Query 027935
Match_columns 216
No_of_seqs 111 out of 1101
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 03:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027935.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027935hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 1.9E-47 4.2E-52 331.7 20.2 197 2-200 148-345 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 9.9E-47 2.2E-51 323.5 20.7 195 2-200 119-314 (315)
3 cd01847 Triacylglycerol_lipase 100.0 2E-41 4.4E-46 286.3 15.7 180 9-200 100-280 (281)
4 PRK15381 pathogenicity island 100.0 2.2E-39 4.9E-44 283.8 15.8 169 11-203 235-403 (408)
5 cd01846 fatty_acyltransferase_ 100.0 2.9E-38 6.3E-43 265.0 16.8 172 10-199 98-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.2E-29 2.5E-34 215.7 10.9 173 9-200 159-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 1.5E-21 3.3E-26 158.3 11.8 150 6-197 77-234 (234)
8 cd01834 SGNH_hydrolase_like_2 99.2 1.7E-10 3.7E-15 90.9 12.9 128 12-199 62-190 (191)
9 cd01833 XynB_like SGNH_hydrola 99.2 1.8E-10 3.8E-15 88.7 11.5 116 11-200 40-156 (157)
10 cd01841 NnaC_like NnaC (CMP-Ne 99.2 1.7E-10 3.6E-15 90.3 10.2 121 11-199 51-172 (174)
11 cd01839 SGNH_arylesterase_like 99.2 2E-10 4.2E-15 92.6 10.7 120 11-200 79-204 (208)
12 cd01836 FeeA_FeeB_like SGNH_hy 99.2 2.9E-10 6.4E-15 90.2 10.9 122 10-200 66-188 (191)
13 cd00229 SGNH_hydrolase SGNH_hy 99.1 8.2E-10 1.8E-14 84.6 11.4 126 6-199 60-186 (187)
14 cd01828 sialate_O-acetylestera 99.1 7.7E-10 1.7E-14 86.2 10.4 118 11-200 48-167 (169)
15 cd01838 Isoamyl_acetate_hydrol 99.1 1E-09 2.3E-14 87.0 10.6 134 11-200 63-198 (199)
16 cd04501 SGNH_hydrolase_like_4 99.1 1.6E-09 3.5E-14 85.4 10.6 124 10-199 58-181 (183)
17 cd01829 SGNH_hydrolase_peri2 S 99.1 2.6E-09 5.7E-14 85.2 11.5 139 11-200 59-197 (200)
18 cd04502 SGNH_hydrolase_like_7 99.0 3E-09 6.5E-14 83.0 10.7 119 11-199 50-169 (171)
19 cd01830 XynE_like SGNH_hydrola 99.0 2.5E-09 5.4E-14 86.1 10.2 128 12-199 75-202 (204)
20 cd01820 PAF_acetylesterase_lik 99.0 2.4E-09 5.2E-14 86.9 10.1 120 11-200 89-209 (214)
21 cd01832 SGNH_hydrolase_like_1 99.0 2.5E-09 5.5E-14 84.2 9.8 117 11-199 67-184 (185)
22 cd04506 SGNH_hydrolase_YpmR_li 99.0 4.5E-09 9.7E-14 84.3 10.6 133 11-199 68-203 (204)
23 PF13472 Lipase_GDSL_2: GDSL-l 99.0 3.6E-09 7.8E-14 81.5 9.3 121 9-193 59-179 (179)
24 cd01821 Rhamnogalacturan_acety 99.0 5.2E-09 1.1E-13 83.7 9.7 132 11-200 65-197 (198)
25 cd01823 SEST_like SEST_like. A 99.0 9.1E-09 2E-13 85.6 11.4 162 11-199 80-258 (259)
26 PRK10528 multifunctional acyl- 98.9 7.1E-09 1.5E-13 82.8 9.6 111 11-200 71-182 (191)
27 cd01827 sialate_O-acetylestera 98.9 1.2E-08 2.5E-13 80.7 10.7 119 11-200 67-186 (188)
28 cd01844 SGNH_hydrolase_like_6 98.9 5.9E-08 1.3E-12 76.3 12.5 118 11-199 57-175 (177)
29 cd01835 SGNH_hydrolase_like_3 98.9 1.2E-08 2.6E-13 81.1 8.6 123 11-199 69-191 (193)
30 cd01824 Phospholipase_B_like P 98.9 3E-08 6.4E-13 84.3 11.4 147 13-200 121-282 (288)
31 cd01825 SGNH_hydrolase_peri1 S 98.8 2E-08 4.4E-13 79.1 8.7 129 10-200 55-184 (189)
32 cd01826 acyloxyacyl_hydrolase_ 98.7 3.4E-07 7.4E-12 77.5 13.6 149 13-199 124-304 (305)
33 cd01822 Lysophospholipase_L1_l 98.7 1.8E-07 3.9E-12 72.9 10.4 112 11-200 64-175 (177)
34 cd01840 SGNH_hydrolase_yrhL_li 98.7 1.4E-07 3.1E-12 72.3 9.3 99 11-199 50-148 (150)
35 cd01831 Endoglucanase_E_like E 98.7 2.6E-07 5.6E-12 72.1 10.1 111 12-200 56-167 (169)
36 KOG3035 Isoamyl acetate-hydrol 98.3 5E-06 1.1E-10 66.7 8.2 139 11-200 68-207 (245)
37 COG2755 TesA Lysophospholipase 98.0 7E-05 1.5E-09 60.4 10.5 24 178-201 185-208 (216)
38 PF14606 Lipase_GDSL_3: GDSL-l 97.2 0.0014 2.9E-08 51.8 7.2 116 11-199 59-175 (178)
39 COG2845 Uncharacterized protei 96.7 0.013 2.8E-07 50.1 9.2 136 10-199 176-315 (354)
40 KOG3670 Phospholipase [Lipid t 96.6 0.018 3.9E-07 50.5 9.3 51 13-71 186-236 (397)
41 cd01842 SGNH_hydrolase_like_5 95.5 0.34 7.3E-06 38.3 10.8 128 13-200 52-181 (183)
42 PF08885 GSCFA: GSCFA family; 92.2 1.1 2.5E-05 37.3 8.6 140 8-196 98-250 (251)
43 COG3240 Phospholipase/lecithin 89.0 0.47 1E-05 41.5 3.6 70 9-84 96-165 (370)
44 PF13839 PC-Esterase: GDSL/SGN 88.1 7.7 0.00017 31.6 10.3 149 11-199 100-259 (263)
45 PLN02757 sirohydrochlorine fer 78.8 7 0.00015 30.1 5.8 63 53-138 60-125 (154)
46 PF04914 DltD_C: DltD C-termin 70.4 42 0.00092 25.0 8.2 26 174-199 100-125 (130)
47 PRK13384 delta-aminolevulinic 70.3 20 0.00042 31.0 6.8 66 46-129 56-121 (322)
48 cd04823 ALAD_PBGS_aspartate_ri 69.3 20 0.00043 31.0 6.6 67 46-129 49-116 (320)
49 cd04824 eu_ALAD_PBGS_cysteine_ 67.2 24 0.00053 30.4 6.7 67 46-129 46-114 (320)
50 cd03416 CbiX_SirB_N Sirohydroc 65.6 19 0.00041 25.0 5.1 53 53-128 46-98 (101)
51 cd00384 ALAD_PBGS Porphobilino 61.5 35 0.00076 29.4 6.7 66 46-129 46-111 (314)
52 PF02633 Creatininase: Creatin 58.8 55 0.0012 26.7 7.4 83 17-136 62-144 (237)
53 PF01903 CbiX: CbiX; InterPro 58.7 10 0.00022 26.5 2.7 51 55-128 41-91 (105)
54 PF08029 HisG_C: HisG, C-termi 54.6 14 0.00031 24.8 2.6 21 53-73 52-72 (75)
55 PF00490 ALAD: Delta-aminolevu 53.4 58 0.0013 28.2 6.7 66 48-129 54-119 (324)
56 PF06908 DUF1273: Protein of u 52.5 39 0.00084 26.6 5.2 29 44-72 22-50 (177)
57 PRK09283 delta-aminolevulinic 51.2 60 0.0013 28.2 6.5 66 46-129 54-119 (323)
58 cd03412 CbiK_N Anaerobic cobal 51.1 67 0.0015 23.6 6.1 26 50-75 55-80 (127)
59 COG4531 ZnuA ABC-type Zn2+ tra 50.8 47 0.001 28.3 5.6 49 94-148 179-231 (318)
60 PRK13660 hypothetical protein; 50.5 1E+02 0.0022 24.4 7.3 55 46-128 24-78 (182)
61 TIGR03455 HisG_C-term ATP phos 48.0 24 0.00053 25.0 3.1 23 51-73 74-96 (100)
62 COG0113 HemB Delta-aminolevuli 46.7 41 0.00088 29.0 4.7 32 45-76 55-86 (330)
63 PRK06520 5-methyltetrahydropte 44.1 79 0.0017 27.9 6.4 37 41-78 160-196 (368)
64 KOG2794 Delta-aminolevulinic a 41.9 38 0.00082 28.7 3.8 68 47-130 65-132 (340)
65 PRK13717 conjugal transfer pro 37.5 86 0.0019 23.4 4.6 26 94-119 70-95 (128)
66 PF02896 PEP-utilizers_C: PEP- 37.3 75 0.0016 27.2 5.0 21 7-29 192-212 (293)
67 PF08331 DUF1730: Domain of un 36.0 1.1E+02 0.0024 20.4 4.8 66 62-128 8-77 (78)
68 cd03414 CbiX_SirB_C Sirohydroc 35.2 1.5E+02 0.0033 20.9 5.8 20 53-72 47-66 (117)
69 cd03311 CIMS_C_terminal_like C 33.2 1.8E+02 0.0039 24.9 6.9 38 41-79 145-182 (332)
70 cd03411 Ferrochelatase_N Ferro 32.5 54 0.0012 25.0 3.2 24 53-76 101-124 (159)
71 PF12872 OST-HTH: OST-HTH/LOTU 32.0 94 0.002 19.9 3.9 27 123-149 23-51 (74)
72 COG3741 HutG N-formylglutamate 31.3 68 0.0015 27.0 3.7 42 93-136 118-159 (272)
73 PF04311 DUF459: Protein of un 31.2 1.4E+02 0.0029 26.1 5.6 24 177-200 296-319 (327)
74 TIGR02744 TrbI_Ftype type-F co 31.1 1.3E+02 0.0027 22.0 4.6 26 94-119 57-82 (112)
75 TIGR01091 upp uracil phosphori 30.8 1.8E+02 0.0039 23.3 6.0 53 49-133 134-186 (207)
76 PF06812 ImpA-rel_N: ImpA-rela 30.5 19 0.00041 23.0 0.2 8 179-186 53-60 (62)
77 PRK06233 hypothetical protein; 30.2 2E+02 0.0044 25.3 6.8 37 41-78 161-197 (372)
78 PF07394 DUF1501: Protein of u 30.0 1E+02 0.0022 27.1 4.9 64 12-85 246-310 (392)
79 PF07318 DUF1464: Protein of u 29.2 1.7E+02 0.0037 25.7 5.9 77 53-134 90-166 (343)
80 COG1080 PtsA Phosphoenolpyruva 28.8 27 0.00059 32.6 1.0 23 6-29 439-461 (574)
81 cd03413 CbiK_C Anaerobic cobal 27.6 73 0.0016 22.6 2.9 22 53-74 44-65 (103)
82 PRK09121 5-methyltetrahydropte 27.5 1.9E+02 0.004 25.2 6.0 36 41-77 146-181 (339)
83 cd03409 Chelatase_Class_II Cla 27.2 91 0.002 21.2 3.4 24 53-76 47-70 (101)
84 PF02384 N6_Mtase: N-6 DNA Met 26.7 53 0.0012 27.7 2.4 55 99-157 5-59 (311)
85 COG3605 PtsP Signal transducti 25.9 35 0.00076 32.2 1.2 19 10-29 616-634 (756)
86 COG3581 Uncharacterized protei 25.7 1E+02 0.0023 27.6 4.0 47 59-130 327-373 (420)
87 cd03415 CbiX_CbiC Archaeal sir 24.3 86 0.0019 23.1 2.8 20 52-71 45-64 (125)
88 PRK00129 upp uracil phosphorib 23.3 2.9E+02 0.0063 22.1 6.0 50 49-130 136-185 (209)
89 PRK05800 cobU adenosylcobinami 22.7 3.2E+02 0.007 21.0 6.0 33 51-83 103-135 (170)
90 cd00419 Ferrochelatase_C Ferro 22.6 3.2E+02 0.007 20.2 5.8 20 53-72 79-98 (135)
91 PF13259 DUF4050: Protein of u 22.3 91 0.002 22.9 2.7 29 187-215 81-109 (122)
92 COG4053 Uncharacterized protei 22.2 4.2E+02 0.0092 21.4 8.8 26 48-73 23-48 (244)
93 COG4474 Uncharacterized protei 21.8 4E+02 0.0088 21.0 7.7 55 46-128 24-78 (180)
94 PF14681 UPRTase: Uracil phosp 21.5 2.5E+02 0.0054 22.4 5.3 48 50-129 134-183 (207)
95 PF09677 TrbI_Ftype: Type-F co 21.0 2.5E+02 0.0055 20.2 4.7 25 95-119 57-81 (111)
96 PF09035 Tn916-Xis: Excisionas 20.1 98 0.0021 20.3 2.2 22 1-22 25-49 (67)
97 TIGR02171 Fb_sc_TIGR02171 Fibr 20.1 4.6E+02 0.01 26.3 7.4 77 43-132 800-876 (912)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=1.9e-47 Score=331.68 Aligned_cols=197 Identities=33% Similarity=0.672 Sum_probs=173.2
Q ss_pred ChHHHHHHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCcccc
Q 027935 2 DERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPN 81 (216)
Q Consensus 2 g~~~~~~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~ 81 (216)
|+++++++.+++||+||||+|||+..|+..+ .+....+++++++.+++.+.+.|++||++|||+|+|+++||+||+|.
T Consensus 148 g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~--~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~ 225 (351)
T PLN03156 148 GEEKANEIISEALYLISIGTNDFLENYYTFP--GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPL 225 (351)
T ss_pred ChHHHHHHHhcCeEEEEecchhHHHHhhccc--cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHH
Confidence 5566778899999999999999986554221 11223456789999999999999999999999999999999999999
Q ss_pred ccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCc
Q 027935 82 QLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQ 161 (216)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~ 161 (216)
.+.....+..+|.+.++.++..||++|+.++++|++++||++|+++|+|+++.++++||++|||++++++||+.|.++..
