Query 027936
Match_columns 216
No_of_seqs 187 out of 1108
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 05:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 3.7E-15 1.2E-19 103.1 8.8 67 26-94 1-67 (68)
2 1cc8_A Protein (metallochapero 99.5 9.2E-14 3.2E-18 96.4 9.3 67 26-93 4-71 (73)
3 4a4j_A Pacszia, cation-transpo 99.5 3.1E-13 1.1E-17 92.1 9.4 65 27-92 2-69 (69)
4 3fry_A Probable copper-exporti 99.4 4.4E-13 1.5E-17 93.5 8.1 68 24-94 2-70 (73)
5 3dxs_X Copper-transporting ATP 99.4 4.4E-13 1.5E-17 92.7 7.7 67 26-93 1-71 (74)
6 2crl_A Copper chaperone for su 99.4 1.6E-12 5.5E-17 97.0 9.6 71 25-96 17-87 (98)
7 2roe_A Heavy metal binding pro 99.3 4E-12 1.4E-16 85.4 7.1 63 29-92 2-65 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.3 3.7E-12 1.3E-16 83.6 6.0 61 28-89 2-63 (64)
9 2l3m_A Copper-ION-binding prot 99.3 2.7E-11 9.1E-16 81.4 8.7 64 25-89 3-70 (71)
10 2xmw_A PACS-N, cation-transpor 99.3 3.7E-11 1.3E-15 80.2 9.3 66 26-92 2-70 (71)
11 1aw0_A Menkes copper-transport 99.2 6E-11 2.1E-15 79.6 8.8 65 27-92 3-71 (72)
12 1osd_A MERP, hypothetical prot 99.2 6.1E-11 2.1E-15 79.6 8.5 66 26-92 2-71 (72)
13 1mwy_A ZNTA; open-faced beta-s 99.2 1.4E-10 4.7E-15 79.0 9.8 66 26-92 2-69 (73)
14 2g9o_A Copper-transporting ATP 99.2 7.6E-11 2.6E-15 85.5 8.9 70 27-97 3-79 (90)
15 2qif_A Copper chaperone COPZ; 99.2 1.1E-10 3.9E-15 76.4 8.9 63 26-89 1-67 (69)
16 3cjk_B Copper-transporting ATP 99.2 1.6E-10 5.4E-15 78.7 9.8 65 27-92 2-70 (75)
17 2k2p_A Uncharacterized protein 99.2 3E-11 1E-15 87.7 6.2 65 24-89 19-84 (85)
18 1fvq_A Copper-transporting ATP 99.2 7.7E-11 2.6E-15 79.1 7.7 66 27-93 2-70 (72)
19 1cpz_A Protein (COPZ); copper 99.2 1E-10 3.6E-15 77.4 8.3 63 29-92 2-68 (68)
20 1q8l_A Copper-transporting ATP 99.2 7.9E-11 2.7E-15 83.3 8.1 70 25-95 7-80 (84)
21 1kvi_A Copper-transporting ATP 99.2 1.1E-10 3.7E-15 80.5 8.5 68 25-93 6-77 (79)
22 1opz_A Potential copper-transp 99.2 1.2E-10 4.1E-15 78.5 8.1 67 25-92 4-74 (76)
23 1y3j_A Copper-transporting ATP 99.2 6.7E-11 2.3E-15 81.4 7.0 67 26-93 2-72 (77)
24 2ldi_A Zinc-transporting ATPas 99.1 1.1E-10 3.7E-15 77.3 7.1 64 26-90 2-69 (71)
25 2kt2_A Mercuric reductase; nme 99.1 1.2E-10 4E-15 78.0 7.3 63 29-92 2-67 (69)
26 2kyz_A Heavy metal binding pro 99.1 7.2E-11 2.5E-15 79.6 5.9 62 28-92 2-64 (67)
27 1yg0_A COP associated protein; 99.1 1.5E-10 5.2E-15 76.2 6.6 61 28-89 2-65 (66)
28 1jww_A Potential copper-transp 99.1 3.5E-10 1.2E-14 77.5 8.1 67 26-93 2-72 (80)
29 1qup_A Superoxide dismutase 1 99.1 2.6E-10 8.9E-15 97.7 9.1 70 26-96 5-74 (222)
30 1yjr_A Copper-transporting ATP 99.1 2.9E-10 1E-14 76.8 7.3 65 27-92 4-72 (75)
31 2ofg_X Zinc-transporting ATPas 99.0 7.9E-10 2.7E-14 83.4 9.1 67 25-92 6-76 (111)
32 2kkh_A Putative heavy metal tr 99.0 1.3E-09 4.5E-14 78.9 9.9 70 24-94 13-86 (95)
33 1p6t_A Potential copper-transp 99.0 5.1E-10 1.7E-14 86.2 7.7 69 26-95 73-145 (151)
34 2ew9_A Copper-transporting ATP 99.0 8.4E-10 2.9E-14 84.4 8.5 66 26-92 79-148 (149)
35 1jk9_B CCS, copper chaperone f 99.0 8.6E-10 2.9E-14 96.2 8.1 68 26-94 6-73 (249)
36 2aj0_A Probable cadmium-transp 98.9 9.1E-10 3.1E-14 74.7 5.0 58 27-89 3-61 (71)
37 2rop_A Copper-transporting ATP 98.9 5.5E-09 1.9E-13 85.5 9.0 67 27-94 122-192 (202)
38 2ew9_A Copper-transporting ATP 98.9 9.3E-09 3.2E-13 78.5 8.8 67 26-93 3-73 (149)
39 2rop_A Copper-transporting ATP 98.6 9.1E-08 3.1E-12 78.2 8.0 66 25-91 18-90 (202)
40 1p6t_A Potential copper-transp 98.5 2.4E-07 8.2E-12 71.1 7.6 64 25-89 4-71 (151)
41 3j09_A COPA, copper-exporting 98.4 7.4E-07 2.5E-11 87.3 8.4 63 27-90 2-68 (723)
42 3bpd_A Uncharacterized protein 89.7 1.1 3.7E-05 34.1 6.8 67 25-93 5-80 (100)
43 2raq_A Conserved protein MTH88 89.6 1.2 4.2E-05 33.7 7.1 68 24-93 4-80 (97)
44 2x3d_A SSO6206; unknown functi 89.3 1.5 5E-05 33.2 7.2 67 25-93 3-79 (96)
45 3lno_A Putative uncharacterize 81.9 1.1 3.9E-05 33.4 3.5 35 28-62 45-86 (108)
46 3cq1_A Putative uncharacterize 81.9 1.2 4.1E-05 32.8 3.5 35 28-62 42-82 (103)
47 1uwd_A Hypothetical protein TM 79.5 1.2 4.1E-05 32.8 2.8 35 28-62 43-83 (103)
48 2jsx_A Protein NAPD; TAT, proo 64.8 18 0.00062 26.6 6.3 45 38-82 16-61 (95)
49 1t1v_A SH3BGRL3, SH3 domain-bi 59.8 14 0.00047 25.7 4.6 49 27-86 2-55 (93)
50 2k1h_A Uncharacterized protein 52.6 29 0.00098 25.6 5.5 38 43-82 40-79 (94)
51 3lvj_C Sulfurtransferase TUSA; 45.5 59 0.002 22.6 6.0 54 29-92 11-67 (82)
52 2cpq_A FragIle X mental retard 44.2 59 0.002 23.8 6.0 66 22-90 10-80 (91)
53 2nyt_A Probable C->U-editing e 43.4 22 0.00075 29.3 4.0 60 28-93 84-146 (190)
54 1jdq_A TM006 protein, hypothet 43.3 66 0.0023 23.4 6.2 54 29-92 27-83 (98)
55 3hz7_A Uncharacterized protein 40.2 37 0.0013 24.2 4.3 51 31-92 4-59 (87)
56 1pqx_A Conserved hypothetical 39.1 26 0.00089 25.7 3.4 40 42-83 39-80 (91)
57 4gwb_A Peptide methionine sulf 38.0 48 0.0017 27.0 5.2 45 38-82 9-71 (168)
58 2ko1_A CTR148A, GTP pyrophosph 36.7 64 0.0022 21.4 5.0 34 26-59 44-77 (88)
59 1dtj_A RNA-binding neurooncolo 34.0 1E+02 0.0035 20.6 5.7 52 27-81 3-66 (76)
60 1fvg_A Peptide methionine sulf 33.6 56 0.0019 27.4 4.9 45 38-82 50-116 (199)
61 2yy3_A Elongation factor 1-bet 32.1 67 0.0023 23.5 4.6 35 26-60 50-86 (91)
62 3bqh_A PILB, peptide methionin 30.8 67 0.0023 26.7 5.0 45 38-82 9-75 (193)
63 2ct6_A SH3 domain-binding glut 29.5 66 0.0022 23.2 4.3 47 28-85 9-60 (111)
64 2khp_A Glutaredoxin; thioredox 29.4 73 0.0025 21.2 4.3 35 26-62 5-39 (92)
65 3ctg_A Glutaredoxin-2; reduced 28.2 1.2E+02 0.0042 22.4 5.7 52 28-87 38-92 (129)
66 2p2r_A Poly(RC)-binding protei 26.4 1.1E+02 0.0036 20.6 4.7 52 26-80 4-64 (76)
67 1nwa_A Peptide methionine sulf 26.3 86 0.0029 26.3 4.9 45 38-82 32-94 (203)
68 2fwh_A Thiol:disulfide interch 26.1 1.4E+02 0.0048 21.3 5.6 34 29-62 34-74 (134)
69 1ff3_A Peptide methionine sulf 25.8 90 0.0031 26.3 4.9 46 37-82 48-115 (211)
70 2hh2_A KH-type splicing regula 25.6 67 0.0023 23.5 3.7 50 28-81 8-70 (107)
71 2jsx_A Protein NAPD; TAT, proo 24.5 1.3E+02 0.0043 21.9 5.0 35 27-61 42-76 (95)
72 2j89_A Methionine sulfoxide re 24.1 98 0.0033 27.0 4.9 53 25-82 93-167 (261)
73 1je3_A EC005, hypothetical 8.6 24.0 1.2E+02 0.0041 22.0 4.8 55 28-92 27-84 (97)
74 1j5k_A Heterogeneous nuclear r 23.8 1.8E+02 0.0061 20.2 5.6 46 25-71 12-66 (89)
75 1r7h_A NRDH-redoxin; thioredox 23.7 1E+02 0.0035 19.3 4.0 32 29-62 3-34 (75)
76 3h8q_A Thioredoxin reductase 3 23.6 1.5E+02 0.005 21.1 5.2 51 28-87 18-68 (114)
77 2hiy_A Hypothetical protein; C 23.4 1.2E+02 0.0041 24.4 5.2 49 42-91 25-77 (183)
78 2gjh_A Designed protein; oblig 23.3 1.4E+02 0.0048 20.0 4.5 35 38-73 17-51 (62)
79 2wci_A Glutaredoxin-4; redox-a 22.8 1.2E+02 0.0042 22.9 4.9 41 35-87 48-88 (135)
80 2kgs_A Uncharacterized protein 21.7 30 0.001 26.5 1.1 23 56-78 78-100 (132)
81 2y3m_A Emhofq, protein transpo 21.4 1.5E+02 0.0051 22.8 5.2 59 25-87 104-168 (175)
82 2qip_A Protein of unknown func 21.3 37 0.0013 26.4 1.6 32 64-95 111-142 (165)
83 3v4k_A DNA DC->DU-editing enzy 21.2 1.9E+02 0.0066 24.1 6.1 63 27-94 100-163 (203)
84 3l4n_A Monothiol glutaredoxin- 20.9 1.3E+02 0.0044 22.5 4.6 53 27-87 14-68 (127)
85 1aba_A Glutaredoxin; electron 20.8 1.5E+02 0.0052 19.7 4.6 46 36-88 13-58 (87)
86 3gzb_A Putative snoal-like pol 20.6 65 0.0022 25.8 2.8 34 49-82 118-152 (154)
