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=90.57 E-value=0.64 Score=33.94 Aligned_cols=55 Identities=16% Similarity=0.118 Sum_probs=42.3
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEe
Q 027919 97 DYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKN 157 (217)
Q Consensus 97 ~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N 157 (217)
.+.||. .+....+.|+.-|++|++++.+.++. ..+++++|+.|.+|++.--.++.
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~---eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGAN---DVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTCS---SCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCCc---cCEEECCCCEEEECCCCcEEEEE
Confidence 456663 34445579999999999999987532 36799999999999998766654
No 173
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=90.56 E-value=5.3 Score=31.50 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=79.2
Q ss_pred CCC-CceEEEEecCCc-------CCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecE-EEEEEEecCCeEEEEEe
Q 027919 69 NTF-GSTVTAANVQTI-------PGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQ-LDVGFFTTANVLVSKSI 139 (217)
Q Consensus 69 ~~~-g~~v~~~~~~~~-------Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~L 139 (217)
.|. |+..++...... .+-. ...+....-+.+|....+|.- .+.|+++-..|. +++.+..++|+....+|
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~L 101 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSIL 101 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEe
Confidence 455 666666654421 1211 123455566778775545544 479999999996 68888888887667777
Q ss_pred C----CCC---EEEEcCCCeEEEEecCCCcEEEEEEEcCCCCcceecchhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 140 K----KGE---NFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 140 ~----~GD---~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
. +|+ -+++|+|.+...+. + .-.+++.. -.||+..-...+ .+.+-|.+.|.--++.|++|-
T Consensus 102 G~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 102 GNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKDFSL------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp SCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHTS
T ss_pred CCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchhcEE------cCHHHHHHHCchHHHHHHHhc
Confidence 5 577 67899999887776 3 23333221 245554322221 456667777776677777664
No 174
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=90.49 E-value=5 Score=31.10 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=60.1
Q ss_pred CCCCceEEEEecCCcCCCCcCceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecE-EEEEEEecCCeEEEEEeC----CCC
Q 027919 69 NTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQ-LDVGFFTTANVLVSKSIK----KGE 143 (217)
Q Consensus 69 ~~~g~~v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~L~----~GD 143 (217)
.|.|+..++.......+-+. -.+....-+.+|....+|.=.+++|+.+-..|. +++.+..+++.....+|. +|+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge 97 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGE 97 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTE
T ss_pred CCCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCc
Confidence 56788888877654433222 234444556677665555532579999999998 788787766665566675 465
Q ss_pred --EEEEcCCCeEEEEecC
Q 027919 144 --NFVFPRGLVHFQKNNG 159 (217)
Q Consensus 144 --~~~~P~g~~H~~~N~g 159 (217)
-++||+|.+...+..|
T Consensus 98 ~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 98 RPQVIVPANCWQSAESLG 115 (154)
T ss_dssp ESEEEECTTCEEEEEESS
T ss_pred ccEEEEcCCEEEEeeECC
Confidence 4789999998877654
No 175
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=90.42 E-value=0.45 Score=42.53 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=47.3
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
+.|+..+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||++++|+|.+
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 455667889887644 466799999888876431 133678999999999999999
Q ss_pred EEEEecC
Q 027919 153 HFQKNNG 159 (217)
Q Consensus 153 H~~~N~g 159 (217)
|...|..
T Consensus 262 H~V~nle 268 (392)
T 3pua_A 262 YATLTPV 268 (392)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999984
No 176
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.09 E-value=1.8 Score=36.32 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=47.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~ 167 (217)
.+.+..+.+++|.........+ .-++||++|++++. +.++ ....|.+||.+++..+..=.+.+ .++++++.
T Consensus 181 ~~~~~~~~L~~g~~~~~~~~~~-~~~l~v~~G~v~v~--g~~~--~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL 251 (256)
T 2vec_A 181 QVWLHHIVLDKGESANFQLHGP-RAYLQSIHGKFHAL--THHE--EKAALTCGDGAFIRDEANITLVA--DSPLRALL 251 (256)
T ss_dssp SCEEEEEEECTTCEEEEECSSS-EEEEEEEESCEEEE--ETTE--EEEEECTTCEEEEESCSEEEEEE--SSSEEEEE
T ss_pred CcEEEEEEECCCCEEEEecCCC-eEEEEEEECEEEEC--Cccc--cceEECCCCEEEECCCCeEEEEe--CCCCEEEE
Confidence 5577888999998754333343 36899999998875 2111 13579999999998765434444 34566554
No 177
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=89.36 E-value=4.3 Score=34.54 Aligned_cols=78 Identities=12% Similarity=0.158 Sum_probs=49.9
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
..+.+..+.+.+|........++..-++||++|++++. +. +. ...+.++.++++..|..=.+.+.++++++++.+
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~-~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD-DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT-TS--CEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc-cc--ceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 45678889999998763333333367899999999874 11 10 135666777777666655555544567777765
Q ss_pred EcC
Q 027919 169 FNS 171 (217)
Q Consensus 169 ~~s 171 (217)
-..
T Consensus 242 ~G~ 244 (290)
T 1j1l_A 242 AGE 244 (290)
T ss_dssp EEC
T ss_pred Ecc
Confidence 443
No 178
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.36 E-value=1.6 Score=37.61 Aligned_cols=55 Identities=20% Similarity=0.286 Sum_probs=40.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCe
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~ 152 (217)
.+++.++++.++... .......++.|++|++++.. +++ ...|++||++++|++.-
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 457777877654332 22235889999999999875 243 56899999999999864
No 179
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=86.63 E-value=14 Score=32.43 Aligned_cols=77 Identities=16% Similarity=0.079 Sum_probs=50.2
Q ss_pred EEEEecCCcCCCCcCceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeE
Q 027919 75 VTAANVQTIPGLNTLGVSLARIDYAPGGINPP-HTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVH 153 (217)
Q Consensus 75 v~~~~~~~~Pgl~~~gis~~~~~l~PG~~~p~-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H 153 (217)
...+.....|-+..+ ....+++.-++...- --|- +--..|.+|++++....++|. ....|.++|+.++-+-++|
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~DL~d~g--e~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGADLIDHA--ENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC------CBCCSS--EEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCE
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcchhhhhcc--cceEEEecCceEEEecCCCCc-cceEECCCCceeecccccc
Confidence 445555666666544 333444444333222 2232 333558999999999877665 7899999999999999999
Q ss_pred EEE
Q 027919 154 FQK 156 (217)
Q Consensus 154 ~~~ 156 (217)
.+.
T Consensus 395 ~w~ 397 (443)
T 3g7d_A 395 RWH 397 (443)
T ss_dssp EEE
T ss_pred ccc
Confidence 998
No 180
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=86.59 E-value=0.95 Score=40.34 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=40.3
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCe
Q 027919 90 GVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~ 152 (217)
.+++.++++.++... ..+. +..++.|++|++++... ++ ...|++||++++|++..
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~ 377 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADES 377 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGC
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCc
Confidence 567788888755321 2444 47999999999987643 33 56899999999999853
No 181
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=86.33 E-value=0.86 Score=42.18 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=46.0
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecC-------------------------CeEEEEEeCCCCEEEEcCCCe
Q 027919 99 APGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTA-------------------------NVLVSKSIKKGENFVFPRGLV 152 (217)
Q Consensus 99 ~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 152 (217)
+.|+...+|..++.+ -+.+|++|+=.+.+..+. ++.+..++++||.+++|+|.+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 445567788887533 566799999888776532 123467999999999999999
Q ss_pred EEEEecC
Q 027919 153 HFQKNNG 159 (217)
Q Consensus 153 H~~~N~g 159 (217)
|...|..
