Query 027925
Match_columns 217
No_of_seqs 343 out of 1529
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 03:34:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027925.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027925hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 7.5E-29 1.6E-33 222.1 6.4 129 75-215 3-147 (371)
2 KOG0713 Molecular chaperone (D 99.9 1.1E-23 2.4E-28 185.1 7.4 71 73-149 13-83 (336)
3 PRK14296 chaperone protein Dna 99.9 2.8E-23 6.2E-28 188.4 5.5 132 75-214 3-153 (372)
4 PRK14288 chaperone protein Dna 99.9 3.4E-23 7.4E-28 187.7 5.8 125 76-214 3-144 (369)
5 KOG0712 Molecular chaperone (D 99.9 1.5E-22 3.2E-27 179.5 5.9 129 75-216 3-133 (337)
6 PRK14286 chaperone protein Dna 99.9 1.9E-22 4.2E-27 183.0 3.8 129 75-214 3-154 (372)
7 PRK14287 chaperone protein Dna 99.8 1.5E-21 3.3E-26 177.1 5.6 124 75-214 3-142 (371)
8 PTZ00037 DnaJ_C chaperone prot 99.8 2.3E-21 5E-26 178.3 6.4 127 74-214 26-154 (421)
9 PRK14298 chaperone protein Dna 99.8 1.5E-21 3.3E-26 177.4 5.2 129 75-214 4-145 (377)
10 PRK14282 chaperone protein Dna 99.8 2.4E-21 5.2E-26 175.7 5.4 130 75-214 3-156 (369)
11 PRK14285 chaperone protein Dna 99.8 1.2E-21 2.6E-26 177.4 3.0 132 76-214 3-150 (365)
12 PRK14301 chaperone protein Dna 99.8 3.3E-21 7.1E-26 175.0 5.6 129 75-214 3-148 (373)
13 PRK14276 chaperone protein Dna 99.8 1.5E-21 3.2E-26 177.7 3.2 130 75-214 3-150 (380)
14 PRK14294 chaperone protein Dna 99.8 5.8E-21 1.3E-25 173.0 6.2 129 75-214 3-148 (366)
15 PRK14278 chaperone protein Dna 99.8 7.4E-21 1.6E-25 173.0 5.2 124 76-214 3-143 (378)
16 PRK14280 chaperone protein Dna 99.8 9.1E-21 2E-25 172.3 5.6 129 75-214 3-147 (376)
17 PRK14297 chaperone protein Dna 99.8 1.1E-20 2.4E-25 172.0 5.8 130 75-214 3-152 (380)
18 PRK10767 chaperone protein Dna 99.8 1.4E-20 2.9E-25 170.8 5.7 128 75-214 3-146 (371)
19 PRK14284 chaperone protein Dna 99.8 1.1E-20 2.4E-25 172.5 4.7 69 76-150 1-69 (391)
20 PRK14279 chaperone protein Dna 99.8 2.9E-20 6.3E-25 169.8 7.1 69 75-149 8-76 (392)
21 KOG0715 Molecular chaperone (D 99.8 2.9E-20 6.2E-25 163.4 6.2 125 76-215 43-169 (288)
22 PRK14281 chaperone protein Dna 99.8 1.7E-20 3.8E-25 171.5 4.4 132 76-214 3-167 (397)
23 KOG0719 Molecular chaperone (D 99.8 2.3E-19 4.9E-24 150.7 9.5 103 74-181 12-114 (264)
24 PRK14290 chaperone protein Dna 99.8 7.2E-20 1.6E-24 165.8 6.4 70 76-150 3-72 (365)
25 KOG0717 Molecular chaperone (D 99.8 3.5E-19 7.5E-24 161.6 9.2 72 73-149 5-76 (508)
26 PRK14283 chaperone protein Dna 99.8 2.3E-19 5E-24 163.2 7.7 69 75-150 4-72 (378)
27 PRK14277 chaperone protein Dna 99.8 2.7E-19 5.9E-24 163.2 8.1 70 75-150 4-73 (386)
28 TIGR02349 DnaJ_bact chaperone 99.8 4.9E-20 1.1E-24 166.2 3.3 127 77-214 1-147 (354)
29 PF00226 DnaJ: DnaJ domain; I 99.8 3.9E-19 8.4E-24 122.2 5.9 64 77-145 1-64 (64)
30 PRK14299 chaperone protein Dna 99.8 4.1E-19 8.9E-24 156.4 7.6 69 75-150 3-71 (291)
31 PRK14291 chaperone protein Dna 99.8 4.6E-19 1E-23 161.4 7.6 69 75-150 2-70 (382)
32 KOG0691 Molecular chaperone (D 99.8 7.3E-19 1.6E-23 154.3 8.2 75 75-155 4-78 (296)
33 PRK14295 chaperone protein Dna 99.8 5.7E-19 1.2E-23 161.2 7.6 133 75-214 8-170 (389)
34 PRK14292 chaperone protein Dna 99.8 3.9E-19 8.4E-24 161.3 6.1 68 76-150 2-69 (371)
35 KOG0716 Molecular chaperone (D 99.8 5E-19 1.1E-23 151.6 6.2 69 75-149 30-98 (279)
36 PRK14293 chaperone protein Dna 99.8 4.3E-19 9.2E-24 161.3 6.1 68 76-150 3-70 (374)
37 PRK14289 chaperone protein Dna 99.7 3.8E-18 8.2E-23 155.6 7.9 70 75-150 4-73 (386)
38 KOG0718 Molecular chaperone (D 99.7 3E-18 6.6E-23 155.7 6.3 77 74-153 7-83 (546)
39 PRK14300 chaperone protein Dna 99.7 4.1E-18 9E-23 154.7 7.0 68 76-150 3-70 (372)
40 PRK10266 curved DNA-binding pr 99.7 7.6E-18 1.6E-22 149.3 7.1 66 76-148 4-69 (306)
41 PTZ00341 Ring-infected erythro 99.7 1.8E-17 4E-22 161.7 9.8 73 73-152 570-642 (1136)
42 smart00271 DnaJ DnaJ molecular 99.7 8.2E-17 1.8E-21 108.9 6.5 59 76-139 1-59 (60)
43 cd06257 DnaJ DnaJ domain or J- 99.7 2.7E-16 5.8E-21 104.5 6.7 55 77-137 1-55 (55)
44 PHA03102 Small T antigen; Revi 99.7 2.1E-16 4.6E-21 126.7 6.8 71 75-155 4-76 (153)
45 KOG0721 Molecular chaperone (D 99.6 2.9E-16 6.2E-21 130.9 7.4 75 74-154 97-171 (230)
46 PRK01356 hscB co-chaperone Hsc 99.6 1.2E-15 2.5E-20 124.4 7.7 71 76-149 2-74 (166)
47 COG2214 CbpA DnaJ-class molecu 99.6 9.3E-16 2E-20 126.1 7.1 68 74-147 4-72 (237)
48 PRK05014 hscB co-chaperone Hsc 99.6 4E-15 8.8E-20 121.7 10.7 73 76-149 1-75 (171)
49 TIGR03835 termin_org_DnaJ term 99.6 1.7E-15 3.6E-20 145.3 9.1 69 76-151 2-70 (871)
50 PRK03578 hscB co-chaperone Hsc 99.6 1.1E-14 2.4E-19 119.6 11.7 73 75-148 5-79 (176)
51 PRK00294 hscB co-chaperone Hsc 99.6 8.8E-15 1.9E-19 119.9 7.8 75 74-149 2-78 (173)
52 KOG0624 dsRNA-activated protei 99.6 4.1E-15 8.8E-20 132.1 5.7 76 72-150 390-465 (504)
53 KOG0550 Molecular chaperone (D 99.5 1.5E-14 3.2E-19 130.7 4.2 92 71-167 368-459 (486)
54 KOG0720 Molecular chaperone (D 99.4 7.7E-14 1.7E-18 127.1 5.2 69 74-149 233-301 (490)
55 PRK09430 djlA Dna-J like membr 99.4 1.7E-13 3.7E-18 119.5 5.9 65 73-137 197-262 (267)
56 KOG0722 Molecular chaperone (D 99.4 1.6E-13 3.5E-18 117.0 3.9 71 72-149 29-99 (329)
57 PHA02624 large T antigen; Prov 99.4 8.7E-13 1.9E-17 125.2 7.9 83 74-166 9-96 (647)
58 KOG0714 Molecular chaperone (D 99.4 4.1E-13 8.9E-18 115.4 5.1 70 75-149 2-71 (306)
59 PRK01773 hscB co-chaperone Hsc 99.4 1.5E-12 3.2E-17 106.8 7.2 73 76-149 2-76 (173)
60 PTZ00100 DnaJ chaperone protei 99.4 1E-12 2.2E-17 100.7 5.7 53 74-136 63-115 (116)
61 COG5407 SEC63 Preprotein trans 99.3 3E-12 6.5E-17 116.6 5.7 79 74-153 96-174 (610)
62 TIGR00714 hscB Fe-S protein as 99.2 5E-11 1.1E-15 96.4 6.8 62 87-149 2-63 (157)
63 KOG1150 Predicted molecular ch 99.0 4.4E-10 9.6E-15 93.0 5.3 64 75-143 52-115 (250)
64 COG5269 ZUO1 Ribosome-associat 98.9 1.2E-09 2.7E-14 94.2 6.1 71 74-148 41-114 (379)
65 KOG1789 Endocytosis protein RM 98.5 2.1E-07 4.5E-12 92.5 6.0 63 66-137 1271-1337(2235)
66 KOG0568 Molecular chaperone (D 98.4 3.3E-07 7.1E-12 77.8 3.7 58 74-138 45-103 (342)
67 KOG0723 Molecular chaperone (D 98.3 1.8E-06 3.8E-11 64.9 5.1 54 75-138 55-108 (112)
68 KOG3192 Mitochondrial J-type c 97.9 3.2E-05 7E-10 61.9 7.0 74 73-147 5-80 (168)
69 COG1076 DjlA DnaJ-domain-conta 97.4 7.9E-05 1.7E-09 61.1 2.6 63 73-135 110-173 (174)
70 KOG0431 Auxilin-like protein a 97.0 0.00067 1.5E-08 63.5 4.2 53 84-136 396-449 (453)
71 COG1076 DjlA DnaJ-domain-conta 97.0 0.00047 1E-08 56.5 2.5 72 77-149 2-75 (174)
