Query 027932
Match_columns 217
No_of_seqs 24 out of 26
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 05:14:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027932.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027932hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v54i_ f.23.3.1 (I:) Mitochon 22.3 20 0.0015 24.6 2.0 23 21-48 42-64 (73)
2 d1k8ua_ a.39.1.2 (A:) Calcycli 15.9 45 0.0033 21.7 2.5 31 62-92 29-59 (89)
3 d1lu4a_ c.47.1.10 (A:) Soluble 13.1 78 0.0057 20.4 3.2 43 80-125 65-108 (134)
4 d1p16a2 d.142.2.3 (A:1-245) mR 12.6 37 0.0027 24.2 1.5 26 85-110 25-53 (245)
5 d1ksoa_ a.39.1.2 (A:) Calcycli 12.1 70 0.0051 20.9 2.7 31 62-92 29-61 (93)
6 d2gkea2 d.21.1.1 (A:131-274) D 12.0 15 0.0011 26.7 -1.0 33 93-125 108-140 (144)
7 d1y2oa1 a.238.1.3 (A:1-248) BA 9.4 66 0.0048 23.1 1.9 52 62-113 24-82 (248)
8 d1kona_ e.39.1.1 (A:) Hypothet 8.9 43 0.0031 25.6 0.7 92 21-131 45-140 (244)
9 d1tfua_ c.26.1.3 (A:) Phosphop 8.6 1.3E+02 0.0096 18.7 3.0 29 61-91 125-154 (157)
10 d1e8aa_ a.39.1.2 (A:) Calcycli 8.2 1.3E+02 0.0095 19.4 2.9 31 62-92 28-60 (87)
No 1
>d1v54i_ f.23.3.1 (I:) Mitochondrial cytochrome c oxidase subunit VIc {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.29 E-value=20 Score=24.63 Aligned_cols=23 Identities=35% Similarity=0.564 Sum_probs=18.9
Q ss_pred hhhHHHHHHhhhhhhhHHHHhHHHhhhc
Q 027932 21 TKKAAAAEACKSFDDSKEEINKEFEEKK 48 (217)
Q Consensus 21 ~KKAAAAEa~KsFdeSKE~i~kEfeeKK 48 (217)
++|.|=|++.|++| .+|+||+-+
T Consensus 42 prKkaYadFYknYD-----a~KdFe~Mr 64 (73)
T d1v54i_ 42 KRKKAYADFYRNYD-----SMKDFEEMR 64 (73)
T ss_dssp HHHHHHHHHHHTCC-----HHHHHHHHH
T ss_pred HhHHHHHHHHHccc-----hhhhHHHHH
Confidence 67888999999999 677887754
No 2
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}
Probab=15.87 E-value=45 Score=21.73 Aligned_cols=31 Identities=29% Similarity=0.484 Sum_probs=18.1
Q ss_pred chHhHHHhhccccccccccchHHHHHHHHHH
Q 027932 62 SSAEIKTLVKDRKEDGLKKHSTAVHKLLEEL 92 (217)
Q Consensus 62 s~aeiK~LvKe~k~~glKKns~aV~KfleEL 92 (217)
+..|++.|++..-..|.+++...|.+++.+|
T Consensus 29 s~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~l 59 (89)
T d1k8ua_ 29 SKKELKELIQKELTIGSKLQDAEIARLMEDL 59 (89)
T ss_dssp EHHHHHHHHHHHSCCGGGTTSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhccCCHHHHHHHHHHh
Confidence 3456666666544445556666666666665
No 3
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.11 E-value=78 Score=20.40 Aligned_cols=43 Identities=9% Similarity=0.295 Sum_probs=29.5
Q ss_pred cchHHHHHHHHHHHhhcCCCchhh-hhhhhhcCCccCCCceeEEeec
Q 027932 80 KHSTAVHKLLEELVKIEFPGSKAV-SEASSKFGAASVPGPVFFIFEK 125 (217)
Q Consensus 80 Kns~aV~KfleELvKIeFPGsK~V-sEa~sK~Gpa~vsgpi~fifeK 125 (217)
