Query 027923
Match_columns 217
No_of_seqs 121 out of 1084
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:59:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.6 0.2 6.9E-06 42.4 12.3 89 32-128 281-384 (403)
2 4dzg_A PLIG; lysozyme inhibito 94.1 0.07 2.4E-06 37.2 4.6 69 34-109 23-94 (114)
3 2d7n_A Filamin-C; beta-sandwic 93.1 0.52 1.8E-05 31.4 7.5 54 68-121 22-78 (93)
4 3rgh_A Filamin-A; cell adhesio 93.1 1.2 4E-05 29.9 9.4 45 67-111 38-85 (100)
5 2dmb_A Filamin-B; beta-sandwic 92.9 1.1 3.7E-05 31.4 9.4 55 67-121 42-99 (124)
6 2d7m_A Filamin-C; beta-sandwic 92.9 1.1 3.9E-05 30.7 9.3 55 67-121 43-100 (115)
7 3cnk_A Filamin-A; FLNA24, X-RA 92.9 0.99 3.4E-05 29.4 8.6 44 68-111 30-76 (89)
8 2dj4_A Filamin-B; beta-sandwic 92.6 1 3.5E-05 30.6 8.7 55 67-121 42-99 (108)
9 2ee9_A Filamin-B; beta-sandwic 92.4 0.55 1.9E-05 31.4 6.8 46 67-112 29-77 (95)
10 2ee6_A Filamin-B; beta-sandwic 91.7 1 3.5E-05 30.4 7.7 54 67-121 41-96 (105)
11 2d7p_A Filamin-C; beta-sandwic 91.6 1.7 5.7E-05 29.9 8.8 53 68-120 41-96 (112)
12 1v05_A Filamin C; actin-bindin 91.4 1.6 5.5E-05 28.8 8.4 45 67-111 36-83 (96)
13 2e9j_A Filamin-B; beta-sandwic 91.0 1.1 3.7E-05 31.1 7.5 55 67-121 53-110 (119)
14 2w0p_A Filamin-A; alternative 90.9 1.9 6.6E-05 28.3 8.3 52 69-121 35-88 (94)
15 2dia_A Filamin-B; beta-sandwic 90.5 2.2 7.5E-05 29.1 8.6 57 67-123 41-100 (113)
16 2nqc_A Filamin-C; immunoglobul 90.1 3.9 0.00013 29.2 10.3 55 67-122 75-131 (138)
17 2eea_A Filamin-B; beta-sandwic 89.7 3.6 0.00012 28.1 9.6 55 67-122 51-107 (115)
18 2dlg_A Filamin-B; beta-sandwic 89.3 1.2 4.2E-05 30.0 6.4 46 67-112 30-78 (102)
19 2dmc_A Filamin-B; beta-sandwic 89.1 0.59 2E-05 32.4 4.7 72 47-121 27-101 (116)
20 2bp3_A Filamin A; structural p 89.0 3.5 0.00012 27.2 9.3 55 67-122 36-92 (97)
21 2p9r_A Alpha-2-M, alpha-2-macr 88.5 3.9 0.00013 27.1 8.9 62 48-109 14-84 (102)
22 4g9s_B Inhibitor of G-type lys 88.5 1.1 3.8E-05 30.7 5.7 72 30-109 17-91 (111)
23 2dic_A Filamin-B; beta-sandwic 88.3 4.3 0.00015 27.3 8.6 43 68-111 42-86 (105)
24 2k9u_A Gamma filamin; cytoskel 87.4 5.4 0.00018 27.4 10.4 54 67-121 48-103 (119)
25 2dib_A Filamin-B; beta-sandwic 87.2 1.4 4.6E-05 30.9 5.7 55 67-121 56-113 (128)
26 4b7l_A Filamin-B; structural p 85.5 3.6 0.00012 34.1 8.3 79 30-111 247-335 (347)
27 2di8_A Filamin-B; beta-sandwic 85.0 7.1 0.00024 26.5 8.9 55 68-123 42-98 (111)
28 2ds4_A Tripartite motif protei 84.6 7.1 0.00024 26.2 10.1 74 49-122 26-108 (113)
29 2eec_A Filamin-B; beta-sandwic 84.4 8.3 0.00028 26.8 9.3 65 57-123 42-108 (125)
30 3osv_A Flagellar basal-BODY RO 83.2 7 0.00024 27.7 8.0 55 51-109 24-89 (138)
31 2di9_A Filamin-B; beta-sandwic 82.8 10 0.00034 26.5 10.0 53 68-121 62-116 (131)
32 2k7p_A Filamin-A; IG-like, ABP 82.8 13 0.00043 27.7 9.8 44 67-111 127-172 (188)
33 2d7o_A Filamin-C; beta-sandwic 82.5 4.1 0.00014 27.7 6.2 55 68-123 42-98 (111)
34 3c12_A FLGD, flagellar protein 81.2 10 0.00035 26.8 8.2 52 53-109 29-91 (138)
35 3d33_A Domain of unknown funct 81.1 9.2 0.00031 26.0 7.5 55 50-110 37-96 (108)
36 2k7q_A Filamin-A; IG-like, ABP 79.0 11 0.00036 28.2 8.1 44 67-111 127-172 (191)
37 1wlh_A Gelation factor; ABP-12 76.5 19 0.00064 28.9 9.5 44 68-112 234-280 (311)
38 2k7p_A Filamin-A; IG-like, ABP 76.4 7.6 0.00026 29.0 6.6 43 69-111 35-80 (188)
39 3sd2_A Putative member of DUF3 74.5 14 0.00047 24.8 6.6 70 31-110 18-90 (101)
40 1qfh_A Protein (gelation facto 73.7 24 0.00083 26.5 9.0 45 67-112 134-181 (212)
41 4fxk_A Complement C4 beta chai 71.5 45 0.0015 29.5 11.5 82 30-111 110-202 (656)
42 2j3s_A Filamin-A; cytoskeleton 70.4 26 0.00088 27.8 8.8 44 67-111 227-272 (288)
43 3irp_X URO-adherence factor A; 67.2 9.6 0.00033 32.6 5.7 44 67-110 329-372 (429)
44 3isy_A Bsupi, intracellular pr 65.4 31 0.0011 23.8 7.8 19 67-85 41-59 (120)
45 1jcd_A Major outer membrane li 65.3 18 0.00061 21.1 6.2 43 142-184 5-47 (52)
46 2k8e_A UPF0339 protein YEGP; p 64.9 25 0.00085 24.7 6.6 62 47-111 11-90 (130)
47 3c75_A Amicyanin; copper prote 62.6 27 0.00091 24.3 6.6 19 89-107 101-119 (132)
48 2k7q_A Filamin-A; IG-like, ABP 60.6 23 0.00079 26.2 6.3 45 67-111 30-77 (191)
49 1wlh_A Gelation factor; ABP-12 59.6 20 0.00069 28.7 6.2 44 68-111 143-189 (311)
50 1qfh_A Protein (gelation facto 59.4 20 0.00069 27.0 5.9 44 68-111 44-90 (212)
51 3jqw_A COLH protein, collagena 57.2 44 0.0015 23.0 9.9 68 37-109 35-103 (121)
52 3gf8_A Putative polysaccharide 55.6 20 0.00068 28.8 5.5 67 42-108 4-82 (296)
53 3hd7_B Syntaxin-1A; membrane p 55.5 44 0.0015 22.4 9.2 21 140-160 20-40 (109)
54 3hrz_A Cobra venom factor; ser 55.2 50 0.0017 29.4 8.5 61 50-110 118-182 (627)
55 1gl2_D Syntaxin 8, vesicle tra 53.9 33 0.0011 20.6 6.2 45 141-185 9-53 (65)
56 2j3s_A Filamin-A; cytoskeleton 51.9 86 0.0029 24.7 9.3 42 69-111 38-81 (288)
57 2nps_D Syntaxin-6; vesicle fus 49.5 47 0.0016 21.0 6.6 46 140-185 18-63 (82)
58 3pay_A Putative adhesin; struc 49.1 25 0.00087 28.5 5.1 64 43-107 6-81 (314)
59 2hr0_A Complement C3 beta chai 45.0 1.6E+02 0.0056 26.0 12.1 62 49-110 119-189 (645)
60 2pn5_A TEP1R, thioester-contai 43.9 2.4E+02 0.0081 27.5 11.9 62 49-110 113-184 (1325)
61 3hd7_A Vesicle-associated memb 43.0 66 0.0023 20.8 9.8 33 155-187 33-65 (91)
62 2r5o_A Putative ATP binding co 42.1 27 0.00092 25.8 4.0 39 47-85 66-104 (188)
63 1kd8_B GABH BLL, GCN4 acid bas 41.7 39 0.0013 17.9 4.1 26 143-168 3-28 (36)
64 3c3f_A Alpha/beta peptide with 38.8 43 0.0015 17.5 4.1 26 143-168 3-28 (34)
65 1sfc_D Protein (SNAP-25B), pro 38.1 78 0.0027 20.2 6.2 47 140-186 28-74 (87)
66 3swy_A Cyclic nucleotide-gated 37.4 56 0.0019 18.4 5.7 13 145-157 9-21 (46)
67 1qle_D Cytochrome AA3, ccytoch 36.9 55 0.0019 18.2 4.4 25 177-201 16-40 (43)
68 3fn2_A Putative sensor histidi 36.8 54 0.0019 21.9 4.2 39 71-109 51-92 (106)
69 1n7s_D SNAP-25A; neuronal snar 36.8 68 0.0023 19.2 6.2 47 140-186 9-55 (66)
70 3ogl_Q JAZ1 incomplete degron 36.6 13 0.00044 17.4 0.8 10 206-215 9-18 (21)
71 3swf_A CGMP-gated cation chann 35.5 81 0.0028 19.7 5.1 20 143-162 9-28 (74)
72 3hd7_A Vesicle-associated memb 35.3 90 0.0031 20.1 7.3 26 147-172 32-57 (91)
73 1gd2_E Transcription factor PA 34.6 77 0.0026 19.6 4.5 34 139-172 27-60 (70)
74 1m56_D Cytochrome C oxidase; m 33.9 70 0.0024 18.5 4.9 25 177-201 24-48 (51)
75 4hci_A Cupredoxin 1; structura 33.0 58 0.002 20.9 4.1 18 90-107 68-85 (100)
76 2b39_A C3; thioester, immune d 32.9 92 0.0031 31.3 7.1 60 50-109 141-209 (1661)
77 1uo4_A General control protein 32.7 57 0.0019 17.0 4.1 26 143-168 3-28 (34)
78 2r2v_A GCN4 leucine zipper; co 31.0 61 0.0021 16.9 4.1 25 144-168 4-28 (34)
79 3prx_B Cobra venom factor; imm 30.9 1.7E+02 0.0057 29.6 8.5 60 50-109 140-203 (1642)
80 1l4a_D S-SNAP25 fusion protein 30.9 1E+02 0.0035 19.7 4.9 45 141-185 30-74 (87)
81 3bid_A UPF0339 protein NMB1088 30.0 89 0.0031 18.8 4.2 18 69-86 12-29 (64)
82 2x5p_A FBA2, fibronectin bindi 29.3 1.4E+02 0.0047 20.4 6.7 55 69-126 44-98 (121)
83 1wmd_A Protease; alpha-beta hy 27.9 2.6E+02 0.0089 23.2 9.3 41 69-109 367-418 (434)
84 1kd8_A GABH AIV, GCN4 acid bas 27.6 74 0.0025 16.8 4.2 26 143-168 3-28 (36)
85 3cu7_A Complement C5; Mg domai 27.3 1.5E+02 0.005 29.9 7.4 62 49-110 137-206 (1676)
86 2q0z_X Protein Pro2281; SEC63, 27.2 2.4E+02 0.0084 22.6 12.8 97 26-128 217-330 (339)
87 1iq6_A (R)-hydratase, (R)-spec 27.1 1.4E+02 0.0048 19.8 6.5 44 41-84 82-126 (134)
88 2wy3_B UL16, uncharacterized p 26.9 93 0.0032 21.4 4.2 38 41-83 37-74 (158)
89 2yko_A LINE-1 ORF1P; RNA-bindi 26.2 2.1E+02 0.0073 22.1 6.6 24 142-165 7-30 (233)
90 2pnv_A Small conductance calci 25.6 93 0.0032 17.2 3.4 20 144-163 19-38 (43)
91 3ogk_Q JAZ1 incomplete degron 25.1 22 0.00075 16.8 0.6 10 206-215 4-13 (22)
92 2akf_A Coronin-1A; coiled coil 25.0 74 0.0025 15.9 4.3 17 145-161 3-19 (32)
93 1dip_A Delta-sleep-inducing pe 24.0 1.4E+02 0.0047 18.6 4.4 31 140-170 14-44 (78)
94 3b5n_D Protein transport prote 23.7 1.3E+02 0.0043 18.1 6.2 46 141-186 10-55 (64)
95 2bni_A General control protein 23.4 89 0.0031 16.3 4.1 25 144-168 4-28 (34)
96 1q6w_A Monoamine oxidase regul 23.3 1.9E+02 0.0065 20.0 7.1 44 41-84 101-148 (161)
97 3afg_A Subtilisin-like serine 23.0 3.7E+02 0.013 23.3 11.1 42 68-109 459-502 (539)
98 1nqj_A Class 1 collagenase; be 23.0 1.8E+02 0.0063 19.8 9.0 66 38-109 38-106 (119)
99 2wq1_A General control protein 22.6 92 0.0031 16.1 4.0 25 144-168 3-27 (33)
100 3l4f_A RHO guanine nucleotide 22.3 1.4E+02 0.0046 17.9 7.0 40 145-184 4-46 (61)
101 2lif_A Core protein P21; signa 27.8 19 0.00064 18.0 0.0 20 12-31 5-24 (27)