T Consensus 384 HaV~tle 390 (528)
T 3pur_A 384 HAVLTPV 390 (528)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999974
No 182
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=84.50 E-value=2.3 Score=35.94 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=47.9
Q ss_pred CceEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcC-C----CeEEEEecCCCcE
Q 027919 89 LGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPR-G----LVHFQKNNGNVPA 163 (217)
Q Consensus 89 ~gis~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~-g----~~H~~~N~g~~~a 163 (217)
..+.+..+.+++|........++..-++||++|++++. +. ...|++||.+++.. + ..-.+.+. +++
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a 235 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EKL 235 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SSE
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CCc
Confidence 45678889999998754333333356899999998764 31 13699999999986 5 33334443 356
Q ss_pred EEEEEE
Q 027919 164 SVIAGF 169 (217)
Q Consensus 164 ~~l~~~ 169 (217)
+++.+-
T Consensus 236 ~~Ll~~ 241 (277)
T 2p17_A 236 RLLLYA 241 (277)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666543
No 183
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.09 E-value=4.5 Score=34.53 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=39.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCc-EEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEE
Q 027919 90 GVSLARIDYAPGGINPPHTHPRAT-EIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHF 154 (217)
Q Consensus 90 gis~~~~~l~PG~~~p~H~Hp~a~-Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~ 154 (217)
.+++.++++.+.... .. ++. .++.|++| +++... ++ ...|++||++++|++.-.+
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~---~~--~~~l~~G~~~~ipa~~~~~ 284 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRG---KE--TADLHRGYSCLVPASTDSF 284 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEES---SS--EEEECTTCEEEECTTCCEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeC---Ce--EEEEccceEEEEeCCCceE
Confidence 457777877643222 23 457 99999999 887752 33 4589999999999987543
No 184
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=82.40 E-value=14 Score=31.20 Aligned_cols=71 Identities=8% Similarity=0.020 Sum_probs=48.7
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEe--CC--------CCEEEEcCCCeEEEEecCC
Q 027919 91 VSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSI--KK--------GENFVFPRGLVHFQKNNGN 160 (217)
Q Consensus 91 is~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L--~~--------GD~~~~P~g~~H~~~N~g~ 160 (217)
+.+.+++|++|.......-.+ +-.++.+.|.+++.++ |+ ++.+ +. .|++++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~~-E~~iv~l~G~~~V~~~---g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDER-ERCLVLVAGLASVXAA---DS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCSSE-EEEEEEEESCEEEEET---TE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-
T ss_pred eEEEEEEecCCCEEEecCCCc-EEEEEEecceEEEEEC---CE--EEeccccccccccCCCCcEEEECCCCEEEEEecC-
Confidence 578889999999776665432 4446678999999986 34 3333 23 599999999955565544
Q ss_pred CcEEEEEEE
Q 027919 161 VPASVIAGF 169 (217)
Q Consensus 161 ~~a~~l~~~ 169 (217)
++++...-
T Consensus 102 -~~~~~v~s 109 (270)
T 2qjv_A 102 -DLELAVCS 109 (270)
T ss_dssp -SEEEEEEE
T ss_pred -CceEEEEe
Confidence 56665543
No 185
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=81.93 E-value=1.3 Score=39.50 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=28.0
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s 171 (217)
.++..-++||.++||+|.+|..+|..+.--+..-.+++
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~sp 329 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSP 329 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCG
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcCh
Confidence 35778899999999999999999987433333333333
No 186
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=81.91 E-value=2.6 Score=30.10 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=33.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EE---EEEeCCCCEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LV---SKSIKKGENFV 146 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~---~~~L~~GD~~~ 146 (217)
+....+++|..+-.- ...+..+.+|++|.+.+...+++|+ .. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 456778888764222 2224789999999999987654453 22 45789999884
No 187
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=79.77 E-value=6 Score=29.12 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=35.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 145 (217)
+....+++|..+-.. ...+..+.+|++|.+.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 345778888764222 2235789999999999988 44554 334578999966
No 188
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=78.75 E-value=4.7 Score=28.86 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=36.2
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 145 (217)
....+++|..+-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++
T Consensus 29 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 46778888765322122 4778999999999988765554 345689999987
No 189
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=78.41 E-value=1.7 Score=37.26 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=33.8
Q ss_pred CcEEEEEEe-cEEEEEEEecC-----------Ce------EEEEEeCCCCEEEEcCCCeEEEE
Q 027919 112 ATEIVFVLE-GQLDVGFFTTA-----------NV------LVSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 112 a~Ei~yVl~-G~~~~~~~~~~-----------~~------~~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
-.|.+|+++ .++.++|-... ++ .....+++||.+++|+|.+|.+.
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 379999999 55666654211 22 45678999999999999999865
No 190
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=76.97 E-value=1.9 Score=37.15 Aligned_cols=45 Identities=22% Similarity=0.385 Sum_probs=31.2
Q ss_pred CcEEEEEEec----EEEEEEEecC----------C----eEEEEEeCCCCEEEEcCCCeEEEE
Q 027919 112 ATEIVFVLEG----QLDVGFFTTA----------N----VLVSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 112 a~Ei~yVl~G----~~~~~~~~~~----------~----~~~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
-.|.+|+++. ++.++..... + -.....+++||.+++|+|.+|.+.
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 4899999995 3444421100 0 013678999999999999999864
No 191
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=75.19 E-value=8.8 Score=29.23 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=36.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFV 146 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~ 146 (217)
....+++|..+-.. ......+++|++|.+.+...+++|+. ....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 35677888765222 22247899999999999987666643 446789999884
No 192
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=74.94 E-value=10 Score=28.91 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=37.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~ 145 (217)
+....+++|..+-.-=.+ +..+.+|++|.+.+...+++|+. ....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 346678888764322223 47899999999999988766653 44579999987
No 193
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=74.76 E-value=12 Score=28.90 Aligned_cols=114 Identities=9% Similarity=0.055 Sum_probs=69.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEcC-
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNS- 171 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s- 171 (217)
....+++|..+-.--.+ ...+++|++|.+.+. .+++|+ .....+.+||++-.| ..+..... ++++++.+-..
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~~ 101 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIRN 101 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHHH
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHHH
Confidence 45678888765322223 478999999999995 444554 344678999988662 23344443 55666654221
Q ss_pred ------CCCccee----------------------------cch------hhhc--------CCCCCCHHHHHHHcCCCH
Q 027919 172 ------QLQGTQN----------------------------IAL------TLFA--------STPPVADNVLTKTFQIGT 203 (217)
Q Consensus 172 ------~~pg~~~----------------------------~~~------~~f~--------~~~~~p~~vla~af~~~~ 203 (217)
++|.... ++. .-++ ...+++.+.||...++++
T Consensus 102 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~sr 181 (220)
T 2fmy_A 102 FQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTR 181 (220)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSCH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCcH
Confidence 3443210 000 0001 012588999999999999
Q ss_pred HHHHHHHhhc
Q 027919 204 KEVEKIKSRL 213 (217)
Q Consensus 204 ~~v~~l~~~~ 213 (217)
+++.++.+++
T Consensus 182 ~tvsR~l~~l 191 (220)
T 2fmy_A 182 QTVSVLLNDF 191 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887765
No 194
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=74.73 E-value=19 Score=27.89 Aligned_cols=115 Identities=10% Similarity=0.005 Sum_probs=69.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEEc-
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFN- 170 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~~- 170 (217)
+....+++|..+-.--.+ ...+++|++|.+.+. .+++|+. ....+.+||++- ....+..... ++++++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 345678888765322223 478999999999996 5455653 346789999887 3333444443 5566665421
Q ss_pred ------CCCCccee----------------------------cchhh------hcC--------CCCCCHHHHHHHcCCC
Q 027919 171 ------SQLQGTQN----------------------------IALTL------FAS--------TPPVADNVLTKTFQIG 202 (217)
Q Consensus 171 ------s~~pg~~~----------------------------~~~~~------f~~--------~~~~p~~vla~af~~~ 202 (217)
.++|.... ++..+ ++. .-+++.+.||..+|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 13443210 00001 010 0147899999999999
Q ss_pred HHHHHHHHhhc
Q 027919 203 TKEVEKIKSRL 213 (217)
Q Consensus 203 ~~~v~~l~~~~ 213 (217)
.+++.++.+++
T Consensus 177 r~tvsR~l~~L 187 (222)
T 1ft9_A 177 RQTTSTALNSL 187 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998877765
No 195
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=74.54 E-value=8.7 Score=29.49 Aligned_cols=117 Identities=14% Similarity=0.060 Sum_probs=70.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEc---CC--CeEEEEecCCCcEEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFP---RG--LVHFQKNNGNVPASVIA 167 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P---~g--~~H~~~N~g~~~a~~l~ 167 (217)
....+++|...-..=.+ ...+++|++|.+.+...+++|+ .....+.+||++-.. .+ ..+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 45678888765332223 4789999999999998766664 345679999987321 12 2233333 35566665
Q ss_pred EEcC-------CCCccee----------------------------cchhhh-------cCCCCCCHHHHHHHcCCCHHH
Q 027919 168 GFNS-------QLQGTQN----------------------------IALTLF-------ASTPPVADNVLTKTFQIGTKE 205 (217)
Q Consensus 168 ~~~s-------~~pg~~~----------------------------~~~~~f-------~~~~~~p~~vla~af~~~~~~ 205 (217)
+-.. ++|.... ++..+. ....+++.+.||...|++++.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 4221 2343210 011110 001247899999999999999
Q ss_pred HHHHHhhc
Q 027919 206 VEKIKSRL 213 (217)
Q Consensus 206 v~~l~~~~ 213 (217)
+.++.+++
T Consensus 180 vsR~l~~l 187 (216)
T 4ev0_A 180 VSRVLHAL 187 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887765
No 196
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=74.20 E-value=7.5 Score=30.45 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=46.0
Q ss_pred CCCCCCCcEEEEEEecEEEEEEEecCC------eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEE
Q 027919 106 PHTHPRATEIVFVLEGQLDVGFFTTAN------VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 106 ~H~Hp~a~Ei~yVl~G~~~~~~~~~~~------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~ 168 (217)
+-+|+..+|.+.-+.|...+.++.+++ +.......+|+.+.+.+|++|.-.-.-+++..++++
T Consensus 71 lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 71 LERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 457888899999999986644443332 456789999999999999999854433456666654
No 197
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=73.94 E-value=10 Score=29.39 Aligned_cols=116 Identities=10% Similarity=0.128 Sum_probs=69.7
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEc-----CCCeEEEEecCCCcEEEEEE
Q 027919 95 RIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFP-----RGLVHFQKNNGNVPASVIAG 168 (217)
Q Consensus 95 ~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P-----~g~~H~~~N~g~~~a~~l~~ 168 (217)
...+++|..+-.--.+ ...+++|++|.+.+...+++|+. ....+.+||++-.. ....+..... +++.++.+
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 5678888765322222 47899999999999887666643 34579999987321 1222334443 45666554
Q ss_pred E-------cCCCCccee----------------------------cchhh------hc--------CCCCCCHHHHHHHc
Q 027919 169 F-------NSQLQGTQN----------------------------IALTL------FA--------STPPVADNVLTKTF 199 (217)
Q Consensus 169 ~-------~s~~pg~~~----------------------------~~~~~------f~--------~~~~~p~~vla~af 199 (217)
- -.++|.... ++..+ ++ -..+++.+.||...