T Consensus 226 ~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~ 305 (351)
T PLN03156 226 ERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMG 305 (351)
T ss_pred HHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCc
Confidence 76542223457999999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred cccCCCC-CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 162 ITCLPFS-IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 162 ~~c~~~~-~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
..|++.. ..|++|++|+|||++|||+++|+++|+.+++.
T Consensus 306 ~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~ 345 (351)
T PLN03156 306 YLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKT 345 (351)
T ss_pred cccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence 8899765 58999999999999999999999999999885
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=9.9e-47 Score=323.46 Aligned_cols=195 Identities=36% Similarity=0.754 Sum_probs=173.3
Q ss_pred ChHHHHHHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCcccc
Q 027935 2 DERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPN 81 (216)
Q Consensus 2 g~~~~~~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~ 81 (216)
|++++.++.+++||+||||+|||+..+.... ....+..++++.+++++.++|++|+++|||+|+|+++||+||+|.
T Consensus 119 g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~----~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~ 194 (315)
T cd01837 119 GEEAAADILSKSLFLISIGSNDYLNNYFANP----TRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPS 194 (315)
T ss_pred CHHHHHHHHhCCEEEEEecccccHHHHhcCc----cccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHH
Confidence 6677788999999999999999986553211 102456789999999999999999999999999999999999999
Q ss_pred ccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCc
Q 027935 82 QLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQ 161 (216)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~ 161 (216)
.+.....+..+|.+.++.++..||++|+++|++|++++|+++|+++|+|+++.++++||++|||+++.++||+.|..+..
T Consensus 195 ~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~ 274 (315)
T cd01837 195 QRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGG 274 (315)
T ss_pred HHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcc
Confidence 88654223468999999999999999999999999999999999999999999999999999999999999998877777
Q ss_pred cccCCC-CCCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 162 ITCLPF-SIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 162 ~~c~~~-~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
..|... ..+|++|++|+|||++|||+++|++||+.++++
T Consensus 275 ~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 275 LLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred cccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 788764 578999999999999999999999999999875
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=2e-41 Score=286.25 Aligned_cols=180 Identities=23% Similarity=0.349 Sum_probs=151.4
Q ss_pred HhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccC
Q 027935 9 HLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 9 ~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
+.+++||+||||+|||+..+.... .......++.++++.+++++..+|++|+++|||+|+|+++||+||+|......
T Consensus 100 ~~~~sL~~i~iG~ND~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~-- 176 (281)
T cd01847 100 FDPNALYTVWIGGNDLIAALAALT-TATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP-- 176 (281)
T ss_pred CCCCeEEEEecChhHHHHHHhhcc-ccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc--
Confidence 368999999999999996554321 11111234678999999999999999999999999999999999999987652
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCC-C
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLP-F 167 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~-~ 167 (216)
..|.+.++.++..||++|+.++++|+++ +|+++|+|.++.++++||++|||++++++||+.+.... |.. .
T Consensus 177 --~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~~~~---~~~~~ 247 (281)
T cd01847 177 --AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTSAAG---SGAAT 247 (281)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCCccc---ccccc
Confidence 3567889999999999999999988653 89999999999999999999999999999999754332 432 2
Q ss_pred CCCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 168 SIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 168 ~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
...|++|++|+|||++|||+++|+++|+++++.
T Consensus 248 ~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 248 LVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred ccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 257999999999999999999999999998863
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=2.2e-39 Score=283.82 Aligned_cols=169 Identities=20% Similarity=0.238 Sum_probs=151.1
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
+++||+||+|+|||+ .+. .+.++.+++.+..+|++|+++|||+|+|+|+||+||+|..+...
T Consensus 235 ~~aL~lV~iG~NDy~-~~~-------------~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~~---- 296 (408)
T PRK15381 235 HQDLAIFLLGANDYM-TLH-------------KDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHSD---- 296 (408)
T ss_pred CCcEEEEEeccchHH-HhH-------------HHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhccC----
Confidence 689999999999998 341 23578899999999999999999999999999999999987421
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
..+.++.++..||++|+.+|++|++++||++|+++|+|+++.++++||++|||++++. ||+.|..+....|.+...+
T Consensus 297 --~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p~~~~ 373 (408)
T PRK15381 297 --EKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDPQLDI 373 (408)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCccCCccccCcccCC
Confidence 2478899999999999999999999999999999999999999999999999999876 9998877766789888888
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhcCCCC
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSS 203 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~~~~ 203 (216)
|. +|+|||.+|||+++|+++|..+.+.+.+
T Consensus 374 C~---~YvFWD~vHPTe~ah~iiA~~~~~~i~~ 403 (408)
T PRK15381 374 CP---QYVFNDLVHPTQEVHHCFAIMLESFIAH 403 (408)
T ss_pred CC---ceEecCCCCChHHHHHHHHHHHHHHHHH
Confidence 94 9999999999999999999999886543
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=2.9e-38 Score=265.01 Aligned_cols=172 Identities=27% Similarity=0.488 Sum_probs=151.9
Q ss_pred hcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCC
Q 027935 10 LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
.+++||+||+|+||+...+.. .......++.+++++.++|++|+++|+|+|+|+++||++|+|........
T Consensus 98 ~~~~l~~i~~G~ND~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~- 168 (270)
T cd01846 98 PPDTLVAIWIGANDLLNALDL--------PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA- 168 (270)
T ss_pred CCCcEEEEEeccchhhhhccc--------cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc-
Confidence 477999999999999854321 11234678899999999999999999999999999999999999876421
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
..+.++.+++.||++|++++++|++++|+++|+++|+|+++.+++++|++|||+++..+||+.+. |.+...
T Consensus 169 ---~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~~------~~~~~~ 239 (270)
T cd01846 169 ---VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDYVY------SYSPRE 239 (270)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCCCc------cccccC
Confidence 12688999999999999999999999999999999999999999999999999999999999642 766778
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
.|.+|++|+|||++|||+++|++||+.+++
T Consensus 240 ~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 240 ACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred CCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 999999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.96 E-value=1.2e-29 Score=215.70 Aligned_cols=173 Identities=24% Similarity=0.335 Sum_probs=140.9
Q ss_pred HhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccC
Q 027935 9 HLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 9 ~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
..++.|+.||.|+||++..-.. .....+.+......++...|++|+++|||+++|+++|+++.+|......
T Consensus 159 l~p~~l~~~~ggand~~~~~~~-------~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-- 229 (370)
T COG3240 159 LDPSALYFLWGGANDYLALPML-------KAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-- 229 (370)
T ss_pred cCHHHHHHHhhcchhhhccccc-------chhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc--
Confidence 4567889999999999853211 1111122333345689999999999999999999999999999998643
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
.....+..++..||..|.+.|+.+ +.+|+.+|++.++++++++|++|||+|++..||.....++ .|++..
T Consensus 230 ---~~~~~a~~~t~~~Na~L~~~L~~~-----g~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~ 299 (370)
T COG3240 230 ---TEAIQASQATIAFNASLTSQLEQL-----GGNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASL 299 (370)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHHh-----cCcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--cccccc
Confidence 223378899999999999999876 4799999999999999999999999999999998755444 677766
Q ss_pred CCC-CCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 169 IPC-FNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 169 ~~c-~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+.| ..|++|+|||.+|||+++|++||+++++.
T Consensus 300 p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~ 332 (370)
T COG3240 300 PALCAAPQKYLFADSVHPTTAVHHLIAEYILAR 332 (370)
T ss_pred ccccCCccceeeecccCCchHHHHHHHHHHHHH
Confidence 554 56778999999999999999999999985
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.87 E-value=1.5e-21 Score=158.32 Aligned_cols=150 Identities=27% Similarity=0.564 Sum_probs=121.2
Q ss_pred HHHHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCe-----EEEEecCCCCCccc
Q 027935 6 LQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMR-----KFLLAAIGPLGCMP 80 (216)
Q Consensus 6 ~~~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar-----~~vv~~lp~l~~~P 80 (216)
.....+.+|++||+|+||++. . .........++.+++++.++|++|...|++ +++++++||+++.|
T Consensus 77 ~~~~~~~~lv~i~~G~ND~~~--~-------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (234)
T PF00657_consen 77 SKSFYDPDLVVIWIGTNDYFN--N-------RDSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLP 147 (234)
T ss_dssp HHHHHTTSEEEEE-SHHHHSS--C-------CSCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGST
T ss_pred ccccCCcceEEEecccCcchh--h-------cccchhhhhHhhHhhhhhhhhhHHhccCCcccccccccccccccccccc
Confidence 445678899999999999873 1 112234567889999999999999999999 99999999999888
Q ss_pred cccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCC-CceEEEecchHHHHHH--HhCCCCCCccccCcccccccc
Q 027935 81 NQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYT-EATFVYGNTYGLFTEI--LNNPVFYGLSVTDRGCCGIGR 157 (216)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~i--~~~p~~yGf~~~~~~C~~~g~ 157 (216)
....... ....|.+.++..+..||+.|++.+..+++.++ +.++.++|+++.+.+. ..+|..
T Consensus 148 ~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~--------------- 211 (234)
T PF00657_consen 148 AWSSNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN--------------- 211 (234)
T ss_dssp THHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH---------------
T ss_pred ccccccc-cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCccc---------------
Confidence 7665432 23578899999999999999999999887665 7899999999999987 555433
Q ss_pred cCCccccCCCCCCCCCCCCceeeCCCChHHHHHHHHHHHH
Q 027935 158 NRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRA 197 (216)
Q Consensus 158 ~~~~~~c~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~ 197 (216)
++|+|||++|||++||++||+++
T Consensus 212 -----------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 212 -----------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp -----------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred -----------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 47899999999999999999975
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.25 E-value=1.7e-10 Score=90.95 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=86.0
Q ss_pred CccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHH-HcCCeEEEEecCCCCCccccccccccCCC
Q 027935 12 KSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVY-NLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 12 ~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~-~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
-++++|++|+||+...+. .. ...+...+++...|+.+. .....+|++++.+|....+...
T Consensus 62 ~d~v~l~~G~ND~~~~~~--------~~----~~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------- 122 (191)
T cd01834 62 PDVVSIMFGINDSFRGFD--------DP----VGLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------- 122 (191)
T ss_pred CCEEEEEeecchHhhccc--------cc----ccHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC-------
Confidence 479999999999974211 00 114556777888888885 3344567887766643221100
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
......+.....||+.+++..++ .++.++|+++.+.+....+
T Consensus 123 -~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------ 164 (191)
T cd01834 123 -PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------ 164 (191)
T ss_pred -CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC------------------------------
Confidence 01244566778888888876542 2578999999987644321
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
+.+++++|++||+++||++||+.+.+
T Consensus 165 ---~~~~~~~D~~Hpn~~G~~~~a~~~~~ 190 (191)
T cd01834 165 ---GEAVLTVDGVHPNEAGHRALARLWLE 190 (191)
T ss_pred ---CCccccCCCCCCCHHHHHHHHHHHHh
Confidence 13457899999999999999999875
No 9
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.22 E-value=1.8e-10 Score=88.66 Aligned_cols=116 Identities=17% Similarity=0.238 Sum_probs=84.4
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC-eEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM-RKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga-r~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
+-++++|.+|+||+... . + ++...+++.+.|+++.+.+. .+|++.++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~-~-----------~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN-R-----------D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccC-C-----------C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 45899999999998632 1 1 35567788888888877633 246777766643211
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
.+.....||+.+++.+++.... +.++.++|+++.+..
T Consensus 95 -------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~---------------------------------- 131 (157)
T cd01833 95 -------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT---------------------------------- 131 (157)
T ss_pred -------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC----------------------------------
Confidence 1456789999999999886543 567899998865521
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+++.+|++|||++||+.||+.+++.
T Consensus 132 ------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ------cccccCCCCCchHHHHHHHHHHHhh
Confidence 2367899999999999999998863
No 10
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.19 E-value=1.7e-10 Score=90.30 Aligned_cols=121 Identities=15% Similarity=0.135 Sum_probs=83.7
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHc-CCeEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNL-GMRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~-Gar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
.-++++|++|+||+... . + .+...+++...++++.+. ...+++++++||....+.
T Consensus 51 ~pd~v~i~~G~ND~~~~-~-----------~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE-V-----------S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------- 106 (174)
T ss_pred CCCEEEEEeccccCCCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------
Confidence 34789999999998521 1 1 355677888888888775 356789999888653322
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
.....+.....||+.+++..++ .++.++|+++.+..-. |
T Consensus 107 ---~~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~~------~------------------------- 145 (174)
T cd01841 107 ---IKTRSNTRIQRLNDAIKELAPE-------LGVTFIDLNDVLVDEF------G------------------------- 145 (174)
T ss_pred ---cccCCHHHHHHHHHHHHHHHHH-------CCCEEEEcHHHHcCCC------C-------------------------
Confidence 0112345678999999986543 2478999998773200 0
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
...+.+..|++|||++||++||+.+.+
T Consensus 146 ---~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 ---NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ---CccccccCCCcccCHHHHHHHHHHHHh
Confidence 111235689999999999999999865
No 11
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.19 E-value=2e-10 Score=92.64 Aligned_cols=120 Identities=14% Similarity=0.112 Sum_probs=79.2
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHc------CCeEEEEecCCCCCccccccc
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNL------GMRKFLLAAIGPLGCMPNQLA 84 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~------Gar~~vv~~lp~l~~~P~~~~ 84 (216)
+-++++|++|+||+... ... + .+...+++.+.|+.+.+. +..++++++.||+...+...
T Consensus 79 ~pd~vii~lGtND~~~~-~~~---------~----~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~- 143 (208)
T cd01839 79 PLDLVIIMLGTNDLKSY-FNL---------S----AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL- 143 (208)
T ss_pred CCCEEEEeccccccccc-cCC---------C----HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-
Confidence 45899999999998631 110 1 245566777777777665 45678999988872111111
Q ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCcccc
Q 027935 85 TGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITC 164 (216)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c 164 (216)
.......+.....||+.+++..++. ++.++|++.++..
T Consensus 144 ------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~----------------------------- 181 (208)
T cd01839 144 ------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST----------------------------- 181 (208)
T ss_pred ------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc-----------------------------
Confidence 1112233566788888888776532 4678898754410
Q ss_pred CCCCCCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 165 LPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 165 ~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+..|++|||++||++||+.+++.