102 3lbe_A Putative uncharacterize 21.8 2.2E+02 0.0075 20.1 9.7 42 42-84 108-149 (163)
103 3f5o_A Thioesterase superfamil 20.6 2.1E+02 0.0071 19.5 9.0 74 6-84 54-131 (148)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.55 E-value=0.2 Score=42.39 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=58.4
Q ss_pred EEEEcCCCcceEeeecc-CCcEEEEEEEEeeCCCCCCceEEEEEE-C----CC---CC--eeeeeecc-c---cceEEEE
Q 027923 32 WLNLPATGTKCVSEEIQ-NNVVVLADYVVVSDDHSHSPTISVKVT-S----PY---GN--NLHNRENV-T---YGQFAFT 96 (217)
Q Consensus 32 ~~~l~~~~~~Cf~~~v~-~~~~i~~~y~v~~~~~~~~~~i~~~v~-~----p~---g~--~v~~~~~~-~---~~~~~f~ 96 (217)
++.|.+|+....-..+. +|..+.=.|.+.++ +|.|.|+ . ++ |. .+...... . -..-++.
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~~------DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~G~~~ 354 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDGA------DVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLT 354 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEESSS------CEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEEEEEE
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEecCC------cEEEEEEEecccccccCCCcceEEeeeeeecCccccccCEEE
Confidence 38889999888888887 58888888887432 6777776 1 11 21 22221111 1 1134578
Q ss_pred ecccceeeEEEEeCCCCCCCCeEEEEEEEeec
Q 027923 97 THEAGNYLACFWVDGHNPGGGDVSVNIDWKTG 128 (217)
Q Consensus 97 ~~~~G~y~iCf~n~~~~~~~~~~~v~f~~~~g 128 (217)
+.++|.|.++|+|+.+ +...++|.+.+.+-
T Consensus 355 ~~~~G~y~l~fdNs~S--~~~~k~l~y~v~v~ 384 (403)
T 1olm_A 355 CSDPGIYVLRFDNTYS--FIHAKKVNFTVEVL 384 (403)
T ss_dssp CCSCEEEEEEEECTTC--CCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEecccc--ceeceEEEEEEEEe
Confidence 9999999999988543 33467887777764
No 2
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=94.08 E-value=0.07 Score=37.17 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=50.2
Q ss_pred EEcCCCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCe---eeeeeccccceEEEEecccceeeEEEEe
Q 027923 34 NLPATGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNN---LHNRENVTYGQFAFTTHEAGNYLACFWV 109 (217)
Q Consensus 34 ~l~~~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~---v~~~~~~~~~~~~f~~~~~G~y~iCf~n 109 (217)
.|.+++...+.-.+.+|+.+.+.. +. +..+-|.|++|+++. ++..+....+.|+-+.+.+|.|++=+..
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l---s~----~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~ 94 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI---GG----SSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQ 94 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C---EE----STTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEEC
T ss_pred EecCCCceEEEEEecCCCEEEEEe---CC----CCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEe
Confidence 577888899999999999998876 22 225678899999974 3444433346888999999999999875
No 3
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.13 E-value=0.52 Score=31.39 Aligned_cols=54 Identities=17% Similarity=0.237 Sum_probs=36.1
Q ss_pred ceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 68 PTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
.++.+.|.+|+|+.+... .+..+|. .+|++.+.|.|+++..-.+.+-..++-.+
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v 78 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQF 78 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEE
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEE
Confidence 478999999999865322 2233554 57788999999999986554322345443
No 4
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=93.10 E-value=1.2 Score=29.90 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=31.2
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|+|..+... .+..+|. .+|++...|.|.+.+.-.+
T Consensus 38 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 38 SAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGG 85 (100)
T ss_dssp SCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred CceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 3478899999999754322 2333554 4778889999999986533
No 5
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.91 E-value=1.1 Score=31.40 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=36.2
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|+|..+..+ .+...|. .+|++.+.|.|++++.-.+.+-..++-.|
T Consensus 42 ~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 99 (124)
T 2dmb_A 42 KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTV 99 (124)
T ss_dssp SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEE
T ss_pred CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEE
Confidence 3478899999999754332 2234554 47888999999999986444322344444
No 6
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.89 E-value=1.1 Score=30.74 Aligned_cols=55 Identities=13% Similarity=0.259 Sum_probs=36.0
Q ss_pred CceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|+|+.+... .+..+|.| +|++.+.|.|++.+.-...+-..++-.+
T Consensus 43 ~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v 100 (115)
T 2d7m_A 43 EGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRI 100 (115)
T ss_dssp SSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEE
T ss_pred CCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEE
Confidence 3478999999998754332 23345654 6788899999999976444322345444
No 7
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=92.87 E-value=0.99 Score=29.41 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=30.1
Q ss_pred ceEEEEEECCCCCeeee-eeccccce--EEEEecccceeeEEEEeCC
Q 027923 68 PTISVKVTSPYGNNLHN-RENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~-~~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
..+.+.|.+|+|..+.. -.+..+|. .+|++.+.|.|.+.+.-.+
T Consensus 30 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 30 NMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp CCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 46888889999863322 12233555 4678889999999987543
No 8
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.65 E-value=1 Score=30.61 Aligned_cols=55 Identities=16% Similarity=0.202 Sum_probs=35.4
Q ss_pred CceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|+|..+... .+..+|.| +|++.+.|.|.+.+.-...+-..++-.|
T Consensus 42 ~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v 99 (108)
T 2dj4_A 42 LAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKV 99 (108)
T ss_dssp SCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESSSBCTTCSEEE
T ss_pred CceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEE
Confidence 4578999999999654322 23345554 6788899999999976443322334433
No 9
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.43 E-value=0.55 Score=31.44 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=33.0
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCC
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGH 112 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~ 112 (217)
..++.+.|.+|+|+.+... .+..+|. .+|++.+.|.|++++.-...
T Consensus 29 ~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~ 77 (95)
T 2ee9_A 29 KGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGS 77 (95)
T ss_dssp TTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSC
T ss_pred CCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCE
Confidence 4479999999999865332 2233554 46788899999999986544
No 10
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.69 E-value=1 Score=30.45 Aligned_cols=54 Identities=17% Similarity=0.284 Sum_probs=35.9
Q ss_pred CceEEEEEECCCCCeeeeeeccccc--eEEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYG--QFAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~--~~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|++..+ .-.+..+| ..+|++...|.|.+.+.-.+.+-..++-.+
T Consensus 41 ~~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 96 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLV 96 (105)
T ss_dssp CCCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEE
T ss_pred CCcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEE
Confidence 3468889999998655 22333455 468899999999999986443322344443
No 11
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=91.56 E-value=1.7 Score=29.88 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=35.3
Q ss_pred ceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCCCCCCCeEE
Q 027923 68 PTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVS 120 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~ 120 (217)
-.+.+.|.+|+|..+... .+...|. .+|++++.|.|.+.+.-.+.+-..++-.