87 3e0m_A Peptide methionine sulf 20.4 1.2E+02 0.0041 27.1 4.9 46 37-82 8-73 (313)
88 3rdw_A Putative arsenate reduc 20.2 1.4E+02 0.0048 22.1 4.6 54 27-89 5-59 (121)
89 2wem_A Glutaredoxin-related pr 20.1 1.9E+02 0.0065 21.2 5.4 40 36-87 34-74 (118)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.60 E-value=3.7e-15 Score=103.06 Aligned_cols=67 Identities=21% Similarity=0.397 Sum_probs=63.2
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p 94 (216)
|.+++|+|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|++.++++.|+++|+ ++||.+.++++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence 45788999999999999999999999999 999999999999999999999999999 99999999875
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.51 E-value=9.2e-14 Score=96.38 Aligned_cols=67 Identities=22% Similarity=0.386 Sum_probs=63.3
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCC-CccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcC
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~-GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
+.+++|+|.|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+.+++..|++.|+ ++||.+.++.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence 567899999999999999999999999 999999999999999999899999999999 9999998764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.47 E-value=3.1e-13 Score=92.09 Aligned_cols=65 Identities=22% Similarity=0.399 Sum_probs=60.9
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--ecCCHHHHHHHHHhccCCcEEEc
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~--G~vd~~~L~~~L~kk~G~~veiV 92 (216)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|. +.+++..|++.|+ ++||.++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 57899996 99999999999999999999999999999999998 6799999999999 999998864
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.43 E-value=4.4e-13 Score=93.48 Aligned_cols=68 Identities=21% Similarity=0.419 Sum_probs=63.5
Q ss_pred CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936 24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p 94 (216)
+.+.+++|.|. |+|.+|+.+|+++|.+ +||..+.+|+.+++++|+.. ++..|+++|+ ++||.+.++++
T Consensus 2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~ 70 (73)
T 3fry_A 2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS 70 (73)
T ss_dssp CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence 35788999996 9999999999999999 99999999999999999988 9999999999 99999998764
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.42 E-value=4.4e-13 Score=92.73 Aligned_cols=67 Identities=9% Similarity=0.235 Sum_probs=61.8
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
|.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|+++|+ ++||.++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence 468899996 999999999999999999999999999999999974 379999999999 9999998874
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=96.97 Aligned_cols=71 Identities=18% Similarity=0.387 Sum_probs=65.5
Q ss_pred CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936 25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK 96 (216)
Q Consensus 25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k 96 (216)
.+.+++|+|.|+|.+|+.+|+++|.+++||.+|.+|+.+++++|.+.+++..|++.|+ ++||.+.++....
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS 87 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence 4567889999999999999999999999999999999999999999899999999999 9999999876544
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.32 E-value=4e-12 Score=85.40 Aligned_cols=63 Identities=30% Similarity=0.492 Sum_probs=58.4
Q ss_pred EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936 29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV 92 (216)
++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|.+.|+ ++||.+..+
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence 468896 999999999999999999999999999999999987789999999999 999988765
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.30 E-value=3.7e-12 Score=83.60 Aligned_cols=61 Identities=20% Similarity=0.366 Sum_probs=56.8
Q ss_pred EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v 89 (216)
+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.++...|.+.|+ ++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 4678995 999999999999999999999999999999999998889999999999 899865
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.26 E-value=2.7e-11 Score=81.40 Aligned_cols=64 Identities=19% Similarity=0.432 Sum_probs=58.0
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v 89 (216)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|++.|. .+||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence 4678899996 999999999999999999999999999999999973 478899999999 899865
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.26 E-value=3.7e-11 Score=80.24 Aligned_cols=66 Identities=20% Similarity=0.341 Sum_probs=58.3
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEEc
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~veiV 92 (216)
+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|+..|. .+||.+.++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~ 70 (71)
T 2xmw_A 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 70 (71)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence 467889996 9999999999999999999999999999999999743 67889999999 899987653
No 11
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.22 E-value=6e-11 Score=79.64 Aligned_cols=65 Identities=18% Similarity=0.344 Sum_probs=58.5
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV 92 (216)
++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|++.|. .+||.+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 46789996 9999999999999999999999999999999999754 67899999999 899987764
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.21 E-value=6.1e-11 Score=79.60 Aligned_cols=66 Identities=24% Similarity=0.295 Sum_probs=59.1
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV 92 (216)
+.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.. .++...|+..|. .+||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 457889996 999999999999999999999999999999999974 368899999999 999987654
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.20 E-value=1.4e-10 Score=79.04 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=58.2
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecC-CHHHHHHHHHhccCCcEEEc
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTM-DVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~v-d~~~L~~~L~kk~G~~veiV 92 (216)
+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.... ....|+..|. .+||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence 567899996 99999999999999999999999999999999997542 3678889998 899987654
No 14
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.19 E-value=7.6e-11 Score=85.46 Aligned_cols=70 Identities=16% Similarity=0.261 Sum_probs=61.0
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhcc---CCcEEEcCCCCC
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKL---KRNVEVVPAKKD 97 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~---G~~veiV~p~k~ 97 (216)
.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|++.|. .+ ||.+.++.+...