72 PF03656 Pam16: Pam16; InterP 95.3 0.04 8.6E-07 43.1 5.2 57 74-140 56-112 (127)
73 PF14687 DUF4460: Domain of un 87.1 1.3 2.7E-05 33.9 4.6 51 87-139 5-55 (112)
74 PF11833 DUF3353: Protein of u 86.3 1.7 3.7E-05 36.3 5.4 40 85-138 1-40 (194)
75 PF13446 RPT: A repeated domai 86.2 1.4 3.1E-05 29.5 4.0 28 75-102 4-31 (62)
76 KOG0724 Zuotin and related mol 82.7 1.4 2.9E-05 39.5 3.5 59 88-148 4-62 (335)
77 PF07709 SRR: Seven Residue Re 50.5 11 0.00023 17.9 1.1 13 124-136 2-14 (14)
78 COG5552 Uncharacterized conser 42.3 1E+02 0.0022 22.0 5.4 35 76-110 3-37 (88)
79 KOG3442 Uncharacterized conser 39.2 72 0.0016 24.9 4.7 36 76-111 59-94 (132)
80 cd00084 HMG-box High Mobility 35.5 1.1E+02 0.0023 19.6 4.7 42 94-146 12-53 (66)
81 cd01388 SOX-TCF_HMG-box SOX-TC 33.8 1.1E+02 0.0023 20.7 4.5 41 95-146 14-54 (72)
82 cd01390 HMGB-UBF_HMG-box HMGB- 29.2 1.5E+02 0.0033 19.0 4.6 39 97-146 15-53 (66)
83 PF12434 Malate_DH: Malate deh 27.3 73 0.0016 18.1 2.2 17 90-106 10-26 (28)
84 PF10041 DUF2277: Uncharacteri 26.7 2.4E+02 0.0052 20.1 5.6 34 77-110 4-37 (78)
85 cd01389 MATA_HMG-box MATA_HMG- 26.4 1.6E+02 0.0035 20.0 4.5 42 94-146 13-54 (77)
86 COG2879 Uncharacterized small 22.3 2E+02 0.0042 19.8 4.0 28 96-131 27-54 (65)
87 PF08447 PAS_3: PAS fold; Int 20.0 30 0.00064 23.5 -0.4 29 76-108 6-35 (91)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=7.5e-29 Score=222.14 Aligned_cols=129 Identities=32% Similarity=0.451 Sum_probs=105.2
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||++|++||++|+.....
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~------~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~ 76 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD------KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKA 76 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhCCHHHHHHhhccCcccccc
Confidence 58999999999999999999999999999999999863 679999999999999999999999999999877652
Q ss_pred chhHHHHHHHHHhhhcc-ccchHHHHHHHHhH------HH---------HHHHHHHHHhcCCCCcccccccccccCC
Q 027925 155 ASQAWMEWLIKKRKAFD-QRGDMAIAAWAEQQ------QL---------ELNLRARRLSRSKVSNNFEFSAVEECSR 215 (217)
Q Consensus 155 ~~~~~~~~~~~~~~~f~-~~~~~~~~~~~~~~------~~---------~~~~~~~~l~~~~~d~~~e~~~~~~c~~ 215 (217)
.+.+. . ...+|+ +++|+|.++|++.. .+ .+.+.|+++.. +...+|++...+.|.+
T Consensus 77 gg~gg--~---g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~-G~~~~i~~~~~~~C~~ 147 (371)
T COG0484 77 GGFGG--F---GFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVF-GVKKEIRVTRSVTCST 147 (371)
T ss_pred CCcCC--C---CcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhcc-CceeeEecceeeECCc
Confidence 22110 0 112344 47888888884221 11 16778889888 9999999999999975
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.1e-23 Score=185.10 Aligned_cols=71 Identities=41% Similarity=0.650 Sum_probs=67.6
Q ss_pred CCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
...+|||+||||+++|+..|||+|||+||++||||+|+++ +.|++.|++|+.||+||+||++|+.||.+|.
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd------p~A~e~F~~in~AYEVLsDpekRk~YD~~GE 83 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD------PNANEKFKEINAAYEVLSDPEKRKHYDTYGE 83 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhH
Confidence 3468999999999999999999999999999999999996 8899999999999999999999999999985
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=2.8e-23 Score=188.41 Aligned_cols=132 Identities=27% Similarity=0.454 Sum_probs=96.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+||++||||++++ +.|+++|++|++||+||+||++|+.||++|......
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-------~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~ 75 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-------PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDG 75 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcC
Confidence 4799999999999999999999999999999999864 358899999999999999999999999988642211
Q ss_pred --c---h-hHHHHHHHHHh-hhccccchHHHHHHHHh------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 --A---S-QAWMEWLIKKR-KAFDQRGDMAIAAWAEQ------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 --~---~-~~~~~~~~~~~-~~f~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. + .++.++|..+. .+|..++|+|..+|++. ...++.+.++++.. +....+.+.....|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~-G~~~~i~~~~~~~C~ 153 (372)
T PRK14296 76 SSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLF-GVDKIIELDLLTNCS 153 (372)
T ss_pred CCCcCcCCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhC-CeeEEEEEeeeeccC
Confidence 0 0 11111111110 02334556666666521 11236778888887 888899888887776
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=3.4e-23 Score=187.72 Aligned_cols=125 Identities=29% Similarity=0.452 Sum_probs=91.8
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc-
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK- 154 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~- 154 (217)
.|||+||||+++||.+|||+|||+||++||||+++.+ ++|+++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~------~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~ 76 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD------KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA 76 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC
Confidence 7999999999999999999999999999999999753 458999999999999999999999999988643211
Q ss_pred ch--hHHHHHHHHHhhhccccchHHHHHHHH--------------hHHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 AS--QAWMEWLIKKRKAFDQRGDMAIAAWAE--------------QQQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~~--~~~~~~~~~~~~~f~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.. .++.++ |+.++++|..+|+. .....+.+.++++.. +....+.+.....|.
T Consensus 77 ~~~~~~~~~~-------f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~-G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 77 GASQSDFSDF-------FEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVF-GCKKTIKVQYQSVCE 144 (369)
T ss_pred CCCccccccc-------hhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhC-CeEEEEEEEeeccCC
Confidence 10 111111 22222333332321 112236778888887 888888888777774
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=1.5e-22 Score=179.53 Aligned_cols=129 Identities=29% Similarity=0.375 Sum_probs=91.8
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
...||+||||+++|+.+|||+|||+|+++||||+|++ +.++|++|..||+||+||++|+.||++|......