T Consensus 41 g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~ 96 (112)
T 2d7p_A 41 GVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFK 96 (112)
T ss_dssp SCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEE
T ss_pred CCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEE
Confidence 378999999999865332 2233454 5788899999999998654432234533
No 12
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=91.44 E-value=1.6 Score=28.79 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=30.4
Q ss_pred CceEEEEEECCCCCeeee-eeccccce--EEEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHN-RENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~-~~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|+|..+.. -.+..+|. .+|++.+.|.|.+.+.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 346888899999864321 12233555 4678889999999987543
No 13
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.02 E-value=1.1 Score=31.06 Aligned_cols=55 Identities=13% Similarity=0.249 Sum_probs=35.1
Q ss_pred CceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|+|..+... .+..+|.| +|++.+.|.|++.+.-...+-..++-.+
T Consensus 53 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~v 110 (119)
T 2e9j_A 53 EGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRI 110 (119)
T ss_dssp CCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESSCBCTTCSEEE
T ss_pred CCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEE
Confidence 3478899999999754222 23345554 6778899999999875443322334443
No 14
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=90.86 E-value=1.9 Score=28.35 Aligned_cols=52 Identities=15% Similarity=0.278 Sum_probs=33.5
Q ss_pred eEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 69 TISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
.+.+.|.+|++..+.-. +..+|. .+|++.+.|.|.+.+.-...+-..++-.+
T Consensus 35 ~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 88 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVV 88 (94)
T ss_dssp CEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEETTEECTTCSEEE
T ss_pred cEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEE
Confidence 57788889988654322 233554 57888999999999975443322334444
No 15
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.49 E-value=2.2 Score=29.13 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=36.2
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCCCCCCCeEEEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSVNI 123 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 123 (217)
...+.+.|.+|+|..+... .+..+|. .+|++.+.|.|++.+.-.+.+-..++-.+.+
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~v 100 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEEE
Confidence 3478888999988654332 3334565 4788899999999997644332234544433
No 16
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=90.06 E-value=3.9 Score=29.16 Aligned_cols=55 Identities=27% Similarity=0.401 Sum_probs=35.8
Q ss_pred CceEEEEEECCCCCeeeeeeccccc-eEEEEecccceeeEEEEeCC-CCCCCCeEEEE
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYG-QFAFTTHEAGNYLACFWVDG-HNPGGGDVSVN 122 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~-~~~f~~~~~G~y~iCf~n~~-~~~~~~~~~v~ 122 (217)
...+.+.|.+|++..+.-.+ ..+| ..+|++.+.|.|.+.+.-.+ .+-..++-.+.
T Consensus 75 ~g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~ 131 (138)
T 2nqc_A 75 SGALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAK 131 (138)
T ss_dssp SCCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred CCcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEECCcccCCCCCeEEE
Confidence 34788999999997553333 2345 44778889999999987544 33223454443
No 17
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.68 E-value=3.6 Score=28.15 Aligned_cols=55 Identities=9% Similarity=0.187 Sum_probs=35.7
Q ss_pred CceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEEE
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSVN 122 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 122 (217)
...+.+.|.+|++..+. -.+..+|. .+|++.+.|.|.+.+.-...+-..++-.+.
T Consensus 51 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 107 (115)
T 2eea_A 51 EGGLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAK 107 (115)
T ss_dssp SSCEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEE
T ss_pred CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEE
Confidence 34788999999985442 23334564 578889999999999754433223444443
No 18
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.35 E-value=1.2 Score=30.03 Aligned_cols=46 Identities=24% Similarity=0.266 Sum_probs=32.8
Q ss_pred CceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCCC
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDGH 112 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~~ 112 (217)
...+.+.|.+|+|..+... .+..+|.| +|++.+.|.|.+.+.-...
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~ 78 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQ 78 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSS
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCE
Confidence 3478999999999865432 23335554 6788899999999975443
No 19
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.12 E-value=0.59 Score=32.42 Aligned_cols=72 Identities=14% Similarity=0.238 Sum_probs=42.6
Q ss_pred ccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 47 IQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 47 v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
+..|....+.....+.+ ...+.+.|.+|+|+.+-.. .+...|. .+|++.+.|.|.+.+.-.+.+-..++-.+
T Consensus 27 ~~vg~~~~f~v~~~~ag---~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v 101 (116)
T 2dmc_A 27 VKLGSAADFLLDISETD---LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSI 101 (116)
T ss_dssp CCTTSCEEEECCCSCCC---STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEE
T ss_pred cccCCceEEEEEecCCC---CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEE
Confidence 34455444444333322 3478899999999754332 2233554 57888999999999975443322345433
No 20
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=89.03 E-value=3.5 Score=27.18 Aligned_cols=55 Identities=11% Similarity=0.207 Sum_probs=34.8
Q ss_pred CceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEEE
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSVN 122 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~ 122 (217)
...+.+.|.+|++..+.-. +..+|. .+|++++.|.|.+.+.-...+-..++-.+.
T Consensus 36 ~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 92 (97)
T 2bp3_A 36 EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTAR 92 (97)
T ss_dssp SEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred CCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEECCEECCCcCEEEE
Confidence 3478888899988554322 233554 578888999999999754432223344443
No 21
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=88.48 E-value=3.9 Score=27.09 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=39.8
Q ss_pred cCCcEEEEEEEEeeCCC--CCCceEEEEEECCCCCeeeeeecc--ccceE--EEEec---ccceeeEEEEe
Q 027923 48 QNNVVVLADYVVVSDDH--SHSPTISVKVTSPYGNNLHNRENV--TYGQF--AFTTH---EAGNYLACFWV 109 (217)
Q Consensus 48 ~~~~~i~~~y~v~~~~~--~~~~~i~~~v~~p~g~~v~~~~~~--~~~~~--~f~~~---~~G~y~iCf~n 109 (217)
..|+.+.+..-+.+.+. .....+.+.+.||+|+.+.++... ..|.+ +|..+ ..|.|++....
T Consensus 14 rPGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 14 KPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp CTTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred CCCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 34788877766664421 113347899999999998775322 24544 44443 46999999975
No 22
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=88.48 E-value=1.1 Score=30.68 Aligned_cols=72 Identities=6% Similarity=-0.065 Sum_probs=51.5
Q ss_pred eEEEEEcCCCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeee---eccccceEEEEecccceeeEE
Q 027923 30 AIWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNR---ENVTYGQFAFTTHEAGNYLAC 106 (217)
Q Consensus 30 ~l~~~l~~~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~---~~~~~~~~~f~~~~~G~y~iC 106 (217)
.+.=.|.+++...+...+.+|+.+.+... . + ...+.|..|.+...... ......+++.+.+.+|.|++=
T Consensus 17 ~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l~--s-~-----~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~ 88 (111)
T 4g9s_B 17 QYSGEIKGYDYDTYTFYAKKGQKVHVSIS--N-E-----GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELR 88 (111)
T ss_dssp EEEEEEETTCCEEEEEEECTTCEEEEEES--C-T-----TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEE
T ss_pred EEEEEEeCCCceEEEEEecCCCEEEEEEe--c-C-----CccEEEECCCCccccccccccccCCceEEEEecCCccEEEE
Confidence 34557888999999999999999988752 2 1 34566888877643221 122245678889999999999
Q ss_pred EEe
Q 027923 107 FWV 109 (217)
Q Consensus 107 f~n 109 (217)
+..
T Consensus 89 V~~ 91 (111)
T 4g9s_B 89 VLQ 91 (111)
T ss_dssp EEC
T ss_pred EEe
Confidence 863
No 23
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.29 E-value=4.3 Score=27.27 Aligned_cols=43 Identities=16% Similarity=0.327 Sum_probs=30.4
Q ss_pred ceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCC
Q 027923 68 PTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
..+.+.|.+|.+..+.-.+ ..+|. .+|++.+.|.|.+.+.-..
T Consensus 42 g~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 42 GGLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYGG 86 (105)
T ss_dssp SCEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEETT
T ss_pred CceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEECC
Confidence 3678888999886543222 33554 5778889999999997544
No 24
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=87.41 E-value=5.4 Score=27.42 Aligned_cols=54 Identities=17% Similarity=0.290 Sum_probs=35.7
Q ss_pred CceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|++..+. -.+..+|. .+|++.+.|.|.+.+.-.+.+-..++-.+
T Consensus 48 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 103 (119)
T 2k9u_A 48 AGGLSIAVEGPSKAEIA-FEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 103 (119)
T ss_dssp SEEEEEEEESSSCCEEE-EECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEE
T ss_pred CCcEEEEEeCCCCCeEE-EEECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEE
Confidence 45788999999884332 23334564 57888999999999986444322345444
No 25
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.22 E-value=1.4 Score=30.91 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=34.9
Q ss_pred CceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
...+.+.|.+|+|..+... .+..+|.| +|++.+.|.|++.+.-.+.+-..++-.+
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~~I~gSPF~v 113 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKV 113 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSCBCTTCSEEE
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCEECCCCCEEE
Confidence 3478889999999744322 22335554 6788899999999975443322334443
No 26
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=85.53 E-value=3.6 Score=34.07 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=48.0
Q ss_pred eEEEEEcCCCcceEeeeccC-----CcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeee---eeccccce--EEEEecc
Q 027923 30 AIWLNLPATGTKCVSEEIQN-----NVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHN---RENVTYGQ--FAFTTHE 99 (217)
Q Consensus 30 ~l~~~l~~~~~~Cf~~~v~~-----~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~---~~~~~~~~--~~f~~~~ 99 (217)
.+.-..+|+.-+|+---++. |....+.....+.+ ...+.+.|.+|+|..+-- ..+...|. .+|++.+
T Consensus 247 ~l~~k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG---~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~ 323 (347)
T 4b7l_A 247 PLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAG---QGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKV 323 (347)
T ss_dssp CCCCSCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTC---SCCEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCS
T ss_pred cccccccccceeEEeccccccCceeCCEEEEEEEeCCCC---CCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECC
Confidence 33344555555666655543 34444444333322 347999999999985432 22333554 4788899
Q ss_pred cceeeEEEEeCC
Q 027923 100 AGNYLACFWVDG 111 (217)
Q Consensus 100 ~G~y~iCf~n~~ 111 (217)
.|.|.+-+.-.+
T Consensus 324 ~G~~~I~V~~~g 335 (347)
T 4b7l_A 324 TGLHKVTVLFAG 335 (347)
T ss_dssp SSEEEEEEEETT
T ss_pred CEeEEEEEEECC
Confidence 999999987544
No 27
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.99 E-value=7.1 Score=26.50 Aligned_cols=55 Identities=20% Similarity=0.335 Sum_probs=35.2
Q ss_pred ceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEEEE
Q 027923 68 PTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSVNI 123 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 123 (217)
..+.+.|.+|++..+.- .+..+|. .+|++++.|.|.+.+.-...+-..++-.+.+
T Consensus 42 g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2di8_A 42 GGISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98 (111)
T ss_dssp CCEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEEE
T ss_pred CceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEE
Confidence 36788888998854422 2334564 5788889999999998644432234544433
No 28
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.58 E-value=7.1 Score=26.19 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=41.8
Q ss_pred CCcEEEEEEEEeeCCC----CCCceEEEEEECCCC--Ceee-eeeccccceE--EEEecccceeeEEEEeCCCCCCCCeE
Q 027923 49 NNVVVLADYVVVSDDH----SHSPTISVKVTSPYG--NNLH-NRENVTYGQF--AFTTHEAGNYLACFWVDGHNPGGGDV 119 (217)
Q Consensus 49 ~~~~i~~~y~v~~~~~----~~~~~i~~~v~~p~g--~~v~-~~~~~~~~~~--~f~~~~~G~y~iCf~n~~~~~~~~~~ 119 (217)
.+....+..+..+.+. .+...+.+.|.+|++ ..+. .-.+..+|.| +|++.+.|.|++++.-...+-..++-
T Consensus 26 ~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF 105 (113)
T 2ds4_A 26 EKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPF 105 (113)
T ss_dssp TTCCEEEEEECBBTTSSBCCCCCCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSE
T ss_pred cCCcEEEEEEEECCCCCCcccCCceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCE
Confidence 3455555555444320 013468888888886 2221 2233345654 67888999999999865443323444
Q ss_pred EEE
Q 027923 120 SVN 122 (217)
Q Consensus 120 ~v~ 122 (217)
.|.