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~lA~~l 187 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLV 187 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEECCCCHHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcCCCCHHHHHHHh
Confidence 2 223443210 00000 00 01258899999999
Q ss_pred CCCHHHHHHHHhhc
Q 027919 200 QIGTKEVEKIKSRL 213 (217)
Q Consensus 200 ~~~~~~v~~l~~~~ 213 (217)
+++++++.++.+++
T Consensus 188 g~sr~tvsR~l~~l 201 (227)
T 3d0s_A 188 GASRETVNKALADF 201 (227)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999998877765
No 198
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=72.83 E-value=10 Score=29.38 Aligned_cols=52 Identities=17% Similarity=0.114 Sum_probs=37.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFV 146 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~ 146 (217)
....+++|..+-..=.+ ...+++|++|.+.+...+++|+. ....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45678888765322222 47899999999999987766653 446799999884
No 199
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=72.48 E-value=12 Score=28.17 Aligned_cols=117 Identities=7% Similarity=0.005 Sum_probs=47.4
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEE-Ec---CCCeE--EEEecCCCcEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFV-FP---RGLVH--FQKNNGNVPASVI 166 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~-~P---~g~~H--~~~N~g~~~a~~l 166 (217)
....+++|...-.- ......+.+|++|.+.+...+++|+. ....+.+||++- +. .+.++ .... -+++.++
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a--~~~~~v~ 107 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQS--VENCELL 107 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEE--SSCEEEE
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEE--ECCEEEE
Confidence 45678888764221 22247899999999999987666653 345689999985 21 23233 3333 3556665
Q ss_pred EEEc-------CCCCccee----------------------------cchhhh---cCCCCCCHHHHHHHcCCCHHHHHH
Q 027919 167 AGFN-------SQLQGTQN----------------------------IALTLF---ASTPPVADNVLTKTFQIGTKEVEK 208 (217)
Q Consensus 167 ~~~~-------s~~pg~~~----------------------------~~~~~f---~~~~~~p~~vla~af~~~~~~v~~ 208 (217)
.+-. .++|.... ++..+. .-.-+++.+.||...|++++++.+
T Consensus 108 ~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~t~~~iA~~lG~sretlsR 187 (194)
T 3dn7_A 108 SITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQRVPQYLLASYLGFTPEYLSE 187 (194)
T ss_dssp EEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------------------------
T ss_pred EEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHHHCCHHHHHHHhCCCHHHHHH
Confidence 5421 12343210 000000 001147788888888888888888
Q ss_pred HHhhc
Q 027919 209 IKSRL 213 (217)
Q Consensus 209 l~~~~ 213 (217)
++++.
T Consensus 188 ~l~~l 192 (194)
T 3dn7_A 188 IRKKY 192 (194)
T ss_dssp -----
T ss_pred HHHhh
Confidence 87764
No 200
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=72.03 E-value=8.1 Score=29.59 Aligned_cols=49 Identities=18% Similarity=0.343 Sum_probs=35.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+.||..+-..=.+ +..+.+|++|++.+.. ++|+ ....+.+||.+
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 456778888865322223 4789999999999876 3455 46789999987
No 201
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=71.85 E-value=11 Score=28.99 Aligned_cols=119 Identities=8% Similarity=0.040 Sum_probs=70.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEc-----CCCeEEEEecCCCcEEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFP-----RGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P-----~g~~H~~~N~g~~~a~~l~ 167 (217)
....+++|...-..=.+ ...+.+|++|.+.+...+++|+. ....+.+||++.+. .+.++...-.-.++++++.
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~ 105 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWI 105 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEE
Confidence 45678888765322122 47899999999999987766653 34578999996322 2223322222235666665
Q ss_pred EEcC-------CCCcceec----------------------------ch------hhhc-CCCCCCHHHHHHHcCCCHHH
Q 027919 168 GFNS-------QLQGTQNI----------------------------AL------TLFA-STPPVADNVLTKTFQIGTKE 205 (217)
Q Consensus 168 ~~~s-------~~pg~~~~----------------------------~~------~~f~-~~~~~p~~vla~af~~~~~~ 205 (217)
+-.. .+|..... +. ...+ ..-+++.+.||..+|+++++
T Consensus 106 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 185 (220)
T 3dv8_A 106 IPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHREV 185 (220)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCHHH
T ss_pred EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCHHH
Confidence 4221 24422100 00 0011 00158889999999999999
Q ss_pred HHHHHhhc
Q 027919 206 VEKIKSRL 213 (217)
Q Consensus 206 v~~l~~~~ 213 (217)
+.++.+++
T Consensus 186 vsR~l~~L 193 (220)
T 3dv8_A 186 ITRMLRYF 193 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887765
No 202
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=71.82 E-value=11 Score=29.46 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=36.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFV 146 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 146 (217)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 456778888865333233 4789999999999988765554 3346799999873
No 203
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=71.76 E-value=3.3 Score=36.83 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=20.0
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEE
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
.....|++||.+++|+|.+|.+.
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 34678999999999999999865
No 204
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=71.47 E-value=13 Score=28.24 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=69.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEc----CC--CeEEEEecCCCcEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFP----RG--LVHFQKNNGNVPASVI 166 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P----~g--~~H~~~N~g~~~a~~l 166 (217)
....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++-.. .+ ..+.... .++++++
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a--~~~~~v~ 96 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVA 96 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEE--SSCEEEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEE--CCcEEEE
Confidence 35677888764322222 47899999999999987666653 34578999988422 12 2223333 3556666
Q ss_pred EEEc-------CCCCccee----------------------------cchhhh--cCC-----------CCCCHHHHHHH
Q 027919 167 AGFN-------SQLQGTQN----------------------------IALTLF--AST-----------PPVADNVLTKT 198 (217)
Q Consensus 167 ~~~~-------s~~pg~~~----------------------------~~~~~f--~~~-----------~~~p~~vla~a 198 (217)
.+-. .++|.... ++..+. ... -+++.+.||..