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~~ 79 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVEI 79 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC--
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCcc
Confidence 46789996 999999999999999999999999999999999974 468899999999 88 599988876543
No 15
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.19 E-value=1.1e-10 Score=76.36 Aligned_cols=63 Identities=17% Similarity=0.359 Sum_probs=56.4
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v 89 (216)
|.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.. .++...|...|. .+||.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 346789996 999999999999999999999999999999999974 468899999999 899865
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.19 E-value=1.6e-10 Score=78.73 Aligned_cols=65 Identities=17% Similarity=0.302 Sum_probs=58.7
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV 92 (216)
.+++|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.. .++...|...|. .+||.+.++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 70 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIH 70 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEee
Confidence 46789996 999999999999999999999999999999999974 367899999999 999988765
No 17
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.18 E-value=3e-11 Score=87.68 Aligned_cols=65 Identities=20% Similarity=0.219 Sum_probs=58.5
Q ss_pred CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936 24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v 89 (216)
..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...+++..|++.|+ .+||.+
T Consensus 19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 45567889996 999999999999999999999999999999999998899999999999 899864
No 18
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.18 E-value=7.7e-11 Score=79.09 Aligned_cols=66 Identities=17% Similarity=0.310 Sum_probs=59.4
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEcC
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
++++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|...|. .+||.+.++.
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 36789996 999999999999999999999999999999999974 467899999999 8999988763
No 19
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.18 E-value=1e-10 Score=77.40 Aligned_cols=63 Identities=21% Similarity=0.456 Sum_probs=56.8
Q ss_pred EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936 29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV 92 (216)
++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|.+.|. .+||.+.++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 68 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI 68 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence 368885 999999999999999999999999999999999975 368899999999 999988764
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.18 E-value=7.9e-11 Score=83.28 Aligned_cols=70 Identities=21% Similarity=0.335 Sum_probs=62.1
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcCCC
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPAK 95 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~p~ 95 (216)
...+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|+..|. .+||.+.++..+
T Consensus 7 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP 80 (84)
T ss_dssp SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred CceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence 3467889996 999999999999999999999999999999999975 368899999999 999998877543
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.17 E-value=1.1e-10 Score=80.53 Aligned_cols=68 Identities=19% Similarity=0.334 Sum_probs=61.0
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
...+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|++.|. .+||.+.++.
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence 4567899996 999999999999999999999999999999999974 367899999999 8999987764
No 22
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.16 E-value=1.2e-10 Score=78.52 Aligned_cols=67 Identities=16% Similarity=0.341 Sum_probs=59.9
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEc
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV 92 (216)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|...|. .+||.+.++
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 4677899996 999999999999999999999999999999999973 468899999999 899987654
No 23
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.16 E-value=6.7e-11 Score=81.42 Aligned_cols=67 Identities=10% Similarity=0.342 Sum_probs=60.5
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
|.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|.+.|. .+||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence 567899996 999999999999999999999999999999999975 367889999999 8999987754
No 24
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.15 E-value=1.1e-10 Score=77.32 Aligned_cols=64 Identities=17% Similarity=0.329 Sum_probs=57.5
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEE
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE 90 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~ve 90 (216)
+.+++|+|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.. .++...|...|. .+||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 567789997 999999999999999999999999999999999974 367888999999 8999764
No 25
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.14 E-value=1.2e-10 Score=78.02 Aligned_cols=63 Identities=19% Similarity=0.320 Sum_probs=56.2
Q ss_pred EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEEc
Q 027936 29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~veiV 92 (216)
++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... .+...|+..|+ .+||.+.+.
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 357886 9999999999999999999999999999999999743 67899999999 999987654
No 26
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.13 E-value=7.2e-11 Score=79.60 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=55.3
Q ss_pred EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV 92 (216)
+++|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|....+ ..|...|+ .+||.+..+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceeeE
Confidence 4678995 99999999999999999 999999999999999987655 88999999 999976543
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.11 E-value=1.5e-10 Score=76.17 Aligned_cols=61 Identities=20% Similarity=0.341 Sum_probs=54.6
Q ss_pred EEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcE
Q 027936 28 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 28 tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~v 89 (216)
+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... .+...|.+.|+ .+||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 4678896 9999999999999999999999999999999999743 57889999999 889864
No 28
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.10 E-value=3.5e-10 Score=77.52 Aligned_cols=67 Identities=24% Similarity=0.388 Sum_probs=60.1
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
|.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++...|...|. .+||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecC
Confidence 467889996 999999999999999999999999999999999964 468899999999 8999987754
No 29
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.09 E-value=2.6e-10 Score=97.70 Aligned_cols=70 Identities=19% Similarity=0.442 Sum_probs=64.3
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCCCC
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK 96 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~k 96 (216)
..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++....
T Consensus 5 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~ 74 (222)
T 1qup_A 5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGK 74 (222)
T ss_dssp CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSC
T ss_pred ceEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCC
Confidence 356788999999999999999999999999999999999999999899999999999 9999998876543
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.09 E-value=2.9e-10 Score=76.78 Aligned_cols=65 Identities=17% Similarity=0.376 Sum_probs=57.5
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV 92 (216)
.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|...|. .+||.+.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 72 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV 72 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence 35789996 9999999999999999999999999999999999754 56788999999 899987654
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.05 E-value=7.9e-10 Score=83.40 Aligned_cols=67 Identities=16% Similarity=0.250 Sum_probs=60.1
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV 92 (216)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... ++...|+..|. .+||.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 3677899996 9999999999999999999999999999999999753 67899999999 999987643
No 32
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.05 E-value=1.3e-09 Score=78.92 Aligned_cols=70 Identities=13% Similarity=0.177 Sum_probs=62.1
Q ss_pred CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEcCC
Q 027936 24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV~p 94 (216)
..+.+++|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|... ++...|+..|. .+||.+.++..
T Consensus 13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 86 (95)
T 2kkh_A 13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN 86 (95)
T ss_dssp SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence 35678899996 9999999999999999999999999999999999753 57899999999 89999887644
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.04 E-value=5.1e-10 Score=86.23 Aligned_cols=69 Identities=23% Similarity=0.398 Sum_probs=62.0
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---ecCCHHHHHHHHHhccCCcEEEcCCC
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNVEVVPAK 95 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~---G~vd~~~L~~~L~kk~G~~veiV~p~ 95 (216)
..+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|. +.+++..|++.|+ .+||.+.++.+.
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQ 145 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSS
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCcc
Confidence 357889996 99999999999999999999999999999999997 3578999999999 999999886543
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.03 E-value=8.4e-10 Score=84.42 Aligned_cols=66 Identities=14% Similarity=0.347 Sum_probs=59.4
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhccCCcEEEc
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~G~~veiV 92 (216)
..+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|... +++..|++.|. .+||.+.++
T Consensus 79 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 79 DGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp SSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred cceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 357889996 9999999999999999999999999999999999743 68899999999 999987654
No 35
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.99 E-value=8.6e-10 Score=96.19 Aligned_cols=68 Identities=18% Similarity=0.445 Sum_probs=63.0
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p 94 (216)
..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++..