T Consensus 106 ~v~ 108 (113)
T 2ds4_A 106 TVT 108 (113)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 29
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.36 E-value=8.3 Score=26.81 Aligned_cols=65 Identities=20% Similarity=0.371 Sum_probs=39.5
Q ss_pred EEEeeCCCCCCceEEEEEECCCCCeeeeeeccccc-eEEEEecccceeeEEEEeCC-CCCCCCeEEEEE
Q 027923 57 YVVVSDDHSHSPTISVKVTSPYGNNLHNRENVTYG-QFAFTTHEAGNYLACFWVDG-HNPGGGDVSVNI 123 (217)
Q Consensus 57 y~v~~~~~~~~~~i~~~v~~p~g~~v~~~~~~~~~-~~~f~~~~~G~y~iCf~n~~-~~~~~~~~~v~f 123 (217)
|.+...+.+ ...+.+.|.+|++..+.-.+ ..+| ..+|++.+.|.|.+.+.-.. .+-..++-.+..
T Consensus 42 F~v~t~daG-~~~l~v~i~gp~~~~~~~~d-~~dGy~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~v 108 (125)
T 2eec_A 42 FFINTTRAG-PGTLSVTIEGPSKVKMDCQE-TPEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108 (125)
T ss_dssp EEEECTTTC-SCCEEEEEESSSCCCCEEEE-CSSSEEEEECCSSCEEEEEEEEESSSCBCTTCSEEEEE
T ss_pred EEEEEcCCC-CCcEEEEEECCCCCcceeEE-CCCCEEEEEEcCCCeEEEEEEEECCcccCCCCCeEEEE
Confidence 444443332 34788999999986553333 2355 34677889999999987544 332234544433
No 30
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=83.16 E-value=7 Score=27.66 Aligned_cols=55 Identities=16% Similarity=0.120 Sum_probs=38.7
Q ss_pred cEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeeee--ccccceEEEEec---------ccceeeEEEEe
Q 027923 51 VVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNRE--NVTYGQFAFTTH---------EAGNYLACFWV 109 (217)
Q Consensus 51 ~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~~--~~~~~~~~f~~~---------~~G~y~iCf~n 109 (217)
....+.|.+... ...+.+.|+|.+|++|++-. ..+.|.+.|... .+|.|++-+.-
T Consensus 24 ~~~~~~~~l~~~----a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a 89 (138)
T 3osv_A 24 DTFKASLNLPVS----SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQT 89 (138)
T ss_dssp SCEEEEEEESBC----EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CeEEEEEECCCC----CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEE
Confidence 346677776543 24799999999999998753 345676666654 25899998864
No 31
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.79 E-value=10 Score=26.54 Aligned_cols=53 Identities=11% Similarity=0.272 Sum_probs=34.6
Q ss_pred ceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEE
Q 027923 68 PTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSV 121 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v 121 (217)
..+.+.|.+|++..+.- .+..+|. .+|++.+.|.|.+.+.-...+-..++-.+
T Consensus 62 ~~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 116 (131)
T 2di9_A 62 GGLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKA 116 (131)
T ss_dssp SCEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEE
T ss_pred CeeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEE
Confidence 46888889998854422 2233565 47888999999999976444322345444
No 32
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=82.76 E-value=13 Score=27.72 Aligned_cols=44 Identities=11% Similarity=0.205 Sum_probs=31.8
Q ss_pred CceEEEEEECCCCCeeeeeeccccc--eEEEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYG--QFAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~--~~~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|++..+.-. +..+| ..+|++...|.|.+++.-.+
T Consensus 127 ~g~l~v~I~gp~~~~~~~~-d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 127 EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp SSCEEEEEECSSCCEEEEE-ECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CCCeEEEEeCCCCCeEEEE-ECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 3468888999988654322 33456 56888899999999998644
No 33
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.47 E-value=4.1 Score=27.73 Aligned_cols=55 Identities=16% Similarity=0.304 Sum_probs=34.3
Q ss_pred ceEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCCCCCCCCeEEEEE
Q 027923 68 PTISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDGHNPGGGDVSVNI 123 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f 123 (217)
..+.+.|.+|++..+.- .+..+|. .+|++.+.|.|.+.+.-...+-..++-.+.+
T Consensus 42 ~~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2d7o_A 42 GGLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98 (111)
T ss_dssp SCBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEEE
T ss_pred CcEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEEE
Confidence 36778888998754422 2334564 4678889999999997544332234544433
No 34
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=81.17 E-value=10 Score=26.78 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=36.8
Q ss_pred EEEEEEEeeCCCCCCceEEEEEECCCCCeeeeee--ccccceEEEEec---------ccceeeEEEEe
Q 027923 53 VLADYVVVSDDHSHSPTISVKVTSPYGNNLHNRE--NVTYGQFAFTTH---------EAGNYLACFWV 109 (217)
Q Consensus 53 i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~~--~~~~~~~~f~~~---------~~G~y~iCf~n 109 (217)
..+.|. ... ...+.+.|+|.+|++|++-. ..+.|.+.|... .+|.|++.+..
T Consensus 29 ~~~~~~-~~~----a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a 91 (138)
T 3c12_A 29 AKGVVA-ATS----AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQ 91 (138)
T ss_dssp EEEEEE-ESS----SEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred EEEEEe-cCC----CCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEE
Confidence 456666 432 34799999999999998754 345667777653 25899999964
No 35
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=81.06 E-value=9.2 Score=26.03 Aligned_cols=55 Identities=7% Similarity=0.065 Sum_probs=40.1
Q ss_pred CcEEEEEEEEeeCCCCCCceEEEEEE-CCCCCeeeeeecccc--ceEEEEec--ccceeeEEEEeC
Q 027923 50 NVVVLADYVVVSDDHSHSPTISVKVT-SPYGNNLHNRENVTY--GQFAFTTH--EAGNYLACFWVD 110 (217)
Q Consensus 50 ~~~i~~~y~v~~~~~~~~~~i~~~v~-~p~g~~v~~~~~~~~--~~~~f~~~--~~G~y~iCf~n~ 110 (217)
|..+.+.|... ..++.+.|+ +..|++||++.-... ..+.+... .+|.|.+=+.+.
T Consensus 37 ~~~L~I~F~~~------~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 37 GYLLTLKNASP------DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp TTEEEEEESSC------CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred CCEEEEEECCc------CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 56788877322 348999999 889999998865433 34555554 689999999864
No 36
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=78.97 E-value=11 Score=28.15 Aligned_cols=44 Identities=18% Similarity=0.398 Sum_probs=31.3
Q ss_pred CceEEEEEECCCCCeeeeeeccccc--eEEEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYG--QFAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~--~~~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|++..+.- .+..+| ..+|++.+.|.|.+++.-..
T Consensus 127 ~g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (191)
T 2k7q_A 127 YGGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFAD 172 (191)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEETT
T ss_pred CCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEECC
Confidence 346888888998754422 233456 56889999999999998544
No 37
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=76.55 E-value=19 Score=28.90 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=32.2
Q ss_pred ceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCC
Q 027923 68 PTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGH 112 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~ 112 (217)
..+.+.|.+|+| .+... .+...|. .+|++.+.|.|.+++.-.+.
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~ 280 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 280 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTE
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCE
Confidence 468899999999 44322 2344666 58888999999999986443
No 38
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=76.37 E-value=7.6 Score=28.99 Aligned_cols=43 Identities=21% Similarity=0.218 Sum_probs=31.6
Q ss_pred eEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCC
Q 027923 69 TISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
.+.+.|.+|+|+...-. .+..+|. .+|++.+.|.|++.+...+
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 78899999999865322 2233564 5778889999999998654
No 39
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=74.51 E-value=14 Score=24.83 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=47.5
Q ss_pred EEEEEcCCCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECC-CCCeeeeeeccccceEEEEe--cccceeeEEE
Q 027923 31 IWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSP-YGNNLHNRENVTYGQFAFTT--HEAGNYLACF 107 (217)
Q Consensus 31 l~~~l~~~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p-~g~~v~~~~~~~~~~~~f~~--~~~G~y~iCf 107 (217)
-++-+.|-.+.|-+.+ | .+.+.|.-. .+.+.+.|.+- .|+.||+.....-...+... ..+|+|.+=+
T Consensus 18 rsI~i~P~~~~~A~I~---n-vlsV~F~~~------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI 87 (101)
T 3sd2_A 18 MGIPIQPTYEKCAILS---N-ILNVSFGRA------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHI 87 (101)
T ss_dssp CCCCCCCSSEEEEEET---T-EEEEEESSC------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEE
T ss_pred ceeeecccccccEEEe---C-EEEEEeccC------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEE
Confidence 3445566666787765 5 788877422 34799999985 79999998655434455544 4689999988
Q ss_pred EeC
Q 027923 108 WVD 110 (217)
Q Consensus 108 ~n~ 110 (217)
.-+
T Consensus 88 ~~~ 90 (101)
T 3sd2_A 88 ILN 90 (101)
T ss_dssp EET
T ss_pred EeC
Confidence 643
No 40
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=73.65 E-value=24 Score=26.53 Aligned_cols=45 Identities=16% Similarity=0.260 Sum_probs=32.0
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCCC
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDGH 112 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~~ 112 (217)
...+.+.|.+|+| .+... .+...|. .+|++.+.|.|.+++.-.+.