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---------~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~ 73 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---------AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQG 73 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---------HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcc
Confidence 5789999999999999999999999999999999977 6899999999999999999999999998755533
Q ss_pred chhH--HHHHHHHHhhhccccchHHHHHHHHhHHHHHHHHHHHHhcCCCCcccccccccccCCC
Q 027925 155 ASQA--WMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKVSNNFEFSAVEECSRS 216 (217)
Q Consensus 155 ~~~~--~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~~~ 216 (217)
++.+ ... |..+.. |++.+...... +...-.++.+.+++|-. +....+..+....|+.+
T Consensus 74 g~~~~g~~~-f~~~F~-~g~~~~~~~~r-g~~~~~~~~~~Le~~y~-G~s~kl~l~~~~iCs~C 133 (337)
T KOG0712|consen 74 GGGGGGFGG-FSQFFG-FGGNGGRGRQR-GKDVVHQLKVTLEELYM-GKSKKLFLSRNFICSKC 133 (337)
T ss_pred cCCCCCCcc-HHHhcc-CCCcCcccccc-CCCceEEEEEEHHHhhc-CCccceecccCccCCcC
Confidence 2221 101 111110 11111111000 11111225567888887 78888888888888854
No 6
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.9e-22 Score=183.02 Aligned_cols=129 Identities=29% Similarity=0.490 Sum_probs=94.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ ++++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~ 76 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN------KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA 76 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcc
Confidence 47999999999999999999999999999999998753 568999999999999999999999999987643211
Q ss_pred c----h-hHHHHHHHHHhhhccccchHHHHHHHHh------------------HHHHHHHHHHHHhcCCCCccccccccc
Q 027925 155 A----S-QAWMEWLIKKRKAFDQRGDMAIAAWAEQ------------------QQLELNLRARRLSRSKVSNNFEFSAVE 211 (217)
Q Consensus 155 ~----~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~~~d~~~e~~~~~ 211 (217)
. + ..+..+ ...|+.++|+|..+|+++ ...++.+.++++.. +....+.+....
T Consensus 77 ~~~~~~~~~~~~~----~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~-G~~k~i~~~r~~ 151 (372)
T PRK14286 77 GAGGFGQGAYTDF----SDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAAL-GREYKIEIPRLE 151 (372)
T ss_pred ccCCCCCCCcccc----cccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhC-CeeEEEEeeccc
Confidence 0 0 000000 001233445555555321 11225678888887 888999888888
Q ss_pred ccC
Q 027925 212 ECS 214 (217)
Q Consensus 212 ~c~ 214 (217)
.|+
T Consensus 152 ~C~ 154 (372)
T PRK14286 152 SCV 154 (372)
T ss_pred cCC
Confidence 775
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.5e-21 Score=177.06 Aligned_cols=124 Identities=27% Similarity=0.465 Sum_probs=90.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~ 75 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-------PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQ 75 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccc
Confidence 4799999999999999999999999999999999864 358899999999999999999999999998643221
Q ss_pred c--hhHHHHHHHHHhhhccccchHHHHHHHHh--------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 A--SQAWMEWLIKKRKAFDQRGDMAIAAWAEQ--------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. +.+. .+|.+++|+|..+|+++ ...++.+.++++.. +....+.+.....|+
T Consensus 76 ~~~~~~~--------~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~-G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 76 GFGGGGA--------GDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVF-GKETEIEIPREETCG 142 (371)
T ss_pred ccCCCCC--------ccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcC-CeEEEEEEeeeccCC
Confidence 1 0000 01222334444444321 11124567777776 788888888887775
No 8
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.84 E-value=2.3e-21 Score=178.26 Aligned_cols=127 Identities=25% Similarity=0.316 Sum_probs=88.4
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (217)
...|||+||||+++|+.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||.+|.....
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----------~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~ 95 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----------PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLE 95 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----------HHHHHHHHHHHHHhccHHHHHHHhhhcchhcc
Confidence 35899999999999999999999999999999999742 48999999999999999999999998764322
Q ss_pred cc--hhHHHHHHHHHhhhccccchHHHHHHHHhHHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 154 KA--SQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 154 ~~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.. ..++.+.|..+ |++.+......-+......+.+.++++.. +....+.+.....|+
T Consensus 96 ~~~~~~d~~d~f~~~---Fggg~~~~~~~rg~di~~~l~vtLee~~~-G~~~~i~~~r~~~C~ 154 (421)
T PTZ00037 96 GGEQPADASDLFDLI---FGGGRKPGGKKRGEDIVSHLKVTLEQIYN-GAMRKLAINKDVICA 154 (421)
T ss_pred cCCCCcchhhhHHHh---hccccccccccCCCCEEEEeeeeHHHHhC-CCceEEEeecccccc
Confidence 11 11122222211 22100000000000112236678888887 888999998888885
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.5e-21 Score=177.38 Aligned_cols=129 Identities=32% Similarity=0.444 Sum_probs=93.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..++++|++|++||+||+||.+|+.||++|......
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~ 76 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-------PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN 76 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-------hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccc
Confidence 4799999999999999999999999999999999864 347899999999999999999999999988643221
Q ss_pred chhHHHHHHHHHhhhccccchHHHHHHHHh-------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAEQ-------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.... ...+. ..+|++++|+|..+|++. ...++.+.++++.. +....+.+.....|.
T Consensus 77 ~~~~-~~~~~--~~~~~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~-G~~~~i~~~r~~~C~ 145 (377)
T PRK14298 77 QYSA-EDIFR--GADFGGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAF-GVRKDIDVPRAERCS 145 (377)
T ss_pred ccCc-ccccc--cCCcCcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhC-CeEEEEEEEeeccCC
Confidence 0000 00000 012344556666666521 01125567777777 888888888877775
No 10
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=2.4e-21 Score=175.67 Aligned_cols=130 Identities=31% Similarity=0.461 Sum_probs=92.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++.. ...++++|++|++||+||+||.+|+.||+++......
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~ 77 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-----RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQP 77 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc-----hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccc
Confidence 47999999999999999999999999999999998652 2458999999999999999999999999987643211
Q ss_pred ------chhH-HHHHHHHHhhhccc-c-chHHHHHHHHh---------------HHHHHHHHHHHHhcCCCCcccccccc
Q 027925 155 ------ASQA-WMEWLIKKRKAFDQ-R-GDMAIAAWAEQ---------------QQLELNLRARRLSRSKVSNNFEFSAV 210 (217)
Q Consensus 155 ------~~~~-~~~~~~~~~~~f~~-~-~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~d~~~e~~~~ 210 (217)
...+ +.+.+. .|.. + +|+|..+|++. ...++.+.++++.. +....+.+...
T Consensus 78 ~~~~~~~~g~~~~~~~~----~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~-G~~~~i~~~r~ 152 (369)
T PRK14282 78 PYQETESGGGFFEDIFK----DFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLIN-GAEIPVEYDRY 152 (369)
T ss_pred ccccCCCCCcccccccc----cccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcC-CeEEEEEeeec
Confidence 0011 111010 1111 1 24555555421 01125667888876 88888888887
Q ss_pred cccC
Q 027925 211 EECS 214 (217)
Q Consensus 211 ~~c~ 214 (217)
..|.
T Consensus 153 ~~C~ 156 (369)
T PRK14282 153 ETCP 156 (369)
T ss_pred ccCC
Confidence 7775
No 11
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.2e-21 Score=177.43 Aligned_cols=132 Identities=27% Similarity=0.418 Sum_probs=93.5
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCccc
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA 155 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 155 (217)
.|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||+++.......
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~ 76 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN------KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG 76 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC
Confidence 6999999999999999999999999999999998753 5688999999999999999999999999876432111
Q ss_pred hh--HHHHHHHHHhhhccccchHHHHHHHHh--H------------HHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 156 SQ--AWMEWLIKKRKAFDQRGDMAIAAWAEQ--Q------------QLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 156 ~~--~~~~~~~~~~~~f~~~~~~~~~~~~~~--~------------~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.. +...-+..+...|+.++|+|..+|++. . ...+.+.++++.. +....+.+.....|+
T Consensus 77 ~~~~~~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~-G~~~~i~~~r~~~C~ 150 (365)
T PRK14285 77 GGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYL-GYKNNINITRNMLCE 150 (365)
T ss_pred CCccccCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhC-CeEEEEEeeecccCC
Confidence 00 000000000001223455565665421 0 1125667888776 888888888887775
No 12
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=3.3e-21 Score=175.02 Aligned_cols=129 Identities=28% Similarity=0.413 Sum_probs=94.5
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.++||+|||+|+++||||+++++ ++++++|++|++||+||+||.+|+.||.++......