T Consensus 182 -------------~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 -------------SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred -------------CCCCccCcCHHHHHHHHHHHHHH
Confidence 23799999999999999998874
No 12
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.17 E-value=2.9e-10 Score=90.21 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=83.0
Q ss_pred hcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHH-cCCeEEEEecCCCCCccccccccccC
Q 027935 10 LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYN-LGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~-~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
.+-++++|.+|+||+.. .. + .+...+++.+.++++.+ ....+|++.++||++..|.....
T Consensus 66 ~~pd~Vii~~G~ND~~~-~~-----------~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~~--- 126 (191)
T cd01836 66 TRFDVAVISIGVNDVTH-LT-----------S----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQP--- 126 (191)
T ss_pred CCCCEEEEEecccCcCC-CC-----------C----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcHH---
Confidence 35589999999999862 11 1 35567778888888876 34557999999998765533211
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
....+++....+|+.+++..++ ++ ++.++|++..+.
T Consensus 127 ----~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~---------------------------------- 162 (191)
T cd01836 127 ----LRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF---------------------------------- 162 (191)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc----------------------------------
Confidence 1223445667777777766543 22 677889875442
Q ss_pred CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 169 IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 169 ~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+++..|++|||++||+++|+.+.+.
T Consensus 163 ------~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ------PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ------hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 12345699999999999999998764
No 13
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.13 E-value=8.2e-10 Score=84.59 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=86.5
Q ss_pred HHHHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHH-cCCeEEEEecCCCCCccccccc
Q 027935 6 LQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYN-LGMRKFLLAAIGPLGCMPNQLA 84 (216)
Q Consensus 6 ~~~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~-~Gar~~vv~~lp~l~~~P~~~~ 84 (216)
.....+.++++|.+|+||+... .. .......+.+...++.+.+ ....+|++.+.|+....|.
T Consensus 60 ~~~~~~~d~vil~~G~ND~~~~-~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--- 122 (187)
T cd00229 60 ALLKDKPDLVIIELGTNDLGRG-GD-------------TSIDEFKANLEELLDALRERAPGAKVILITPPPPPPREG--- 122 (187)
T ss_pred hhccCCCCEEEEEecccccccc-cc-------------cCHHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch---
Confidence 3445667899999999998631 10 0133455566666666664 4455689999888775544
Q ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCcccc
Q 027935 85 TGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITC 164 (216)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c 164 (216)
........+|..+++........ ..+.++|++..+...
T Consensus 123 -----------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~---------------------------- 160 (187)
T cd00229 123 -----------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE---------------------------- 160 (187)
T ss_pred -----------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC----------------------------
Confidence 12345677888887776654321 357889998766431
Q ss_pred CCCCCCCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 165 LPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 165 ~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
+..++++|++|||++||+.+|+.+++
T Consensus 161 ---------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ---------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ---------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34668899999999999999999875
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.11 E-value=7.7e-10 Score=86.18 Aligned_cols=118 Identities=16% Similarity=0.247 Sum_probs=81.3
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHH--cCCeEEEEecCCCCCccccccccccC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYN--LGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~--~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
..++++|.+|+||.... . + .+...+++...|+.+.+ .++ +|++.++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~-~-----------~----~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQG-T-----------S----DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc-------
Confidence 55899999999998521 1 1 24566777777877777 455 58888888865 10
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
.......+..||+.+++..++ .++.++|+++.+.+- .|
T Consensus 102 -----~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~------~~------------------------ 139 (169)
T cd01828 102 -----KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTNA------DG------------------------ 139 (169)
T ss_pred -----CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcCC------CC------------------------
Confidence 011234668899998876552 256789998766220 00
Q ss_pred CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 169 IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 169 ~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
...+++..|++|||++||+++|+.+...
T Consensus 140 ----~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 ----DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred ----CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 1234577899999999999999998864
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=99.09 E-value=1e-09 Score=87.00 Aligned_cols=134 Identities=12% Similarity=0.041 Sum_probs=84.2
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHH--cCCeEEEEecCCCCCccccccccccC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYN--LGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~--~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
+-++++|++|+||....... ...+ .+...+++...|+++.+ .|+ ++++++.||............
T Consensus 63 ~pd~vii~~G~ND~~~~~~~-------~~~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~- 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQP-------QHVP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED- 129 (199)
T ss_pred CceEEEEEecCccccCCCCC-------Cccc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-
Confidence 56799999999998632110 0011 35566777777777776 455 588888888653321110000
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
........++....||+.+++...+ .++.++|+++.+...-.
T Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~a~~-------~~~~~iD~~~~~~~~~~------------------------------ 171 (199)
T cd01838 130 -GGSQPGRTNELLKQYAEACVEVAEE-------LGVPVIDLWTAMQEEAG------------------------------ 171 (199)
T ss_pred -ccCCccccHHHHHHHHHHHHHHHHH-------hCCcEEEHHHHHHhccC------------------------------
Confidence 0111233456778888887776543 24779999987754100
Q ss_pred CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 169 IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 169 ~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
..+.++.|++||+++||++||+.+.+.
T Consensus 172 -----~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 172 -----WLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred -----chhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 112356799999999999999998764
No 16
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.06 E-value=1.6e-09 Score=85.36 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=83.2
Q ss_pred hcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCC
Q 027935 10 LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
..-++++|.+|+||.... . + .+...+++.+.|+.+.+.|++ +++++.||....+....
T Consensus 58 ~~~d~v~i~~G~ND~~~~-~-----------~----~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~~----- 115 (183)
T cd04501 58 LKPAVVIIMGGTNDIIVN-T-----------S----LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKPQ----- 115 (183)
T ss_pred cCCCEEEEEeccCccccC-C-----------C----HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccchh-----
Confidence 345889999999998521 0 1 345667788888888888875 66677777653332111
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
....+.....||+.+++...+ .++.++|+++.+.+...
T Consensus 116 ----~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~------------------------------- 153 (183)
T cd04501 116 ----WLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN------------------------------- 153 (183)
T ss_pred ----hcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc-------------------------------
Confidence 122345677888887776543 25789999988754111
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
......+..|++||+++||+++|+.+..
T Consensus 154 --~~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 154 --VGLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred --ccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 0122345679999999999999998865
No 17
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.05 E-value=2.6e-09 Score=85.23 Aligned_cols=139 Identities=11% Similarity=0.031 Sum_probs=84.2
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
.-++++|.+|+||+... .... .. .......+.+...+++...++.+.+.|++ +++++.||+..
T Consensus 59 ~pd~vii~~G~ND~~~~-~~~~--~~-~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------ 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDI-RDGD--GY-LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------ 121 (200)
T ss_pred CCCEEEEEecCCCCccc-cCCC--ce-eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC------------
Confidence 45889999999998632 2111 00 00111234556667777888777777775 88888887641
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
...+.....+|..+++...+ .++.++|++..+.+ .+.|+... ....
T Consensus 122 ----~~~~~~~~~~~~~~~~~a~~-------~~~~~id~~~~~~~-------------~~~~~~~~----------~~~~ 167 (200)
T cd01829 122 ----PKLSADMVYLNSLYREEVAK-------AGGEFVDVWDGFVD-------------ENGRFTYS----------GTDV 167 (200)
T ss_pred ----hhHhHHHHHHHHHHHHHHHH-------cCCEEEEhhHhhcC-------------CCCCeeee----------ccCC
Confidence 11234556788877766542 24789999977632 01122100 0001
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
......++..|++|||++||++||+.+.+.
T Consensus 168 ~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 168 NGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred CCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 112234556799999999999999998874
No 18
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.03 E-value=3e-09 Score=83.04 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC-eEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM-RKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga-r~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
..++++|.+|+||+... . + .+...+++.+.|+++.+.+. .+++++++||.. . .
T Consensus 50 ~p~~vvi~~G~ND~~~~-~-----------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~~---~--~----- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASG-R-----------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPSP---A--R----- 103 (171)
T ss_pred CCCEEEEEEecCcccCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCCC---c--c-----
Confidence 45799999999997421 1 1 45578888888888887753 357777765521 1 0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
.........+|+.+++..++ ..++.++|++..+.+.-.+
T Consensus 104 -----~~~~~~~~~~n~~~~~~a~~------~~~v~~vD~~~~~~~~~~~------------------------------ 142 (171)
T cd04502 104 -----WALRPKIRRFNALLKELAET------RPNLTYIDVASPMLDADGK------------------------------ 142 (171)
T ss_pred -----hhhHHHHHHHHHHHHHHHhc------CCCeEEEECcHHHhCCCCC------------------------------
Confidence 11223457788777776531 2367899999776431000
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
...+++..|++|||++||+++|+.+..
T Consensus 143 ---~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 ---PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred ---cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012456689999999999999998864
No 19
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.02 E-value=2.5e-09 Score=86.09 Aligned_cols=128 Identities=18% Similarity=0.089 Sum_probs=75.4
Q ss_pred CccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCC
Q 027935 12 KSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPG 91 (216)
Q Consensus 12 ~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~ 91 (216)
-++++|++|+||+....... . .+...++...+++...++++.+.|++ +++.++||+...+..
T Consensus 75 p~~vii~~G~ND~~~~~~~~-----~---~~~~~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~~~~~~--------- 136 (204)
T cd01830 75 VRTVIILEGVNDIGASGTDF-----A---AAPVTAEELIAGYRQLIRRAHARGIK-VIGATITPFEGSGYY--------- 136 (204)
T ss_pred CCEEEEeccccccccccccc-----c---cCCCCHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCCCCCCC---------
Confidence 36899999999986321110 0 11112566788899999999988874 788888886432211
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCCC
Q 027935 92 KCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPC 171 (216)
Q Consensus 92 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~c 171 (216)
......+...+|+.+++ ..... .++|+++.+.+... + .
T Consensus 137 --~~~~~~~~~~~n~~~~~--------~~~~~-~~vD~~~~~~~~~~-~------------------------------~ 174 (204)
T cd01830 137 --TPAREATRQAVNEWIRT--------SGAFD-AVVDFDAALRDPAD-P------------------------------S 174 (204)
T ss_pred --CHHHHHHHHHHHHHHHc--------cCCCC-eeeEhHHhhcCCCC-c------------------------------h
Confidence 11112222334443332 11222 36899977633100 0 0
Q ss_pred CCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 172 FNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 172 ~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
.-..+|+..|++|||++||++||+.+..
T Consensus 175 ~~~~~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 175 RLRPAYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred hcccccCCCCCCCCCHHHHHHHHHhcCC
Confidence 0012566689999999999999997753
No 20
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=99.02 E-value=2.4e-09 Score=86.87 Aligned_cols=120 Identities=18% Similarity=0.101 Sum_probs=80.2
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcC-CeEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLG-MRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~G-ar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
.-++++|++|+||+... . + .+...+++...|+++.+.. ..+|++++++|....|
T Consensus 89 ~pd~VvI~~G~ND~~~~-~-----------~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHT-T-----------T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------- 143 (214)
T ss_pred CCCEEEEEecccccCCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc---------
Confidence 35889999999998521 1 1 3556778888888888763 3468888888765321
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
..+......+|+.+++.+. . ..++.++|++..+.+. -|
T Consensus 144 -----~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~~------~g------------------------- 181 (214)
T cd01820 144 -----NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQS------DG------------------------- 181 (214)
T ss_pred -----hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhccc------CC-------------------------
Confidence 1223456778877765442 1 2368899998776320 00
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
...+.++.|++||+++||++||+.+.+.
T Consensus 182 ---~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 182 ---TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred ---CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 1112245799999999999999998874
No 21
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=99.01 E-value=2.5e-09 Score=84.22 Aligned_cols=117 Identities=17% Similarity=0.145 Sum_probs=79.5
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCC-CccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPL-GCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l-~~~P~~~~~~~~~ 89 (216)
.-++++|.+|+||.... . .+ .++..+++...|+++...+++ ++++++||. +..|..
T Consensus 67 ~~d~vii~~G~ND~~~~--~---------~~----~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~------- 123 (185)
T cd01832 67 RPDLVTLLAGGNDILRP--G---------TD----PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR------- 123 (185)
T ss_pred CCCEEEEeccccccccC--C---------CC----HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH-------
Confidence 55899999999998520 0 11 345667777888888766775 888898887 322111
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
.........+|+.|++..++ .++.++|++..+. +
T Consensus 124 -----~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~--------~-------------------------- 157 (185)
T cd01832 124 -----RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE--------F-------------------------- 157 (185)
T ss_pred -----HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc--------c--------------------------
Confidence 12344678888888877653 2578999875532 0
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
....++.-|++||+++||++||+.+++
T Consensus 158 ---~~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 158 ---ADPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ---CCccccccCCCCCChhHHHHHHHHHhh
Confidence 011234469999999999999999875
No 22
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.99 E-value=4.5e-09 Score=84.32 Aligned_cols=133 Identities=17% Similarity=0.276 Sum_probs=84.4
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCC-CCCChHhHHHHHHHHHHHHHHHHHHcCCe-EEEEecCC-CCCcccccccccc
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSS-SSYNPQQYADLLINHYTSHIMEVYNLGMR-KFLLAAIG-PLGCMPNQLATGL 87 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~v~~L~~~Gar-~~vv~~lp-~l~~~P~~~~~~~ 87 (216)
.-++++|.+|+||+........ .. .........+...+++...|+++.+.+.+ +|++++++ |.. ...
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~-- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNF---LSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYF-- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----ccc--
Confidence 5688999999999975432100 00 00111123456778888888888876543 57777753 321 111
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCC
Q 027935 88 APPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPF 167 (216)
Q Consensus 88 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~ 167 (216)
......+..+..||+.+++.+.+ + .++.++|+++.+...-
T Consensus 138 ----~~~~~~~~~~~~~n~~~~~~a~~----~--~~v~~vd~~~~~~~~~------------------------------ 177 (204)
T cd04506 138 ----PNITEINDIVNDWNEASQKLASQ----Y--KNAYFVPIFDLFSDGQ------------------------------ 177 (204)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHh----C--CCeEEEehHHhhcCCc------------------------------
Confidence 01223567888999888776542 1 2488999998774300
Q ss_pred CCCCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 168 SIPCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 168 ~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
+..++..|++||+++||+.||+.+++
T Consensus 178 ------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 ------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 12345679999999999999999875
No 23
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.98 E-value=3.6e-09 Score=81.52 Aligned_cols=121 Identities=19% Similarity=0.290 Sum_probs=80.8
Q ss_pred HhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccC
Q 027935 9 HLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 9 ~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
...-++++|.+|+||+... . ......+...+++...|+.+...+ +++++++||....+....