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 3478999999999 33221 2334664 57888999999999986443
No 41
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=71.55 E-value=45 Score=29.50 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=49.1
Q ss_pred eEEEEEcCCCcceEee--ec--cCCcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeeeeecc-ccceEEEE--ec---
Q 027923 30 AIWLNLPATGTKCVSE--EI--QNNVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHNRENV-TYGQFAFT--TH--- 98 (217)
Q Consensus 30 ~l~~~l~~~~~~Cf~~--~v--~~~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~~~~~-~~~~~~f~--~~--- 98 (217)
...+.+...+.-.|.+ .- ..|+.+.+..-+.+.+- +.+..+.+.|.||+|+.+.++... ..|-+.+. .+
T Consensus 110 ~~~v~~~~~~~~vFIqTDr~iYrPGqtV~~r~i~~d~~~~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~ 189 (656)
T 4fxk_A 110 GINLLFSSRRGHLFLQTDQPIYNPGQRVRYRVFALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDIS 189 (656)
T ss_dssp EEEEEECCCCSEEEEEESCSEECTTCEEEEEEEEECSSSSBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTC
T ss_pred eeEEEEeccCccEEEECCCCCcCCCCEEEEEEEEECCccCcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCC
Confidence 3344444444445532 11 34788877666655431 224478999999999998765422 24554443 33
Q ss_pred ccceeeEEEEeCC
Q 027923 99 EAGNYLACFWVDG 111 (217)
Q Consensus 99 ~~G~y~iCf~n~~ 111 (217)
..|.|++-+...+
T Consensus 190 ~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 190 EPGTWKISARFSD 202 (656)
T ss_dssp CSEEEEEEEEESS
T ss_pred CCcCEEEEEEEcC
Confidence 4699999987543
No 42
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=70.35 E-value=26 Score=27.84 Aligned_cols=44 Identities=18% Similarity=0.344 Sum_probs=31.0
Q ss_pred CceEEEEEECCCCCeeeeeeccccceE--EEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYGQF--AFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~~~--~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|.+..+.- .+..+|.| +|++.+.|.|.+++.-.+
T Consensus 227 ~g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 227 AGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred CCceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 457888999997754432 23345654 888899999999997543
No 43
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=67.20 E-value=9.6 Score=32.56 Aligned_cols=44 Identities=27% Similarity=0.468 Sum_probs=36.8
Q ss_pred CceEEEEEECCCCCeeeeeeccccceEEEEecccceeeEEEEeC
Q 027923 67 SPTISVKVTSPYGNNLHNRENVTYGQFAFTTHEAGNYLACFWVD 110 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~~~~~~~~~~f~~~~~G~y~iCf~n~ 110 (217)
-+.+.|.+.+|+|.++.+..-...|.|.|..-.+|.|.+-|..+
T Consensus 329 l~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 329 AAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred cCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 34788999999999887766556999999999999999999643
No 44
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=65.39 E-value=31 Score=23.85 Aligned_cols=19 Identities=5% Similarity=-0.073 Sum_probs=15.6
Q ss_pred CceEEEEEECCCCCeeeee
Q 027923 67 SPTISVKVTSPYGNNLHNR 85 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~ 85 (217)
....+|.|+|++|+.++.+
T Consensus 41 gq~~Df~v~d~~G~~Vwrw 59 (120)
T 3isy_A 41 GQKFELVVYDSEHKERYRY 59 (120)
T ss_dssp SCCEEEEEECTTCCEEEET
T ss_pred CCEEEEEEECCCCCEEEEc
Confidence 3478999999999999854
No 45
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=65.30 E-value=18 Score=21.11 Aligned_cols=43 Identities=7% Similarity=0.167 Sum_probs=24.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 027923 142 KLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSR 184 (217)
Q Consensus 142 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~r 184 (217)
.++.|...++.|..++..+..+...++.--..-.+-+...+.|
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~R 47 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQR 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456667777777777777776666654333333333344444
No 46
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=64.94 E-value=25 Score=24.70 Aligned_cols=62 Identities=8% Similarity=0.144 Sum_probs=42.7
Q ss_pred ccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeeeec-----------------c-ccceEEEEecccceeeEEEE
Q 027923 47 IQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNREN-----------------V-TYGQFAFTTHEAGNYLACFW 108 (217)
Q Consensus 47 v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~~~-----------------~-~~~~~~f~~~~~G~y~iCf~ 108 (217)
..+|....+.|++..+. +....+.+++++|++|.+++. . ....|.......|+|.+-+.
T Consensus 11 ~~~~~~Mag~FEi~~~~---~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lk 87 (130)
T 2k8e_A 11 FNQGVIMAGWFELSKSS---DNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLK 87 (130)
T ss_dssp ---CCCCCCEEEEEECT---TCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEE
T ss_pred cCccceeeeeEEEEEcC---CCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEE
Confidence 34455556788887754 337899999999999876431 1 13568887888899999997
Q ss_pred eCC
Q 027923 109 VDG 111 (217)
Q Consensus 109 n~~ 111 (217)
..|
T Consensus 88 a~N 90 (130)
T 2k8e_A 88 AAN 90 (130)
T ss_dssp CTT
T ss_pred eCC
Confidence 644
No 47
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=62.59 E-value=27 Score=24.26 Aligned_cols=19 Identities=32% Similarity=0.345 Sum_probs=12.9
Q ss_pred ccceEEEEecccceeeEEE
Q 027923 89 TYGQFAFTTHEAGNYLACF 107 (217)
Q Consensus 89 ~~~~~~f~~~~~G~y~iCf 107 (217)
+...++++..++|.|.+=.
T Consensus 101 pG~t~~~tF~~~G~y~y~C 119 (132)
T 3c75_A 101 KDQAYAITFNEAGSYDYFC 119 (132)
T ss_dssp TTEEEEEEECSCEEEEEEC
T ss_pred CCCEEEEEcCCCEEEEEEe
Confidence 3345666667889998644
No 48
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=60.58 E-value=23 Score=26.23 Aligned_cols=45 Identities=20% Similarity=0.344 Sum_probs=32.5
Q ss_pred CceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCC
Q 027923 67 SPTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 67 ~~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
...+.+.|.+|+|+.+.-. ....+|. .+|++.+.|.|.+-+...+
T Consensus 30 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 30 LSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp SSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 3479999999999865322 2233454 5788899999999987654
No 49
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=59.55 E-value=20 Score=28.68 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=31.0
Q ss_pred ceEEEEEECCCCCeeeee-eccccce--EEEEecccceeeEEEEeCC
Q 027923 68 PTISVKVTSPYGNNLHNR-ENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~-~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
..+.+.|.+|+|..+... .+...|. .+|++.+.|.|++++.-.+
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 468899999999643221 2233554 4778889999999998644
No 50
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=59.40 E-value=20 Score=26.99 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=30.7
Q ss_pred ceEEEEEECCCCCeeeee-eccccceE--EEEecccceeeEEEEeCC
Q 027923 68 PTISVKVTSPYGNNLHNR-ENVTYGQF--AFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~-~~~~~~~~--~f~~~~~G~y~iCf~n~~ 111 (217)
..+.+.|.+|+|..+... .+...|.| +|++.+.|.|++-+...+
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 478899999998654322 22335554 677889999999987644
No 51
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=57.21 E-value=44 Score=22.98 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=47.6
Q ss_pred CCCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeeeecc-ccceEEEEecccceeeEEEEe
Q 027923 37 ATGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNRENV-TYGQFAFTTHEAGNYLACFWV 109 (217)
Q Consensus 37 ~~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~~~~-~~~~~~f~~~~~G~y~iCf~n 109 (217)
......|..++++...+.+.+.-.. +.+++..+++.+++.+...... ..-.-+|.+.++|.|-+.+..
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~-----~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~ 103 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLG-----YGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYM 103 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECS-----SSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecC-----CCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEE
Confidence 3458899999999888888776442 3478889988777766443321 122335677789999999975
No 52
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=55.62 E-value=20 Score=28.85 Aligned_cols=67 Identities=16% Similarity=0.332 Sum_probs=33.2
Q ss_pred e--EeeeccC-CcEEEEEEEEeeCCCC----CCceEEEEEECCCCCeeeeeeccc----cceEEEEec-ccceeeEEEE
Q 027923 42 C--VSEEIQN-NVVVLADYVVVSDDHS----HSPTISVKVTSPYGNNLHNRENVT----YGQFAFTTH-EAGNYLACFW 108 (217)
Q Consensus 42 C--f~~~v~~-~~~i~~~y~v~~~~~~----~~~~i~~~v~~p~g~~v~~~~~~~----~~~~~f~~~-~~G~y~iCf~ 108 (217)
| ++|+.+. ...+.+.|.-.-.... .-..|.+.|+|.+|+.+.+..... .+.|....+ ..|.|++-.-
T Consensus 4 Cd~I~edl~dC~~~l~F~Ydyn~~~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaW 82 (296)
T 3gf8_A 4 CDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAW 82 (296)
T ss_dssp ---------CCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEE
T ss_pred CccCCcCccCCCCEEEEEEecCCCcccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEE
Confidence 7 7776655 3455555543211100 123899999999999887654221 333444432 3588886543
No 53
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=55.47 E-value=44 Score=22.45 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=11.4
Q ss_pred hcccchHHHHHHHHHHHHHHH
Q 027923 140 KEKLEGVELELRKLEGAVEAI 160 (217)
Q Consensus 140 ~~~~~~l~~~l~~l~~~l~~i 160 (217)
.+++..++..+..|.+...++
T Consensus 20 ~~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 20 HSEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566666665555444433
No 54
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=55.21 E-value=50 Score=29.45 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=35.7
Q ss_pred CcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeeeeeccccceEEEEec---ccceeeEEEEeC
Q 027923 50 NVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHNRENVTYGQFAFTTH---EAGNYLACFWVD 110 (217)
Q Consensus 50 ~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~~~~~~~~~~~f~~~---~~G~y~iCf~n~ 110 (217)
|+.+.+..-+.+.+. +.+..+.+.|.||+|+.+..+.-...-.++|..+ ..|.|++.....
T Consensus 118 GqtV~~r~i~~d~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 118 GSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TCEECEEEEESCC-------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 666666655554321 1234788999999999987543222222344433 469999998753
No 55
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=53.89 E-value=33 Score=20.56 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=34.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 027923 141 EKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRV 185 (217)
Q Consensus 141 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv 185 (217)
++++.+...+.++...-..|.+|.+.....-++....++++..++
T Consensus 9 ~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l 53 (65)
T 1gl2_D 9 AGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 53 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557788888999999988998888877766666666666666654
No 56
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=51.88 E-value=86 Score=24.69 Aligned_cols=42 Identities=17% Similarity=0.408 Sum_probs=30.0
Q ss_pred eEEEEEECCCCCeeeeeeccccce--EEEEecccceeeEEEEeCC
Q 027923 69 TISVKVTSPYGNNLHNRENVTYGQ--FAFTTHEAGNYLACFWVDG 111 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~~~~~~~~--~~f~~~~~G~y~iCf~n~~ 111 (217)
.+.+.|.+|++..+.-. +..+|. .+|+++..|.|.+-+.-.+
T Consensus 38 ~l~v~i~~p~~~~~~~~-d~~dGty~v~y~p~~~G~y~i~V~~~g 81 (288)
T 2j3s_A 38 GLSLSIEGPSKVDINTE-DLEDGTCRVTYCPTEPGNYIINIKFAD 81 (288)
T ss_dssp CEEEEEESSSCCEEEEE-ECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEECCCCceeEEE-ECCCCEEEEEEECCCCeEEEEEEEECC
Confidence 57888889987554322 334564 5888899999999987544
No 57
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=49.47 E-value=47 Score=20.99 Aligned_cols=46 Identities=24% Similarity=0.179 Sum_probs=33.3
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 027923 140 KEKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRV 185 (217)
Q Consensus 140 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv 185 (217)
.++++.+...+.+|.+.-..|.+|.+.....-+..-..++++..++
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L 63 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRL 63 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888999988888888888776665555555555555554
No 58
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=49.06 E-value=25 Score=28.53 Aligned_cols=64 Identities=11% Similarity=0.127 Sum_probs=35.7
Q ss_pred EeeeccC-CcEEEEEEEEeeCCCC----CCceEEEEEECCCCCeeeeeeccc----cceEEEEec---ccceeeEEE
Q 027923 43 VSEEIQN-NVVVLADYVVVSDDHS----HSPTISVKVTSPYGNNLHNRENVT----YGQFAFTTH---EAGNYLACF 107 (217)
Q Consensus 43 f~~~v~~-~~~i~~~y~v~~~~~~----~~~~i~~~v~~p~g~~v~~~~~~~----~~~~~f~~~---~~G~y~iCf 107 (217)
++|+.+. ...+.+.|........ .-..|.+.|+|.+|+.+.+..... .+. ....+ ..|.|++-.