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~ 76 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN------PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNG 76 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC------hHHHHHHHHHHHHHHHhcchhhhhhhhhcccccccc
Confidence 37999999999999999999999999999999999763 568899999999999999999999999987643211
Q ss_pred c--hhHHHHHHHHHhhhccccchHHHHHHHH---------------hHHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 A--SQAWMEWLIKKRKAFDQRGDMAIAAWAE---------------QQQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. ..+|.+ ....|+.++++|..+|+. .....+.+.++++.. +....+.+.....|+
T Consensus 77 ~~~~~g~~~----~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~-G~~k~i~~~r~~~C~ 148 (373)
T PRK14301 77 NGGFGGFSS----AEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAK-GDEVTLRIPKNVTCD 148 (373)
T ss_pred CCCCCCccc----ccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhC-CceEEEEeeecccCC
Confidence 0 011100 001133344545444431 011226778888887 888888888888775
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.5e-21 Score=177.68 Aligned_cols=130 Identities=25% Similarity=0.405 Sum_probs=93.5
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~ 75 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-------PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANG 75 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccC
Confidence 4799999999999999999999999999999999875 347899999999999999999999999988643211
Q ss_pred c--h--hHHHHHHHHHhhhccccchHHHHHHHHh--------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 A--S--QAWMEWLIKKRKAFDQRGDMAIAAWAEQ--------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~--~--~~~~~~~~~~~~~f~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. + .....+. ...+|+.++|+|..+|++. ....+.+.++++.. +....+.+.....|+
T Consensus 76 ~~~~~~~~~~~~~--~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~-G~~~~i~~~~~~~C~ 150 (380)
T PRK14276 76 GFGGGAGGFGGFD--GSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIF-GKEKEVSYNREATCH 150 (380)
T ss_pred CCCCCCCCCCCcc--ccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcC-CeEEEEEeeccccCC
Confidence 0 0 0000000 0012334456666666421 11125667888777 888888888887775
No 14
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=5.8e-21 Score=173.01 Aligned_cols=129 Identities=29% Similarity=0.435 Sum_probs=92.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~ 76 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD------KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSG 76 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccC
Confidence 47999999999999999999999999999999999753 458899999999999999999999999988643221
Q ss_pred ch-hHHHHHHHHHhhhccccchHHHHHHH-H---------------hHHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 AS-QAWMEWLIKKRKAFDQRGDMAIAAWA-E---------------QQQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~~-~~~~~~~~~~~~~f~~~~~~~~~~~~-~---------------~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.. .+... +...|..++|+|..+|+ + .....+.+.++++.. +-...+.+.....|+
T Consensus 77 ~~~~~~~~----~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~-G~~~~i~~~r~~~C~ 148 (366)
T PRK14294 77 TGFSGFSG----FDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAF-GTEKEIRIQKLETCE 148 (366)
T ss_pred CCCCCcCc----cccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcC-CeEEEEEeeecccCC
Confidence 10 00000 00012223444444443 1 011125677888877 788888887777775
No 15
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=7.4e-21 Score=172.98 Aligned_cols=124 Identities=30% Similarity=0.448 Sum_probs=91.6
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCccc
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA 155 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 155 (217)
.|||+||||+++|+.++||+|||+|+++||||++++ ++++++|++|++||+||+||.+|+.||++|.......
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~ 75 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-------EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG 75 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc-------HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc
Confidence 699999999999999999999999999999999864 4588999999999999999999999999886321110
Q ss_pred --hhHHHHHHHHHhhhccccchHHHHHHHHh---------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 156 --SQAWMEWLIKKRKAFDQRGDMAIAAWAEQ---------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 156 --~~~~~~~~~~~~~~f~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
+.++. .+|++++|+|..+|++. ....+.+.++++.. +....+.+.....|+
T Consensus 76 ~~~~g~~-------~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~-G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 76 GGGGGFG-------GGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECAT-GVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCCCC-------cCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcC-CeEEEEEEEeeccCC
Confidence 00000 01233445555555421 11125667888877 888888888887775
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=9.1e-21 Score=172.30 Aligned_cols=129 Identities=29% Similarity=0.452 Sum_probs=92.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.++||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~ 75 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-------EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQ 75 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhccHhHHHHHHhcCcccccc
Confidence 3799999999999999999999999999999999865 348899999999999999999999999988643321
Q ss_pred c--hhHHHHHHHHHhhhccccchHHHHHHHHh--------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 A--SQAWMEWLIKKRKAFDQRGDMAIAAWAEQ--------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. +.++.. ..+..+| +++|+|..+|+++ ....+.+.++++.. +....+.+.....|+
T Consensus 76 ~~~~~~~~~--~~~~~~~-~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~-G~~~~i~~~r~~~C~ 147 (376)
T PRK14280 76 GFGGGGFGG--GDFGGGF-GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVF-GKEKEIEIPKEETCD 147 (376)
T ss_pred CcCCCCCCC--CCccccc-cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhC-CceeEEEEeeeccCC
Confidence 1 000000 0000011 2345555555311 11235667888877 888888888888775
No 17
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.1e-20 Score=171.97 Aligned_cols=130 Identities=29% Similarity=0.429 Sum_probs=92.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~ 76 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN------KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNG 76 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccc
Confidence 37999999999999999999999999999999998753 468999999999999999999999999988643211
Q ss_pred c-h---hHHHHHHHHHhhhccccchHHHHHHHHh----------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 A-S---QAWMEWLIKKRKAFDQRGDMAIAAWAEQ----------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~-~---~~~~~~~~~~~~~f~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
. + .++.. +. ...+.+++|+|..+|++. ...++.+.++++.. +....+.+.....|+
T Consensus 77 ~~~~~~~~~~~-~~--~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~-G~~~~i~~~r~~~C~ 152 (380)
T PRK14297 77 AGGFGSGGFGG-FD--FSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVF-GVEKEISVTRNENCE 152 (380)
T ss_pred cCCCCCCCCCC-cC--cccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcC-CeEEEEEeeeeccCC
Confidence 0 0 00000 00 000112334454444321 11125567788777 888888888887775
No 18
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=1.4e-20 Score=170.85 Aligned_cols=128 Identities=29% Similarity=0.478 Sum_probs=91.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||+++|+.++||+|||+|+++||||++++. +.++++|++|++||++|+||.+|+.||.++......
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD------KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQ 76 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHHHHHHHHhcchhhhhHhhhcccccccc
Confidence 47999999999999999999999999999999998753 458899999999999999999999999987543221
Q ss_pred ch--hHHHHHHHHHhhhcc-ccchHHHHHHHH-------------hHHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 155 AS--QAWMEWLIKKRKAFD-QRGDMAIAAWAE-------------QQQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 155 ~~--~~~~~~~~~~~~~f~-~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
.. .++..+ .+|. .++++|..+|++ ....++.+.++++.. +....+.+.....|+
T Consensus 77 ~~~~~~~~~~-----~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~-G~~~~v~~~r~~~C~ 146 (371)
T PRK10767 77 GGGGGGFGGG-----GGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVR-GVTKEIRIPTLVTCD 146 (371)
T ss_pred CCCCCCCCCc-----cccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhC-CeeEEEeeeecccCC
Confidence 10 000000 0111 123333333321 011225678888887 888888888888875
No 19
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=1.1e-20 Score=172.50 Aligned_cols=69 Identities=39% Similarity=0.627 Sum_probs=64.3
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
.|||+||||+++|+.++||+|||+|+++||||++++. +.++++|++|++||+||+||.+|+.||+++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD------AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 4899999999999999999999999999999999763 56899999999999999999999999998764
No 20
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.9e-20 Score=169.82 Aligned_cols=69 Identities=41% Similarity=0.658 Sum_probs=64.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
.+|||+||||+++|+.+|||+|||+|+++||||+++++ +.|+++|++|++||+||+||++|+.||++|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD------PAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------hHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 37999999999999999999999999999999998753 5689999999999999999999999999864
No 21
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=2.9e-20 Score=163.41 Aligned_cols=125 Identities=30% Similarity=0.509 Sum_probs=91.1
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCC--Cc
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN--PM 153 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~--~~ 153 (217)
.|||+||||+++|+..|||+||++|+++||||.+.+. .+.++|++|.+||+||+|+++|+.||..+... +.
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~-------~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~~ 115 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK-------EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGEF 115 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccccc
Confidence 4999999999999999999999999999999999873 69999999999999999999999999998754 11
Q ss_pred cchhHHHHHHHHHhhhccccchHHHHHHHHhHHHHHHHHHHHHhcCCCCcccccccccccCC
Q 027925 154 KASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKVSNNFEFSAVEECSR 215 (217)
Q Consensus 154 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~~ 215 (217)
.+ ...+.+.. .|++ .+....+...++-.+.+.+.+..+ +....++.+..+.|..