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~ 176 (210)
T 3ryp_A 97 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 176 (210)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHH
Confidence 5421 12443210 000000 000 14788999999
Q ss_pred cCCCHHHHHHHHhhc
Q 027919 199 FQIGTKEVEKIKSRL 213 (217)
Q Consensus 199 f~~~~~~v~~l~~~~ 213 (217)
.|++++++.++.+++
T Consensus 177 lg~sr~tvsR~l~~L 191 (210)
T 3ryp_A 177 VGCSRETVGRILKML 191 (210)
T ss_dssp HTCCHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHH
Confidence 999999999887765
No 205
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=70.91 E-value=11 Score=29.57 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=69.2
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEc-----CCCeEEEEecCCCcEEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFP-----RGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P-----~g~~H~~~N~g~~~a~~l~ 167 (217)
....+++|..+-..=.+ ...+++|++|.+.+...+++|+ .....+.+||++-.. ....+.... .+++.++.
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 111 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEA--VTPCEVMH 111 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEE--SSSEEEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEE--CCceEEEE
Confidence 45678888765322222 4789999999999998766665 344578999987321 112223333 34566655
Q ss_pred EEcC-------CCCccee----------------------------cchhhh--c--------CCCCCCHHHHHHHcCCC
Q 027919 168 GFNS-------QLQGTQN----------------------------IALTLF--A--------STPPVADNVLTKTFQIG 202 (217)
Q Consensus 168 ~~~s-------~~pg~~~----------------------------~~~~~f--~--------~~~~~p~~vla~af~~~ 202 (217)
+-.. ++|.+.. ++..+. . ..-++..+.||...|++
T Consensus 112 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~~~~~l~~t~~~iA~~lg~s 191 (237)
T 3fx3_A 112 IPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCDTGACEVTLPYDKMLIAGRLGMK 191 (237)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-----EEECCSCTHHHHHHTTCC
T ss_pred EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCCeEEEecCCHHHHHHHhCCC
Confidence 4211 2342110 000000 0 00135588999999999
Q ss_pred HHHHHHHHhhcC
Q 027919 203 TKEVEKIKSRLA 214 (217)
Q Consensus 203 ~~~v~~l~~~~~ 214 (217)
++.+.++.+++.
T Consensus 192 r~tvsR~l~~L~ 203 (237)
T 3fx3_A 192 PESLSRAFSRLK 203 (237)
T ss_dssp HHHHHHHHHHHG
T ss_pred HHHHHHHHHHHH
Confidence 999998887654
No 206
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=69.71 E-value=11 Score=28.73 Aligned_cols=114 Identities=16% Similarity=0.052 Sum_probs=64.3
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEE--cCCCeE--EEEecCCCcEEEEEEEcC
Q 027919 97 DYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVF--PRGLVH--FQKNNGNVPASVIAGFNS 171 (217)
Q Consensus 97 ~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~--P~g~~H--~~~N~g~~~a~~l~~~~s 171 (217)
.+++|..+-.--.+ +..+++|++|.+.+...+++|+ .....+.+||++=. -.+.++ .... .+++.++.+-..
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A--~~~~~v~~i~~~ 79 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEA--MTEAVVQGLEPR 79 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEE--SSSEEEEEECGG
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEE--CCcEEEEEEcHH
Confidence 45666643221122 4678999999999988766654 33567999998843 012222 3333 355666544211
Q ss_pred CC-Ccce----------------------------ecchhh------hcC-------CCCCCHHHHHHHcCCCHHHHHHH
Q 027919 172 QL-QGTQ----------------------------NIALTL------FAS-------TPPVADNVLTKTFQIGTKEVEKI 209 (217)
Q Consensus 172 ~~-pg~~----------------------------~~~~~~------f~~-------~~~~p~~vla~af~~~~~~v~~l 209 (217)
.- |.+. .++..+ ++. .-+++.+.||..++++.+++.++
T Consensus 80 ~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~ 159 (195)
T 3b02_A 80 AMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSKV 159 (195)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHHHHH
Confidence 11 3210 000111 110 11478899999999999998887
Q ss_pred Hhhc
Q 027919 210 KSRL 213 (217)
Q Consensus 210 ~~~~ 213 (217)
.+++
T Consensus 160 l~~L 163 (195)
T 3b02_A 160 LADL 163 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 207
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=69.67 E-value=9.7 Score=31.69 Aligned_cols=51 Identities=16% Similarity=0.221 Sum_probs=37.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
....+++|..+-.-=.+ ...+.+|++|.+.+...+.+|+.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 45678888754221122 4779999999999988776666566789999987
No 208
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=69.08 E-value=14 Score=29.73 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=70.1
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEcC----C--CeEEEEecCCCcEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFPR----G--LVHFQKNNGNVPASVI 166 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P~----g--~~H~~~N~g~~~a~~l 166 (217)
....+++|..+-.-=.+ ...+++|++|.+.+...+++|+. ....+.+||++-... . ....... .+++.++
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A--~~~~~l~ 146 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVA 146 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEE--SSCEEEE
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEE--CCCeEEE
Confidence 46678888865322223 47899999999999987666653 456789999884221 1 2223333 3456665
Q ss_pred EEEc-------CCCCccee----------------------------cchhhh--cCC-----------CCCCHHHHHHH
Q 027919 167 AGFN-------SQLQGTQN----------------------------IALTLF--AST-----------PPVADNVLTKT 198 (217)
Q Consensus 167 ~~~~-------s~~pg~~~----------------------------~~~~~f--~~~-----------~~~p~~vla~a 198 (217)
.+-. ..+|.... ++..+. ... -+++.+.||..
T Consensus 147 ~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~~ 226 (260)
T 3kcc_A 147 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 226 (260)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHHH
Confidence 5421 12443210 000000 000 14778999999
Q ss_pred cCCCHHHHHHHHhhc
Q 027919 199 FQIGTKEVEKIKSRL 213 (217)
Q Consensus 199 f~~~~~~v~~l~~~~ 213 (217)
.|++++++.++.+++
T Consensus 227 lG~sr~tvsR~l~~L 241 (260)
T 3kcc_A 227 VGCSRETVGRILKML 241 (260)
T ss_dssp HTCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999998887765
No 209
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=68.85 E-value=11 Score=29.79 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=46.5
Q ss_pred CCCCCCCCcEEEEEEecEEEEEEEecCC------eEEEEEeCCCCEEEEcCCCeEEEEecCCCcEEEEEEE
Q 027919 105 PPHTHPRATEIVFVLEGQLDVGFFTTAN------VLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 105 p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.+-+|+..+|.+.-+.|...+.++.+.+ +.......+|+.+.+.+|++|.-.-.-+++..++++-
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vvd 142 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVVD 142 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEEE
Confidence 3567888899999999986555443432 4567899999999999999996443334556665543
No 210
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=68.09 E-value=14 Score=29.22 Aligned_cols=118 Identities=11% Similarity=0.098 Sum_probs=71.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEEc---CCCe----EEEEecCCCcEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVFP---RGLV----HFQKNNGNVPAS 164 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~P---~g~~----H~~~N~g~~~a~ 164 (217)
+....+++|..+-.---+ ...+++|++|.+.+...+++|+. ....+.+||++-.. .+.+ ..... .+++.