T Consensus 6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEE
T ss_pred ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccC
Confidence 356788889999999999999999999999999999999999998899999999999 99999887654
No 36
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.94 E-value=9.1e-10 Score=74.72 Aligned_cols=58 Identities=19% Similarity=0.409 Sum_probs=50.4
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcE
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~v 89 (216)
.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+ .+.|. .+||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~ 61 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFE 61 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCc
Confidence 46789997 999999999999999999999999999999999987764 44666 777754
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.89 E-value=5.5e-09 Score=85.48 Aligned_cols=67 Identities=21% Similarity=0.406 Sum_probs=59.9
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcCC
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~p 94 (216)
.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|+..|. .+||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence 57889996 999999999999999999999999999999999974 468899999999 99999988754
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.86 E-value=9.3e-09 Score=78.55 Aligned_cols=67 Identities=21% Similarity=0.373 Sum_probs=60.3
Q ss_pred ceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEEEcC
Q 027936 26 VVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 26 ~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~veiV~ 93 (216)
+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|...|. .+||.+.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 578899996 999999999999999999999999999999999964 367889999999 8999887654
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.61 E-value=9.1e-08 Score=78.19 Aligned_cols=66 Identities=26% Similarity=0.399 Sum_probs=56.2
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec---CCHHHHHHHHHhcc---CCcEEE
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKL---KRNVEV 91 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~---vd~~~L~~~L~kk~---G~~vei 91 (216)
.+.+++|+|. |+|.+|+.+|+++|.+++||.++.+++.+++++|... +++..|...|+ .+ ++.+.+
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~ 90 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSL 90 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEe
Confidence 4677889997 9999999999999999999999999999999999743 67889999999 77 366643
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.52 E-value=2.4e-07 Score=71.08 Aligned_cols=64 Identities=17% Similarity=0.360 Sum_probs=55.9
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcE
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV 89 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~v 89 (216)
.+.+++|.|. |+|.+|+.+|+++|..++||.++.+++.+++++|.. .++...|...|+ .+|+.+
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred cceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 3466789996 999999999999999999999999999999999863 367888999998 888854
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.36 E-value=7.4e-07 Score=87.27 Aligned_cols=63 Identities=14% Similarity=0.365 Sum_probs=57.7
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---cCCHHHHHHHHHhccCCcEE
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE 90 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G---~vd~~~L~~~L~kk~G~~ve 90 (216)
++++|+|. |||.+|+.+|+++|.+++||.++.+|+.+++++|+. .++.+.|++.|+ ++||.+.
T Consensus 2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~ 68 (723)
T 3j09_A 2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV 68 (723)
T ss_dssp CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence 45789997 999999999999999999999999999999999963 478999999999 9999874
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=89.69 E-value=1.1 Score=34.15 Aligned_cols=67 Identities=19% Similarity=0.295 Sum_probs=49.5
Q ss_pred CceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936 25 GVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 25 ~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~k--VtV~G~-vd~~~L~~~L~kk~G~~veiV~ 93 (216)
.+..++|-|- -|-. -.-.+-++|.+++||..|.+ |..+.. +||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus 5 ~iRRlVLDVlKPh~P-~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID 80 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD 80 (100)
T ss_dssp SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred cceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 4677888884 4444 45577888999999988764 444444 445676 99999999999 9998876653
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=89.60 E-value=1.2 Score=33.66 Aligned_cols=68 Identities=25% Similarity=0.465 Sum_probs=50.1
Q ss_pred CCceEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCeE--EEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936 24 DGVVTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDLV--TVKGT-MDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 24 ~~~~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~kV--tV~G~-vd~~~L~~~L~kk~G~~veiV~ 93 (216)
..+..++|-|- -|-. -.-.+-++|.+++||..|.+ |..+..+ ||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus 4 ~~irRlVLDVlKPh~p-~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID 80 (97)
T 2raq_A 4 KGLIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD 80 (97)
T ss_dssp CSEEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred cCceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 35678888884 4444 34577788999999887764 4455544 45676 99999999999 9998876653
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=89.30 E-value=1.5 Score=33.21 Aligned_cols=67 Identities=18% Similarity=0.326 Sum_probs=49.6
Q ss_pred CceEEEEEEe--ecchhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeec-CCHHHHHHHHHhccCCcEEEcC
Q 027936 25 GVVTVVLKIR--LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 25 ~~~tv~LKV~--MhC~gCa~kI~KaL~kl~GVesV~v-----D~~t~k--VtV~G~-vd~~~L~~~L~kk~G~~veiV~ 93 (216)
.+..++|-|- +|-..-. .+-++|.+++||..|.+ |..+.. +||.|. +|.+.|.++|+ ++|-.+..|.
T Consensus 3 ~irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID 79 (96)
T 2x3d_A 3 AIRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID 79 (96)
T ss_dssp CEEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred ceEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 3567888883 5666544 67788999999988765 444444 455686 99999999999 9998877653
No 45
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=81.95 E-value=1.1 Score=33.41 Aligned_cols=35 Identities=20% Similarity=0.516 Sum_probs=27.8
Q ss_pred EEEEEEeecchhH------HHHHHHHH-hcCCCccEEEEeCC
Q 027936 28 TVVLKIRLHCEGC------ISKIKKII-YKTKGVDNVTIDGG 62 (216)
Q Consensus 28 tv~LKV~MhC~gC------a~kI~KaL-~kl~GVesV~vD~~ 62 (216)
.|.|.+.|++.+| ...|+.+| ..++||.+|.|++.
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 4666677777777 56789999 89999999988764
No 46
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=81.91 E-value=1.2 Score=32.83 Aligned_cols=35 Identities=17% Similarity=0.478 Sum_probs=27.8
Q ss_pred EEEEEEeecchhHH------HHHHHHHhcCCCccEEEEeCC
Q 027936 28 TVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG 62 (216)
Q Consensus 28 tv~LKV~MhC~gCa------~kI~KaL~kl~GVesV~vD~~ 62 (216)
.|.|.+.+.+.+|- ..|+.+|..++||.+|.|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 45666777887774 578999999999999988753
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=79.48 E-value=1.2 Score=32.76 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=26.7
Q ss_pred EEEEEEeecchhHH------HHHHHHHhcCCCccEEEEeCC
Q 027936 28 TVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG 62 (216)
Q Consensus 28 tv~LKV~MhC~gCa------~kI~KaL~kl~GVesV~vD~~ 62 (216)
.|.|.+.+++.+|. ..|+.+|..++||.+|.|++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 56666767766664 568999999999999988753
No 48
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=64.85 E-value=18 Score=26.56 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee-cCCHHHHHHHHH
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG-TMDVKELVPYLK 82 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G-~vd~~~L~~~L~ 82 (216)
.+=...|..+|..++||+-..+|..++++.|+- .-+...|.+.|.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 344779999999999995434566677777753 345666666664
No 49
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=59.83 E-value=14 Score=25.73 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=32.9
Q ss_pred eEEEEEEeecchhHH-----HHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccC
Q 027936 27 VTVVLKIRLHCEGCI-----SKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 86 (216)
Q Consensus 27 ~tv~LKV~MhC~gCa-----~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G 86 (216)
.+|+|-..-.|..|. .++++.|... ||.-..+|+..+ ..+.+.|.+.+|
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~~----------~~~~~~l~~~~g 55 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQD----------NALRDEMRTLAG 55 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTSC----------HHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCCC----------HHHHHHHHHHhC
Confidence 346666667899997 7888888765 777666666432 255666765666
No 50
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=52.59 E-value=29 Score=25.64 Aligned_cols=38 Identities=16% Similarity=0.430 Sum_probs=29.9
Q ss_pred HHHHHHhcCCCccEEEEeCCCCeEEEe--ecCCHHHHHHHHH
Q 027936 43 KIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLK 82 (216)
Q Consensus 43 kI~KaL~kl~GVesV~vD~~t~kVtV~--G~vd~~~L~~~L~ 82 (216)
-+-++|..|+||.+|-+ ..+=|||+ ..++++.|...|.