T Consensus 116 ~g--~~~~~~~~---~~~~--~~~~~~~~~~~~~d~~~~f~~A~~-g~~~~~~~~~~~~~~t 169 (288)
T KOG0715|consen 116 GG--NPFDVFLE---FFGG--KMNKRVPDKDQYYDLSLDFKEAVR-GSKKRISFNVLSDCET 169 (288)
T ss_pred cC--CccchHHH---hhcc--cccccccCcccccccccCHHHHhh-ccccceEEEeeccccc
Confidence 11 00111111 1222 011111111233336677777777 6688899888888864
No 22
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=1.7e-20 Score=171.53 Aligned_cols=132 Identities=25% Similarity=0.442 Sum_probs=93.1
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc--
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM-- 153 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~-- 153 (217)
.|||+||||+++|+.++||+|||+|+++||||++++. ..++++|++|++||+||+||.+|+.||+++.....
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~ 76 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN------KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSS 76 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccc
Confidence 6999999999999999999999999999999999763 45889999999999999999999999998753211
Q ss_pred ----c------chhHHHHHHHHHhhhccccchH-------HHHHHHH--------------hHHHHHHHHHHHHhcCCCC
Q 027925 154 ----K------ASQAWMEWLIKKRKAFDQRGDM-------AIAAWAE--------------QQQLELNLRARRLSRSKVS 202 (217)
Q Consensus 154 ----~------~~~~~~~~~~~~~~~f~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~l~~~~~d 202 (217)
. ...+|.++|..+...|++.+.+ +...+++ .....+.+.++++.. +..
T Consensus 77 ~~~~~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~-G~~ 155 (397)
T PRK14281 77 AASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAK-GVE 155 (397)
T ss_pred cccCCCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhC-CeE
Confidence 0 0112445554333344321100 0000000 111225678888887 888
Q ss_pred cccccccccccC
Q 027925 203 NNFEFSAVEECS 214 (217)
Q Consensus 203 ~~~e~~~~~~c~ 214 (217)
..+.+.....|.
T Consensus 156 ~~i~~~r~~~C~ 167 (397)
T PRK14281 156 KTLKIKKQVPCK 167 (397)
T ss_pred EEEEEEeeecCC
Confidence 888888887775
No 23
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2.3e-19 Score=150.74 Aligned_cols=103 Identities=33% Similarity=0.527 Sum_probs=81.4
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (217)
...|+|+||||.++|+..+|++||++|++++|||+++. +...++.++|+.|+.||.||+|.++|+.||+.|..+..
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~e----ed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~ 87 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHE----EDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDE 87 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchh----hhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCc
Confidence 35699999999999999999999999999999999963 23578999999999999999999999999999987743
Q ss_pred cchhHHHHHHHHHhhhccccchHHHHHH
Q 027925 154 KASQAWMEWLIKKRKAFDQRGDMAIAAW 181 (217)
Q Consensus 154 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 181 (217)
.+ ....+|..-|+..|.......+..|
T Consensus 88 ~~-d~~~~~~e~~~~iyk~VteedIeef 114 (264)
T KOG0719|consen 88 SG-DIDEDWLEFWRAIYKKVTEEDIEEF 114 (264)
T ss_pred cc-hhhhHHHHHHHHHHhhcccccHHHH
Confidence 32 2234444444455655544444444
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=7.2e-20 Score=165.82 Aligned_cols=70 Identities=47% Similarity=0.749 Sum_probs=64.8
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
.|||+||||+++|+.+|||+|||+|+++||||+++.. .+.|+++|++|++||+||+||.+|+.||.+|..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN-----KAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 6999999999999999999999999999999998753 246899999999999999999999999998864
No 25
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=3.5e-19 Score=161.63 Aligned_cols=72 Identities=46% Similarity=0.668 Sum_probs=66.7
Q ss_pred CCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
...+.||+||||.++|+..+||++||+||++||||+++.. .++++++|+.|+.||+|||||..|++||.+..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-----ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-----IEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-----HHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 3457899999999999999999999999999999998875 57899999999999999999999999998743
No 26
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=2.3e-19 Score=163.24 Aligned_cols=69 Identities=46% Similarity=0.785 Sum_probs=64.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||++|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~ 72 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-------EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA 72 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence 5799999999999999999999999999999999864 34899999999999999999999999998754
No 27
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=2.7e-19 Score=163.15 Aligned_cols=70 Identities=51% Similarity=0.787 Sum_probs=64.8
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..|||+||||+++|+.+|||+|||+|+++||||++++. +.++++|++|++||+||+||.+|+.||.+|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 73 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD------KEAEQKFKEINEAYEILSDPQKRAQYDQFGHA 73 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence 47999999999999999999999999999999999753 45889999999999999999999999998753
No 28
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.78 E-value=4.9e-20 Score=166.17 Aligned_cols=127 Identities=34% Similarity=0.462 Sum_probs=89.7
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCccc-
Q 027925 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA- 155 (217)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~- 155 (217)
|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||.++.......
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~ 73 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-------KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG 73 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccC
Confidence 79999999999999999999999999999999863 3478999999999999999999999999876432211
Q ss_pred ---hhHHHHHHHHHhhhccccchHHHHHHHHh----------------HHHHHHHHHHHHhcCCCCcccccccccccC
Q 027925 156 ---SQAWMEWLIKKRKAFDQRGDMAIAAWAEQ----------------QQLELNLRARRLSRSKVSNNFEFSAVEECS 214 (217)
Q Consensus 156 ---~~~~~~~~~~~~~~f~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~d~~~e~~~~~~c~ 214 (217)
...+.. +. ...|+.+.+++..+|++. ...++.+.++++.. +-...+.+.....|+
T Consensus 74 ~~~~~~~~~-~~--~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~-G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 74 GGGGGGFNG-FD--IGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVF-GVEKEIEIPRKESCE 147 (354)
T ss_pred cCCCCCcCC-cc--ccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhC-CeeEEEEeecCCcCC
Confidence 000000 00 001333445555555421 11124567777776 777778777777775
No 29
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.77 E-value=3.9e-19 Score=122.21 Aligned_cols=64 Identities=58% Similarity=0.926 Sum_probs=60.0
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhh
Q 027925 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD 145 (217)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 145 (217)
|||+||||+++++.++||++|+++++++|||+++.. ...+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~-----~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGD-----EAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTST-----HHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhh-----hhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 589999999999999999999999999999998774 1468899999999999999999999998
No 30
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=4.1e-19 Score=156.42 Aligned_cols=69 Identities=41% Similarity=0.660 Sum_probs=64.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-------PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 3799999999999999999999999999999999864 35889999999999999999999999998764
No 31
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=4.6e-19 Score=161.44 Aligned_cols=69 Identities=46% Similarity=0.727 Sum_probs=64.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..|||+||||+++|+.++||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~ 70 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-------PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA 70 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence 3799999999999999999999999999999999875 34789999999999999999999999998764
No 32
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=7.3e-19 Score=154.26 Aligned_cols=75 Identities=37% Similarity=0.581 Sum_probs=69.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCcc
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (217)
..|||+||||.++++..+|++|||.++++||||+|+++ +.|.++|+.|.+||+||+|+.+|+.||..+......
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~d------P~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGD------PQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 57999999999999999999999999999999999996 669999999999999999999999999998755544
Q ss_pred c
Q 027925 155 A 155 (217)
Q Consensus 155 ~ 155 (217)
.
T Consensus 78 ~ 78 (296)
T KOG0691|consen 78 Q 78 (296)
T ss_pred h
Confidence 3
No 33
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5.7e-19 Score=161.18 Aligned_cols=133 Identities=27% Similarity=0.404 Sum_probs=91.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhc----cCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM----DNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~----~~~~ 150 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++.. +.++++|++|++||+||+||.+|+.||+ +|..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD------AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 37999999999999999999999999999999998753 4589999999999999999999999998 6643
Q ss_pred CCcc----c-hhHH----HHHHHHHh--h---hc-cccchHHHHHHHHh-----------HHHHHHHHHHHHhcCCCCcc
Q 027925 151 NPMK----A-SQAW----MEWLIKKR--K---AF-DQRGDMAIAAWAEQ-----------QQLELNLRARRLSRSKVSNN 204 (217)
Q Consensus 151 ~~~~----~-~~~~----~~~~~~~~--~---~f-~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~d~~ 204 (217)
.... . +.++ .+.|.... . +| +.+.++|..+|+++ ...++.+.++++.. +...+
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~-G~~k~ 160 (389)
T PRK14295 82 GFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAID-GATVP 160 (389)
T ss_pred ccccCCCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhC-CceEE
Confidence 2210 0 0000 01110000 0 00 01223343334321 11125678888887 88888
Q ss_pred cccccccccC
Q 027925 205 FEFSAVEECS 214 (217)
Q Consensus 205 ~e~~~~~~c~ 214 (217)
+.+.....|.