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A--~~~~~ 119 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVA--FTPVE 119 (243)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--SSSEE
T ss_pred heeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--ccceE
Confidence 446778888865322223 47899999999999987766653 44679999987321 1211 22333 35666
Q ss_pred EEEEEc-------CCCCccee----------------------------cchhh------hc--------CCCCCCHHHH
Q 027919 165 VIAGFN-------SQLQGTQN----------------------------IALTL------FA--------STPPVADNVL 195 (217)
Q Consensus 165 ~l~~~~-------s~~pg~~~----------------------------~~~~~------f~--------~~~~~p~~vl 195 (217)
++.+-. .++|.+.. ++..+ ++ -.-.++.+.|
T Consensus 120 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~lt~~~l 199 (243)
T 3la7_A 120 LLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAI 199 (243)
T ss_dssp EEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEECSCCCHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEeccCCHHHH
Confidence 665421 23443210 00000 00 0125788999
Q ss_pred HHHcCCCHHHHHHHHhhc
Q 027919 196 TKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 196 a~af~~~~~~v~~l~~~~ 213 (217)
|..++++.+.+.++.+++
T Consensus 200 A~~lG~sr~tvsR~l~~L 217 (243)
T 3la7_A 200 AEAIGSTRVTVTRLLGDL 217 (243)
T ss_dssp HHHHTCCHHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHH
Confidence 999999999998887765
No 211
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=68.09 E-value=4.7 Score=29.08 Aligned_cols=52 Identities=12% Similarity=0.210 Sum_probs=33.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~ 145 (217)
+....+++|..+-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 346678888765332223 47899999999999865444432 24578999987
No 212
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=67.98 E-value=12 Score=29.54 Aligned_cols=71 Identities=7% Similarity=0.027 Sum_probs=44.0
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEE-EEeCCCCEEEEcC---CC----eEEEEecCCCcEEEE
Q 027919 95 RIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVS-KSIKKGENFVFPR---GL----VHFQKNNGNVPASVI 166 (217)
Q Consensus 95 ~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~-~~L~~GD~~~~P~---g~----~H~~~N~g~~~a~~l 166 (217)
...+++|..+-.- ......+++|++|.+.+...+++|+... ..+ +||++-... +. .+...... ++++++
T Consensus 20 ~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFNQ-WDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEECT-TCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEeC-CCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 4567788765221 2224788999999999988766665433 345 999885432 22 34555443 466666
Q ss_pred EE
Q 027919 167 AG 168 (217)
Q Consensus 167 ~~ 168 (217)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 213
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=67.76 E-value=17 Score=29.29 Aligned_cols=52 Identities=19% Similarity=0.288 Sum_probs=36.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC--eEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN--VLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~--~~~~~~L~~GD~~ 145 (217)
+....+.+|..+-..-.+ +..+.+|++|++.+.....+| +.....+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456778888765333233 478999999999998765444 2346689999988
No 214
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=67.55 E-value=8.7 Score=29.54 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=33.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+.||..+-..=.+ +.++.+|++|.+.+.. .+|+ ..++.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CCCe--EEEEcCCCEe
Confidence 345678888865322223 4789999999999863 3455 3479999987
No 215
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=66.55 E-value=15 Score=29.17 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=71.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEE--cCCCeEEEEecCCCcEEEEEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVF--PRGLVHFQKNNGNVPASVIAGF 169 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~--P~g~~H~~~N~g~~~a~~l~~~ 169 (217)
.....+++|..+-.--.+ ...+++|++|.+.+...+++|+. ....+.+||++-. .....+.... .++++++.+-
T Consensus 32 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred CeEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 345678888765332223 47899999999999987666653 3457999998842 2222233333 3456665531
Q ss_pred c-------CCCCcce----------------------------ecchhh------hcC--------CCCCCHHHHHHHcC
Q 027919 170 N-------SQLQGTQ----------------------------NIALTL------FAS--------TPPVADNVLTKTFQ 200 (217)
Q Consensus 170 ~-------s~~pg~~----------------------------~~~~~~------f~~--------~~~~p~~vla~af~ 200 (217)
. .++|... .++..+ ++. ..+++.+.||...|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 1244321 000000 110 12588999999999
Q ss_pred CCHHHHHHHHhhc
Q 027919 201 IGTKEVEKIKSRL 213 (217)
Q Consensus 201 ~~~~~v~~l~~~~ 213 (217)
++++++.++.+++
T Consensus 189 ~sr~tvsR~l~~L 201 (250)
T 3e6c_C 189 VHHVTVSRVLASL 201 (250)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999998887765
No 216
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=66.48 E-value=49 Score=26.58 Aligned_cols=109 Identities=15% Similarity=0.120 Sum_probs=65.2
Q ss_pred EEEEEEEcCCC-cCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCC----CC--EEEEcCCCeEEEEec-CCCcE
Q 027919 92 SLARIDYAPGG-INPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKK----GE--NFVFPRGLVHFQKNN-GNVPA 163 (217)
Q Consensus 92 s~~~~~l~PG~-~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~----GD--~~~~P~g~~H~~~N~-g~~~a 163 (217)
+....-+.++. ...+|.- +++|+++-..|.....+..++|+..+.+|.+ |+ -++||+|.+...+.. +++-.
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~ 158 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFD 158 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcc
Confidence 44445567775 4555554 4799999999965555666667666677765 55 478999999877654 33221
Q ss_pred --EEEEEEcCCCCcceecchhhhcCCCCCCHH-HHHHHcCCCHHHHHHHHh
Q 027919 164 --SVIAGFNSQLQGTQNIALTLFASTPPVADN-VLTKTFQIGTKEVEKIKS 211 (217)
Q Consensus 164 --~~l~~~~s~~pg~~~~~~~~f~~~~~~p~~-vla~af~~~~~~v~~l~~ 211 (217)
.+++.. --||+..-...+ .+.+ -|.+-|. ++.++.|+-
T Consensus 159 ~~tLVgCt--VaPGFdF~dFel------~~~~~~L~~~~P--~~~~~~l~~ 199 (203)
T 1xe7_A 159 NGFLISEV--VVPGFDFEDHTF------LKGEDELKHLVG--PEKAAELAF 199 (203)
T ss_dssp TCEEEEEE--ESSCCCGGGEEE------CCHHHHHHHHHC--HHHHHHTGG
T ss_pred cceEEEEE--ecCCccchhcEe------cCCcHHHHHHCC--HHHHHHHHH
Confidence 233322 246664432222 3445 5555665 677776653
No 217
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=65.98 E-value=11 Score=29.55 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=70.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEE----cCC--CeEEEEecCCCcEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVF----PRG--LVHFQKNNGNVPASV 165 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~----P~g--~~H~~~N~g~~~a~~ 165 (217)
+....+++|..+-.--.+ ...+++|++|.+.+...+++|+ .....+.+||++-. ... ..+..... +++++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 456778888865322223 4789999999999987665553 34457899998732 221 23344443 45555
Q ss_pred EEEEc-------CCCCccee----------------------------cchhhhc--CC------CCCCHHHHHHHcCCC
Q 027919 166 IAGFN-------SQLQGTQN----------------------------IALTLFA--ST------PPVADNVLTKTFQIG 202 (217)
Q Consensus 166 l~~~~-------s~~pg~~~----------------------------~~~~~f~--~~------~~~p~~vla~af~~~ 202 (217)
+.+-. .++|.+.. ++..+.. .. -.++.+.||...|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 55321 23442110 0111110 01 147899999999999
Q ss_pred HHHHHHHHhhc
Q 027919 203 TKEVEKIKSRL 213 (217)
Q Consensus 203 ~~~v~~l~~~~ 213 (217)
++.+.++.+++
T Consensus 200 r~tvsR~l~~l 210 (232)
T 1zyb_A 200 RLNISKTLNEL 210 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99998887765
No 218
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=65.50 E-value=11 Score=29.36 Aligned_cols=118 Identities=12% Similarity=0.059 Sum_probs=67.5
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEc-----CCCeEEEEecCCCcEEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFP-----RGLVHFQKNNGNVPASVI 166 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P-----~g~~H~~~N~g~~~a~~l 166 (217)
.....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-.. ....+.... .+++.++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIA--VENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEE--SSCEEEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEE--ecceEEE
Confidence 346778888865322223 4789999999999886654443 345689999987321 112333444 3456555
Q ss_pred EEEc-------CCCCcce----------------------------ecchhh------hc-------CCCCCCHHHHHHH
Q 027919 167 AGFN-------SQLQGTQ----------------------------NIALTL------FA-------STPPVADNVLTKT 198 (217)
Q Consensus 167 ~~~~-------s~~pg~~----------------------------~~~~~~------f~-------~~~~~p~~vla~a 198 (217)
.+-. .++|... .++..+ ++ -.-+++.+.||..
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 4321 1234210 000111 11 0125889999999
Q ss_pred cCCCHHHHHHHHhhc
Q 027919 199 FQIGTKEVEKIKSRL 213 (217)
Q Consensus 199 f~~~~~~v~~l~~~~ 213 (217)
.+++++.+.++.+++
T Consensus 190 lg~sr~tvsR~l~~l 204 (232)
T 2gau_A 190 SNMTVSNAIRTLSTF 204 (232)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999999887765
No 219
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=64.13 E-value=5.7 Score=35.81 Aligned_cols=21 Identities=19% Similarity=0.178 Sum_probs=19.0
Q ss_pred EEEeCCCCEEEEcCCCeEEEE
Q 027919 136 SKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 136 ~~~L~~GD~~~~P~g~~H~~~ 156 (217)
...|+|||.+++|+|.+|.+.