T Consensus 59 ~~~~d~vvi~~G~ND~~~~--~----------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~~---- 120 (179)
T PF13472_consen 59 DPKPDLVVISFGTNDVLNG--D----------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDPK---- 120 (179)
T ss_dssp GTTCSEEEEE--HHHHCTC--T----------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTTH----
T ss_pred cCCCCEEEEEccccccccc--c----------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccccc----
Confidence 3455799999999998731 1 123446778888889999997777 789999888653322211
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
..........+|+.+++..+ + .++.++|+...+.+ +.
T Consensus 121 -----~~~~~~~~~~~~~~~~~~a~----~---~~~~~id~~~~~~~----~~--------------------------- 157 (179)
T PF13472_consen 121 -----QDYLNRRIDRYNQAIRELAK----K---YGVPFIDLFDAFDD----HD--------------------------- 157 (179)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHH----H---CTEEEEEHHHHHBT----TT---------------------------
T ss_pred -----chhhhhhHHHHHHHHHHHHH----H---cCCEEEECHHHHcc----cc---------------------------
Confidence 23345667888888877654 2 26889999988632 10
Q ss_pred CCCCCCCCceeeCCCChHHHHHHHH
Q 027935 169 IPCFNRDQYLFWHAYHPSQAFNEIV 193 (216)
Q Consensus 169 ~~c~~~~~y~f~D~~HPT~~~h~~i 193 (216)
.....+++.|++|||++||++|
T Consensus 158 ---~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 ---GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp ---SCBHTCTBTTSSSBBHHHHHHH
T ss_pred ---ccchhhcCCCCCCcCHHHhCcC
Confidence 0122457799999999999986
No 24
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.96 E-value=5.2e-09 Score=83.69 Aligned_cols=132 Identities=13% Similarity=-0.014 Sum_probs=84.1
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
+.++++|.+|+||...... . ...-++...+++...|+++.+.|++ +++++.||... ...
T Consensus 65 ~pdlVii~~G~ND~~~~~~-------~----~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~~~------ 123 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDP-------E----YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---FDE------ 123 (198)
T ss_pred CCCEEEEECCCCCCCCCCC-------C----CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---cCC------
Confidence 4599999999999863111 0 0011456778888888888888886 56666555211 100
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
. ...+.....||+.+++..++. ++.++|++..+.+..+.-..-+ .
T Consensus 124 ~---~~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~~---~---------------------- 168 (198)
T cd01821 124 G---GKVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPEK---S---------------------- 168 (198)
T ss_pred C---CcccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChHh---H----------------------
Confidence 0 012334577888888776532 5679999999877554210000 0
Q ss_pred CCCCC-CceeeCCCChHHHHHHHHHHHHhcC
Q 027935 171 CFNRD-QYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 171 c~~~~-~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+. .++..|++||+++||++||+.+++.
T Consensus 169 --~~~~~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 169 --KKYFPEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred --HhhCcCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 000 2456799999999999999998763
No 25
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.95 E-value=9.1e-09 Score=85.56 Aligned_cols=162 Identities=12% Similarity=0.057 Sum_probs=88.6
Q ss_pred cCccEEEEeccchhhhhhcC-----CCCC------CCCCCCChHhHHHHHHHHHHHHHHHHHHc-CCeEEEEecCCCCCc
Q 027935 11 AKSLVVVNIGSNDYINNYLM-----PSTY------SSSSSYNPQQYADLLINHYTSHIMEVYNL-GMRKFLLAAIGPLGC 78 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~i~~~v~~L~~~-Gar~~vv~~lp~l~~ 78 (216)
.-+|++|++|+||+...... .... ............+...+++...|++|.+. +-.+|++++.|++..
T Consensus 80 ~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 80 DTDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 35889999999998532110 0000 00001112233556677788888888754 334699999887532
Q ss_pred ccccccc-----ccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccc
Q 027935 79 MPNQLAT-----GLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCC 153 (216)
Q Consensus 79 ~P~~~~~-----~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~ 153 (216)
.-..... ...-.....+..++....+|+.+++..++.. ..++.++|++..|.. ...|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~~----~~~v~fvD~~~~f~~-------------~~~~~ 222 (259)
T cd01823 160 PDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADAG----DYKVRFVDTDAPFAG-------------HRACS 222 (259)
T ss_pred CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC----CceEEEEECCCCcCC-------------Ccccc
Confidence 1000000 0000011234456777788888777765432 245899999976633 11222
Q ss_pred cccccCCccccCCCCCCCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 154 GIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 154 ~~g~~~~~~~c~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
.... +. .. .+....+.-|++|||.+||+.||+.+.+
T Consensus 223 ~~~~------~~-~~---~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 223 PDPW------SR-SV---LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCCc------cc-cc---cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 1100 00 00 0122335679999999999999999875
No 26
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.93 E-value=7.1e-09 Score=82.80 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=69.3
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEe-cCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLA-AIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~-~lp~l~~~P~~~~~~~~~ 89 (216)
..++++|.+|+||... .. + .+...+++...++.+.+.|++.+++. .+|+ ...
T Consensus 71 ~pd~Vii~~GtND~~~-~~-----------~----~~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~~------ 123 (191)
T PRK10528 71 QPRWVLVELGGNDGLR-GF-----------P----PQQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NYG------ 123 (191)
T ss_pred CCCEEEEEeccCcCcc-CC-----------C----HHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----ccc------
Confidence 4589999999999752 11 1 35667888888888888888866553 1222 110
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
....+.+|+.++ ++.+++ ++.++|.+.....
T Consensus 124 --------~~~~~~~~~~~~----~~a~~~---~v~~id~~~~~~~---------------------------------- 154 (191)
T PRK10528 124 --------RRYNEAFSAIYP----KLAKEF---DIPLLPFFMEEVY---------------------------------- 154 (191)
T ss_pred --------HHHHHHHHHHHH----HHHHHh---CCCccHHHHHhhc----------------------------------
Confidence 012234554444 444443 3567776522100
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
...+++..|++||+++||+.||+.+.+.
T Consensus 155 ---~~~~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 155 ---LKPQWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred ---cCHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0113466799999999999999999874
No 27
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.93 E-value=1.2e-08 Score=80.69 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=74.7
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC-eEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM-RKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga-r~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
..++++|.+|+||...... . . .+...+++...|+.+.+.+. .++++.+.||.......
T Consensus 67 ~pd~Vii~~G~ND~~~~~~------~----~----~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~~------- 125 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQNW------K----Y----KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDGG------- 125 (188)
T ss_pred CCCEEEEEcccCCCCCCCC------c----c----HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCCC-------
Confidence 4589999999999852110 0 1 23445677788887776654 36778777765321110
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
. ...+.....+|+.+++..++ .++.++|++..+..
T Consensus 126 ---~-~~~~~~~~~~~~~~~~~a~~-------~~~~~vD~~~~~~~---------------------------------- 160 (188)
T cd01827 126 ---F-INDNIIKKEIQPMIDKIAKK-------LNLKLIDLHTPLKG---------------------------------- 160 (188)
T ss_pred ---c-cchHHHHHHHHHHHHHHHHH-------cCCcEEEccccccC----------------------------------
Confidence 0 11133456677777665432 25678898865411
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+ .++-|++||+++||++||+.+++.
T Consensus 161 ---~~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 161 ---KP--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ---Cc--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 01 144699999999999999999874
No 28
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.86 E-value=5.9e-08 Score=76.28 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=73.8
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC-eEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM-RKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga-r~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
..++++|.+|+||... . ....+++...|++|.+.+. .+|++++.||. |......
T Consensus 57 ~pd~vii~~G~ND~~~--~-----------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~~--- 111 (177)
T cd01844 57 PADLYIIDCGPNIVGA--E-----------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELTP--- 111 (177)
T ss_pred CCCEEEEEeccCCCcc--H-----------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccCc---
Confidence 5589999999999631 0 1567788888888888764 45777777664 2221111
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
......++....+|+.+ +.++.. ...++.++|.++++..
T Consensus 112 --~~~~~~~~~~~~~~~~~----~~~~~~-~~~~v~~id~~~~~~~---------------------------------- 150 (177)
T cd01844 112 --GRGKLTLAVRRALREAF----EKLRAD-GVPNLYYLDGEELLGP---------------------------------- 150 (177)
T ss_pred --chhHHHHHHHHHHHHHH----HHHHhc-CCCCEEEecchhhcCC----------------------------------
Confidence 11223333444444444 333332 2347899998755411
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
+ .-++.|++|||++||++||+.+..
T Consensus 151 ---~--~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 ---D--GEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred ---C--CCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0 115679999999999999998875
No 29
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.86 E-value=1.2e-08 Score=81.09 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=74.1
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
..++++|.+|+||....... ....+ .+...+++...++++ +.++ +++++++||+....
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~------~~~~~----~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRK------RPQLS----ARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCc------ccccC----HHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 45899999999998632110 01111 233344444444433 3344 48888877764211
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
....+.....+|+.+++..++ .++.++|++..+.+. + +
T Consensus 127 ---~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~---~-------------------------- 164 (193)
T cd01835 127 ---MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---P---Q-------------------------- 164 (193)
T ss_pred ---cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---c---H--------------------------
Confidence 012345677888888876543 256799999776541 0 0
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
...+++..|++|||++||++||+.+.+
T Consensus 165 --~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 --WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred --HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 011233359999999999999998875
No 30
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.86 E-value=3e-08 Score=84.32 Aligned_cols=147 Identities=13% Similarity=0.162 Sum_probs=86.4
Q ss_pred ccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCe-EEEEecCCCCCccccccccccC---
Q 027935 13 SLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMR-KFLLAAIGPLGCMPNQLATGLA--- 88 (216)
Q Consensus 13 ~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar-~~vv~~lp~l~~~P~~~~~~~~--- 88 (216)
.|++|+||+||+.. +.... .. ...+...+++.+.++.|.+..-+ .|+++++|++..++........
T Consensus 121 klVtI~IG~ND~c~-~~~~~-----~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~ 190 (288)
T cd01824 121 KLITIFIGGNDLCS-LCEDA-----NP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCET 190 (288)
T ss_pred cEEEEEecchhHhh-hcccc-----cC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccc
Confidence 46999999999973 22111 11 12456677888888888877654 4777888887654443210000
Q ss_pred -CCCccc----------hHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccc
Q 027935 89 -PPGKCV----------AYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGR 157 (216)
Q Consensus 89 -~~~~~~----------~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~ 157 (216)
....|. ..+.++.+.|++.+.+.++.-.-+..+..+++ ..++.+.+..+..-|
T Consensus 191 ~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~~~~~g------------- 254 (288)
T cd01824 191 LLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSLPPLPDG------------- 254 (288)
T ss_pred cCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEe---eCchhccccccccCC-------------
Confidence 001121 35567788888888777654322223445555 223333221100001
Q ss_pred cCCccccCCCCCCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 158 NRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 158 ~~~~~~c~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+ .+|+-+|++|||++||.++|+.+|..
T Consensus 255 --------------~d-~~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 255 --------------PD-LSFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred --------------Cc-chhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 01 26678999999999999999999874
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.83 E-value=2e-08 Score=79.15 Aligned_cols=129 Identities=16% Similarity=0.074 Sum_probs=80.4
Q ss_pred hcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHc-CCeEEEEecCCCCCccccccccccC
Q 027935 10 LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNL-GMRKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~-Gar~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
..-++++|.+|+||...... + .+...+++...|+++.+. +..+|++++.||....+...
T Consensus 55 ~~pd~Vii~~G~ND~~~~~~-----------~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~~----- 114 (189)
T cd01825 55 LPPDLVILSYGTNEAFNKQL-----------N----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGAG----- 114 (189)
T ss_pred CCCCEEEEECCCcccccCCC-----------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCCC-----
Confidence 34589999999999752111 1 355677888888888774 44568888877653322100
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCC
Q 027935 89 PPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFS 168 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~ 168 (216)
....+.....+|+.+++..+ + ..+.++|+++.+.+. | +.
T Consensus 115 -----~~~~~~~~~~~~~~~~~~a~----~---~~v~~vd~~~~~~~~---------------~-~~------------- 153 (189)
T cd01825 115 -----RWRTPPGLDAVIAAQRRVAK----E---EGIAFWDLYAAMGGE---------------G-GI------------- 153 (189)
T ss_pred -----CcccCCcHHHHHHHHHHHHH----H---cCCeEEeHHHHhCCc---------------c-hh-------------
Confidence 00112235667776666643 2 247899999876321 0 00
Q ss_pred CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 169 IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 169 ~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.......++..|++|||++||+.||+.+.+.
T Consensus 154 -~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 154 -WQWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred -hHhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 0001123466799999999999999998874
No 32
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.73 E-value=3.4e-07 Score=77.51 Aligned_cols=149 Identities=13% Similarity=0.157 Sum_probs=85.5
Q ss_pred ccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCe--EEEEecCCCCCcc---------cc
Q 027935 13 SLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMR--KFLLAAIGPLGCM---------PN 81 (216)
Q Consensus 13 ~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar--~~vv~~lp~l~~~---------P~ 81 (216)
.+++|++|+||.... ... .... ..++.-.+++.+.|+.|.+...+ +|+++++|++... |.
T Consensus 124 ~lVtI~lGgND~C~g-~~d----~~~~----tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hpl 194 (305)
T cd01826 124 ALVIYSMIGNDVCNG-PND----TINH----TTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPI 194 (305)
T ss_pred eEEEEEeccchhhcC-CCc----cccC----cCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccc
Confidence 888999999998632 111 0111 22556678888999999888644 7999999995322 11
Q ss_pred cc--------cccc----CCCCccc------hHHHHHHHHHHHHHHHHHHHHHhh--CCCceEEEecchHHHHHHHhCCC
Q 027935 82 QL--------ATGL----APPGKCV------AYVNDMAQAFNTRLTALVDQLNSN--YTEATFVYGNTYGLFTEILNNPV 141 (216)
Q Consensus 82 ~~--------~~~~----~~~~~~~------~~~~~~~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~i~~~p~ 141 (216)
.. ..+. .....|. +....++..+=++|.....++.++ +..+.+++.|+. +..+.....