.+...++.|+++. ++.||-.-.- .+....||.. .=|.+|++++
T Consensus 65 ~~~~~~~~~~~~~-~~~~p~~~d~~~~~~~~~~v~--~~P~~~lid~ 108 (134)
T d1lu4a_ 65 ADVGAMQSFVSKY-NLNFTNLNDADGVIWARYNVP--WQPAFVFYRA 108 (134)
T ss_dssp SCHHHHHHHHHHH-TCCSEEEECTTSHHHHHTTCC--SSSEEEEECT
T ss_pred cchhhhhhhhhhh-ccccceeeCchHHHHHHcCCC--cCCEEEEEeC
Confidence 3557799999987 7999854322 2345568854 4488899886
No 4
>d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=12.61 E-value=37 Score=24.23 Aligned_cols=26 Identities=31% Similarity=0.502 Sum_probs=17.0
Q ss_pred HHHHHHHHHhh---cCCCchhhhhhhhhc
Q 027932 85 VHKLLEELVKI---EFPGSKAVSEASSKF 110 (217)
Q Consensus 85 V~KfleELvKI---eFPGsK~VsEa~sK~ 110 (217)
++..+-+|.+. .|||+..||=.-..+
T Consensus 25 ~~~~v~~~~~~~~~~FpG~qPvs~~~~~~ 53 (245)
T d1p16a2 25 LRLMVAELLGRRNTGFPGSQPVSFERRHL 53 (245)
T ss_dssp HHHHHHHHHTCSCCSCCCEEEEECCHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCcccccHHHH
Confidence 44445566655 799999998544443
No 5
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=12.08 E-value=70 Score=20.88 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=18.9
Q ss_pred chHhHHHhhccc--cccccccchHHHHHHHHHH
Q 027932 62 SSAEIKTLVKDR--KEDGLKKHSTAVHKLLEEL 92 (217)
Q Consensus 62 s~aeiK~LvKe~--k~~glKKns~aV~KfleEL 92 (217)
+..|+|.|++.- ..-+..+++..|.+++.+|
T Consensus 29 s~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~l 61 (93)
T d1ksoa_ 29 CQAELKELLQKELATWTPTEFRECDYNKFMSVL 61 (93)
T ss_dssp EHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcccccCCCHHHHHHHHHHH
Confidence 445777777653 2234455677777777765
No 6
>d2gkea2 d.21.1.1 (A:131-274) Diaminopimelate epimerase {Haemophilus influenzae [TaxId: 727]}
Probab=12.04 E-value=15 Score=26.67 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=23.1
Q ss_pred HhhcCCCchhhhhhhhhcCCccCCCceeEEeec
Q 027932 93 VKIEFPGSKAVSEASSKFGAASVPGPVFFIFEK 125 (217)
Q Consensus 93 vKIeFPGsK~VsEa~sK~Gpa~vsgpi~fifeK 125 (217)
.+|.+||-...-+-....+..+++||..++|+=
T Consensus 108 i~V~~~GG~l~V~~~~~~~~i~L~Gpa~~vf~G 140 (144)
T d2gkea2 108 VQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDG 140 (144)
T ss_dssp EEEEETTEEEEEEECCTTSCEEEEECCEEEEEE
T ss_pred EEEEECCCEEEEEEECCCCEEEEEecCEEEEEE
Confidence 468899977532222234567899999999973
No 7
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.36 E-value=66 Score=23.09 Aligned_cols=52 Identities=21% Similarity=0.318 Sum_probs=39.4
Q ss_pred chHhHHHhhcccc--ccccccchHHHHHHHHHHHhh-----cCCCchhhhhhhhhcCCc
Q 027932 62 SSAEIKTLVKDRK--EDGLKKHSTAVHKLLEELVKI-----EFPGSKAVSEASSKFGAA 113 (217)
Q Consensus 62 s~aeiK~LvKe~k--~~glKKns~aV~KfleELvKI-----eFPGsK~VsEa~sK~Gpa 113 (217)
..+-++.||+.-+ .+.++.-+.+-.-|.|-|.+| +..|..-+.++..+||-.