T Consensus 267 ~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred eEecCCCCEEecCCCCccccC
Confidence 467999999999999999875
No 220
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=63.71 E-value=13 Score=28.67 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=37.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~ 145 (217)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 346778888865332223 47889999999999887666653 34579999987
No 221
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=62.94 E-value=30 Score=29.42 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=42.7
Q ss_pred EEEcCCCcCCCC-CCCCCcEEE-EEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEe-c-CCCcEEEEEE
Q 027919 96 IDYAPGGINPPH-THPRATEIV-FVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKN-N-GNVPASVIAG 168 (217)
Q Consensus 96 ~~l~PG~~~p~H-~Hp~a~Ei~-yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N-~-g~~~a~~l~~ 168 (217)
++|+.|...... .=.+ .|+. +.+.|.+++.++ |+ ++.|..-|.+++|+|.-..... . +..++++...
T Consensus 62 l~L~~~~~~~~~~fl~~-rE~~iV~lgG~~~V~vd---g~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~ 132 (289)
T 1ywk_A 62 LEIILDKELGVDYFLER-RELGVINIGGPGFIEID---GA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFYIS 132 (289)
T ss_dssp EECCCSGGGTSSSTTTT-EEEEEEECSSCEEEEET---TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEE
T ss_pred EEcCCCceecccccCCC-cEEEEEEccCeEEEEEC---CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEE
Confidence 566666544333 2344 6665 467899999986 44 4589999999999996643333 2 2355665543
No 222
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=61.99 E-value=25 Score=25.39 Aligned_cols=48 Identities=17% Similarity=0.293 Sum_probs=33.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+.+|..+-.-=.+ ...+.+|++|.+.+... ++ ....+.+||.+
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~---~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN---NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEET---TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEC---CE-EEEEecCCCEe
Confidence 345778888765322223 48899999999999863 44 35679999986
No 223
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=60.63 E-value=18 Score=27.55 Aligned_cols=115 Identities=12% Similarity=0.092 Sum_probs=66.7
Q ss_pred EEEEcCCCcCCCCCCCCC--cEEEEEEecEEEEEEEecCCeE-EEEEeCCCCEEEE----cCCCeEEEEecCCCcEEEEE
Q 027919 95 RIDYAPGGINPPHTHPRA--TEIVFVLEGQLDVGFFTTANVL-VSKSIKKGENFVF----PRGLVHFQKNNGNVPASVIA 167 (217)
Q Consensus 95 ~~~l~PG~~~p~H~Hp~a--~Ei~yVl~G~~~~~~~~~~~~~-~~~~L~~GD~~~~----P~g~~H~~~N~g~~~a~~l~ 167 (217)
...+++|..+-.. .... ..+++|++|.+.+...+++|+. ....+.+||++-. .....+.... -++++++.
T Consensus 7 ~~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEE
T ss_pred EEEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEE
Confidence 4567777754221 1123 5689999999999887666653 3457999998743 1122333333 35666665
Q ss_pred EEcCC-CCccee----------------------------cchhhh------c-------CCCCCCHHHHHHHcCCCHHH
Q 027919 168 GFNSQ-LQGTQN----------------------------IALTLF------A-------STPPVADNVLTKTFQIGTKE 205 (217)
Q Consensus 168 ~~~s~-~pg~~~----------------------------~~~~~f------~-------~~~~~p~~vla~af~~~~~~ 205 (217)
+ ... .|.+.. ++..+. + ..-+++.+.||...+++.+.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 5 332 132100 000010 0 00147888999999999998
Q ss_pred HHHHHhhc
Q 027919 206 VEKIKSRL 213 (217)
Q Consensus 206 v~~l~~~~ 213 (217)
+.++.+++
T Consensus 163 vsR~l~~L 170 (202)
T 2zcw_A 163 VTKVIGEL 170 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877664
No 224
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=60.43 E-value=12 Score=26.54 Aligned_cols=48 Identities=13% Similarity=0.219 Sum_probs=32.5
Q ss_pred EEEEEEc-CCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYA-PGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~-PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+. +|..+-. -......+++|++|.+.+.. .+|+. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILE-DGQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEEC-TTCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEe-CCCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 3456777 7775422 22224678999999999874 34653 679999976
No 225
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=60.30 E-value=23 Score=30.93 Aligned_cols=52 Identities=10% Similarity=0.027 Sum_probs=36.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFV 146 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 146 (217)
+....+.+|..+-..=.+ ...+++|++|.+.+.... +|+ .....+.+||++=
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~~-~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVKC-DGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEEC-SSCEEEEEEEESCCEEC
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEec-CCCEEEEEEecCCCEEe
Confidence 456778888765333233 488999999999998743 443 3456799999773
No 226
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=59.80 E-value=24 Score=25.33 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=33.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVF 147 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~ 147 (217)
....+++|..+-.- ......+.+|++|.+.+... +. ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~---~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQD---DE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEET---TE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEEC---CE-EEEEecCCCEeCc
Confidence 35677888754222 22247999999999998762 22 4568999998843
No 227
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=59.65 E-value=26 Score=24.66 Aligned_cols=47 Identities=13% Similarity=0.191 Sum_probs=32.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
....+.+|..+-.- ......+.+|++|.+.+.- +|+ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 45678888754222 2224789999999999853 354 45689999987
No 228
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=56.68 E-value=20 Score=31.30 Aligned_cols=54 Identities=20% Similarity=0.057 Sum_probs=38.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe---EEEEEeCCCCEEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV---LVSKSIKKGENFVF 147 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~ 147 (217)
+....+++|..+-.- ...+..+++|++|.+.+...+.+|+ .....+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~~-Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQ-GDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeC-CCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 345678888764222 2224789999999999988765553 45678999998843
No 229
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=52.12 E-value=14 Score=25.96 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=31.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
....+++|..+-..-.+ ...+.+|++|.+.+...+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 45678888865322223 478999999999987542 2478999976
No 230
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=50.86 E-value=36 Score=27.29 Aligned_cols=48 Identities=17% Similarity=0.293 Sum_probs=34.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+++|..+-..=.+ +..+.+|++|++.+... |+ ....+.+||.+
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~---g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN---NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEET---TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEEC---Ce-EEEEcCCCCcc
Confidence 346678888765332223 47899999999998862 44 46789999987
No 231
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=50.68 E-value=27 Score=28.28 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=35.2
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEe-cCCe-EEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT-TANV-LVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~-~~~~-~~~~~L~~GD~~ 145 (217)
....+.+|..+-.---+ +..+.+|++|++.+.... .+|+ .....+.+||++
T Consensus 181 ~~~~~~~g~~I~~~G~~-~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGAR-GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTCE-ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCCC-CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 45677888754222122 478899999999998875 2343 345689999987
No 232
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=49.92 E-value=31 Score=26.43 Aligned_cols=49 Identities=24% Similarity=0.224 Sum_probs=34.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFV 146 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 146 (217)
+....+.||..+-.-=.+ ..++.+|++|++.+... |. ....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~---~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD---NT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS---SC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC---Ce-EEEEecCCCCcC
Confidence 445678888865322122 48999999999998853 33 456899999884
No 233
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=48.91 E-value=18 Score=31.47 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=26.1
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEEecCCCcEEE
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQKNNGNVPASV 165 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a~~ 165 (217)
.+..+=+|||.+++++|..|+..|.|-.-.+.
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~a 309 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIA 309 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEE
Confidence 44677899999999999999999998644433
No 234
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=44.70 E-value=26 Score=28.05 Aligned_cols=34 Identities=6% Similarity=0.071 Sum_probs=27.2
Q ss_pred cEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCC
Q 027919 113 TEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRG 150 (217)
Q Consensus 113 ~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 150 (217)
.-++|+++|++.+...+ + ....|.+||.+.+...