T Consensus 195 g~~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~ 272 (305)
T cd01826 195 GQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWI 272 (305)
T ss_pred hhcccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHH
Confidence 10 0000 0001232 122233444444444444444332 335678888874 444444333
Q ss_pred CCCccccCcccccccccCCccccCCCCCCCCCCCCcee-eCCCChHHHHHHHHHHHHhc
Q 027935 142 FYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLF-WHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 142 ~yGf~~~~~~C~~~g~~~~~~~c~~~~~~c~~~~~y~f-~D~~HPT~~~h~~ia~~~~~ 199 (216)
+.|- .+-+++- .|++|||++||.++|+.+|.
T Consensus 273 ~~g~---------------------------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 273 AFGG---------------------------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred hcCC---------------------------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 3331 2334455 69999999999999999986
No 33
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.70 E-value=1.8e-07 Score=72.93 Aligned_cols=112 Identities=16% Similarity=0.292 Sum_probs=70.0
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
+.++++|.+|+||.... . + .+...+++...|+++.+.|++ ++++++|. |....
T Consensus 64 ~pd~v~i~~G~ND~~~~-~-----------~----~~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~~------ 116 (177)
T cd01822 64 KPDLVILELGGNDGLRG-I-----------P----PDQTRANLRQMIETAQARGAP-VLLVGMQA----PPNYG------ 116 (177)
T ss_pred CCCEEEEeccCcccccC-C-----------C----HHHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCccc------
Confidence 45899999999997521 1 1 345677788888888888876 66666542 11000
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
......||+.+++..+ ++ ++.++|.+ +..+..
T Consensus 117 -------~~~~~~~~~~~~~~a~----~~---~~~~~d~~--~~~~~~-------------------------------- 148 (177)
T cd01822 117 -------PRYTRRFAAIYPELAE----EY---GVPLVPFF--LEGVAG-------------------------------- 148 (177)
T ss_pred -------hHHHHHHHHHHHHHHH----Hc---CCcEechH--Hhhhhh--------------------------------
Confidence 0124566766665543 32 35577753 111111
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+ .+++.-|++|||++||++||+.+.+.
T Consensus 149 --~-~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 149 --D-PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred --C-hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 1 13355799999999999999998864
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.69 E-value=1.4e-07 Score=72.34 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=63.4
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
...+++|.+|+||.. . .+++.+.++.+ ..| +++++++.++ | .
T Consensus 50 ~~d~vvi~lGtNd~~---~--------------------~~nl~~ii~~~-~~~-~~ivlv~~~~----~---~------ 91 (150)
T cd01840 50 LRKTVVIGLGTNGPF---T--------------------KDQLDELLDAL-GPD-RQVYLVNPHV----P---R------ 91 (150)
T ss_pred CCCeEEEEecCCCCC---C--------------------HHHHHHHHHHc-CCC-CEEEEEECCC----C---c------
Confidence 458899999999973 1 22333444444 223 5677777652 1 0
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
.+...+|+.+++. .++++ ++.++|.++.+.. +
T Consensus 92 --------~~~~~~n~~~~~~----a~~~~--~v~~id~~~~~~~---~------------------------------- 123 (150)
T cd01840 92 --------PWEPDVNAYLLDA----AKKYK--NVTIIDWYKAAKG---H------------------------------- 123 (150)
T ss_pred --------chHHHHHHHHHHH----HHHCC--CcEEecHHHHhcc---c-------------------------------
Confidence 1235667666554 45555 5778998765532 1
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
| +++..|++||+++||+++|+.+.+
T Consensus 124 ---~-~~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 124 ---P-DWFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred ---c-hhhcCCCCCCChhhHHHHHHHHHH
Confidence 1 345679999999999999999876
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.66 E-value=2.6e-07 Score=72.07 Aligned_cols=111 Identities=19% Similarity=0.191 Sum_probs=66.6
Q ss_pred CccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCe-EEEEecCCCCCccccccccccCCC
Q 027935 12 KSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMR-KFLLAAIGPLGCMPNQLATGLAPP 90 (216)
Q Consensus 12 ~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar-~~vv~~lp~l~~~P~~~~~~~~~~ 90 (216)
-++++|.+|+||+... .. .+ .+....++...|+++.+.... +|+++..|... . .
T Consensus 56 pd~vii~~G~ND~~~~-~~---------~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~~~~~~-~-----~----- 110 (169)
T cd01831 56 PDLVVINLGTNDFSTG-NN---------PP----GEDFTNAYVEFIEELRKRYPDAPIVLMLGPMLF-G-----P----- 110 (169)
T ss_pred CCEEEEECCcCCCCCC-CC---------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEecCccc-c-----c-----
Confidence 4789999999998521 10 01 355677888888888876543 45555433321 0 0
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
... ++ +++.+.+.+++. .+.++.++|.+..+.
T Consensus 111 ---~~~-~~----~~~~~~~~~~~~----~~~~v~~id~~~~~~------------------------------------ 142 (169)
T cd01831 111 ---YGT-EE----EIKRVAEAFKDQ----KSKKVHYFDTPGILQ------------------------------------ 142 (169)
T ss_pred ---ccc-HH----HHHHHHHHHHhc----CCceEEEEecccccC------------------------------------
Confidence 000 22 223333333322 224788999764221
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+ + ++.|++||+++||++||+.+++.
T Consensus 143 ---~-~-~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 143 ---H-N-DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred ---C-C-CcCCCCCCCHHHHHHHHHHHHHH
Confidence 1 1 45799999999999999998864
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.26 E-value=5e-06 Score=66.74 Aligned_cols=139 Identities=16% Similarity=0.111 Sum_probs=95.1
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcC-CeEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLG-MRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~G-ar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
...+++|+.|+||-...- +. . ..+.-+ ++.-++|+.+.++-|...- -.+|++++-||+...-..+... .+
T Consensus 68 ~p~lvtVffGaNDs~l~~--~~--~-~~~hvP---l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~-e~ 138 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLPE--PS--S-LGQHVP---LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ-EP 138 (245)
T ss_pred CceEEEEEecCccccCCC--CC--C-CCCccC---HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc-cc
Confidence 447899999999975221 11 1 011112 4566888889998888765 3468888888887654444331 11
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
......+.|+....|++.+.+..++ .++.++|..+.+++.-
T Consensus 139 ~~~~~~RtNe~~~~Ya~ac~~la~e-------~~l~~vdlws~~Q~~~-------------------------------- 179 (245)
T KOG3035|consen 139 YVLGPERTNETVGTYAKACANLAQE-------IGLYVVDLWSKMQESD-------------------------------- 179 (245)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHH-------hCCeeeeHHhhhhhcc--------------------------------
Confidence 1223446789999999998887764 4677999988887611
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
+-.+-.|||++|.|..|++++.+.++..
T Consensus 180 ---dw~~~~ltDGLHlS~~G~~ivf~Ei~kv 207 (245)
T KOG3035|consen 180 ---DWQTSCLTDGLHLSPKGNKIVFDEILKV 207 (245)
T ss_pred ---cHHHHHhccceeeccccchhhHHHHHHH
Confidence 1122368999999999999999998874
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=98.01 E-value=7e-05 Score=60.40 Aligned_cols=24 Identities=17% Similarity=-0.002 Sum_probs=21.1
Q ss_pred eeeCCCChHHHHHHHHHHHHhcCC
Q 027935 178 LFWHAYHPSQAFNEIVARRAYSGG 201 (216)
Q Consensus 178 ~f~D~~HPT~~~h~~ia~~~~~~~ 201 (216)
+.+|++||+.+||+.||+.+.+..
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHHH
Confidence 449999999999999999998753
No 38
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.24 E-value=0.0014 Score=51.85 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=50.6
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcC-CeEEEEecCCCCCccccccccccCC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLG-MRKFLLAAIGPLGCMPNQLATGLAP 89 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~G-ar~~vv~~lp~l~~~P~~~~~~~~~ 89 (216)
+.++|++-.|.| +.. +....++...|++|.+.- -.-|++.....-. ...
T Consensus 59 ~a~~~~ld~~~N------~~~---------------~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~~--~~~------- 108 (178)
T PF14606_consen 59 DADLIVLDCGPN------MSP---------------EEFRERLDGFVKTIREAHPDTPILLVSPIPYP--AGY------- 108 (178)
T ss_dssp --SEEEEEESHH------CCT---------------TTHHHHHHHHHHHHHTT-SSS-EEEEE----T--TTT-------
T ss_pred CCCEEEEEeecC------CCH---------------HHHHHHHHHHHHHHHHhCCCCCEEEEecCCcc--ccc-------
Confidence 559999999999 111 124556667777777654 3446666633321 111
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCC
Q 027935 90 PGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~ 169 (216)
...........+|+.+++.+++++++ ..-+++++|-..++-+
T Consensus 109 ---~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~---------------------------------- 150 (178)
T PF14606_consen 109 ---FDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD---------------------------------- 150 (178)
T ss_dssp ---S--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS------------------------------------
T ss_pred ---cCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc----------------------------------
Confidence 11122345788999999999999764 3568999998766522
Q ss_pred CCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 170 PCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 170 ~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
+.-..-|++|||+.||..+|+.+..
T Consensus 151 -----d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 151 -----DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ------------------------------
T ss_pred -----ccccccccccccccccccccccccc
Confidence 0114579999999999999998765
No 39
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.74 E-value=0.013 Score=50.10 Aligned_cols=136 Identities=15% Similarity=0.101 Sum_probs=79.6
Q ss_pred hcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHc---CCeEEEEecCCCCCccccccccc
Q 027935 10 LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNL---GMRKFLLAAIGPLGCMPNQLATG 86 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~---Gar~~vv~~lp~l~~~P~~~~~~ 86 (216)
..-+.++|.+|.||........+ +-... -+...+.+.+-|++|.+. ---+++++++|++-
T Consensus 176 ~~~a~vVV~lGaND~q~~~~gd~-~~kf~-------S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r--------- 238 (354)
T COG2845 176 PKPAAVVVMLGANDRQDFKVGDV-YEKFR-------SDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR--------- 238 (354)
T ss_pred CCccEEEEEecCCCHHhcccCCe-eeecC-------chHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc---------
Confidence 35578899999999984322221 11111 123444455555555443 22358999998853
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhC-CCCCCccccCcccccccccCCccccC
Q 027935 87 LAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNN-PVFYGLSVTDRGCCGIGRNRGQITCL 165 (216)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~-p~~yGf~~~~~~C~~~g~~~~~~~c~ 165 (216)
.+.++.-...+|....+.++.+. |- ++|+++.+-+.-.+ -..+|+. .|
T Consensus 239 -------~~~l~~dm~~ln~iy~~~vE~~~----gk---~i~i~d~~v~e~G~~f~~~~~D-----------~N------ 287 (354)
T COG2845 239 -------KKKLNADMVYLNKIYSKAVEKLG----GK---FIDIWDGFVDEGGKDFVTTGVD-----------IN------ 287 (354)
T ss_pred -------ccccchHHHHHHHHHHHHHHHhC----Ce---EEEecccccccCCceeEEeccc-----------cC------
Confidence 24466778899999998888763 33 44555443221111 0011110 01
Q ss_pred CCCCCCCCCCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 166 PFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 166 ~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
..+=++.-=|++|.|.+|-+.+|.++..
T Consensus 288 ------Gq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 288 ------GQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred ------CceEEEeccCCceechhhHHHHHHHHHH
Confidence 1233445569999999999999999876
No 40
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.58 E-value=0.018 Score=50.50 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=33.8
Q ss_pred ccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 027935 13 SLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLA 71 (216)
Q Consensus 13 ~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~ 71 (216)
.|+.||||+||+= .+-... .+++..++.-.++|.++++.|.+.=-|.+|++
T Consensus 186 KLi~IfIG~ND~c-~~c~~~-------~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~l 236 (397)
T KOG3670|consen 186 KLITIFIGTNDLC-AYCEGP-------ETPPSPVDQHKRNIRKALEILRDNVPRTIVSL 236 (397)
T ss_pred EEEEEEeccchhh-hhccCC-------CCCCCchhHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4899999999986 343221 11223355567789999988887766665444
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.46 E-value=0.34 Score=38.28 Aligned_cols=128 Identities=12% Similarity=-0.015 Sum_probs=69.0
Q ss_pred ccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCc-ccc-ccccccCCC
Q 027935 13 SLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGC-MPN-QLATGLAPP 90 (216)
Q Consensus 13 ~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~-~P~-~~~~~~~~~ 90 (216)
+++.+..|--|+- ++.+ .+..++ ..-.+.+..-+++++..++. +|+.+.+|++. ... +.... .
T Consensus 52 DVIi~Ns~LWDl~--ry~~--------~~~~~Y-~~NL~~Lf~rLk~~lp~~al-lIW~tt~Pv~~~~~ggfl~~~---~ 116 (183)
T cd01842 52 DLVIMNSCLWDLS--RYQR--------NSMKTY-RENLERLFSKLDSVLPIECL-IVWNTAMPVAEEIKGGFLLPE---L 116 (183)
T ss_pred eEEEEecceeccc--ccCC--------CCHHHH-HHHHHHHHHHHHhhCCCccE-EEEecCCCCCcCCcCceeccc---c
Confidence 6788888888875 3321 122222 22233333333333356664 66666666541 111 11000 0
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCC
Q 027935 91 GKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~ 170 (216)
......+..-+..+|..=+..+. + ..|-+.|+|..|..-.
T Consensus 117 ~~~~~~lr~dv~eaN~~A~~va~----~---~~~dVlDLh~~fr~~~--------------------------------- 156 (183)
T cd01842 117 HDLSKSLRYDVLEGNFYSATLAK----C---YGFDVLDLHYHFRHAM--------------------------------- 156 (183)
T ss_pred ccccccchhHHHHHHHHHHHHHH----H---cCceeeehHHHHHhHH---------------------------------
Confidence 01122233447788855444432 2 2577899998883311
Q ss_pred CCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935 171 CFNRDQYLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 171 c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+--.|++|.++.+|+.|++.+..-
T Consensus 157 -----~~~~~DgVHwn~~a~r~ls~lll~h 181 (183)
T cd01842 157 -----QHRVRDGVHWNYVAHRRLSNLLLAH 181 (183)
T ss_pred -----hhcCCCCcCcCHHHHHHHHHHHHHh
Confidence 1122799999999999999998763
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=92.23 E-value=1.1 Score=37.34 Aligned_cols=140 Identities=12% Similarity=0.243 Sum_probs=78.9
Q ss_pred HHhcCccEEEEeccchhhhhhcCCCCCCC-----CCCCChH------hHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCC
Q 027935 8 QHLAKSLVVVNIGSNDYINNYLMPSTYSS-----SSSYNPQ------QYADLLINHYTSHIMEVYNLGMRKFLLAAIGPL 76 (216)
Q Consensus 8 ~~~~~~L~~i~iG~ND~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l 76 (216)
.+..-++++|-.|..=.+..-......+. ....++. --++++++.+...++.|....-.-=+|+++.|+
T Consensus 98 ~l~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV 177 (251)
T PF08885_consen 98 ALEEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV 177 (251)
T ss_pred HHHhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc
Confidence 34555788889999887632111000000 0111111 235667777777787777776655578888886
Q ss_pred CccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCccccccc
Q 027935 77 GCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIG 156 (216)
Q Consensus 77 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g 156 (216)
-.+-.+... + .-..|..++ ..|+..+.++.++++ ++.||=.|.++.+...