T Consensus 161 i~~~r~~~C~ 170 (389)
T PRK14295 161 LRLTSQAPCP 170 (389)
T ss_pred EEeeccccCC
Confidence 8888877775
No 34
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=3.9e-19 Score=161.33 Aligned_cols=68 Identities=41% Similarity=0.617 Sum_probs=63.6
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
.|||+||||+++|+.++||+|||+|+++||||+++. ..++++|++|++||+||+||.+|+.||.+|..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~-------~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-------KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence 589999999999999999999999999999999864 35889999999999999999999999998864
No 35
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=5e-19 Score=151.57 Aligned_cols=69 Identities=38% Similarity=0.590 Sum_probs=65.5
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
..++|+||||+++|+.++||++||+|+++||||++++. +++.++|++||+||+||+||.+|..||.+|.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~------P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~ 98 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN------PEATDKFKEINTAYAILSDPTKRNVYDEYGE 98 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC------chhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence 57899999999999999999999999999999999884 6799999999999999999999999999965
No 36
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=4.3e-19 Score=161.26 Aligned_cols=68 Identities=47% Similarity=0.727 Sum_probs=63.3
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
.|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-------PGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------cCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 699999999999999999999999999999999865 34789999999999999999999999998764
No 37
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=3.8e-18 Score=155.64 Aligned_cols=70 Identities=37% Similarity=0.614 Sum_probs=65.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..|||+||||+++|+.+|||+|||+|+++||||+++++ ++++++|++|++||+||+||.+|+.||.++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD------KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 47999999999999999999999999999999999763 56899999999999999999999999998753
No 38
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=3e-18 Score=155.73 Aligned_cols=77 Identities=42% Similarity=0.652 Sum_probs=70.1
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (217)
++.+||.+|+|+++|+.+|||+|||++++.|||||+.+. .+++.|++.|+.|..|||||+||.+|++||.+|..+..
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dp---d~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDP---DQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCCh---hHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 456999999999999999999999999999999999753 35788999999999999999999999999999876654
No 39
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=4.1e-18 Score=154.73 Aligned_cols=68 Identities=41% Similarity=0.654 Sum_probs=63.1
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
.|||+||||+++|+.+|||+|||+|+++||||+++. ..++++|++|++||+||+||.+|+.||.+|..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 70 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-------KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD 70 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence 699999999999999999999999999999999864 34788999999999999999999999998753
No 40
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.72 E-value=7.6e-18 Score=149.34 Aligned_cols=66 Identities=44% Similarity=0.670 Sum_probs=62.1
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (217)
.|||+||||+++++.++||+|||+|+++||||+++. ..++++|++|++||++|+||.+|+.||.++
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-------~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g 69 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-------PDAEARFKEVAEAWEVLSDEQRRAEYDQLW 69 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Confidence 699999999999999999999999999999999754 358999999999999999999999999875
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.72 E-value=1.8e-17 Score=161.74 Aligned_cols=73 Identities=27% Similarity=0.379 Sum_probs=66.5
Q ss_pred CCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCC
Q 027925 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (217)
....+||+||||+++|+..+||+|||+||++||||+++++ .+.++|+.|++||+||+||.+|+.||.+|..+.
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-------~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl 642 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-------EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI 642 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHHHHhCCHHHHHHHhhcccccc
Confidence 4568999999999999999999999999999999999752 478899999999999999999999999987543
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.68 E-value=8.2e-17 Score=108.91 Aligned_cols=59 Identities=51% Similarity=0.720 Sum_probs=54.2
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChh
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (217)
.+||+||||+++++.++||++|+++++++|||++++. .+.+.+.|.+|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-----~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999998752 3568999999999999999985
No 43
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.66 E-value=2.7e-16 Score=104.45 Aligned_cols=55 Identities=47% Similarity=0.695 Sum_probs=51.2
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCC
Q 027925 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (217)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsd 137 (217)
|||+||||+++++.++||++|++|++++|||+++.. +.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~------~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999998752 5689999999999999986
No 44
>PHA03102 Small T antigen; Reviewed
Probab=99.65 E-value=2.1e-16 Score=126.72 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=63.2
Q ss_pred CCCcchhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCC
Q 027925 75 EKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (217)
Q Consensus 75 ~~d~Y~iLgv~~~a--s~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (217)
...+|+||||+++| +..+||+|||++++++|||++++ .++|++|++||++|+|+.+|..||.++....
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----------EEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----------hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 35789999999999 99999999999999999999643 4799999999999999999999999987554
Q ss_pred ccc
Q 027925 153 MKA 155 (217)
Q Consensus 153 ~~~ 155 (217)
...
T Consensus 74 ~~~ 76 (153)
T PHA03102 74 SEE 76 (153)
T ss_pred ccc
Confidence 443
No 45
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.9e-16 Score=130.87 Aligned_cols=75 Identities=36% Similarity=0.532 Sum_probs=68.0
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (217)
...|+|+||||+++++.+|||+|||+|+++|||||++.. ...++.|..|++||+.|+|+..|..|..+|..+..
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~------~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp 170 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE------EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP 170 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc------chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence 457999999999999999999999999999999999773 45788999999999999999999999999986654
Q ss_pred c
Q 027925 154 K 154 (217)
Q Consensus 154 ~ 154 (217)
.
T Consensus 171 q 171 (230)
T KOG0721|consen 171 Q 171 (230)
T ss_pred c
Confidence 4
No 46
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.62 E-value=1.2e-15 Score=124.38 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=60.8
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
.|||+||||++. ++..+|+++|++|++++|||++... .+...+.+.+..||+||+||+||.+|+.|+....
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~---~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTL---QEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999996 7899999999999999999998642 1233455678999999999999999999987653
No 47
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=9.3e-16 Score=126.14 Aligned_cols=68 Identities=49% Similarity=0.664 Sum_probs=63.6
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccc-HHHHHHHHHHHHHHHcCChhHHHhhhcc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGE-TAEAKFIKIQAAYELLIDEERRRQYDMD 147 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~-~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (217)
...+||+||||+++|+..+|+++||+++++||||+++.. . .+.+.|+.|++||++|+|+.+|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD------PKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 457999999999999999999999999999999999875 2 4899999999999999999999999985
No 48
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.61 E-value=4e-15 Score=121.75 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=62.4
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
.|||+||||++. ++..+|+++|++|++++|||++.+.+ +.+...+.+.+..||+||+||+||.+|+.|+....
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~-~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANAS-ERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999995 78899999999999999999987642 22344578899999999999999999999986543
No 49
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.61 E-value=1.7e-15 Score=145.29 Aligned_cols=69 Identities=39% Similarity=0.638 Sum_probs=63.7
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (217)
.|||+||||+++|+.++||++||+|+++||||+++. ..+.++|++|++||++|+||.+|+.||.++...
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-------~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-------PDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999865 347889999999999999999999999987644
No 50
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.60 E-value=1.1e-14 Score=119.62 Aligned_cols=73 Identities=23% Similarity=0.357 Sum_probs=62.0
Q ss_pred CCCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccC
Q 027925 75 EKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (217)
Q Consensus 75 ~~d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (217)
..|||+||||++. ++..+|+++|++|++++|||++...+ ..++..+.+.+..||+||++|+||.+|+.|+...
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~-~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l 79 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAG-DAEKRVAMQWATRANEAYQTLRDPLKRARYLLHL 79 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHh
Confidence 4799999999995 68999999999999999999987642 2233446677899999999999999999999643
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.56 E-value=8.8e-15 Score=119.89 Aligned_cols=75 Identities=23% Similarity=0.360 Sum_probs=64.3
Q ss_pred CCCCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
...|||++|||++. .+..+|+++||+|++++|||++.+.. ..++..+.+.+..||+||+||+||.+|+.|+....
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~-~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAP-EREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 35899999999996 67899999999999999999987642 22345578899999999999999999999996543
No 52
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.55 E-value=4.1e-15 Score=132.14 Aligned_cols=76 Identities=39% Similarity=0.652 Sum_probs=68.6
Q ss_pred CCCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
....+|||+||||.++|+..||.+|||+|+.+||||...+. +++..|+.+|..|..|-+||+||++|+.||.+-++
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdE---eEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP 465 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDE---EEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP 465 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCH---HHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence 35679999999999999999999999999999999998763 34667999999999999999999999999998653
No 53
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=1.5e-14 Score=130.71 Aligned_cols=92 Identities=32% Similarity=0.467 Sum_probs=77.0
Q ss_pred CCCCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCC
Q 027925 71 NWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (217)
Q Consensus 71 ~~~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (217)
..+.-+|||.||||..+++..+||++||++++.||||++.+. +.+++.+|++|.+||.+|+||.+|..||..-+.