T Consensus 141 ~~~v~~l~G~~~v~~~~--~--~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISLQG--Q--PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEETT--E--EEEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEcCC--C--ceeecCCCCEEEEeCC
Confidence 67899999999987531 2 3678999999998765
No 235
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=43.65 E-value=35 Score=26.39 Aligned_cols=48 Identities=19% Similarity=0.212 Sum_probs=33.1
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
....+.+|..+-..--+ +..+.+|++|++.+...+ +. ....+.+||.+
T Consensus 149 ~~~~~~~g~~i~~~g~~-~~~~y~I~~G~v~v~~~~--~~-~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQ-GENFYLIEYGAVDVSKKG--QG-VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECEEEEEETT--TE-EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCc-CCEEEEEEecEEEEEEcC--Cc-eEEEcCCCCcc
Confidence 45677888764322223 488999999999988653 22 45689999977
No 236
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=41.56 E-value=51 Score=27.87 Aligned_cols=65 Identities=12% Similarity=0.066 Sum_probs=44.4
Q ss_pred ceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEE-------EEecCCC
Q 027919 90 GVSLARIDYAPGGINP-PHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHF-------QKNNGNV 161 (217)
Q Consensus 90 gis~~~~~l~PG~~~p-~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~-------~~N~g~~ 161 (217)
|.....+.+.||.... .-.|+. .|=+|+|+|.+ ..|+.++-|+|+.|. -. .++.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf-~Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRH-ITDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCE-EESS
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCc-CcCC
Confidence 4456678888886543 345776 66699999976 237888889999997 33 2256
Q ss_pred cEEEEEEEcCC
Q 027919 162 PASVIAGFNSQ 172 (217)
Q Consensus 162 ~a~~l~~~~s~ 172 (217)
.+.++.-.+.+
T Consensus 278 G~l~fvR~Dgd 288 (303)
T 2qdr_A 278 GGLFFVRVDRD 288 (303)
T ss_dssp CEEEEEEESSC
T ss_pred ceEEEEEeCcc
Confidence 67676655544
No 237
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=40.74 E-value=48 Score=28.04 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=36.2
Q ss_pred CCCcEEE-EEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEEEEe-c-CCCcEEEEEE
Q 027919 110 PRATEIV-FVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKN-N-GNVPASVIAG 168 (217)
Q Consensus 110 p~a~Ei~-yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N-~-g~~~a~~l~~ 168 (217)
.+ .|+. +.+.|..++.++ |+ ++.|..-|.+++|+|.-..... . +..++++...
T Consensus 77 ~~-rE~~iV~l~G~~~V~vd---G~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~ 132 (282)
T 1xru_A 77 ER-RELGVINIGGAGTITVD---GQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYN 132 (282)
T ss_dssp TT-EEEEEEECSSCEEEEET---TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEE
T ss_pred CC-cEEEEEEccCeEEEEEC---CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEE
Confidence 44 6665 567899999986 44 4589999999999998543333 2 2345666543
No 238
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=40.66 E-value=29 Score=26.90 Aligned_cols=48 Identities=15% Similarity=0.087 Sum_probs=33.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFV 146 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 146 (217)
....+++|..+-.-=.+ +..+.+|++|.+.+... ++ ....+.+||.+=
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~---~~-~~~~~~~g~~fG 78 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN---DN-KVNSSGPGSSFG 78 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST---TS-CCEEECTTCEEC
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC---CE-EEEecCCCCeee
Confidence 46678888764322233 48999999999998853 33 246899999883
No 239
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=40.45 E-value=47 Score=25.03 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=36.8
Q ss_pred CCCCCCCCCcEEEEEEecEEEEEEEecC--------------------C-eEEEEEeCCCCEEEEcCCCeEEEE
Q 027919 104 NPPHTHPRATEIVFVLEGQLDVGFFTTA--------------------N-VLVSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 104 ~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~--------------------~-~~~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
..+-.|.+-..+-|+++|+=.+++.... + ......|++|+.++|-++.+|.-.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 3455666668899999997776665311 0 112467899999999999999854
No 240
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=40.44 E-value=48 Score=29.07 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=51.7
Q ss_pred EEEeCC---------CCEEEEcCCCeEEEEecCCCcEEEEEEEcCCCCc-------------c----------eecc---
Q 027919 136 SKSIKK---------GENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQG-------------T----------QNIA--- 180 (217)
Q Consensus 136 ~~~L~~---------GD~~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg-------------~----------~~~~--- 180 (217)
..+|++ ||+.+-|+-.+|.+.-.++.|+++++.-...+-. + ...+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 456777 9999999999999999999999998765433310 0 0000
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027919 181 LTLFASTPPVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 181 ~~~f~~~~~~p~~vla~af~~~~~~v~~l~ 210 (217)
...+ .+..++.+-|++..|+.++.+..+-
T Consensus 236 R~ar-~ReglTQ~~LAe~TGIPq~hISeMe 264 (443)
T 3g7d_A 236 DLFL-ARRAHTRTSAAEAAGVPPADLEAAL 264 (443)
T ss_dssp HHHH-HHTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHH-HhcCCCHHHHHHHhCCCHHHHHHHh
Confidence 1111 1236888889999999988886654
No 241
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=39.85 E-value=46 Score=26.84 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=34.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFV 146 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 146 (217)
+....+++|..+-..=.+ +..+.+|++|.+.+.. +|+ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---TTE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---CCE-EEEEeCCCCeee
Confidence 446778888865333233 4789999999999854 344 457899999873
No 242
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=38.09 E-value=9.2 Score=29.58 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=67.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCe-EEEEEeCCCCEEEEcC---CCe---EEEEecCCCcEEEE
Q 027919 94 ARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANV-LVSKSIKKGENFVFPR---GLV---HFQKNNGNVPASVI 166 (217)
Q Consensus 94 ~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~---g~~---H~~~N~g~~~a~~l 166 (217)
....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-... +.+ +..... +++.++
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 109 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQLF 109 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEEEE
Confidence 45677787764322223 4789999999999887655443 2335688999874321 222 233333 445555
Q ss_pred EEE-------cCCCCccee----------------------------cchhh---hc--------CCCCCCHHHHHHHcC
Q 027919 167 AGF-------NSQLQGTQN----------------------------IALTL---FA--------STPPVADNVLTKTFQ 200 (217)
Q Consensus 167 ~~~-------~s~~pg~~~----------------------------~~~~~---f~--------~~~~~p~~vla~af~ 200 (217)
.+- -..+|.... ++..+ .. ..-+++.+.||...|
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~lg 189 (227)
T 3dkw_A 110 RFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLS 189 (227)
T ss_dssp EEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHTT
T ss_pred EEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHhC
Confidence 431 123453210 01111 00 112577899999999
Q ss_pred CCHHHHHHHHhhc
Q 027919 201 IGTKEVEKIKSRL 213 (217)
Q Consensus 201 ~~~~~v~~l~~~~ 213 (217)
++++++.++.+++
T Consensus 190 ~sr~tvsR~l~~l 202 (227)
T 3dkw_A 190 IQPETFSRIMHRL 202 (227)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999998887765
No 243
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=36.06 E-value=34 Score=31.57 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=25.4
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEEecCCCcE
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQKNNGNVPA 163 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a 163 (217)
.+..+=++||.+++++|..|+..|.|-.-.
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n 366 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNN 366 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeee
Confidence 346788999999999999999999996433
No 244
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=33.42 E-value=41 Score=30.88 Aligned_cols=80 Identities=20% Similarity=0.225 Sum_probs=49.5
Q ss_pred cCCcCCCCcCceEEEEEEEcCCCcCCCCCCCC-CcEEEEEEecEEEEEEEecC---------------------------
Q 027919 80 VQTIPGLNTLGVSLARIDYAPGGINPPHTHPR-ATEIVFVLEGQLDVGFFTTA--------------------------- 131 (217)
Q Consensus 80 ~~~~Pgl~~~gis~~~~~l~PG~~~p~H~Hp~-a~Ei~yVl~G~~~~~~~~~~--------------------------- 131 (217)
-..+||.|+.-+.+ -.+|...++|.-.. -.-+-|-+-|.-..++.-+.