T Consensus 178 rl~~T~~~~----d---~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lr------------------ 227 (251)
T PF08885_consen 178 RLIATFRDR----D---GLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELR------------------ 227 (251)
T ss_pred hhhcccccc----c---chhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCccc------------------
Confidence 433222111 0 111122222 356777788877654 6678888866654222
Q ss_pred ccCCccccCCCCCCCCCCCCceee--CCCChHHHHHHHHHHH
Q 027935 157 RNRGQITCLPFSIPCFNRDQYLFW--HAYHPSQAFNEIVARR 196 (216)
Q Consensus 157 ~~~~~~~c~~~~~~c~~~~~y~f~--D~~HPT~~~h~~ia~~ 196 (216)
.|-|| |..|||+.+-+.+.+.
T Consensus 228 -------------------dyrfy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 228 -------------------DYRFYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred -------------------ccccccccCCCCCHHHHHHHHhh
Confidence 23333 8999999998877664
No 43
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=88.95 E-value=0.47 Score=41.52 Aligned_cols=70 Identities=16% Similarity=0.101 Sum_probs=53.1
Q ss_pred HhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccc
Q 027935 9 HLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLA 84 (216)
Q Consensus 9 ~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~ 84 (216)
..++.++.-|+|+||+...... ..+...-..+......+.+++..++.++...||+.+.|.++..|....
T Consensus 96 ~~~~~~~~~~a~gnd~A~gga~------~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVGGAR------STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cCcccccCcccccccHhhhccc------cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 3567788889999999854332 111111134566777888999999999999999999999999998775
No 44
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=88.10 E-value=7.7 Score=31.63 Aligned_cols=149 Identities=10% Similarity=0.094 Sum_probs=80.0
Q ss_pred cCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC--eEEEEecCCCCCccccccccccC
Q 027935 11 AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM--RKFLLAAIGPLGCMPNQLATGLA 88 (216)
Q Consensus 11 ~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga--r~~vv~~lp~l~~~P~~~~~~~~ 88 (216)
..++++|.+|.-+.-....... ...............+..+...+.++..... .++++.+++|.... .. .+.
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~--~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~-~~~- 173 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEW--GDNKEINPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GG-DWN- 173 (263)
T ss_pred CCCEEEEEcchhhhhcchhccc--CCCcCcchHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCcccc--cc-ccc-
Confidence 7899999999998753211100 0001112233445566667777776665554 67888887665421 11 010
Q ss_pred CCCccc-----hHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHh---CCCCCCccccCcccccccccCC
Q 027935 89 PPGKCV-----AYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILN---NPVFYGLSVTDRGCCGIGRNRG 160 (216)
Q Consensus 89 ~~~~~~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~---~p~~yGf~~~~~~C~~~g~~~~ 160 (216)
.++.|. ...+.....+|+.+...+ . .+.++.++|+...+..... ||+.|+=...
T Consensus 174 ~gg~c~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~ldi~~~~~~~r~~d~H~~~~~~~~~------------ 235 (263)
T PF13839_consen 174 SGGSCNPPRREEITNEQIDELNEALREAL----K--KNSRVHLLDIFTMLSSFRPDDAHPGIYRNQWP------------ 235 (263)
T ss_pred cCCCcCcccccCCCHHHHHHHHHHHHHHh----h--cCCCceeeeecchhhhccccccCcccccCCCC------------
Confidence 122232 122355666666666554 1 3568889999555544433 3555541100
Q ss_pred ccccCCCCCCCCCCCCceeeCCCC-hHHHHHHHHHHHHhc
Q 027935 161 QITCLPFSIPCFNRDQYLFWHAYH-PSQAFNEIVARRAYS 199 (216)
Q Consensus 161 ~~~c~~~~~~c~~~~~y~f~D~~H-PT~~~h~~ia~~~~~ 199 (216)
.-.-|++| +.+.+-....+.+++
T Consensus 236 ----------------~~~~Dc~Hw~~p~v~d~~~~lL~~ 259 (263)
T PF13839_consen 236 ----------------RQPQDCLHWCLPGVIDTWNELLLN 259 (263)
T ss_pred ----------------CCCCCCcCcCCCcHHHHHHHHHHH
Confidence 01358888 777776666665554
No 45
>PLN02757 sirohydrochlorine ferrochelatase
Probab=78.83 E-value=7 Score=30.07 Aligned_cols=63 Identities=13% Similarity=0.278 Sum_probs=39.9
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec---c
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGN---T 129 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~ 129 (216)
+...|++|.+.|+++|+|+ |.+.... .....-+.+.+++++.++|+.+|.+.. .
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G---------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~ 116 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPG---------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGL 116 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCC---------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 5566677777788887774 3444321 222445677888888889998888754 3
Q ss_pred hHHHHHHHh
Q 027935 130 YGLFTEILN 138 (216)
Q Consensus 130 ~~~~~~i~~ 138 (216)
+..+.+++.
T Consensus 117 ~p~l~~ll~ 125 (154)
T PLN02757 117 HELMVDVVN 125 (154)
T ss_pred CHHHHHHHH
Confidence 445555444
No 46
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=70.41 E-value=42 Score=25.04 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=20.9
Q ss_pred CCCceeeCCCChHHHHHHHHHHHHhc
Q 027935 174 RDQYLFWHAYHPSQAFNEIVARRAYS 199 (216)
Q Consensus 174 ~~~y~f~D~~HPT~~~h~~ia~~~~~ 199 (216)
-+.|++-|.+||..+|+-.+-+.+..
T Consensus 100 y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 100 YEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCceeeecccCchhhHHHHHHHHHH
Confidence 34689999999999999888887765
No 47
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=70.32 E-value=20 Score=31.01 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFV 125 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 125 (216)
....++.+...++++.++|.+.|+++++|+- ..+.... +. + =|.-++..+..+++.+|+.- +
T Consensus 56 ~r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~gs~--------A~---~-----~~g~v~~air~iK~~~pdl~-v 117 (322)
T PRK13384 56 SRLPESALADEIERLYALGIRYVMPFGISHH-KDAKGSD--------TW---D-----DNGLLARMVRTIKAAVPEMM-V 117 (322)
T ss_pred ceECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCccc--------cc---C-----CCChHHHHHHHHHHHCCCeE-E
Confidence 3456788999999999999999999999642 2211111 10 0 13455677777888888753 3
Q ss_pred Eecc
Q 027935 126 YGNT 129 (216)
Q Consensus 126 ~~D~ 129 (216)
+.|+
T Consensus 118 i~DV 121 (322)
T PRK13384 118 IPDI 121 (322)
T ss_pred Eeee
Confidence 4453
No 48
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=69.28 E-value=20 Score=30.96 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCC-ccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLG-CMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATF 124 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~-~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 124 (216)
....++.+...++++.++|.+.|++++++|-. .-+..... . +. |.-++..+..+++++|+. +
T Consensus 49 ~r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs~A--------~---~~-----~g~v~~air~iK~~~p~l-~ 111 (320)
T cd04823 49 FRLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGSEA--------Y---NP-----DNLVCRAIRAIKEAFPEL-G 111 (320)
T ss_pred eeeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccccc--------c---CC-----CChHHHHHHHHHHhCCCc-E
Confidence 44568889999999999999999999985421 22111110 0 00 334566777778888865 3
Q ss_pred EEecc
Q 027935 125 VYGNT 129 (216)
Q Consensus 125 ~~~D~ 129 (216)
++.|+
T Consensus 112 vi~DV 116 (320)
T cd04823 112 IITDV 116 (320)
T ss_pred EEEee
Confidence 34453
No 49
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=67.19 E-value=24 Score=30.41 Aligned_cols=67 Identities=9% Similarity=0.103 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCC-cccc-ccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLG-CMPN-QLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEAT 123 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~-~~P~-~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 123 (216)
....++.+.+.++++.++|.+.|+++++|+-. ..+. .... ..=|.-++..+..+++.+|+.-
T Consensus 46 ~r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs~a----------------~~~~g~v~~air~iK~~~pdl~ 109 (320)
T cd04824 46 NRYGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSGSAA----------------DDEDGPVIQAIKLIREEFPELL 109 (320)
T ss_pred eeeCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCccccc----------------cCCCChHHHHHHHHHHhCCCcE
Confidence 34567889999999999999999999997521 2222 1110 0113345666777777777653
Q ss_pred EEEecc
Q 027935 124 FVYGNT 129 (216)
Q Consensus 124 i~~~D~ 129 (216)
++.|+
T Consensus 110 -vi~Dv 114 (320)
T cd04824 110 -IACDV 114 (320)
T ss_pred -EEEee
Confidence 34443
No 50
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=65.58 E-value=19 Score=24.99 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGN 128 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 128 (216)
+...+++|.+.|+++++|+- .+.... ..+...+...+++++..+++.+|.+.+
T Consensus 46 ~~~~l~~l~~~g~~~v~vvP--------lfl~~G---------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 46 LAEALDELAAQGATRIVVVP--------LFLLAG---------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHHcCCCEEEEEe--------eEeCCC---------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 45567777788888877753 333321 122334556666666677888877654
No 51
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=61.53 E-value=35 Score=29.42 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFV 125 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 125 (216)
....++.+.+.++++.++|.+.|+++++|.. ..+.....+ + =|.-++..+..+++.+|+.- +
T Consensus 46 ~r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~gs~A~-----------~-----~~g~v~~air~iK~~~p~l~-v 107 (314)
T cd00384 46 YRLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIGSEAY-----------D-----PDGIVQRAIRAIKEAVPELV-V 107 (314)
T ss_pred eeeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCccccc-----------C-----CCChHHHHHHHHHHhCCCcE-E
Confidence 3456788999999999999999999999642 221111100 0 02345667777788888653 3
Q ss_pred Eecc
Q 027935 126 YGNT 129 (216)
Q Consensus 126 ~~D~ 129 (216)
..|+
T Consensus 108 i~Dv 111 (314)
T cd00384 108 ITDV 111 (314)
T ss_pred EEee
Confidence 4443
No 52
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=58.83 E-value=55 Score=26.72 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=46.7
Q ss_pred EEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchH
Q 027935 17 VNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAY 96 (216)
Q Consensus 17 i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~ 96 (216)
|+.|.+.....|- ++- ...+ +...+-+.+.++.|.+.|.|+|+++|-.- +
T Consensus 62 i~yG~s~~h~~fp-----GTi-sl~~----~t~~~~l~di~~sl~~~Gf~~ivivngHg----------------G---- 111 (237)
T PF02633_consen 62 IPYGCSPHHMGFP-----GTI-SLSP----ETLIALLRDILRSLARHGFRRIVIVNGHG----------------G---- 111 (237)
T ss_dssp B--BB-GCCTTST-----T-B-BB-H----HHHHHHHHHHHHHHHHHT--EEEEEESST----------------T----
T ss_pred CccccCcccCCCC-----CeE-EeCH----HHHHHHHHHHHHHHHHcCCCEEEEEECCH----------------h----
Confidence 4778877764321 111 1122 33444466777888899999999999211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHH
Q 027935 97 VNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEI 136 (216)
Q Consensus 97 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 136 (216)
....|...+++++.++++..+.++|.+.+....
T Consensus 112 -------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 112 -------NIAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp -------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred -------HHHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 112355566666666679999999998886554
No 53
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=58.73 E-value=10 Score=26.53 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 027935 55 SHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGN 128 (216)
Q Consensus 55 ~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 128 (216)
..+++|.+.|+++|+|+ |.+.... .....-+.+.++.++.++|+.+|.+..
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~ 91 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAP 91 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE--
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECC
Confidence 44567778888888776 3333321 122233677888888888888887755
No 54
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=54.58 E-value=14 Score=24.82 Aligned_cols=21 Identities=14% Similarity=0.145 Sum_probs=16.3
Q ss_pred HHHHHHHHHHcCCeEEEEecC
Q 027935 53 YTSHIMEVYNLGMRKFLLAAI 73 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~l 73 (216)
+...+++|.++||+.|++..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 556788999999999999865
No 55
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=53.38 E-value=58 Score=28.23 Aligned_cols=66 Identities=12% Similarity=0.241 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 027935 48 LLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYG 127 (216)
Q Consensus 48 ~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 127 (216)
..++.+.+.++++.++|.+.|+++++.+ |..+.... ..+ . .=|.-++..+..+++.+|+. ++..