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-----q~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-----QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-----hHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 345678999999999999999999999999999999999874 578999999999999999999999999998766
Q ss_pred CCccchhHHHHHHHHHh
Q 027925 151 NPMKASQAWMEWLIKKR 167 (217)
Q Consensus 151 ~~~~~~~~~~~~~~~~~ 167 (217)
.+++.+.+..+.+..++
T Consensus 443 e~~~~~~a~~dp~~~~~ 459 (486)
T KOG0550|consen 443 EEVGSGGAGFDPFNIFR 459 (486)
T ss_pred hhhcCCCcCcChhhhhh
Confidence 66554434344444433
No 54
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=7.7e-14 Score=127.06 Aligned_cols=69 Identities=32% Similarity=0.540 Sum_probs=65.0
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
+..|+|.+|||+.+++.++||+.||++|...|||||.. +.|++.|+.|+.||++|+|+++|..||....
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~-------~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI-------PRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC-------hhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 37899999999999999999999999999999999975 5699999999999999999999999999764
No 55
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.42 E-value=1.7e-13 Score=119.51 Aligned_cols=65 Identities=37% Similarity=0.507 Sum_probs=57.2
Q ss_pred CCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHcCC
Q 027925 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTL-EKGETAEAKFIKIQAAYELLID 137 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~-~~~~~a~~~f~~I~~AY~vLsd 137 (217)
....++|+||||++++|.++||++||+|+++||||++.+.|.+ +..+.++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999998776543 3356799999999999999974
No 56
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=1.6e-13 Score=117.03 Aligned_cols=71 Identities=37% Similarity=0.615 Sum_probs=65.1
Q ss_pred CCCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
.....|.|+||||.++++..+|.+|||+|+++||||++.+. ++.+.|+.|..||++|.|.+.|..||-..+
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~-------e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP-------ESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc-------hhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 35668999999999999999999999999999999999874 456999999999999999999999998764
No 57
>PHA02624 large T antigen; Provisional
Probab=99.38 E-value=8.7e-13 Score=125.17 Aligned_cols=83 Identities=23% Similarity=0.378 Sum_probs=67.0
Q ss_pred CCCCcchhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhh--hccC-
Q 027925 74 DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY--DMDN- 148 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~a--s~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y--D~~~- 148 (217)
+..++|+||||+++| +.++||+|||+++++||||+.+ ++++|++|++||++|+|+.+|..| |...
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG----------deekfk~Ln~AYevL~d~~k~~r~~fd~~~~ 78 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG----------DEEKMKRLNSLYKKLQEGVKSARQSFGTQDS 78 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC----------cHHHHHHHHHHHHHHhcHHHhhhcccccccc
Confidence 357899999999999 9999999999999999999953 257999999999999999999999 5431
Q ss_pred CCCCccchhHHHHHHHHH
Q 027925 149 RVNPMKASQAWMEWLIKK 166 (217)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~ 166 (217)
..-+..+...|.+|+..+
T Consensus 79 ~~v~~~~~~~w~~ww~~f 96 (647)
T PHA02624 79 SEIPTYGTPEWEQWWEEF 96 (647)
T ss_pred cCCCCCccccHHHHHHHh
Confidence 111233555677777644
No 58
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=4.1e-13 Score=115.43 Aligned_cols=70 Identities=47% Similarity=0.673 Sum_probs=63.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
..|||+||||.++|+..+|++||++++++||||+++.. ...++.+|++|.+||++|+|+.+|..||+++.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-----~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-----KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-----hhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 36899999999999999999999999999999997652 23466699999999999999999999999986
No 59
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=1.5e-12 Score=106.80 Aligned_cols=73 Identities=22% Similarity=0.319 Sum_probs=63.8
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
.|||++|||++. .+...|+++|+.|.+++|||+....+ +.++..+.+....||+||.||+||.+|+.|=....
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~-~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSS-AQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCC-HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 589999999995 89999999999999999999998763 34456678899999999999999999999976543
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.36 E-value=1e-12 Score=100.68 Aligned_cols=53 Identities=26% Similarity=0.368 Sum_probs=47.5
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcC
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI 136 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLs 136 (217)
...++|+||||+++++.++||++||+|++++|||+.+ ..+.|++|++||++|.
T Consensus 63 s~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG----------s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 63 SKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG----------STYIASKVNEAKDLLL 115 (116)
T ss_pred CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC----------CHHHHHHHHHHHHHHh
Confidence 3479999999999999999999999999999999853 2478899999999995
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.29 E-value=3e-12 Score=116.64 Aligned_cols=79 Identities=33% Similarity=0.448 Sum_probs=71.4
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCCCCCc
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (217)
..-|+|+||||..+++..+||++||+|+.++||||.+. -.++++.+-++.++.|++||+.|+|...|+.|-.+|.++..
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~-mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP-MVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCC-CChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 35799999999999999999999999999999999887 35556788999999999999999999999999999876543
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.18 E-value=5e-11 Score=96.36 Aligned_cols=62 Identities=23% Similarity=0.409 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 87 DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 87 ~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
..+..+|+++|++|++++|||++...+ ..++..+.+.+..||+||+||+||.+|+.|+....
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~-~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGS-AQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCC-hhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357899999999999999999986643 22345578899999999999999999999998754
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=4.4e-10 Score=93.04 Aligned_cols=64 Identities=31% Similarity=0.607 Sum_probs=58.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHh
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQ 143 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~ 143 (217)
.-|+|+||.|.|..+.++||+.||+|++..|||+|+++ .+.|...|-.|.+||.+|-|+..|..
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd-----~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD-----AERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc-----HHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 46999999999999999999999999999999999986 47799999999999999999985543
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.2e-09 Score=94.23 Aligned_cols=71 Identities=32% Similarity=0.387 Sum_probs=62.3
Q ss_pred CCCCcchhccCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccC
Q 027925 74 DEKSPYETLELER---DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (217)
Q Consensus 74 ~~~d~Y~iLgv~~---~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (217)
...|+|.+|||+. .++..+|.++.++.+.+||||+....| .....+.|+.|+.||+||+|+.+|..||.-.
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g----~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGG----NKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccC----CCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 3489999999986 788999999999999999999985543 2446899999999999999999999999864
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=2.1e-07 Score=92.49 Aligned_cols=63 Identities=25% Similarity=0.371 Sum_probs=51.8
Q ss_pred HhhhcCCCCCCCcchhccCCC----CCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCC
Q 027925 66 VVSAANWADEKSPYETLELER----DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (217)
Q Consensus 66 ~~~~~~~~~~~d~Y~iLgv~~----~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsd 137 (217)
....+......+.|+||.|+- ....++||++|++|+.+||||||+. ..++|..+++||+.|+.
T Consensus 1271 lekKP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---------GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1271 LEKKPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---------GREMFERVNKAYELLSS 1337 (2235)
T ss_pred HhcCCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---------HHHHHHHHHHHHHHHHH
Confidence 334444456678999999985 3455899999999999999999965 67999999999999983
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=3.3e-07 Score=77.85 Aligned_cols=58 Identities=31% Similarity=0.528 Sum_probs=50.7
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHH-HcCCh
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE-LLIDE 138 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~-vLsdp 138 (217)
.-..+|.||||..+++.++++.+|..|++++|||...+ +...+.|.+|.+||. ||+..
T Consensus 45 ~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-------~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 45 KIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-------EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-------cccHHHHHHHHHHHHHHHHHH
Confidence 44689999999999999999999999999999998755 346789999999998 77643
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=1.8e-06 Score=64.87 Aligned_cols=54 Identities=28% Similarity=0.263 Sum_probs=47.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCCh
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp 138 (217)
....-.||||.++++.+.||.++|++....|||+.+.+ -.-.+||||+++|...
T Consensus 55 r~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP----------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 55 RREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP----------YLASKINEAKDLLEGT 108 (112)
T ss_pred hHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH----------HHHHHHHHHHHHHhcc
Confidence 45667899999999999999999999999999998763 6777899999999754
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=3.2e-05 Score=61.95 Aligned_cols=74 Identities=20% Similarity=0.306 Sum_probs=59.3
Q ss_pred CCCCCcchhccCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhcc
Q 027925 73 ADEKSPYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD 147 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~--~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (217)
....+||.++|... ..++..++.-|....+++|||+..... ......|.+...+|++||.+|.||-+|+.|=..