T Consensus 228 ~~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe 303 (510)
T 4ask_A 228 GHTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILD 303 (510)
T ss_dssp SSCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHH
T ss_pred CCcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHH
Confidence 45788888774332 35677777775321 23444444443333222111
Q ss_pred -----C-eEEEEEeCCCCEEEEcCCCeEEEEecCCCcE
Q 027919 132 -----N-VLVSKSIKKGENFVFPRGLVHFQKNNGNVPA 163 (217)
Q Consensus 132 -----~-~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~a 163 (217)
| ..+..+=++||.+++++|..|+..|.|-..-
T Consensus 304 ~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~n 341 (510)
T 4ask_A 304 DLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNN 341 (510)
T ss_dssp HHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred HHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeee
Confidence 1 2346778999999999999999999985433
No 245
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=32.68 E-value=65 Score=28.01 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=33.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC------Ce-EEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA------NV-LVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~------~~-~~~~~L~~GD~~ 145 (217)
+....+.+|..+-.-=.+ +..+++|++|++.+.....+ |+ .....+.+||.|
T Consensus 290 l~~~~~~~Ge~I~~eGd~-~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGDL-ADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 345677888754222123 48899999999999865432 22 235679999987
No 246
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=32.64 E-value=8.8 Score=27.12 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=28.6
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEE-EE--EeCCCCEE
Q 027919 96 IDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLV-SK--SIKKGENF 145 (217)
Q Consensus 96 ~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~-~~--~L~~GD~~ 145 (217)
..+++|..+-. -......+.+|++|++.+. ...+|+.. .. .+.+||.+
T Consensus 32 ~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 45566654321 1222478999999999965 33344321 12 78899976
No 247
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=30.85 E-value=86 Score=30.53 Aligned_cols=54 Identities=20% Similarity=0.110 Sum_probs=37.4
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecC---CeEEEEEeCCCCEEE
Q 027919 92 SLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA---NVLVSKSIKKGENFV 146 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~---~~~~~~~L~~GD~~~ 146 (217)
.|....+++|..+=--=.+ ++.+++|++|++.+.+.++. .......+.+||.|-
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 4566778888764222245 48999999999999886432 233456899999873
No 248
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=30.34 E-value=68 Score=27.40 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=32.2
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCC--eEEEEEeCCCCEE
Q 027919 96 IDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTAN--VLVSKSIKKGENF 145 (217)
Q Consensus 96 ~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~--~~~~~~L~~GD~~ 145 (217)
..+.+|..+-.-=.+ +..+.+|++|++.+.....++ ......+.+||.|
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 445666544222223 478999999999998764333 2235689999987
No 249
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=28.37 E-value=97 Score=26.76 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=32.5
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 96 IDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 96 ~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
..+++|..+-..=.+ +..+++|++|++.+... ++.....+.+||.+
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~---~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc---CCeeEEEecCCCEE
Confidence 467888765322233 48899999999998864 22246689999977
No 250
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=27.90 E-value=71 Score=26.31 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=23.6
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEE-ecCCCcE
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQK-NNGNVPA 163 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~-N~g~~~a 163 (217)
.....+++||++++...++|.-. |.++.+-
T Consensus 215 ~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R 245 (308)
T 2a1x_A 215 RVHLVMEKGDTVFFHPLLIHGSGQNKTQGFR 245 (308)
T ss_dssp CEEECBCTTCEEEECTTCCEEECCBCSSSCE
T ss_pred eEEccCCCccEEEECCCccccCCCCCCCCce
Confidence 35678999999999999999865 6554443
No 251
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=27.06 E-value=57 Score=27.92 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=35.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEE
Q 027919 93 LARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENF 145 (217)
Q Consensus 93 ~~~~~l~PG~~~p~H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 145 (217)
+....+++|..+-..=.+ +..+.+|++|.+.+... ++ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~---~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN---GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET---TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC---Ce-EeeeCCCCCEE
Confidence 456778888865433334 48899999999999863 44 35679999986
No 252
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=26.18 E-value=54 Score=26.70 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=22.9
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEE-ecCCC
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQK-NNGNV 161 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~-N~g~~ 161 (217)
.....+++||++++...++|.-. |.++.
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~ 255 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDR 255 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSS
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCC
Confidence 35678999999999999999865 66643
No 253
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=23.83 E-value=55 Score=18.71 Aligned_cols=21 Identities=10% Similarity=0.282 Sum_probs=17.3
Q ss_pred CCHHHHHHHcCCCHHHHHHHH
Q 027919 190 VADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 190 ~p~~vla~af~~~~~~v~~l~ 210 (217)
++++--.+.|+++.++..+|.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 467788899999999988764
No 254
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=22.75 E-value=90 Score=17.17 Aligned_cols=26 Identities=4% Similarity=-0.008 Sum_probs=22.4
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027919 189 PVADNVLTKTFQIGTKEVEKIKSRLA 214 (217)
Q Consensus 189 ~~p~~vla~af~~~~~~v~~l~~~~~ 214 (217)
+++..-+++.++++..+|.+..+.+.
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 68888999999999999998876653
No 255
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=22.39 E-value=84 Score=25.84 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=21.3
Q ss_pred EEEEEeCCCCEEEEcCCCeEEEE-ec
Q 027919 134 LVSKSIKKGENFVFPRGLVHFQK-NN 158 (217)
Q Consensus 134 ~~~~~L~~GD~~~~P~g~~H~~~-N~ 158 (217)
.....+++||++++...++|.-. |.
T Consensus 219 ~v~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp CEEECBCTTEEEEEETTSEEEECCBC
T ss_pred eeEeeeCCceEEEEeCCceeeCCCCC
Confidence 35678999999999999999765 66
No 256
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=22.00 E-value=62 Score=18.71 Aligned_cols=22 Identities=9% Similarity=0.208 Sum_probs=18.7
Q ss_pred CCCHHHHHHHcCCCHHHHHHHH
Q 027919 189 PVADNVLTKTFQIGTKEVEKIK 210 (217)
Q Consensus 189 ~~p~~vla~af~~~~~~v~~l~ 210 (217)
-++++--.+.|+++.++..+|.
T Consensus 2 yLsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 2 YLSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCCHHHHHHHHSSCHHHHHHSC
T ss_pred CCCHHHHHHHHCcCHHHHHHCh
Confidence 3778889999999999988764
No 257
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=21.88 E-value=1e+02 Score=27.97 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=35.9
Q ss_pred EEEEcCCCcCCCCCCCC-CcEEEEEEecEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeEE
Q 027919 95 RIDYAPGGINPPHTHPR-ATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHF 154 (217)
Q Consensus 95 ~~~l~PG~~~p~H~Hp~-a~Ei~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~ 154 (217)
|.+..|+...+|-+|.+ .+|+++.+.|..... ..-+.+|.+-.-|.+.+|.
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak---------~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAK---------QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC-----------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhcccccccc---------ccCcCCCceeccCCCcCCC
Confidence 55777888888877743 479999999985433 1248999999999999995
No 258
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=21.81 E-value=1.1e+02 Score=25.03 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=37.9
Q ss_pred EEEEEEEcCCCcCCCCCCCCC------------cEEEEEEe------cEEEEEEEecCCeEEEEEeCCCCEEEEcCCCeE
Q 027919 92 SLARIDYAPGGINPPHTHPRA------------TEIVFVLE------GQLDVGFFTTANVLVSKSIKKGENFVFPRGLVH 153 (217)
Q Consensus 92 s~~~~~l~PG~~~p~H~Hp~a------------~Ei~yVl~------G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H 153 (217)
.+....+.+|+...+|.-... +=++|.-+ |+..+.- . ........++|++++||.+.+|
T Consensus 100 ~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~--~-~~~~~V~P~~G~~v~F~s~~lH 176 (243)
T 3dkq_A 100 PPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQD--T-YGQQSIKLSAGSLVLYPSSSLH 176 (243)
T ss_dssp EEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEE--T-TEEEEECCCTTCEEEEETTSEE
T ss_pred cceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEee--C-CCcEEEecCCCEEEEECCCCeE
Confidence 355667889988888854310 11122222 3333331 1 1124567899999999999999
Q ss_pred EEEe
Q 027919 154 FQKN 157 (217)
Q Consensus 154 ~~~N 157 (217)
...-
T Consensus 177 ~v~p 180 (243)
T 3dkq_A 177 QVTP 180 (243)
T ss_dssp EECC
T ss_pred cCcc
Confidence 8754
No 259
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=21.60 E-value=88 Score=27.04 Aligned_cols=22 Identities=18% Similarity=0.356 Sum_probs=19.5
Q ss_pred EEEEeCCCCEEEEcCCCeEEEE
Q 027919 135 VSKSIKKGENFVFPRGLVHFQK 156 (217)
Q Consensus 135 ~~~~L~~GD~~~~P~g~~H~~~ 156 (217)
....+++||+++|...++|.-.
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 3457899999999999999887
No 260
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.29 E-value=66 Score=22.20 Aligned_cols=30 Identities=20% Similarity=0.439 Sum_probs=24.5
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027919 181 LTLFASTPPVADNVLTKTFQIGTKEVEKIKSRL 213 (217)
Q Consensus 181 ~~~f~~~~~~p~~vla~af~~~~~~v~~l~~~~ 213 (217)
-.+|- .+++|+|..-|+++.-+++|+++-.
T Consensus 47 G~lL~---~L~ee~L~edf~ls~Lq~kKi~~fI 76 (84)
T 2dkz_A 47 GNLLV---QLTEEILSEDFKLSKLQVKKIMQFI 76 (84)
T ss_dssp HHHHH---HCCHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hHHHH---hCCHHHHHhhcCCCHHHHHHHHHHH
Confidence 34555 5899999999999999999988643
Done!