T Consensus 40 PLA~~LF~i~gVk~Vf~--g~dFITVtK~~~~dW~~ikp~I~ 79 (94)
T 2k1h_A 40 EFINRLFEIEGVKSIFY--VLDFISIDKEDNANWNELLPQIE 79 (94)
T ss_dssp HHHHHHHTSTTEEEEEE--ETTEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhCCCCeeEEEE--eCCEEEEecCCCCCHHHHHHHHH
Confidence 45566778999998765 47999997 3589999988876
No 51
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=45.48 E-value=59 Score=22.61 Aligned_cols=54 Identities=7% Similarity=0.199 Sum_probs=37.9
Q ss_pred EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEc
Q 027936 29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV 92 (216)
++|-+. +.|+.-.-+++++|..++- .+.+.|.. ......|..+++ ..|+.+..+
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~-~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCT-FMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHH-HTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 455664 9999999999999998741 22333332 244567888888 999988764
No 52
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=44.22 E-value=59 Score=23.77 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=40.7
Q ss_pred CCCCceEEEEEEe---ec--chhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEE
Q 027936 22 KDDGVVTVVLKIR---LH--CEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE 90 (216)
Q Consensus 22 ~~~~~~tv~LKV~---Mh--C~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~ve 90 (216)
+.......+|+|+ +- -..--..|++ |....||.++.++-.+++|+|.|. +.+.+.+++. .+..-.+
T Consensus 10 ~~~~~~i~~i~I~~dkIg~vIG~gGk~Ik~-I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~~-~I~~ie~ 80 (91)
T 2cpq_A 10 QLAAAFHEEFVVREDLMGLAIGTHGSNIQQ-ARKVPGVTAIELDEDTGTFRIYGE-SADAVKKARG-FLEFVED 80 (91)
T ss_dssp SSSCSEEEEEECCHHHHHHHHTTTTHHHHH-HHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHHH-HHSCCCC
T ss_pred hccCceEEEEEEChHHhhhhcCCCcHHHHH-HHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHHH-HHHhhhe
Confidence 4555667778874 22 2223334444 556679977888866799999873 6666665555 4444333
No 53
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=43.36 E-value=22 Score=29.33 Aligned_cols=60 Identities=18% Similarity=0.292 Sum_probs=41.6
Q ss_pred EEEEEEee-cchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCC--HHHHHHHHHhccCCcEEEcC
Q 027936 28 TVVLKIRL-HCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMD--VKELVPYLKEKLKRNVEVVP 93 (216)
Q Consensus 28 tv~LKV~M-hC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd--~~~L~~~L~kk~G~~veiV~ 93 (216)
.++|-|.| -|..|+..|..+|...+||..|-+-.. .-.-.+ ...-+..|+ ..|-.|.++.
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~-----d~~~~~p~~~~g~~~L~-~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGR-----LFMWEEPEIQAALKKLK-EAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEee-----cCCcCChHHHHHHHHHH-HCCCEEEEec
Confidence 67778875 599999999999999999987765211 000001 245667787 8888887654
No 54
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=43.31 E-value=66 Score=23.42 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=38.7
Q ss_pred EEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeec--CCHHHHHHHHHhccCCcEEEc
Q 027936 29 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 29 v~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~--vd~~~L~~~L~kk~G~~veiV 92 (216)
.+|-+. +.|..-.-+++++|.++.- .+.+.|..+ .....|.++++ ..|+.+..+
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVK-KLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHH-HSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 556664 9999999999999998742 223333332 44678888888 999988754
No 55
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=40.22 E-value=37 Score=24.19 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=36.6
Q ss_pred EEEe-ecchhHHHHHHHHHhcCC--CccEEEEeCCCCeEEEee--cCCHHHHHHHHHhccCCcEEEc
Q 027936 31 LKIR-LHCEGCISKIKKIIYKTK--GVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 31 LKV~-MhC~gCa~kI~KaL~kl~--GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~kk~G~~veiV 92 (216)
|.+. +.|+.-.-+++++|.+++ | +.+.|.. ......|..+++ ..|+.+...
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~ 59 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAE-GMGYQSEYL 59 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHH-HHTCEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 4553 899999999999999883 4 2233332 244578888888 999988754
No 56
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=39.06 E-value=26 Score=25.74 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCCccEEEEeCCCCeEEEee--cCCHHHHHHHHHh
Q 027936 42 SKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKE 83 (216)
Q Consensus 42 ~kI~KaL~kl~GVesV~vD~~t~kVtV~G--~vd~~~L~~~L~k 83 (216)
.-+-++|..|+||.+|-+ ..+-|||+- .++++.|...|..
T Consensus 39 SPLA~~LF~i~gVk~Vf~--g~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIFH--VMDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp CHHHHHHHHSTTEEEEEE--ETTEEEEEECTTSCSTTTHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEE--eCCEEEEecCCCCCHHHHHHHHHH
Confidence 345556778999998765 479999973 4888888888773
No 57
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=38.00 E-value=48 Score=26.96 Aligned_cols=45 Identities=13% Similarity=0.229 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCC---------------eEEEee---cCCHHHHHHHHH
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKD---------------LVTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~---------------kVtV~G---~vd~~~L~~~L~ 82 (216)
.||-.-++..+.+|+||.++.+=.+.+ -|.|+- .++...|++..-
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 478888899999999999999877654 344543 488888888775
No 58
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=36.67 E-value=64 Score=21.42 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=24.5
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEE
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI 59 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~v 59 (216)
...++|.|...-..-...|...|.+++||.+|..
T Consensus 44 ~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 44 IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 3445566665555667788999999999988754
No 59
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=34.04 E-value=1e+02 Score=20.55 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=32.8
Q ss_pred eEEEEEEeecchhHH----HHHHHHHhcCCCccEEEEeCC--------CCeEEEeecCCHHHHHHHH
Q 027936 27 VTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDGG--------KDLVTVKGTMDVKELVPYL 81 (216)
Q Consensus 27 ~tv~LKV~MhC~gCa----~kI~KaL~kl~GVesV~vD~~--------t~kVtV~G~vd~~~L~~~L 81 (216)
.++.|.|+-..-++. -+.-+.|....|+. +.++.. ...|+|.|+ ++.+..++
T Consensus 3 ~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga~-I~i~~~~~~~~~~~~~~v~I~G~--~~~v~~A~ 66 (76)
T 1dtj_A 3 ELVEMAVPENLVGAILGKGGKTLVEYQELTGAR-IQISKKGEFLPGTRNRRVTITGS--PAATQAAQ 66 (76)
T ss_dssp EEEEEEEETTTHHHHHCSTTHHHHHHHHHHCCE-EEECCTTCCSTTCCEEEEEEEES--HHHHHHHH
T ss_pred eEEEEEEChHHcceEECCCchHHHHHHHHhCCE-EEECcCCCCCCCCceeEEEEEeC--HHHHHHHH
Confidence 466777776666666 33445577777884 777753 257888997 44444443
No 60
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=33.64 E-value=56 Score=27.36 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEee---cCCHHHHHHHHH
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~k-------------------VtV~G---~vd~~~L~~~L~ 82 (216)
.||-.-++..+.+++||.++.+=.+.+. |.|+- .++.+.|++..-
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4677777888999999999998775554 44543 378888888775
No 61
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=32.10 E-value=67 Score=23.54 Aligned_cols=35 Identities=9% Similarity=0.182 Sum_probs=25.8
Q ss_pred ceEEEEEEeecchhH--HHHHHHHHhcCCCccEEEEe
Q 027936 26 VVTVVLKIRLHCEGC--ISKIKKIIYKTKGVDNVTID 60 (216)
Q Consensus 26 ~~tv~LKV~MhC~gC--a~kI~KaL~kl~GVesV~vD 60 (216)
+..+.+.+-|-.+.+ ...|+.+|..+++|+||.|-
T Consensus 50 lk~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 50 LVALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp CEEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEE
T ss_pred eeeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEE
Confidence 344444444555545 89999999999999999874
No 62
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=30.81 E-value=67 Score=26.70 Aligned_cols=45 Identities=16% Similarity=0.321 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEee---cCCHHHHHHHHH
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~k-------------------VtV~G---~vd~~~L~~~L~ 82 (216)
.||-.-++..+.+++||.++.+=.+.+. |.|+- .++...|++..-
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4677778888999999999998765443 44542 478888888765
No 63
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.53 E-value=66 Score=23.17 Aligned_cols=47 Identities=6% Similarity=0.063 Sum_probs=31.5
Q ss_pred EEEEEEeecchhHHH-----HHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhcc
Q 027936 28 TVVLKIRLHCEGCIS-----KIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 85 (216)
Q Consensus 28 tv~LKV~MhC~gCa~-----kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~ 85 (216)
.|+|-..-.|..|.. ++++.|..+ ||.-..+|+.. + ..+.+.|.+++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~---------~-~~~~~~l~~~~ 60 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM---------S-EEQRQWMYKNV 60 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT---------C-HHHHHHHHHSC
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC---------C-HHHHHHHHHHh
Confidence 455555678999996 888888765 78766666653 3 35556666453
No 64
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=29.45 E-value=73 Score=21.24 Aligned_cols=35 Identities=26% Similarity=0.523 Sum_probs=22.8
Q ss_pred ceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCC
Q 027936 26 VVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGG 62 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~ 62 (216)
+.+++|-..-.|..|. +++..|..+ ||.-..+|..