T Consensus 6 I~eDl~dC~~~L~F~Ydyn~~~~d~f~~~V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~-~m~l~~~l~~G~Y~~Va 81 (314)
T 3pay_A 6 IREDLPRCELWLEFVFDYNMEYADAFNPQVKSVDVLVFDSDDKLLFTKSVKVAALVGGN-RMSLTDELDFGSYKVLT 81 (314)
T ss_dssp SCSSSCCCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEEGGGSBTTT-EEECTTTCCSEEEEEEE
T ss_pred cccCccCCCCeEEEEEecCCCcccchhcccCEEEEEEEcCCCCEEEEEecchhhccCCc-eEecCCcCCCCcEEEEE
Confidence 6665544 2466666533322110 133899999999999887654321 122 44443 257777544
No 59
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=45.04 E-value=1.6e+02 Score=25.96 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=40.1
Q ss_pred CCcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeeeeecc---ccceE--EEEec---ccceeeEEEEeC
Q 027923 49 NNVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHNRENV---TYGQF--AFTTH---EAGNYLACFWVD 110 (217)
Q Consensus 49 ~~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~~~~~---~~~~~--~f~~~---~~G~y~iCf~n~ 110 (217)
.|+.+.+..-+.+.+. +.+..+.+.|.||+|+.+.+..-. ..|-+ +|..+ ..|.|++-....
T Consensus 119 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTVNHKLLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEECTTSCBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEECCCCcccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 3677777766665431 123478999999999998764322 34544 44443 469999999763
No 60
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=43.94 E-value=2.4e+02 Score=27.49 Aligned_cols=62 Identities=15% Similarity=0.172 Sum_probs=39.7
Q ss_pred CCcEEEEEEEEeeCCCCC---CceEEEEEECCCCCeeeeeecc--ccceE--EEEec---ccceeeEEEEeC
Q 027923 49 NNVVVLADYVVVSDDHSH---SPTISVKVTSPYGNNLHNRENV--TYGQF--AFTTH---EAGNYLACFWVD 110 (217)
Q Consensus 49 ~~~~i~~~y~v~~~~~~~---~~~i~~~v~~p~g~~v~~~~~~--~~~~~--~f~~~---~~G~y~iCf~n~ 110 (217)
.|+.+.+.--+.+.+... ...+.+.|.||+|+.+.++... ..|.+ +|..+ ..|.|+|-....
T Consensus 113 PGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 113 PGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 367777665555543211 1358999999999998876543 34544 33333 469999998753
No 61
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=43.01 E-value=66 Score=20.82 Aligned_cols=33 Identities=9% Similarity=0.243 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 027923 155 GAVEAIHENLLYLKTKEAEMREVSEKTNSRVAW 187 (217)
Q Consensus 155 ~~l~~i~~~q~~~~~re~~~r~~~es~~~rv~~ 187 (217)
++|+.+.+..+-+......++..+...+++.+|
T Consensus 33 ekL~~L~~kt~~L~~~s~~F~~~A~~l~rkmww 65 (91)
T 3hd7_A 33 QKLSELDDRADALQAGASQFETSAAKLKRKYWW 65 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555556666666666655444
No 62
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=42.11 E-value=27 Score=25.80 Aligned_cols=39 Identities=13% Similarity=-0.058 Sum_probs=23.9
Q ss_pred ccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeeee
Q 027923 47 IQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHNR 85 (217)
Q Consensus 47 v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~~ 85 (217)
+..|+.+.+.+.+.-...-.++.+.+.|++..|..++..
T Consensus 66 ~~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 66 LTGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp EETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEEE
T ss_pred EeCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEec
Confidence 345665555444433221125678899999999988753
No 63
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=41.74 E-value=39 Score=17.87 Aligned_cols=26 Identities=12% Similarity=0.276 Sum_probs=14.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 143 LEGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 143 ~~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
++.+++.+..|...-.++.++...++
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk 28 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLK 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34556666666666666665555444
No 64
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=38.79 E-value=43 Score=17.46 Aligned_cols=26 Identities=8% Similarity=0.147 Sum_probs=14.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 143 LEGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 143 ~~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
++.+++++..|...-+++.++...++
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk 28 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIX 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 34556666666555555555554444
No 65
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=38.12 E-value=78 Score=20.24 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=35.7
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027923 140 KEKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRVA 186 (217)
Q Consensus 140 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv~ 186 (217)
.+.++.|...+.+|...-..|-.|.+..-..-++.-..++++..++-
T Consensus 28 D~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 28 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35677888888888888888888888877777767677777766653
No 66
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=37.38 E-value=56 Score=18.43 Aligned_cols=13 Identities=15% Similarity=0.156 Sum_probs=5.0
Q ss_pred hHHHHHHHHHHHH
Q 027923 145 GVELELRKLEGAV 157 (217)
Q Consensus 145 ~l~~~l~~l~~~l 157 (217)
.++..++.|+.++
T Consensus 9 ~Le~~ld~LqTr~ 21 (46)
T 3swy_A 9 QLGSSLDTLQTRF 21 (46)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 67
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=36.92 E-value=55 Score=18.16 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=13.4
Q ss_pred HHHHHhHHHHHHHhhHHHHHHHHHH
Q 027923 177 VSEKTNSRVAWYSLMSLGVCIVVSG 201 (217)
Q Consensus 177 ~~es~~~rv~~~si~~~~vli~~~~ 201 (217)
+.+.-=+...|.+++-+++++.+++
T Consensus 16 Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 16 TFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344455666666666666554
No 68
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=36.79 E-value=54 Score=21.92 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=27.5
Q ss_pred EEEEECCCCCeeeeeeccccceEEEEecccc---eeeEEEEe
Q 027923 71 SVKVTSPYGNNLHNRENVTYGQFAFTTHEAG---NYLACFWV 109 (217)
Q Consensus 71 ~~~v~~p~g~~v~~~~~~~~~~~~f~~~~~G---~y~iCf~n 109 (217)
.+.|+|.+|.++......+.+...+-+.++| -+++||.-
T Consensus 51 ~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~l 92 (106)
T 3fn2_A 51 YVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFLI 92 (106)
T ss_dssp EEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEEE
T ss_pred cEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEEe
Confidence 4788999999988555555677788777665 35666643
No 69
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=36.77 E-value=68 Score=19.18 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=35.1
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027923 140 KEKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRVA 186 (217)
Q Consensus 140 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv~ 186 (217)
.+.++.+...+.++...-..|-.|.+..-..-.+.-..++++..++-
T Consensus 9 D~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 9 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35677888888888888888888887777766666666666666653
No 70
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=36.57 E-value=13 Score=17.36 Aligned_cols=10 Identities=50% Similarity=0.962 Sum_probs=7.3
Q ss_pred HHHHHhhhcc
Q 027923 206 HLKRFFQKKK 215 (217)
Q Consensus 206 ~lk~fF~~kk 215 (217)
.|.|||+++|
T Consensus 9 SLqRFleKRk 18 (21)
T 3ogl_Q 9 SLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHhh
Confidence 5778887765
No 71
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=35.53 E-value=81 Score=19.72 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=8.8
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 027923 143 LEGVELELRKLEGAVEAIHE 162 (217)
Q Consensus 143 ~~~l~~~l~~l~~~l~~i~~ 162 (217)
++.++..|+.|+.++..+..
T Consensus 9 v~~LE~sld~LQTrfARLLa 28 (74)
T 3swf_A 9 VTRMESSVDLLQTRFARILA 28 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433
No 72
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=35.29 E-value=90 Score=20.15 Aligned_cols=26 Identities=19% Similarity=0.339 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 147 ELELRKLEGAVEAIHENLLYLKTKEA 172 (217)
Q Consensus 147 ~~~l~~l~~~l~~i~~~q~~~~~re~ 172 (217)
.+.|+.|.++.+++..+-.-.+..-.
T Consensus 32 gekL~~L~~kt~~L~~~s~~F~~~A~ 57 (91)
T 3hd7_A 32 DQKLSELDDRADALQAGASQFETSAA 57 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666665544443333
No 73
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=34.56 E-value=77 Score=19.57 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=22.5
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 139 RKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA 172 (217)
Q Consensus 139 ~~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~ 172 (217)
++.++..++..+..+......+..+...++..-.
T Consensus 27 K~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~ 60 (70)
T 1gd2_E 27 KEDHLKALETQVVTLKELHSSTTLENDQLRQKVR 60 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888887776666666555554433
No 74
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=33.91 E-value=70 Score=18.45 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=13.3
Q ss_pred HHHHHhHHHHHHHhhHHHHHHHHHH
Q 027923 177 VSEKTNSRVAWYSLMSLGVCIVVSG 201 (217)
Q Consensus 177 ~~es~~~rv~~~si~~~~vli~~~~ 201 (217)
+.+.-=+...|.+++-+++++++++
T Consensus 24 Ty~gFi~~~k~gt~~~~~~ll~lai 48 (51)
T 1m56_D 24 TFAGFVRMVTWAAVVIVAALIFLAL 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334455566666666666554
No 75
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=33.05 E-value=58 Score=20.94 Aligned_cols=18 Identities=17% Similarity=0.206 Sum_probs=13.7
Q ss_pred cceEEEEecccceeeEEE
Q 027923 90 YGQFAFTTHEAGNYLACF 107 (217)
Q Consensus 90 ~~~~~f~~~~~G~y~iCf 107 (217)
...+.|++.+.|.|.+-.