T Consensus 54 ~sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g---s~a---~-----~~~g~v~~air~iK~~~pdl-~vi~ 117 (324)
T PF00490_consen 54 YSIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG---SEA---Y-----NPDGLVQRAIRAIKKAFPDL-LVIT 117 (324)
T ss_dssp EEHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS----GGG---G-----STTSHHHHHHHHHHHHSTTS-EEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch---hcc---c-----CCCChHHHHHHHHHHhCCCc-EEEE
Confidence 3578888999999999999999999843 22222210 000 0 11334567777788888875 4455
Q ss_pred cc
Q 027935 128 NT 129 (216)
Q Consensus 128 D~ 129 (216)
|+
T Consensus 118 Dv 119 (324)
T PF00490_consen 118 DV 119 (324)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 56
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=52.51 E-value=39 Score=26.62 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 027935 44 QYADLLINHYTSHIMEVYNLGMRKFLLAA 72 (216)
Q Consensus 44 ~~~~~~~~~i~~~v~~L~~~Gar~~vv~~ 72 (216)
.-+..+...|.+.|.+|++.|.+.|+.-+
T Consensus 22 ~~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 22 PKIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 34667888999999999999999877655
No 57
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=51.21 E-value=60 Score=28.15 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFV 125 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 125 (216)
....++.+.+.++++.++|.+.|++++.|.. ..+..... .+. |.-+...+..+++++|+.- +
T Consensus 54 ~r~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs~A-----------~~~-----~g~v~rair~iK~~~p~l~-v 115 (323)
T PRK09283 54 YRLSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGSEA-----------YNP-----DGLVQRAIRAIKKAFPELG-V 115 (323)
T ss_pred eeeCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccccc-----------cCC-----CCHHHHHHHHHHHhCCCcE-E
Confidence 3456788899999999999999999998432 12111111 010 3345667777788888753 3
Q ss_pred Eecc
Q 027935 126 YGNT 129 (216)
Q Consensus 126 ~~D~ 129 (216)
..|+
T Consensus 116 i~DV 119 (323)
T PRK09283 116 ITDV 119 (323)
T ss_pred EEee
Confidence 4454
No 58
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=51.09 E-value=67 Score=23.60 Aligned_cols=26 Identities=4% Similarity=0.151 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEecCCC
Q 027935 50 INHYTSHIMEVYNLGMRKFLLAAIGP 75 (216)
Q Consensus 50 ~~~i~~~v~~L~~~Gar~~vv~~lp~ 75 (216)
...+...+++|.+.|+++|+|..+--
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~Pl~l 80 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQSLHI 80 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEeCee
Confidence 45678899999999999999987543
No 59
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=50.75 E-value=47 Score=28.25 Aligned_cols=49 Identities=27% Similarity=0.489 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCC---Cc-eEEEecchHHHHHHHhCCCCCCcccc
Q 027935 94 VAYVNDMAQAFNTRLTALVDQLNSNYT---EA-TFVYGNTYGLFTEILNNPVFYGLSVT 148 (216)
Q Consensus 94 ~~~~~~~~~~~N~~L~~~l~~l~~~~~---~~-~i~~~D~~~~~~~i~~~p~~yGf~~~ 148 (216)
...+..-.+.||.+|...=.++..++. |. -+++.|.|+.|++ .||++.+
T Consensus 179 ~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 179 AAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 444556678899988887777766553 22 3788999999987 5666654
No 60
>PRK13660 hypothetical protein; Provisional
Probab=50.53 E-value=1e+02 Score=24.42 Aligned_cols=55 Identities=11% Similarity=0.257 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFV 125 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 125 (216)
+..+...|.+.|.++++.|.+.|++-+ -+| +-..-.+.+.+|+.++|+.++.
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg--alG--------------------------~d~wAaEvvl~LK~~yp~lkL~ 75 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG--QLG--------------------------VELWAAEVVLELKEEYPDLKLA 75 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC--cch--------------------------HHHHHHHHHHHHHhhCCCeEEE
Confidence 556777889999999999999877655 111 1222245666677777877765
Q ss_pred Eec
Q 027935 126 YGN 128 (216)
Q Consensus 126 ~~D 128 (216)
.+=
T Consensus 76 ~~~ 78 (182)
T PRK13660 76 VIT 78 (182)
T ss_pred EEe
Confidence 543
No 61
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=47.99 E-value=24 Score=25.03 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEecC
Q 027935 51 NHYTSHIMEVYNLGMRKFLLAAI 73 (216)
Q Consensus 51 ~~i~~~v~~L~~~Gar~~vv~~l 73 (216)
+.+...+++|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 46788899999999999999764
No 62
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=46.70 E-value=41 Score=29.00 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEecCCCC
Q 027935 45 YADLLINHYTSHIMEVYNLGMRKFLLAAIGPL 76 (216)
Q Consensus 45 ~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l 76 (216)
.....++.+...++++.++|.+.|+++++|+-
T Consensus 55 v~r~s~d~l~~~~~~~~~lGi~av~LFgvp~~ 86 (330)
T COG0113 55 VYRYSLDRLVEEAEELVDLGIPAVILFGVPDD 86 (330)
T ss_pred ceeccHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 34456888999999999999999999999873
No 63
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=44.13 E-value=79 Score=27.87 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=29.6
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCc
Q 027935 41 NPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGC 78 (216)
Q Consensus 41 ~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~ 78 (216)
+..+++.+++..+.+.++.|+++|++. |-+.=|.+..
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~-IQiDep~l~~ 196 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRY-LQLDDTVWAY 196 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCE-EEecCcchhh
Confidence 356889999999999999999999985 4455566554
No 64
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=41.91 E-value=38 Score=28.72 Aligned_cols=68 Identities=15% Similarity=0.225 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 027935 47 DLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVY 126 (216)
Q Consensus 47 ~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 126 (216)
..=+.++...+..|.+.|.|.+++.+.|+- ..+... +. .+..=|.-.-..+..++..+|+. +++
T Consensus 65 r~G~~rL~e~l~plv~~Gl~sViLfgvv~~----~~Kd~~----gs-------~Ads~~gpvi~ai~~lr~~fPdL-~i~ 128 (340)
T KOG2794|consen 65 RLGVNRLKEELAPLVAKGLRSVILFGVVPE----ALKDPT----GS-------EADSDNGPVIRAIRLLRDRFPDL-VIA 128 (340)
T ss_pred HHHHHHHHHHHHHHHHhccceEEEecCCCc----cccCcc----cc-------cccCCCCcHHHHHHHHHHhCcce-EEE
Confidence 445778999999999999999999998752 222211 00 01111233345566677788875 445
Q ss_pred ecch
Q 027935 127 GNTY 130 (216)
Q Consensus 127 ~D~~ 130 (216)
.|+-
T Consensus 129 cDVc 132 (340)
T KOG2794|consen 129 CDVC 132 (340)
T ss_pred eeee
Confidence 5543
No 65
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=37.51 E-value=86 Score=23.37 Aligned_cols=26 Identities=23% Similarity=0.253 Sum_probs=22.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhC
Q 027935 94 VAYVNDMAQAFNTRLTALVDQLNSNY 119 (216)
Q Consensus 94 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 119 (216)
.+..+.++..||+.|...|..+++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45567889999999999999999875
No 66
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=37.27 E-value=75 Score=27.17 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=14.7
Q ss_pred HHHhcCccEEEEeccchhhhhhc
Q 027935 7 QQHLAKSLVVVNIGSNDYINNYL 29 (216)
Q Consensus 7 ~~~~~~~L~~i~iG~ND~~~~~~ 29 (216)
+++... +=+++||+||+.. |.
T Consensus 192 ~~~~~~-~DF~SIGtNDLtQ-y~ 212 (293)
T PF02896_consen 192 DEFAKE-VDFFSIGTNDLTQ-YT 212 (293)
T ss_dssp HHHHTT-SSEEEEEHHHHHH-HH
T ss_pred HHHHHH-CCEEEEChhHHHH-HH
Confidence 344444 6689999999984 53
No 67
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=35.99 E-value=1.1e+02 Score=20.38 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=30.6
Q ss_pred HcCCeEEEEecCCCCCccccccccccCCCCccchHHHHH---HHHHHHHHHHHHHHHHhhCCCce-EEEec
Q 027935 62 NLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDM---AQAFNTRLTALVDQLNSNYTEAT-FVYGN 128 (216)
Q Consensus 62 ~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~---~~~~N~~L~~~l~~l~~~~~~~~-i~~~D 128 (216)
=-|||.||++.+|=....|...... ....+....+..- =...-++|+.+++.++...++.+ -.++|
T Consensus 8 ~p~arSvIv~a~~Y~~~~~~~~~~~-~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYPEPPPPPPPP-GPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCCcEEEEEEccCCCccccccccC-CCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 3589999999877443111111110 0111222222211 12223566666666677777643 33455
No 68
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=35.18 E-value=1.5e+02 Score=20.90 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=13.3
Q ss_pred HHHHHHHHHHcCCeEEEEec
Q 027935 53 YTSHIMEVYNLGMRKFLLAA 72 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~ 72 (216)
+...+++|.+.|+++++|.-
T Consensus 47 ~~~~l~~l~~~g~~~i~vvP 66 (117)
T cd03414 47 LPEALERLRALGARRVVVLP 66 (117)
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 45666667777777776653
No 69
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=33.18 E-value=1.8e+02 Score=24.85 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=30.6
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCcc
Q 027935 41 NPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCM 79 (216)
Q Consensus 41 ~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~ 79 (216)
+..+++..++..+...++.|+++|++ ++-+.=|.+...
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~ 182 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEG 182 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhcc
Confidence 45678999999999999999999995 666676665543
No 70
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=32.51 E-value=54 Score=25.03 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCC
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIGPL 76 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp~l 76 (216)
+.+.|++|.+.|+++++++.+-|-
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 567788999999999999988773
No 71
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=32.02 E-value=94 Score=19.93 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=20.7
Q ss_pred eEEEecchHHHHHHH--hCCCCCCccccC
Q 027935 123 TFVYGNTYGLFTEIL--NNPVFYGLSVTD 149 (216)
Q Consensus 123 ~i~~~D~~~~~~~i~--~~p~~yGf~~~~ 149 (216)
.+.+-++...+.... =+|..|||....
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l~ 51 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSLS 51 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSHH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcHH
Confidence 688888888888888 368999997653
No 72
>COG3741 HutG N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=31.35 E-value=68 Score=27.02 Aligned_cols=42 Identities=12% Similarity=0.230 Sum_probs=32.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHH
Q 027935 93 CVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEI 136 (216)
Q Consensus 93 ~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 136 (216)
....+..+-+-|-.+|+..|+++++.+ | ..+++|-|++=..+
T Consensus 118 ~~~Rle~~~~PYHaaL~~el~r~~a~~-G-~avLiDcHSm~s~i 159 (272)
T COG3741 118 ALARLETLWKPYHAALRRELERLRAIF-G-AAVLIDCHSMRSHI 159 (272)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhhc-C-eEEEEecccccccc
Confidence 344455677788999999999999887 4 45789999876553
No 73
>PF04311 DUF459: Protein of unknown function (DUF459); InterPro: IPR007407 This is a putative periplasmic protein.
Probab=31.19 E-value=1.4e+02 Score=26.12 Aligned_cols=24 Identities=13% Similarity=-0.039 Sum_probs=14.3
Q ss_pred ceeeCCCChHHHHHHHHHHHHhcC
Q 027935 177 YLFWHAYHPSQAFNEIVARRAYSG 200 (216)
Q Consensus 177 y~f~D~~HPT~~~h~~ia~~~~~~ 200 (216)
.+=-|+.|.|.+|-++++..+..+
T Consensus 296 ~~~sdg~h~t~~G~~~~~~~~~~g 319 (327)
T PF04311_consen 296 LRDSDGIHLTVEGEKYLMPEAPPG 319 (327)
T ss_pred cccCCcceEEeeccccccccCCch
Confidence 344566777777766665555544
No 74
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=31.11 E-value=1.3e+02 Score=21.97 Aligned_cols=26 Identities=19% Similarity=0.164 Sum_probs=22.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhC
Q 027935 94 VAYVNDMAQAFNTRLTALVDQLNSNY 119 (216)
Q Consensus 94 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 119 (216)
.+..+.++..||+.|...|..+++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34556889999999999999999876
No 75
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=30.85 E-value=1.8e+02 Score=23.30 Aligned_cols=53 Identities=6% Similarity=0.012 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 027935 49 LINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGN 128 (216)
Q Consensus 49 ~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 128 (216)
.-..+...++.|.+.|+++|.+..+-. . ...++++.+.+|+++|+..-
T Consensus 134 TG~Tl~~ai~~L~~~G~~~I~v~~ll~---------~-----------------------~~gl~~l~~~~p~v~i~~~~ 181 (207)
T TIGR01091 134 TGGTMIAALDLLKKRGAKKIKVLSIVA---------A-----------------------PEGIEAVEKAHPDVDIYTAA 181 (207)
T ss_pred chHHHHHHHHHHHHcCCCEEEEEEEec---------C-----------------------HHHHHHHHHHCCCCEEEEEE
Confidence 455788899999999999998888611 0 23455566788999988875
Q ss_pred chHHH
Q 027935 129 TYGLF 133 (216)
Q Consensus 129 ~~~~~ 133 (216)
+..-+
T Consensus 182 id~~l 186 (207)
T TIGR01091 182 IDEKL 186 (207)
T ss_pred ECCCc
Confidence 55433
No 76
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=30.53 E-value=19 Score=22.98 Aligned_cols=8 Identities=38% Similarity=1.439 Sum_probs=6.9
Q ss_pred eeCCCChH
Q 027935 179 FWHAYHPS 186 (216)
Q Consensus 179 f~D~~HPT 186 (216)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 69999995
No 77
>PRK06233 hypothetical protein; Provisional
Probab=30.15 E-value=2e+02 Score=25.30 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.3
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCc
Q 027935 41 NPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGC 78 (216)
Q Consensus 41 ~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~ 78 (216)
+..+++.+++..+.+.++.|+++|++. |=+.=|.+..
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~-IQiDeP~~~~ 197 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARY-IQLDDTTWAY 197 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEcCCCHHh
Confidence 357889999999999999999999985 4445566543
No 78
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=30.00 E-value=1e+02 Score=27.13 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=47.0
Q ss_pred CccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCC-eEEEEecCCCCCcccccccc
Q 027935 12 KSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGM-RKFLLAAIGPLGCMPNQLAT 85 (216)
Q Consensus 12 ~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Ga-r~~vv~~lp~l~~~P~~~~~ 85 (216)
-.+|.|..|+-|-..+-. ..-...+..+-+.|++.++.|.+.|. .+++|+.+..+|++|.....
T Consensus 246 ~~v~~V~~gGwDTH~~~~----------~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~~N~~ 310 (392)
T PF07394_consen 246 VRVVFVSLGGWDTHSNQG----------NRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPRENGS 310 (392)
T ss_pred CEEEEECCCCccCccccH----------hHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcccCCC
Confidence 357888888877653211 11245667788888888888888877 57999999999999987654
No 79
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=29.20 E-value=1.7e+02 Score=25.69 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHH
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGL 132 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~ 132 (216)
+.+.++.|.+.+..-+.++++-.|.++|..+....-+-+...+........|.+. +++.-.+...+++++|+..-
T Consensus 90 lr~~~~~l~~~~l~~~~iPgVi~LptVP~~RK~N~IDmGTaDKva~a~lai~~~~-----~~~gi~y~~~nfIlvEiG~~ 164 (343)
T PF07318_consen 90 LRKLVRELAESNLPAYFIPGVIHLPTVPAWRKINRIDMGTADKVASAALAIYDQA-----EREGIEYREVNFILVEIGSG 164 (343)
T ss_pred HHHHHHHHHhCCCCEEEeCceeccCCCchHhhhcccccCcHhHHHHHHHHHHhhH-----HhhCCCcccceEEEEEccCC
Confidence 6677777878888889999999999999888765333233333333333333332 22223355678999998754
Q ss_pred HH
Q 027935 133 FT 134 (216)
Q Consensus 133 ~~ 134 (216)
+.