T Consensus 5 m~~v~ly~~~~C~~C~-~~~~~L~~~-~i~~~~~di~ 39 (92)
T 2khp_A 5 MVDVIIYTRPGCPYCA-RAKALLARK-GAEFNEIDAS 39 (92)
T ss_dssp CCCEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEEST
T ss_pred cccEEEEECCCChhHH-HHHHHHHHc-CCCcEEEECC
Confidence 4456555557899998 677778765 6654445543
No 65
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=28.20 E-value=1.2e+02 Score=22.35 Aligned_cols=52 Identities=12% Similarity=0.217 Sum_probs=31.1
Q ss_pred EEEEEEeecchhHHHHHHHHHhcCCC---ccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCC
Q 027936 28 TVVLKIRLHCEGCISKIKKIIYKTKG---VDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87 (216)
Q Consensus 28 tv~LKV~MhC~gCa~kI~KaL~kl~G---VesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~ 87 (216)
.|+|-..-.|..|...|+..|..+ | |.-..+|+.. .-+...+.+.|.+.+|.
T Consensus 38 ~Vvvy~~~~Cp~C~~a~k~~L~~~-~~~~i~~~~vdvd~-------~~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKATLSTLFQEL-NVPKSKALVLELDE-------MSNGSEIQDALEEISGQ 92 (129)
T ss_dssp SEEEEECTTCHHHHHHHHHHHTTS-CCCGGGEEEEEGGG-------STTHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCCchHHHHHHHHHhc-CccCCCcEEEEccc-------cCCHHHHHHHHHHHhCC
Confidence 455555678999996658888776 5 4433333321 12334566667655664
No 66
>2p2r_A Poly(RC)-binding protein 2; protein-DNA complex, RNA and DNA binding protein/DNA complex; 1.60A {Homo sapiens}
Probab=26.44 E-value=1.1e+02 Score=20.62 Aligned_cols=52 Identities=21% Similarity=0.284 Sum_probs=30.5
Q ss_pred ceEEEEEEeecchhHH----HHHHHHHhcCCCccEEEEeC-----CCCeEEEeecCCHHHHHHH
Q 027936 26 VVTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDG-----GKDLVTVKGTMDVKELVPY 80 (216)
Q Consensus 26 ~~tv~LKV~MhC~gCa----~kI~KaL~kl~GVesV~vD~-----~t~kVtV~G~vd~~~L~~~ 80 (216)
..++.|.|+-..-++. -+.-+.|....|+. +.++- ..+.|+|.|+ ++.+..+
T Consensus 4 ~~~~~i~Ip~~~vg~iIGkgG~~Ik~I~~~tga~-I~i~~~~~~~~~~~v~I~G~--~~~v~~A 64 (76)
T 2p2r_A 4 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ-IKIANPVEGSTDRQVTITGS--AASISLA 64 (76)
T ss_dssp CEEEEEEEEHHHHHHHHCGGGHHHHHHHHHHCCE-EEECCCCTTCSEEEEEEEEC--HHHHHHH
T ss_pred ceEEEEEEChHHcceEECCCChHHHHHHHHHCCE-EEEcCCCCCCCeEEEEEEeC--HHHHHHH
Confidence 4556677765444554 33444466667874 66764 2567888997 4444333
No 67
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=26.30 E-value=86 Score=26.32 Aligned_cols=45 Identities=18% Similarity=0.319 Sum_probs=33.3
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCC---------------eEEEee---cCCHHHHHHHHH
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKD---------------LVTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~---------------kVtV~G---~vd~~~L~~~L~ 82 (216)
.||-.-++..+.+|+||.++.+=.+.+ -|.|+- .++.+.|++..-
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 467777788899999999999876544 344443 378888888765
No 68
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=26.12 E-value=1.4e+02 Score=21.31 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=20.4
Q ss_pred EEEEE-eecchhHHHHH------HHHHhcCCCccEEEEeCC
Q 027936 29 VVLKI-RLHCEGCISKI------KKIIYKTKGVDNVTIDGG 62 (216)
Q Consensus 29 v~LKV-~MhC~gCa~kI------~KaL~kl~GVesV~vD~~ 62 (216)
+.|.+ .-.|..|..-. .+....+++|.-+.+|..
T Consensus 34 vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 44444 36799998643 233344567776667653
No 69
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=25.83 E-value=90 Score=26.29 Aligned_cols=46 Identities=11% Similarity=0.184 Sum_probs=33.9
Q ss_pred chhHHHHHHHHHhcCCCccEEEEeCCCC-------------------eEEEee---cCCHHHHHHHHH
Q 027936 37 CEGCISKIKKIIYKTKGVDNVTIDGGKD-------------------LVTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 37 C~gCa~kI~KaL~kl~GVesV~vD~~t~-------------------kVtV~G---~vd~~~L~~~L~ 82 (216)
-.||-.-++..+.+++||.++.+=.+.+ -|.|+- .++.+.|++..-
T Consensus 48 agGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 48 AMGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp ECSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ecCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 3567777888899999999999876543 244543 378888888775
No 70
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=25.58 E-value=67 Score=23.46 Aligned_cols=50 Identities=20% Similarity=0.299 Sum_probs=30.8
Q ss_pred EEEEEEeecchhHH-----HHHHHHHhcCCCccEEEEeCCC--------CeEEEeecCCHHHHHHHH
Q 027936 28 TVVLKIRLHCEGCI-----SKIKKIIYKTKGVDNVTIDGGK--------DLVTVKGTMDVKELVPYL 81 (216)
Q Consensus 28 tv~LKV~MhC~gCa-----~kI~KaL~kl~GVesV~vD~~t--------~kVtV~G~vd~~~L~~~L 81 (216)
+++|.|.-+.-+|+ ..|++ |.+..|+. |.|+-.. ..|+|.|+ .+.|..++
T Consensus 8 ~~~i~IP~~~vG~IIGkgG~~Ik~-I~~~TGa~-I~I~~~~~~~~~~~~r~V~I~G~--~e~v~~A~ 70 (107)
T 2hh2_A 8 EMTFSIPTHKCGLVIGRGGENVKA-INQQTGAF-VEISRQLPPNGDPNFKLFIIRGS--PQQIDHAK 70 (107)
T ss_dssp CEEEEEEGGGTTTTSTTTTCHHHH-HHHHSSSE-EEECCCCCTTCCTTEEEEEEESC--HHHHHHHH
T ss_pred eEEEEECHHHcCccCCCCcHHHHH-HHHHhCCE-EEEcCccCCCCCCCceEEEEECC--HHHHHHHH
Confidence 66778875555555 44554 66667884 7777642 57888884 44444443
No 71
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=24.53 E-value=1.3e+02 Score=21.90 Aligned_cols=35 Identities=9% Similarity=0.089 Sum_probs=25.1
Q ss_pred eEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeC
Q 027936 27 VTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDG 61 (216)
Q Consensus 27 ~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~ 61 (216)
-++++.|.-.+..=...+-..|+.|+||.++.+=+
T Consensus 42 GkiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lvy 76 (95)
T 2jsx_A 42 GQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVY 76 (95)
T ss_dssp TEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESS
T ss_pred CCEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEEE
Confidence 36778887555544455558999999999887644
No 72
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=24.12 E-value=98 Score=27.02 Aligned_cols=53 Identities=19% Similarity=0.265 Sum_probs=37.1
Q ss_pred CceEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCe-------------------EEEee---cCCHHHHHHHHH
Q 027936 25 GVVTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDL-------------------VTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 25 ~~~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~k-------------------VtV~G---~vd~~~L~~~L~ 82 (216)
.+.+++| -.||-+-++..+.+++||.++.+=.+.+. |.|+- .++.++|++..-
T Consensus 93 ~~e~a~f-----AgGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 93 GQQFAQF-----GAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp TCEEEEE-----EESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CCeEEEE-----ecCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3455555 34677778888999999999998765543 44543 377788887765
No 73