T Consensus 68 ~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 68 EKNITVKPKSAGTYELIC 85 (100)
T ss_dssp EEEEEECCCSCEEEEEEC
T ss_pred ceeEEEecccCceEEEEC
Confidence 456788888999998644
No 76
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=32.87 E-value=92 Score=31.27 Aligned_cols=60 Identities=13% Similarity=0.248 Sum_probs=38.0
Q ss_pred CcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeeeeecc---ccce--EEEEec---ccceeeEEEEe
Q 027923 50 NVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHNRENV---TYGQ--FAFTTH---EAGNYLACFWV 109 (217)
Q Consensus 50 ~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~~~~~---~~~~--~~f~~~---~~G~y~iCf~n 109 (217)
|+.+.+..-+.+.+. +.+..+.+.|.||+|+.+.+..-. ..|- ++|..+ ..|.|++=...
T Consensus 141 GqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~ 209 (1661)
T 2b39_A 141 GSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYY 209 (1661)
T ss_dssp TSEEEEEEEEECTTSCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEE
T ss_pred CCEEEEEEEEECCCCcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEe
Confidence 566666655554321 123478999999999988764333 2453 344443 45999998864
No 77
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=32.73 E-value=57 Score=17.05 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=17.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 143 LEGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 143 ~~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
++.+++++..|.+.-+++.++...++
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk 28 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIK 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35667777777777777777665554
No 78
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=30.99 E-value=61 Score=16.92 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=15.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 144 EGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 144 ~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
+.+++++..|.+..++..++...++
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~ 28 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4566666666666666666655444
No 79
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=30.90 E-value=1.7e+02 Score=29.55 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=35.4
Q ss_pred CcEEEEEEEEeeCC-CCCCceEEEEEECCCCCeeeeeeccccceEEEEec---ccceeeEEEEe
Q 027923 50 NVVVLADYVVVSDD-HSHSPTISVKVTSPYGNNLHNRENVTYGQFAFTTH---EAGNYLACFWV 109 (217)
Q Consensus 50 ~~~i~~~y~v~~~~-~~~~~~i~~~v~~p~g~~v~~~~~~~~~~~~f~~~---~~G~y~iCf~n 109 (217)
|+.+.+..-+.+.+ .+.+..+.+.|.||+|+.+..+.-...-..+|..+ ..|.|+|....
T Consensus 140 GqtV~~rvi~~~~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~ 203 (1642)
T 3prx_B 140 GSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKY 203 (1642)
T ss_dssp TCEEEEEEEECCC-----CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEE
T ss_pred CCEEEEEEEEEcCCCcccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEe
Confidence 56655544444332 11234788999999999988764332223344443 45899988864
No 80
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=30.88 E-value=1e+02 Score=19.74 Aligned_cols=45 Identities=11% Similarity=0.198 Sum_probs=33.2
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 027923 141 EKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRV 185 (217)
Q Consensus 141 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv 185 (217)
+.++.+...+.+|......|..|.+..-..-++.-..++++..++
T Consensus 30 ~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 30 NNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888888888888887777766666666666666665
No 81
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=29.95 E-value=89 Score=18.84 Aligned_cols=18 Identities=6% Similarity=0.058 Sum_probs=13.3
Q ss_pred eEEEEEECCCCCeeeeee
Q 027923 69 TISVKVTSPYGNNLHNRE 86 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~~ 86 (217)
...+.+.+++|++|.+++
T Consensus 12 ~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 12 EYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp CEEEEEECTTSCEEEECC
T ss_pred CEEEEEEeCCCCEEEECC
Confidence 677888888888876543
No 82
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=29.31 E-value=1.4e+02 Score=20.42 Aligned_cols=55 Identities=9% Similarity=0.036 Sum_probs=36.8
Q ss_pred eEEEEEECCCCCeeeeeeccccceEEEEecccceeeEEEEeCCCCCCCCeEEEEEEEe
Q 027923 69 TISVKVTSPYGNNLHNRENVTYGQFAFTTHEAGNYLACFWVDGHNPGGGDVSVNIDWK 126 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~~~~~~~~~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f~~~ 126 (217)
...|.+++.+|+.+.++. ..|.+.+.--..|.|.+.=.-....+... ..+.|.+.
T Consensus 44 GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~i~ftV~ 98 (121)
T 2x5p_A 44 GATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPDGYEVA-TAITFTVN 98 (121)
T ss_dssp CCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCTTCCCC-CCEEEEEC
T ss_pred CCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCCCcccC-CCEEEEEc
Confidence 677899999999876554 46888888888999998754322222222 34556653
No 83
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=27.91 E-value=2.6e+02 Score=23.21 Aligned_cols=41 Identities=12% Similarity=0.250 Sum_probs=27.6
Q ss_pred eEEEEEECCCCCeeeeeecc-----------ccceEEEEecccceeeEEEEe
Q 027923 69 TISVKVTSPYGNNLHNRENV-----------TYGQFAFTTHEAGNYLACFWV 109 (217)
Q Consensus 69 ~i~~~v~~p~g~~v~~~~~~-----------~~~~~~f~~~~~G~y~iCf~n 109 (217)
++++.|++|+|..++..... .-.+..+..+..|.|++-+..
T Consensus 367 dldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~ 418 (434)
T 1wmd_A 367 DLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQA 418 (434)
T ss_dssp EEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEE
T ss_pred ccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEE
Confidence 89999999999876421110 112455566678999988864
No 84
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=27.59 E-value=74 Score=16.79 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=14.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 143 LEGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 143 ~~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
++.+++++..|...-.++.++...++
T Consensus 3 MnQLE~kVEeLl~~~~~Le~EV~RL~ 28 (36)
T 1kd8_A 3 VKQLEAEVEEIESEVWHLENEVARLE 28 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44566666666666555555554444
No 85
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=27.34 E-value=1.5e+02 Score=29.87 Aligned_cols=62 Identities=15% Similarity=0.171 Sum_probs=39.8
Q ss_pred CCcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeeeeecc-ccceEE---EEec---ccceeeEEEEeC
Q 027923 49 NNVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHNRENV-TYGQFA---FTTH---EAGNYLACFWVD 110 (217)
Q Consensus 49 ~~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~~~~~-~~~~~~---f~~~---~~G~y~iCf~n~ 110 (217)
.|+.+.+..-+.+.+. +.+..+.+.|.||+|+.+.++... ..|-++ |..+ ..|.|++=....
T Consensus 137 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~ 206 (1676)
T 3cu7_A 137 PDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYK 206 (1676)
T ss_dssp TTCEECEEEEEECTTCSCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBS
T ss_pred CCCEEEEEEEEECCCCcccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEec
Confidence 3677766665555431 123478999999999988766422 345544 3333 469999998753
No 86
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=27.16 E-value=2.4e+02 Score=22.62 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=53.5
Q ss_pred hcceeEEEEEcCCCcceEeeeccCCcEEEEEEEEeeCCC------------CCCceEEEEEECCCCCeeeeeec-----c
Q 027923 26 IVSDAIWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDH------------SHSPTISVKVTSPYGNNLHNREN-----V 88 (217)
Q Consensus 26 ~~~~~l~~~l~~~~~~Cf~~~v~~~~~i~~~y~v~~~~~------------~~~~~i~~~v~~p~g~~v~~~~~-----~ 88 (217)
.|.-.+.+.+.+. +.+..++.+.+...+...+. +....--+.|.|++++.++.-+. .
T Consensus 217 ~P~l~v~~~v~~~------~~i~~~~~~~l~v~l~~~~~~~~~v~aP~fp~~k~e~wwi~v~d~~~~~ll~~~r~~l~~~ 290 (339)
T 2q0z_X 217 YPNIELSYEVVDK------DSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQK 290 (339)
T ss_dssp SCCEEEEEEETTG------GGCBTTSEEEEEEEEEECSSCCSSCCCTTCSSCCCCCEEEEEEETTTTEEEEEEEECCSSE
T ss_pred CCcEEEEEEEccC------ccccCCCcEEEEEEEEECCCCCCceeCCCCCCCCCCcEEEEEEECCCCEEEEEEEEecccc
Confidence 3556667777643 23556666666665543210 01134556777888776543221 1
Q ss_pred ccceEEEEecccceeeEEEEeCCCCCCCCeEEEEEEEeec
Q 027923 89 TYGQFAFTTHEAGNYLACFWVDGHNPGGGDVSVNIDWKTG 128 (217)
Q Consensus 89 ~~~~~~f~~~~~G~y~iCf~n~~~~~~~~~~~v~f~~~~g 128 (217)
..-+..|+++..|.|.+++..-+..|-+.+..+.+.+++.
T Consensus 291 ~~~~l~f~~P~~g~~~~~v~~vSD~ylG~D~~~~i~~~v~ 330 (339)
T 2q0z_X 291 AKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVK 330 (339)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEESSCSSCCEEEEEEEEEB
T ss_pred eEEEEEEECCCCCCeeEEEEEEcccccCcceEEEEEEEEe
Confidence 2346789999888777766543333323345555665554
No 87
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=27.06 E-value=1.4e+02 Score=19.77 Aligned_cols=44 Identities=11% Similarity=-0.002 Sum_probs=28.2
Q ss_pred ceEeeeccCCcEEEEEEEEeeCCC-CCCceEEEEEECCCCCeeee
Q 027923 41 KCVSEEIQNNVVVLADYVVVSDDH-SHSPTISVKVTSPYGNNLHN 84 (217)
Q Consensus 41 ~Cf~~~v~~~~~i~~~y~v~~~~~-~~~~~i~~~v~~p~g~~v~~ 84 (217)
-=|.-.+..|+.+.+..++.+... .+-..+...+.+.+|+++.+
T Consensus 82 ~rf~~Pv~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~n~~g~~v~~ 126 (134)
T 1iq6_A 82 LSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFTQGGALAVT 126 (134)
T ss_dssp EEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEECTTSCEEEE
T ss_pred EEEcCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEeCCCCEEEE
Confidence 345556777999999888875321 11224566677788887654
No 88
>2wy3_B UL16, uncharacterized protein UL16; immune system-viral protein complex, immune response, innate immunity, structural mimicry; HET: NAG PEU; 1.80A {Human herpesvirus 5 strain AD169}
Probab=26.91 E-value=93 Score=21.37 Aligned_cols=38 Identities=5% Similarity=0.202 Sum_probs=27.6
Q ss_pred ceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeee
Q 027923 41 KCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLH 83 (217)
Q Consensus 41 ~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~ 83 (217)
-|+|+++.+++.+-+.|..... ..-++..++- +|.++.
T Consensus 37 icyy~nvt~dei~gvaf~~q~n----es~~d~wly~-n~t~ir 74 (158)
T 2wy3_B 37 ICYYENVTEDEIIGVAFTWQHN----ESVVDLWLYQ-NDTVIR 74 (158)
T ss_dssp EEEEESCCTTCBEEEEEEETTC----TTCEEEEEEE-TTEEEE
T ss_pred EEEecccCccceEEEEEEeecC----chhhhheeee-CCcEEe
Confidence 6999999999999998876543 2367777763 555443
No 89
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=26.19 E-value=2.1e+02 Score=22.06 Aligned_cols=24 Identities=13% Similarity=0.183 Sum_probs=15.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHH
Q 027923 142 KLEGVELELRKLEGAVEAIHENLL 165 (217)
Q Consensus 142 ~~~~l~~~l~~l~~~l~~i~~~q~ 165 (217)
.++.+++.+..|++.+.+|.+...