T Consensus 165 yt 166 (343)
T PF07318_consen 165 YT 166 (343)
T ss_pred ce
Confidence 43
No 80
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
Probab=28.83 E-value=27 Score=32.63 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=17.3
Q ss_pred HHHHhcCccEEEEeccchhhhhhc
Q 027935 6 LQQHLAKSLVVVNIGSNDYINNYL 29 (216)
Q Consensus 6 ~~~~~~~~L~~i~iG~ND~~~~~~ 29 (216)
+...+.+-+=+++||+||+. .|.
T Consensus 439 ~a~~lakevDFfSIGTNDLt-QYt 461 (574)
T COG1080 439 IADQLAKEVDFFSIGTNDLT-QYT 461 (574)
T ss_pred HHHHHHHhCCEeeecccHHH-HHH
Confidence 44555666778999999998 564
No 81
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=27.56 E-value=73 Score=22.57 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCeEEEEecCC
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIG 74 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp 74 (216)
+...+++|.+.|+++|++.-+-
T Consensus 44 i~~~l~~l~~~G~~~i~lvPl~ 65 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLMPLM 65 (103)
T ss_pred HHHHHHHHHHcCCCEEEEEehh
Confidence 4667788899999998876543
No 82
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=27.54 E-value=1.9e+02 Score=25.21 Aligned_cols=36 Identities=8% Similarity=-0.011 Sum_probs=28.6
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCC
Q 027935 41 NPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLG 77 (216)
Q Consensus 41 ~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~ 77 (216)
+..+++.+++..+...++.|+++|++.| =+.=|.+.
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~I-QiDeP~l~ 181 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDII-QFDEPAFN 181 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEE-EecccHHh
Confidence 4568889999999999999999999854 44445554
No 83
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=27.18 E-value=91 Score=21.20 Aligned_cols=24 Identities=17% Similarity=0.410 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCC
Q 027935 53 YTSHIMEVYNLGMRKFLLAAIGPL 76 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~lp~l 76 (216)
+...++.|.+.|.++|+|+-+-+.
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~~ 70 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAPV 70 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCccc
Confidence 446677888999999988876664
No 84
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2.1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B.
Probab=26.69 E-value=53 Score=27.74 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccc
Q 027935 99 DMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGR 157 (216)
Q Consensus 99 ~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~ 157 (216)
.+.+.|...|......-++ ..|.-+.--.+-.++.+++. |. .-..+.|||||+|.
T Consensus 5 ~~g~~yE~~l~~~~~~~~k-~~G~~~TP~~i~~l~~~~~~-~~--~~~~VlDPacGsG~ 59 (311)
T PF02384_consen 5 ILGDLYEYFLKKFAKESRK-KLGQFYTPREIVDLMVKLLN-PK--KGDSVLDPACGSGG 59 (311)
T ss_dssp HHHHHHHHHHHHHHHCTTT-SCGGC---HHHHHHHHHHHT-T---TTEEEEETT-TTSH
T ss_pred HHHHHHHHHHHHHHHHhcc-ccceeehHHHHHHHHHhhhh-cc--ccceeechhhhHHH
Confidence 3556666666655432222 23555566667777777773 21 22346799999975
No 85
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=25.94 E-value=35 Score=32.23 Aligned_cols=19 Identities=47% Similarity=0.777 Sum_probs=14.3
Q ss_pred hcCccEEEEeccchhhhhhc
Q 027935 10 LAKSLVVVNIGSNDYINNYL 29 (216)
Q Consensus 10 ~~~~L~~i~iG~ND~~~~~~ 29 (216)
+-+.+=+|++|+||++ .|.
T Consensus 616 L~~~vDFvSVGtNDL~-Qyl 634 (756)
T COG3605 616 LAKRVDFVSVGTNDLT-QYL 634 (756)
T ss_pred HHhhCCEEEecchHHH-HHH
Confidence 3455668999999998 464
No 86
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.68 E-value=1e+02 Score=27.56 Aligned_cols=47 Identities=21% Similarity=0.503 Sum_probs=30.6
Q ss_pred HHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecch
Q 027935 59 EVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTY 130 (216)
Q Consensus 59 ~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 130 (216)
.+++.|+.++ ..+-|+||.|..... +.++..+++++|++++.-+|..
T Consensus 327 e~i~~g~~nv--IclqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNV--ICLQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCce--EEecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 5567777754 456799999955432 2344556667777777777654
No 87
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=24.27 E-value=86 Score=23.14 Aligned_cols=20 Identities=15% Similarity=0.381 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHcCCeEEEEe
Q 027935 52 HYTSHIMEVYNLGMRKFLLA 71 (216)
Q Consensus 52 ~i~~~v~~L~~~Gar~~vv~ 71 (216)
.+...|++|.+.|+++|+|+
T Consensus 45 ~l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 45 NWRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred CHHHHHHHHHHCCCCEEEEe
Confidence 46778889999999999988
No 88
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=23.31 E-value=2.9e+02 Score=22.05 Aligned_cols=50 Identities=8% Similarity=0.033 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Q 027935 49 LINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGN 128 (216)
Q Consensus 49 ~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 128 (216)
.-..+...++.|.+.|+++|.+..+ +. . ...++++.+++|+++|+..-
T Consensus 136 TG~Tl~~ai~~L~~~G~~~I~~~~l--l~------~------------------------~~gl~~l~~~~p~v~i~~~~ 183 (209)
T PRK00129 136 TGGSAIAAIDLLKKRGAKNIKVLCL--VA------A------------------------PEGIKALEEAHPDVEIYTAA 183 (209)
T ss_pred chHHHHHHHHHHHHcCCCEEEEEEE--ec------C------------------------HHHHHHHHHHCCCcEEEEEe
Confidence 4557888999999999999988886 11 0 23455667788999987754
Q ss_pred ch
Q 027935 129 TY 130 (216)
Q Consensus 129 ~~ 130 (216)
+.
T Consensus 184 iD 185 (209)
T PRK00129 184 ID 185 (209)
T ss_pred ec
Confidence 44
No 89
>PRK05800 cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated
Probab=22.75 E-value=3.2e+02 Score=21.01 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCCcccccc
Q 027935 51 NHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQL 83 (216)
Q Consensus 51 ~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~ 83 (216)
..+.+.++.|.+.|..-|+|.+-.-.|-+|...
T Consensus 103 ~~l~~li~~L~~~~~tvVlVs~Evg~g~vp~~~ 135 (170)
T PRK05800 103 AEIDALLAALQQLPAKIILVTNEVGMGIVPEYR 135 (170)
T ss_pred HHHHHHHHHHHcCCCCEEEEEcCCcccccCCCH
Confidence 344556667777899889999988888777543
No 90
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=22.58 E-value=3.2e+02 Score=20.20 Aligned_cols=20 Identities=10% Similarity=0.262 Sum_probs=15.4
Q ss_pred HHHHHHHHHHcCCeEEEEec
Q 027935 53 YTSHIMEVYNLGMRKFLLAA 72 (216)
Q Consensus 53 i~~~v~~L~~~Gar~~vv~~ 72 (216)
+.+.|++|.+.|+++|+|.-
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p 98 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVP 98 (135)
T ss_pred HHHHHHHHHHcCCCeEEEEC
Confidence 34567778888999988876
No 91
>PF13259 DUF4050: Protein of unknown function (DUF4050)
Probab=22.32 E-value=91 Score=22.87 Aligned_cols=29 Identities=7% Similarity=0.006 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhcCCCCCcCCCChHHhhc
Q 027935 187 QAFNEIVARRAYSGGSSDCYPMNVKQMAL 215 (216)
Q Consensus 187 ~~~h~~ia~~~~~~~~~~~~p~~~~~~~~ 215 (216)
...|-.+-+.+......+-.|+||++|+.
T Consensus 81 ~~~y~~iY~~Lv~~~~pf~~PI~L~dmv~ 109 (122)
T PF13259_consen 81 PISYPAIYEKLVGSNKPFKQPIPLSDMVD 109 (122)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 44555666777777777889999999985
No 92
>COG4053 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.24 E-value=4.2e+02 Score=21.37 Aligned_cols=26 Identities=19% Similarity=0.001 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEecC
Q 027935 48 LLINHYTSHIMEVYNLGMRKFLLAAI 73 (216)
Q Consensus 48 ~~~~~i~~~v~~L~~~Gar~~vv~~l 73 (216)
.+...+.+.|+.|...++-+..+.++
T Consensus 23 ~l~~~ve~~ik~ll~~~~~~a~l~ni 48 (244)
T COG4053 23 KLNELVEKEIKKLLSKLGIKATLSNI 48 (244)
T ss_pred HHHHHHHHHHHHHHHhhcceeEeccc
Confidence 45666777788888777766666554
No 93
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.81 E-value=4e+02 Score=20.98 Aligned_cols=55 Identities=15% Similarity=0.273 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEE
Q 027935 46 ADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFV 125 (216)
Q Consensus 46 ~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 125 (216)
+..+.+.|.+.|..|++.|.+-+++.| .|| +-..-...+..|+..||+.++.
T Consensus 24 ~~~IKkai~~~l~~lleeGleW~litG--qLG--------------------------~E~WA~Evv~eLk~eyp~ik~a 75 (180)
T COG4474 24 VSYIKKAIKKKLEALLEEGLEWVLITG--QLG--------------------------FELWAAEVVIELKEEYPHIKLA 75 (180)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEec--ccc--------------------------HHHHHHHHHHHHHhhCCCeeEE
Confidence 567888999999999999999999888 443 1122244556677788877766
Q ss_pred Eec
Q 027935 126 YGN 128 (216)
Q Consensus 126 ~~D 128 (216)
+.-
T Consensus 76 vit 78 (180)
T COG4474 76 VIT 78 (180)
T ss_pred EEe
Confidence 553
No 94
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=21.47 E-value=2.5e+02 Score=22.45 Aligned_cols=48 Identities=6% Similarity=0.118 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHcCC--eEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Q 027935 50 INHYTSHIMEVYNLGM--RKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYG 127 (216)
Q Consensus 50 ~~~i~~~v~~L~~~Ga--r~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 127 (216)
-..+...|+.|.+.|+ ++|+++++-- . .++++++.+++|+++|+..
T Consensus 134 G~s~~~ai~~L~~~G~~~~~I~~v~~ia---------s-----------------------~~Gl~~l~~~~P~v~I~ta 181 (207)
T PF14681_consen 134 GGSAIAAIEILKEHGVPEENIIIVSVIA---------S-----------------------PEGLERLLKAFPDVRIYTA 181 (207)
T ss_dssp SHHHHHHHHHHHHTTG-GGEEEEEEEEE---------E-----------------------HHHHHHHHHHSTTSEEEEE
T ss_pred hhhHHHHHHHHHHcCCCcceEEEEEEEe---------c-----------------------HHHHHHHHHhCCCeEEEEE
Confidence 3456788889999887 7898888411 0 3477778888999998876
Q ss_pred cc
Q 027935 128 NT 129 (216)
Q Consensus 128 D~ 129 (216)
-+
T Consensus 182 ~i 183 (207)
T PF14681_consen 182 AI 183 (207)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 95
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=20.95 E-value=2.5e+02 Score=20.25 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhC
Q 027935 95 AYVNDMAQAFNTRLTALVDQLNSNY 119 (216)
Q Consensus 95 ~~~~~~~~~~N~~L~~~l~~l~~~~ 119 (216)
+.....+..||+.|...+.++++++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4456789999999999999998864
No 96
>PF09035 Tn916-Xis: Excisionase from transposon Tn916; InterPro: IPR015122 The phage-encoded excisionase protein Tn916-Xis adopts a winged-helix structure that consists of a three-stranded anti-parallel beta-sheet that packs against a helix-turn-helix (HTH) motif and a third C-terminal alpha-helix. It is encoded for by Tn916, which also codes for the integrase Tn916-Int. The protein interacts with DNA by the insertion of helix alpha-2 into the major groove and the contact of the hairpin that connects strands beta-2 and beta-3 with the adjacent phosphodiester backbone and/or minor groove. Tn916-Xis stimulates phage excision and inhibits viral integration by stabilising distorted DNA structures []. ; PDB: 1Y6U_A.
Probab=20.14 E-value=98 Score=20.30 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=16.0
Q ss_pred CChHHHHHHh---cCccEEEEeccc
Q 027935 1 MDERKLQQHL---AKSLVVVNIGSN 22 (216)
Q Consensus 1 ~g~~~~~~~~---~~~L~~i~iG~N 22 (216)
||.++.++.. ++.=|++|+|.=
T Consensus 25 IG~~klr~l~~~~~~~~f~~~~G~r 49 (67)
T PF09035_consen 25 IGEKKLRELAEENPDCPFVLWIGNR 49 (67)
T ss_dssp S-HHHHHHHHHH-TT-SSEEEETTE
T ss_pred ccHHHHHHHHHhCCCCCEEEEECCE
Confidence 6888888887 667789999963
No 97
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=20.09 E-value=4.6e+02 Score=26.30 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=51.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 027935 43 QQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEA 122 (216)
Q Consensus 43 ~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 122 (216)
...++..++.++..|++-.+.|++ ||-.+.|. .|.++...+- ++... -+..-..|.+.++.|.+.||
T Consensus 800 ~~~~~~~~~~l~~~i~~~~~~~~~--~ig~~~p~--~p~y~~t~~f---g~~g~----~rs~a~~~~~~~~~~~~~y~-- 866 (912)
T TIGR02171 800 QQIINENMNSLKAFIDETAKKGVK--VIGTIFPQ--SPGYKNTGSF---GRYGP----RRSIAKKIIDSFKKMEKTYP-- 866 (912)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCE--EEEEECCC--CCCccccCcc---cccCc----chhhHHHHHHHHHHHHhhCC--
Confidence 456777888899999988889986 44444553 4888775421 12111 12333566777788888888
Q ss_pred eEEEecchHH
Q 027935 123 TFVYGNTYGL 132 (216)
Q Consensus 123 ~i~~~D~~~~ 132 (216)
+++++|=+++
T Consensus 867 ~f~~~denk~ 876 (912)
T TIGR02171 867 HFILFDENKD 876 (912)
T ss_pred ceEEEecCcC
Confidence 6789997744
Done!