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=23.96 E-value=1.2e+02 Score=22.00 Aligned_cols=55 Identities=13% Similarity=0.064 Sum_probs=36.8
Q ss_pred EEEEEEe-ecchhHHHHHHHHHhcCC-C-ccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEc
Q 027936 28 TVVLKIR-LHCEGCISKIKKIIYKTK-G-VDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV 92 (216)
Q Consensus 28 tv~LKV~-MhC~gCa~kI~KaL~kl~-G-VesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV 92 (216)
..+|-+. +.|+.-.-+++++|.+++ | |-.|.+|- ......|.++++ ..|+.+..+
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~Ge~L~Vl~dd---------~~a~~dIp~~~~-~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDC---------PQSINNIPLDAR-NHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCSSCEEEEEEBC---------SSSSCHHHHHHH-HHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCCCCEEEEEECC---------cchHHHHHHHHH-HCCCEEEEE
Confidence 3445554 899999999999999874 2 32232221 234466778888 899988654
No 74
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=23.75 E-value=1.8e+02 Score=20.20 Aligned_cols=46 Identities=26% Similarity=0.416 Sum_probs=27.6
Q ss_pred CceEEEEEEeecchhHH----HHHHHHHhcCCCccEEEEeCC-----CCeEEEeec
Q 027936 25 GVVTVVLKIRLHCEGCI----SKIKKIIYKTKGVDNVTIDGG-----KDLVTVKGT 71 (216)
Q Consensus 25 ~~~tv~LKV~MhC~gCa----~kI~KaL~kl~GVesV~vD~~-----t~kVtV~G~ 71 (216)
...+++|.|+-..-+++ -+.-+.|....|+. +.++.. ...|+|+|+
T Consensus 12 ~~~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga~-I~I~~~~~~~~~~~v~I~G~ 66 (89)
T 1j5k_A 12 PIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS-IKIDEPLEGSEDRIITITGT 66 (89)
T ss_dssp CEEEEEEEEEHHHHHHHHCGGGHHHHHHHHHTCCE-EEECSCCSSSSEEEEEEEEE
T ss_pred CeEEEEEEEChhhcceeECCCCHhHHHHHHHhCCe-EEecCCCCCCCccEEEEEcC
Confidence 34556666664443343 23344466677884 777753 467889987
No 75
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=23.67 E-value=1e+02 Score=19.27 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=20.1
Q ss_pred EEEEEeecchhHHHHHHHHHhcCCCccEEEEeCC
Q 027936 29 VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGG 62 (216)
Q Consensus 29 v~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~ 62 (216)
++|-..-.|..|. +++..|..+ ||.-..+|..
T Consensus 3 i~~y~~~~C~~C~-~~~~~l~~~-~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCT-ATKKALDRA-GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHH-HHHHHHHHT-TCCCEEEETT
T ss_pred EEEEeCCCChHHH-HHHHHHHHc-CCCcEEEECC
Confidence 3333346799998 577777766 6655555543
No 76
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=23.63 E-value=1.5e+02 Score=21.13 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=31.5
Q ss_pred EEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCC
Q 027936 28 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87 (216)
Q Consensus 28 tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~ 87 (216)
.|+|-..-.|..|. +++..|..+ ||.-..+|+.. .-+...+.+.|.+.+|.
T Consensus 18 ~v~vy~~~~Cp~C~-~ak~~L~~~-~i~~~~~dvd~-------~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 18 RVVIFSKSYCPHST-RVKELFSSL-GVECNVLELDQ-------VDDGARVQEVLSEITNQ 68 (114)
T ss_dssp SEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEETTT-------STTHHHHHHHHHHHHSC
T ss_pred CEEEEEcCCCCcHH-HHHHHHHHc-CCCcEEEEecC-------CCChHHHHHHHHHHhCC
Confidence 35554457899997 778888776 66543344321 12556777777545554
No 77
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=23.38 E-value=1.2e+02 Score=24.43 Aligned_cols=49 Identities=6% Similarity=0.060 Sum_probs=37.1
Q ss_pred HHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHH----HHHHHHhccCCcEEE
Q 027936 42 SKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKE----LVPYLKEKLKRNVEV 91 (216)
Q Consensus 42 ~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~----L~~~L~kk~G~~vei 91 (216)
.-++..|..+ |-+.|.+=++++-|.++...+.+. |.+.|.++.|+.+.+
T Consensus 25 adLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~~v~v 77 (183)
T 2hiy_A 25 AELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQSF 77 (183)
T ss_dssp HHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTTCCCC
T ss_pred HHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCCCCCE
Confidence 4567777777 899999999999999987667554 455566678887753
No 78
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=23.27 E-value=1.4e+02 Score=20.00 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCC
Q 027936 38 EGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMD 73 (216)
Q Consensus 38 ~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd 73 (216)
+.-+.-+-+.+..| |-.++.+-+..++|||.|+..
T Consensus 17 ekfaailikvfael-gyndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 17 EKFAAILIKVFAEL-GYNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp HHHHHHHHHHHHHT-TCCSCEEEECSSCEEEEEECC
T ss_pred HHHHHHHHHHHHHh-CcccceeEEcCCEEEEEeEEc
Confidence 34444455555555 777788888899999998754
No 79
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=22.75 E-value=1.2e+02 Score=22.92 Aligned_cols=41 Identities=10% Similarity=0.041 Sum_probs=25.8
Q ss_pred ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCC
Q 027936 35 LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87 (216)
Q Consensus 35 MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~ 87 (216)
-.|..|. ++++.|..+ ||.-..+|+.. + ..+.+.|.+.+|+
T Consensus 48 ~~Cp~C~-~ak~~L~~~-gv~y~~vdI~~---------d-~~~~~~L~~~~G~ 88 (135)
T 2wci_A 48 PSCGFSA-QAVQALAAC-GERFAYVDILQ---------N-PDIRAELPKYANW 88 (135)
T ss_dssp BSSHHHH-HHHHHHHTT-CSCCEEEEGGG---------C-HHHHHHHHHHHTC
T ss_pred CCCccHH-HHHHHHHHc-CCceEEEECCC---------C-HHHHHHHHHHHCC
Confidence 4799998 678888776 77655555432 2 2456666544554
No 80
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=21.68 E-value=30 Score=26.49 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=14.7
Q ss_pred EEEEeCCCCeEEEeecCCHHHHH
Q 027936 56 NVTIDGGKDLVTVKGTMDVKELV 78 (216)
Q Consensus 56 sV~vD~~t~kVtV~G~vd~~~L~ 78 (216)
.+++....+.||++|.++...-.
T Consensus 78 ~i~V~V~~g~VtLsG~v~s~~~r 100 (132)
T 2kgs_A 78 DFGLKVERDTVTLTGTAPSSEHK 100 (132)
T ss_dssp TCEEEEEETEEEEECEESSHHHH
T ss_pred ceEEEEECCEEEEEEEECCHHHH
Confidence 44555667888888886644333
No 81
>2y3m_A Emhofq, protein transport protein HOFQ; secretin, DNA uptake, competence; 2.30A {Aggregatibacter actinomycetemcomitans}
Probab=21.40 E-value=1.5e+02 Score=22.85 Aligned_cols=59 Identities=17% Similarity=0.306 Sum_probs=35.1
Q ss_pred CceEEEEEEeecchhHHHHHHHHHh----cC-CCccEEEEeCCCCeEEEeec-CCHHHHHHHHHhccCC
Q 027936 25 GVVTVVLKIRLHCEGCISKIKKIIY----KT-KGVDNVTIDGGKDLVTVKGT-MDVKELVPYLKEKLKR 87 (216)
Q Consensus 25 ~~~tv~LKV~MhC~gCa~kI~KaL~----kl-~GVesV~vD~~t~kVtV~G~-vd~~~L~~~L~kk~G~ 87 (216)
.+.+-+|.+. ... +..+...|. .+ ..-.+|.+|..++.++|+++ -....|.+.|+ .+..