T Consensus 7 Rvd~~EErIs~le~rleei~q~eq 30 (233)
T 2yko_A 7 RCDQLEERVSAAEDEINEIKREGK 30 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777777777777766443
No 90
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=25.63 E-value=93 Score=17.24 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=12.6
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 027923 144 EGVELELRKLEGAVEAIHEN 163 (217)
Q Consensus 144 ~~l~~~l~~l~~~l~~i~~~ 163 (217)
+.++.++..|+++|..+...
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35666666666666666554
No 91
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=25.06 E-value=22 Score=16.79 Aligned_cols=10 Identities=50% Similarity=0.962 Sum_probs=7.2
Q ss_pred HHHHHhhhcc
Q 027923 206 HLKRFFQKKK 215 (217)
Q Consensus 206 ~lk~fF~~kk 215 (217)
.|.||++++|
T Consensus 4 SLqRFleKRk 13 (22)
T 3ogk_Q 4 SLHRFLEKRK 13 (26)
T ss_pred hHHHHHHHHH
Confidence 4778887765
No 92
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=25.03 E-value=74 Score=15.94 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHHHHH
Q 027923 145 GVELELRKLEGAVEAIH 161 (217)
Q Consensus 145 ~l~~~l~~l~~~l~~i~ 161 (217)
.+++.+.+|+..++.++
T Consensus 3 rlee~~r~l~~ivq~lq 19 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQ 19 (32)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34555555554444433
No 93
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=24.02 E-value=1.4e+02 Score=18.64 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=25.1
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 140 KEKLEGVELELRKLEGAVEAIHENLLYLKTK 170 (217)
Q Consensus 140 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~r 170 (217)
.+.++-+.+.+..|.++...+..+-.++|..
T Consensus 14 REEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 14 REEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4667888899999999988888888877743
No 94
>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}
Probab=23.75 E-value=1.3e+02 Score=18.10 Aligned_cols=46 Identities=9% Similarity=0.145 Sum_probs=34.7
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 027923 141 EKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSRVA 186 (217)
Q Consensus 141 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~r~~~es~~~rv~ 186 (217)
+.++.+...+.+|......|..+.+.+-.+-.+.-..++.+..++.
T Consensus 10 ~nLd~l~~~~~rlk~ma~~mg~Eid~QN~~ldrI~~k~d~~d~ri~ 55 (64)
T 3b5n_D 10 RNLDQIQQVSNRLKKMALTTGKELDSQQKRLNNIEESTDDLDINLH 55 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466777788888888888888888877777777777777777653
No 95
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=23.44 E-value=89 Score=16.29 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=12.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 144 EGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 144 ~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
+.+++++..|...=.++.++...++
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk 28 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIK 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHH
Confidence 4455555555555555555544433
No 96
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=23.28 E-value=1.9e+02 Score=20.04 Aligned_cols=44 Identities=16% Similarity=0.070 Sum_probs=27.0
Q ss_pred ceEeeeccCCcEEEEEEEEeeCCC----CCCceEEEEEECCCCCeeee
Q 027923 41 KCVSEEIQNNVVVLADYVVVSDDH----SHSPTISVKVTSPYGNNLHN 84 (217)
Q Consensus 41 ~Cf~~~v~~~~~i~~~y~v~~~~~----~~~~~i~~~v~~p~g~~v~~ 84 (217)
-=|.-.+..|+.+.+...+.+... ..-..+.+.+.+.+|+++.+
T Consensus 101 ~rF~~PV~~Gd~l~~~~~v~~~~~~~~~~~~v~~~~~~~n~~g~~v~~ 148 (161)
T 1q6w_A 101 VRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYKLEVKNQRGELVLT 148 (161)
T ss_dssp EEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEeCCCCEEEE
Confidence 345557777999988888764210 11224556667778877654
No 97
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=22.97 E-value=3.7e+02 Score=23.25 Aligned_cols=42 Identities=12% Similarity=0.260 Sum_probs=31.7
Q ss_pred ceEEEEEECCCCCeeeeeecc--ccceEEEEecccceeeEEEEe
Q 027923 68 PTISVKVTSPYGNNLHNRENV--TYGQFAFTTHEAGNYLACFWV 109 (217)
Q Consensus 68 ~~i~~~v~~p~g~~v~~~~~~--~~~~~~f~~~~~G~y~iCf~n 109 (217)
.++++.+++|+|..+...... ...+..+..+..|+|.+-+..
T Consensus 459 ~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~ 502 (539)
T 3afg_A 459 SDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVS 502 (539)
T ss_dssp CEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEE
T ss_pred CCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEe
Confidence 489999999999987554322 123566788889999999975
No 98
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=22.95 E-value=1.8e+02 Score=19.75 Aligned_cols=66 Identities=8% Similarity=0.004 Sum_probs=41.7
Q ss_pred CCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCC--Ceeeeeeccc-cceEEEEecccceeeEEEEe
Q 027923 38 TGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYG--NNLHNRENVT-YGQFAFTTHEAGNYLACFWV 109 (217)
Q Consensus 38 ~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g--~~v~~~~~~~-~~~~~f~~~~~G~y~iCf~n 109 (217)
.....|..++++...|.+++.-.. ..+++..+++.++ +.+....... .-.-+|.+. +|.|-+.+..
T Consensus 38 D~~D~y~f~v~~~g~v~I~l~~~~-----~~~~~w~ly~~~dl~nyv~y~~~~gn~~~~~~~~~-pGkYYl~Vy~ 106 (119)
T 1nqj_A 38 DSRDYYSFEVKEEGEVNIELDKKD-----EFGVTWTLHPESNINDRITYGQVDGNKVSNKVKLR-PGKYYLLVYK 106 (119)
T ss_dssp CCEEEEEEEESSCEEEEEEEEESS-----SSEEEEEEEECC----CCEECEEETTEEEEEEEEC-SEEEEEEEEE
T ss_pred CCcEEEEEECCCCCeEEEEEEeCC-----CCCEEEEEEccCCCccceEEeecCCCcEEEEEEcC-CcEEEEEEEE
Confidence 347888889999888888775443 2478888998877 4443221111 111245555 9999999874
No 99
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=22.56 E-value=92 Score=16.10 Aligned_cols=25 Identities=4% Similarity=-0.007 Sum_probs=13.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 027923 144 EGVELELRKLEGAVEAIHENLLYLK 168 (217)
Q Consensus 144 ~~l~~~l~~l~~~l~~i~~~q~~~~ 168 (217)
+.+++++..+...-+++.++...++
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3556666665555555555544433
No 100
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=22.27 E-value=1.4e+02 Score=17.93 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhHH
Q 027923 145 GVELELRKLEGAVEAIHENLLYLK---TKEAEMREVSEKTNSR 184 (217)
Q Consensus 145 ~l~~~l~~l~~~l~~i~~~q~~~~---~re~~~r~~~es~~~r 184 (217)
.+.+.+-.|.+.+.+++.+..+++ ..|.+.|...|..=.+
T Consensus 4 SLVDtVYalkDev~eLk~e~k~~k~~le~eqraRk~LE~~vrk 46 (61)
T 3l4f_A 4 SLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRK 46 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777776655 3344555555544443
No 101
>2lif_A Core protein P21; signal peptide, E1 envelope protein, transmemb membrane protein, viral protein; NMR {Hepatitis c virus jfh-1}
Probab=27.80 E-value=19 Score=17.95 Aligned_cols=20 Identities=15% Similarity=0.273 Sum_probs=10.9
Q ss_pred hHHHHHHHHHHHHhhcceeE
Q 027923 12 LFPVFFAFYFTINAIVSDAI 31 (217)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l 31 (217)
.+++|++-++..+..++.++
T Consensus 5 sfsiFlLaLlscLt~Pasa~ 24 (27)
T 2lif_A 5 PFSIFLLALLSCITVPVSAA 24 (27)
Confidence 34555544455566666654
No 102
>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*
Probab=21.77 E-value=2.2e+02 Score=20.15 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=29.8
Q ss_pred eEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECCCCCeeee
Q 027923 42 CVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSPYGNNLHN 84 (217)
Q Consensus 42 Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p~g~~v~~ 84 (217)
=|.-.++.|+.+.+.-++...+. ....+.+.|++++|+++..
T Consensus 108 ~flrpv~~G~~l~a~a~v~~~gr-~~~~~~~~i~~~~g~lvA~ 149 (163)
T 3lbe_A 108 NYLKSGKLGDTLLIDGRCVHDGR-TTKVVDVTVTNQLKQEVAK 149 (163)
T ss_dssp EECSCCCTTCEEEEEEEEEEECS-SEEEEEEEEECTTCCEEEE
T ss_pred EEecCCCCCCEEEEEEEEEEcCC-cEEEEEEEEEeCCCCEEEE
Confidence 35556666888888888887542 2347788889988887754
No 103
>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A
Probab=20.56 E-value=2.1e+02 Score=19.46 Aligned_cols=74 Identities=9% Similarity=0.048 Sum_probs=41.7
Q ss_pred cccchhhHHHHHHHHHHHHhh---cceeEEEEEcCCCcceEeeeccCCcEEEEEEEEeeCCCCCCceEEEEEECC-CCCe
Q 027923 6 NVHGEVLFPVFFAFYFTINAI---VSDAIWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDHSHSPTISVKVTSP-YGNN 81 (217)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~i~~~v~~p-~g~~ 81 (217)
.+||-++..++=..+..++.. ....++..+ .-=|.-.++.|+.+.+.-++...+. ....+++.|++. +|++
T Consensus 54 ~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l----~i~fl~p~~~G~~l~~~a~v~~~g~-~~~~~~~~i~~~~~g~l 128 (148)
T 3f5o_A 54 TLHGGLTATLVDNISTMALLCTERGAPGVSVDM----NITYMSPAKLGEDIVITAHVLKQGK-TLAFTSVDLTNKATGKL 128 (148)
T ss_dssp BBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEE----EEEECSCCBTTCEEEEEEEEEEECS-SEEEEEEEEEETTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCcEEEEEE----EEEEeCCCCCCCEEEEEEEEEEcCC-eEEEEEEEEEECCCCeE
Confidence 467765555544332222221 122333333 1335556666888888888876542 234778888887 7887
Q ss_pred eee
Q 027923 82 LHN 84 (217)
Q Consensus 82 v~~ 84 (217)
+..
T Consensus 129 va~ 131 (148)
T 3f5o_A 129 IAQ 131 (148)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
Done!