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~-~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSF-AGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccc-cccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45678999998654 567777888999999999999955431 112346889999999999999999999999754
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=7.9e-05 Score=61.07 Aligned_cols=63 Identities=35% Similarity=0.463 Sum_probs=54.7
Q ss_pred CCCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccc-ccHHHHHHHHHHHHHHHc
Q 027925 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEK-GETAEAKFIKIQAAYELL 135 (217)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~-~~~a~~~f~~I~~AY~vL 135 (217)
....+.|.+||+...++..+|+++|+++...+|||+....|.+.+ -..+.+++++|++||+.+
T Consensus 110 ~~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 110 LDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred ccchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 344799999999999999999999999999999999887765443 467899999999999864
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=97.02 E-value=0.00067 Score=63.52 Aligned_cols=53 Identities=28% Similarity=0.367 Sum_probs=41.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHcC
Q 027925 84 LERDADEEQIKVAYRRLAKFYHPDVYDGRGTL-EKGETAEAKFIKIQAAYELLI 136 (217)
Q Consensus 84 v~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~-~~~~~a~~~f~~I~~AY~vLs 136 (217)
|..-.+.++||++||+.++..||||.+..|.. ..+-.+++.|-.+++|+..-.
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 33456899999999999999999999988633 335677888888888876543
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.98 E-value=0.00047 Score=56.48 Aligned_cols=72 Identities=25% Similarity=0.410 Sum_probs=55.3
Q ss_pred CcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccCC
Q 027925 77 SPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (217)
Q Consensus 77 d~Y~iLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (217)
+++.++|+++. ...+.++..|+.+.+.+|||+....+.. ....+.+.+..++.||.+|.||-+|+.|=....
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~-~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEA-EQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchH-HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 35556666653 3567799999999999999998775321 223466789999999999999999999976543
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=95.30 E-value=0.04 Score=43.10 Aligned_cols=57 Identities=21% Similarity=0.179 Sum_probs=42.1
Q ss_pred CCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhH
Q 027925 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEER 140 (217)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~ 140 (217)
.......||||++..+.++|.+.|.+|-...+|++.+. --.-.+|..|.+.|..+.+
T Consensus 56 tl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----------fYLQSKV~rAKErl~~El~ 112 (127)
T PF03656_consen 56 TLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----------FYLQSKVFRAKERLEQELK 112 (127)
T ss_dssp -HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----------HHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----------HHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999997643 4666789999998875543
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=87.15 E-value=1.3 Score=33.89 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChh
Q 027925 87 DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (217)
Q Consensus 87 ~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (217)
..+..+++.+.|.+-++.|||..... |+++...++-++.++.-.+.|..+.
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~--P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQH--PEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccC--hHHHHhhHHHHHHHHHHHHHHhccC
Confidence 45678899999999999999987763 3455667777888888888887654
No 74
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=86.32 E-value=1.7 Score=36.32 Aligned_cols=40 Identities=38% Similarity=0.449 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCCh
Q 027925 85 ERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (217)
Q Consensus 85 ~~~as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp 138 (217)
+++|+.+||++|+.++..+|--| ++.-..|..||+.|.=.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd--------------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD--------------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHHHH
Confidence 47899999999999999999333 46677799999876533
No 75
>PF13446 RPT: A repeated domain in UCH-protein
Probab=86.16 E-value=1.4 Score=29.54 Aligned_cols=28 Identities=25% Similarity=0.489 Sum_probs=25.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHH
Q 027925 75 EKSPYETLELERDADEEQIKVAYRRLAK 102 (217)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~l~~ 102 (217)
..+.|++|||+++.+.+.|-.+|.....
T Consensus 4 ~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 4 VEEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999887
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.71 E-value=1.4 Score=39.48 Aligned_cols=59 Identities=32% Similarity=0.389 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhccC
Q 027925 88 ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (217)
Q Consensus 88 as~~eIK~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (217)
++..+|..+|+..++.+||++.... .......++.+++|.+||.||.+...|..+|...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFY--EKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHH--HHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 5678899999999999999987410 0001246788999999999999977777777664
No 77
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=50.54 E-value=11 Score=17.92 Aligned_cols=13 Identities=54% Similarity=0.754 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHcC
Q 027925 124 KFIKIQAAYELLI 136 (217)
Q Consensus 124 ~f~~I~~AY~vLs 136 (217)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4677888888774
No 78
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=42.33 E-value=1e+02 Score=21.98 Aligned_cols=35 Identities=9% Similarity=0.079 Sum_probs=28.1
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~ 110 (217)
.|--+++|+.|.++..||+.+-++.+++..--..+
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 45567889999999999999998888887544443
No 79
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.23 E-value=72 Score=24.91 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=31.0
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 027925 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDG 111 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~~ 111 (217)
...-.||+|.+..+.++|.+.|..|-....+.+.+.
T Consensus 59 qEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 59 QEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred HHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 456789999999999999999999999887776543
No 80
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=35.54 E-value=1.1e+02 Score=19.56 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhc
Q 027925 94 KVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (217)
Q Consensus 94 K~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (217)
...++...+.-||+.. ..+..+.|.+.|..|++.++...+|.
T Consensus 12 ~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----------VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-----------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4456667778888843 46788999999999998766554444
No 81
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=33.81 E-value=1.1e+02 Score=20.73 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhc
Q 027925 95 VAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (217)
Q Consensus 95 ~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (217)
+..+...+.-||+.. ..+..+.|.+.+..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~-----------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE-----------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445666777889853 35788899999999998887665554
No 82
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=29.21 E-value=1.5e+02 Score=18.98 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhc
Q 027925 97 YRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (217)
Q Consensus 97 Yr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (217)
.+...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 15 ~r~~~~~~~p~~~-----------~~~i~~~~~~~W~~ls~~eK~~y~~~ 53 (66)
T cd01390 15 QRPKLKKENPDAS-----------VTEVTKILGEKWKELSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHCcCCC-----------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4555667788843 46889999999999997765554444
No 83
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=27.34 E-value=73 Score=18.14 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHhCC
Q 027925 90 EEQIKVAYRRLAKFYHP 106 (217)
Q Consensus 90 ~~eIK~aYr~l~~~~HP 106 (217)
.++.+.+.|+.++.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 36788899999999993
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=26.72 E-value=2.4e+02 Score=20.10 Aligned_cols=34 Identities=15% Similarity=0.017 Sum_probs=26.6
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 027925 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110 (217)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~l~~~~HPDk~~ 110 (217)
|--.+.|+.|.++.+||..|-.+.++|..=-..+
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~P 37 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKP 37 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCc
Confidence 3445678899999999999999999988544443
No 85
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=26.43 E-value=1.6e+02 Score=20.00 Aligned_cols=42 Identities=10% Similarity=-0.023 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHHHHHcCChhHHHhhhc
Q 027925 94 KVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (217)
Q Consensus 94 K~aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (217)
.+.++..++.-||+.. ..+..+.|.+.+..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~~-----------~~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGLT-----------NNEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCCC-----------HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4556778888899863 45788899999999997766554444
No 86
>COG2879 Uncharacterized small protein [Function unknown]
Probab=22.28 E-value=2e+02 Score=19.80 Aligned_cols=28 Identities=29% Similarity=0.208 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccHHHHHHHHHHHH
Q 027925 96 AYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131 (217)
Q Consensus 96 aYr~l~~~~HPDk~~~~g~~~~~~~a~~~f~~I~~A 131 (217)
.|-.-.++.|||+.+-. -++-|++-.+|
T Consensus 27 nYVehmr~~hPd~p~mT--------~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPMT--------YEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCccc--------HHHHHHHHHHh
Confidence 57778899999997542 45566655543
No 87
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=20.02 E-value=30 Score=23.54 Aligned_cols=29 Identities=28% Similarity=0.415 Sum_probs=20.8
Q ss_pred CCcchhccCCCCCCHHHH-HHHHHHHHHHhCCCC
Q 027925 76 KSPYETLELERDADEEQI-KVAYRRLAKFYHPDV 108 (217)
Q Consensus 76 ~d~Y~iLgv~~~as~~eI-K~aYr~l~~~~HPDk 108 (217)
.+++++||+++ +++ ......+....|||-
T Consensus 6 ~~~~~i~G~~~----~~~~~~~~~~~~~~ihpdD 35 (91)
T PF08447_consen 6 DNFYEIFGYSP----EEIGKPDFEEWLERIHPDD 35 (91)
T ss_dssp THHHHHHTS-H----HHHTCBEHHHHHHHB-TTT
T ss_pred HHHHHHhCCCH----HHhccCCHHHHHhhcCHHH
Confidence 57899999955 566 556777888999994
Done!