T Consensus 104 ~~~~~v~~L~--y~~-a~~~~~~l~~~~~~l~~~~g~v~~d~~tN~liv~~~~~~i~~i~~li~-~lD~ 168 (175)
T 2y3m_A 104 QLNTATIKLH--FAK-ASEVMKSLTGGSGSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIK-ELDK 168 (175)
T ss_dssp CCEEEEEECS--SSC-HHHHHHHHHCSSSCSSCTTCEEEEETTTTEEEEEECHHHHHHHHHHHH-HHCC
T ss_pred CcEEEEEEEe--CCC-HHHHHHHHhhCcccccCCCceEEEECCCCEEEEEcCHHHHHHHHHHHH-HhCC
Confidence 3455555553 332 234455555 22 22347999999999999987 34466666665 4443
No 82
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=21.26 E-value=37 Score=26.42 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=25.3
Q ss_pred CeEEEeecCCHHHHHHHHHhccCCcEEEcCCC
Q 027936 64 DLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK 95 (216)
Q Consensus 64 ~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p~ 95 (216)
.-|.|+|.-|-..|++.|+++.|++|.+++++
T Consensus 111 ~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHCCEEEEEECG
T ss_pred EEEEEECChhHHHHHHHHHHHcCcEEEEEeCC
Confidence 34556788899999999993369999998763
No 83
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=21.19 E-value=1.9e+02 Score=24.14 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=40.9
Q ss_pred eEEEEEEe-ecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCcEEEcCC
Q 027936 27 VTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA 94 (216)
Q Consensus 27 ~tv~LKV~-MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~veiV~p 94 (216)
-.|++-|. --|..|+++|...|..-+.|. +.|-.+ ++--. .-+-.+=+..|. ..|-++.|...
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL~~~~~v~-L~If~a--RLY~~-~~~~~~gLr~L~-~aG~~v~iM~~ 163 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFISKNKHVS-LCIKTA--RIYDD-QGRCQEGLRTLA-EAGAKISIMTY 163 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHHhhCCCeE-EEEEEE--eeccc-CchHHHHHHHHH-HCCCeEEecCH
Confidence 45666676 349999999999999998884 444321 11111 223445566666 67888888754
No 84
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=20.92 E-value=1.3e+02 Score=22.53 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=31.7
Q ss_pred eEEEEEEeecchhHHHHHHHHHhcCC--CccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCC
Q 027936 27 VTVVLKIRLHCEGCISKIKKIIYKTK--GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87 (216)
Q Consensus 27 ~tv~LKV~MhC~gCa~kI~KaL~kl~--GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~ 87 (216)
..|+|-..-.|..|. ++++.|...- ||.-..+|+ .-..+...+.+.|.+.+|+
T Consensus 14 ~~Vvvysk~~Cp~C~-~ak~lL~~~~~~~v~~~~idi-------d~~~d~~~~~~~l~~~~G~ 68 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSK-GMKELLENEYQFIPNYYIIEL-------DKHGHGEELQEYIKLVTGR 68 (127)
T ss_dssp CSEEEEECTTCHHHH-HHHHHHHHHEEEESCCEEEEG-------GGSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEEcCCCccHH-HHHHHHHHhcccCCCcEEEEe-------cCCCCHHHHHHHHHHHcCC
Confidence 346666667899998 6778887641 222222222 2224667788888755565
No 85
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=20.84 E-value=1.5e+02 Score=19.67 Aligned_cols=46 Identities=24% Similarity=0.292 Sum_probs=27.0
Q ss_pred cchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCCc
Q 027936 36 HCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 88 (216)
Q Consensus 36 hC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~~ 88 (216)
.|..|. ++++.|..+ ||.-..+|+.... |..++ .+.+.|.+.+|+.
T Consensus 13 ~Cp~C~-~ak~~L~~~-gi~y~~idI~~~~----~~~~~-~~~~~l~~~~g~~ 58 (87)
T 1aba_A 13 KCGPCD-NAKRLLTVK-KQPFEFINIMPEK----GVFDD-EKIAELLTKLGRD 58 (87)
T ss_dssp CCHHHH-HHHHHHHHT-TCCEEEEESCSBT----TBCCH-HHHHHHHHHHTCS
T ss_pred cCccHH-HHHHHHHHc-CCCEEEEEeeccc----cccCH-HHHHHHHHHhCCC
Confidence 899998 677777664 7776666664221 22343 4445555455554
No 86
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=20.55 E-value=65 Score=25.84 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=27.7
Q ss_pred hcCCCccEEEEeCCCCeEEEee-cCCHHHHHHHHH
Q 027936 49 YKTKGVDNVTIDGGKDLVTVKG-TMDVKELVPYLK 82 (216)
Q Consensus 49 ~kl~GVesV~vD~~t~kVtV~G-~vd~~~L~~~L~ 82 (216)
..||||.++..|+.+.+|+=.- -+|-+.+.+.|.
T Consensus 118 ~aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl~ 152 (154)
T 3gzb_A 118 VAIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQLA 152 (154)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECHHHHHHHHT
T ss_pred EecCceEEEeecCCccchhhhHhHHhHHHHHHHhh
Confidence 3689999999999999998643 488888877664
No 87
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=20.44 E-value=1.2e+02 Score=27.07 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=35.2
Q ss_pred chhHHHHHHHHHhcCCCccEEEEeCCCCe-----------------EEEee---cCCHHHHHHHHH
Q 027936 37 CEGCISKIKKIIYKTKGVDNVTIDGGKDL-----------------VTVKG---TMDVKELVPYLK 82 (216)
Q Consensus 37 C~gCa~kI~KaL~kl~GVesV~vD~~t~k-----------------VtV~G---~vd~~~L~~~L~ 82 (216)
=.||-.-++..+.+|+||.++.+=.+.+. |.|+- .++...|++..-
T Consensus 8 agGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 8 AGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp ECSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ecCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 35788888899999999999998776553 45543 488888888765
No 88
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=20.23 E-value=1.4e+02 Score=22.07 Aligned_cols=54 Identities=13% Similarity=0.145 Sum_probs=36.4
Q ss_pred eEEEEEEeecchhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeecCCHHHHHHHHHhccCC-cE
Q 027936 27 VTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR-NV 89 (216)
Q Consensus 27 ~tv~LKV~MhC~gCa~kI~KaL~kl~GVesV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~-~v 89 (216)
..|+|--.-.|..|. ++++.|. -.||.-..+|+..+ ..+.+.|...|. .+|. .+
T Consensus 5 ~~i~iY~~p~C~~c~-ka~~~L~-~~gi~~~~~di~~~------~~~~~eL~~~l~-~~g~~~~ 59 (121)
T 3rdw_A 5 KDVTIYHNPRCSKSR-ETLALVE-QQGITPQVVLYLET------PPSVDKLKELLQ-QLGFSDA 59 (121)
T ss_dssp -CCEEECCTTCHHHH-HHHHHHH-TTTCCCEEECTTTS------CCCHHHHHHHHH-HTTCSSG
T ss_pred CcEEEEECCCCHHHH-HHHHHHH-HcCCCcEEEeeccC------CCcHHHHHHHHH-hcCCcCH
Confidence 335554457899998 5555554 46887666776543 467889999998 8886 54
No 89
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=20.14 E-value=1.9e+02 Score=21.21 Aligned_cols=40 Identities=20% Similarity=0.182 Sum_probs=25.2
Q ss_pred cchhHHHHHHHHHhcCCCcc-EEEEeCCCCeEEEeecCCHHHHHHHHHhccCC
Q 027936 36 HCEGCISKIKKIIYKTKGVD-NVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 87 (216)
Q Consensus 36 hC~gCa~kI~KaL~kl~GVe-sV~vD~~t~kVtV~G~vd~~~L~~~L~kk~G~ 87 (216)
.|..|. ++++.|..+ ||. -..+|+.. + ..+.+.|.+.+|+
T Consensus 34 ~Cp~C~-~ak~lL~~~-gv~~~~~vdV~~---------d-~~~~~~l~~~tg~ 74 (118)
T 2wem_A 34 QCGFSN-AVVQILRLH-GVRDYAAYNVLD---------D-PELRQGIKDYSNW 74 (118)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCCEEEESSS---------C-HHHHHHHHHHHTC
T ss_pred ccHHHH-HHHHHHHHc-CCCCCEEEEcCC---------C-HHHHHHHHHHhCC
Confidence 799998 778888776 773 44455432 2 3456666545454
Done!