T Consensus 24 ~np~~k~li~~~k~y~~a~~~~~~a~~~f~dal~~~~~~~~~~~~~~~ig~~L~~~~~~ 82 (248)
T d1y2oa1 24 FNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEV 82 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHH
Confidence 4567888998854 566777788888898888886 568888888887777643
No 8
>d1kona_ e.39.1.1 (A:) Hypothetical protein YebC {Escherichia coli [TaxId: 562]}
Probab=8.93 E-value=43 Score=25.64 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=51.9
Q ss_pred hhhHHHHHHhhhhhhhHHHHhHHHhhhcccCCcc-eee-eeecchH-hHHHhhccccccccccchHHHHHHHHHHHhhcC
Q 027932 21 TKKAAAAEACKSFDDSKEEINKEFEEKKPELQPK-VVE-IYEASSA-EIKTLVKDRKEDGLKKHSTAVHKLLEELVKIEF 97 (217)
Q Consensus 21 ~KKAAAAEa~KsFdeSKE~i~kEfeeKKtELqPK-VvE-iYEas~a-eiK~LvKe~k~~glKKns~aV~KfleELvKIeF 97 (217)
.+=++|-+.+|.-+--|+-|++-|..-.-..+-. ..| +||.--+ -+-.||. .|--|.. ...-
T Consensus 45 ~~L~~ai~~Ak~~nmPkd~IeraIkk~~g~~~~~~~~e~~yEg~gp~gvaiiVe-----~lTDN~n---Rt~~------- 109 (244)
T d1kona_ 45 PRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIE-----CLSDNRN---RTVA------- 109 (244)
T ss_dssp TTTHHHHHHHHHTTCCHHHHHHHHSCC------CCCEEEEEEEEETTTEEEEEE-----EEESCHH---HHHH-------
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHhccCCCCCCceEEEEEEEEcCCccEEEEE-----EecCcHH---HHHH-------
Confidence 3556777889999999999999996433222221 111 4554322 1222221 1111211 1111
Q ss_pred CCchhhhhhhhhcCCcc-CCCceeEEeecccccee
Q 027932 98 PGSKAVSEASSKFGAAS-VPGPVFFIFEKVSTFIV 131 (217)
Q Consensus 98 PGsK~VsEa~sK~Gpa~-vsgpi~fifeKVstfi~ 131 (217)
-|.-..+|+|-.| -+|+|.|.|+++..+..
T Consensus 110 ----~vR~~f~K~gG~lg~~GsV~~~F~~kG~i~~ 140 (244)
T d1kona_ 110 ----EVRHAFSKCGGNLGTDGSVAYLFSKKGVISF 140 (244)
T ss_dssp ----HHHHHHHTTTCEECCTTSSGGGEEEEEEEEE
T ss_pred ----HHHHHHHHcCCeeCCCccHhhhhheeceecc
Confidence 2345677888777 57999999999997764
No 9
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=8.55 E-value=1.3e+02 Score=18.72 Aligned_cols=29 Identities=21% Similarity=0.142 Sum_probs=21.3
Q ss_pred cchHhHHHhhcccc-ccccccchHHHHHHHHH
Q 027932 61 ASSAEIKTLVKDRK-EDGLKKHSTAVHKLLEE 91 (217)
Q Consensus 61 as~aeiK~LvKe~k-~~glKKns~aV~KfleE 91 (217)
=||++|+..++..+ .+++ =+.+|.+||.|
T Consensus 125 ISST~IR~~i~~~~~i~~l--vP~~V~~yIke 154 (157)
T d1tfua_ 125 VSSSLAKEVAMLGGDVSEL--LPEPVNRRLRD 154 (157)
T ss_dssp CCHHHHHHHHHTTCCCGGG--SCHHHHHHHHH
T ss_pred ccHHHHHHHHHcCCChHHh--cCHHHHHHHHH
Confidence 48999999888754 4444 36789998864
No 10
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=8.23 E-value=1.3e+02 Score=19.40 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=17.3
Q ss_pred chHhHHHhhcccccccc--ccchHHHHHHHHHH
Q 027932 62 SSAEIKTLVKDRKEDGL--KKHSTAVHKLLEEL 92 (217)
Q Consensus 62 s~aeiK~LvKe~k~~gl--KKns~aV~KfleEL 92 (217)
+-.|+|.|++.-=.+.+ .++...|.+++.+|
T Consensus 28 sk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~l 60 (87)
T d1e8aa_ 28 SKGELKQLLTKELANTIKNIKDKAVIDEIFQGL 60 (87)
T ss_dssp CHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHccccccCCCCHHHHHHHHHHH
Confidence 34567777765322222 33556777777765
Done!