BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027942
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 216 bits (551), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 149/200 (74%), Gaps = 15/200 (7%)
Query: 14 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 73
MTSS+H++SDN + E+++ +S Q P+ ++ SI T ++ Y+ G ++MAP
Sbjct: 1 MTSSIHELSDNIGSHEKQEQRDSHFQPPIPS-ARNYESIVT-SLVYS--DPGTTNSMAPG 56
Query: 74 AYPYPDPYYRSIFAPYDAQPYPPQPYGGQPM-LMGIQQAGVPLPTDAVEEPVFVNAKQYH 132
YPYPDPYYRSIFAP PPQPY G + LMG+QQ GVPLP+DAVEEPVFVNAKQYH
Sbjct: 57 QYPYPDPYYRSIFAP------PPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110
Query: 133 GILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMAS 192
GILRRRQSRA+ ES+NKV+KSRKPYLHESRHLHA+RR RGCGGRFLN+KK + + +
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170
Query: 193 DDKSQSNLNLNSDKNEIASS 212
++KS NL++ K+ +A+S
Sbjct: 171 EEKS----NLSAGKSAMAAS 186
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 145/204 (71%), Gaps = 17/204 (8%)
Query: 14 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 73
MTSSVH++SDN+++ +++ P+SQ + P+ G S SI T +V MA
Sbjct: 1 MTSSVHELSDNNESHAKKERPDSQTRPQVPS-GRSSESIDTNSVY--------SEPMAHG 51
Query: 74 AYPYPDPYYRSIFAPYDAQPYPPQPY-GGQPMLMGIQQAGVPLPTDAVEEPVFVNAKQYH 132
YPYPDPYYRS+FA Q Y P PY G Q LMG+QQ GVPL DAVEEPVFVNAKQYH
Sbjct: 52 LYPYPDPYYRSVFA---QQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYH 108
Query: 133 GILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK----NENQQK 188
GILRRRQSRAK E+ N+ +K++KPY+HESRHLHA+RR RGCGGRFLN+KK ++ +++
Sbjct: 109 GILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEE 168
Query: 189 GMASDDKSQSNLNLNSDKNEIASS 212
+ ++ S+++ +L S+K +A+S
Sbjct: 169 ATSDENTSEASSSLRSEKLAMATS 192
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 114/209 (54%), Gaps = 32/209 (15%)
Query: 10 RDGLMTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHA 69
++ +T+S D SD +++ H G++ P P+ Q H VG
Sbjct: 79 KESQVTTSPQSAGDYSDKNQESLH-----------HGITQP---PPHPQLVGHTVGWA-- 122
Query: 70 MAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMLMGIQQAGVPLPTDAVEEPVFVNAK 129
++ PY DPYY + Y P PYGG P + +PLP + +EPVFVNAK
Sbjct: 123 ---SSNPYQDPYYAGVMGAYGHHPLGFVPYGGMP------HSRMPLPPEMAQEPVFVNAK 173
Query: 130 QYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKG 189
QY ILRRRQ+RAKAE E K++KSRKPYLHESRH HA+RR RG GGRF +KK +
Sbjct: 174 QYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASK 231
Query: 190 MASDDKS-----QSNLNLNSDKNEIASSD 213
+++KS QS + NSD+ E + D
Sbjct: 232 RKAEEKSNGHVTQSPSSSNSDQGEAWNGD 260
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 93/147 (63%), Gaps = 12/147 (8%)
Query: 55 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMLMGIQQAGVP 114
PN+ +A A A ++ Y DP+Y + A Y PQ P ++ + VP
Sbjct: 122 PNIHFAP-------AQANFSFHYADPHYGGLLAA----TYLPQAPTCNPQMVSMIPGRVP 170
Query: 115 LPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGC 173
LP + E +PVFVNAKQYH I+RRRQ RAK E++NK++++RKPYLHESRH+HAL+R RG
Sbjct: 171 LPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGS 230
Query: 174 GGRFLNSKKNENQQKGMASDDKSQSNL 200
GGRFLN+KK + + A+ ++ Q L
Sbjct: 231 GGRFLNTKKLLQESEQAAAREQEQDKL 257
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 77/113 (68%), Gaps = 10/113 (8%)
Query: 71 APAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMLMGIQQAGVPLPTDAVE-EPVFVNAK 129
A ++ Y DP++ + P Y Q + Q VPLP D +E EPVFVNAK
Sbjct: 129 ANFSFHYADPHFGGLM---------PAAYLPQATIWNPQMTRVPLPFDLIENEPVFVNAK 179
Query: 130 QYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK 182
Q+H I+RRRQ RAK E++NK++K+RKPYLHESRH+HAL+R RG GGRFLN+KK
Sbjct: 180 QFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKK 232
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 87/153 (56%), Gaps = 12/153 (7%)
Query: 66 AGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMLMGIQQAGVPLPTDAVEEPVF 125
GH +A PY DPYY + Y Q +PY +G+ + LP D +EPV+
Sbjct: 122 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPY------LGMPRERTALPLDMAQEPVY 175
Query: 126 VNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 185
VNAKQY GILRRR++RAKAE E KV++ RKPYLHESRH HA+RRAR GGRF + E
Sbjct: 176 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 235
Query: 186 QQKGMASDDKSQSNLN------LNSDKNEIASS 212
+ D + S N + +D NE +S
Sbjct: 236 GEDAGGRDRERGSATNSSGSEQVETDSNETLNS 268
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 105 LMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRH 163
+MG+ + VPLP E EP+FVNAKQYH ILRRR+ RAK E++NK++K RKPYLHESRH
Sbjct: 160 MMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRH 219
Query: 164 LHALRRARGCGGRFLNSKKNENQQKGMASD 193
LHAL+RARG GGRFLN+KK + + S
Sbjct: 220 LHALKRARGSGGRFLNTKKLQESSNSLCSS 249
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 86 FAPYDAQPYPPQPYGGQPMLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKA 144
F + + PY Q P + G+ + +PLP + E EP+FVNAKQY ILRRR+ RAK
Sbjct: 134 FNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKL 193
Query: 145 ESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMA 191
E++NK++K RKPYLHESRHLHAL+R RG GGRFLN+KK++ ++
Sbjct: 194 EAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLS 240
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 21/161 (13%)
Query: 57 VQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMLMGIQQAGVPLP 116
+Q A + G M +P+ + YY + A Y Q G+ M +PL
Sbjct: 82 MQSACFEFGFAQPMMYTKHPHVEQYYGVVSA------YGSQRSSGRVM--------IPLK 127
Query: 117 TDAVEE-PVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGG 175
+ E+ ++VN+KQYHGI+RRRQSRAKAE K+ + RKPY+H SRHLHA+RR RG GG
Sbjct: 128 METEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGG 184
Query: 176 RFLNSKKNENQQKGMASDDKSQSNLNLNSDKNEIASSDRQS 216
RFLN+K + ++ S+ +S + +NE +S R++
Sbjct: 185 RFLNTKTADAAKQSKPSNSQSSEVFH---PENETINSSREA 222
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 89 YDAQPYPPQPYGGQPMLMGIQ-QAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAES- 146
Y PY Q Y G G Q + +PL + + ++VN+KQYHGI+RRRQSRAKA +
Sbjct: 102 YTKYPYGEQQYYGVVSAYGSQSRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAV 161
Query: 147 -ENKVLKSR--KPYLHESRHLHALRRARGCGGRFLNSKKNENQQKG 189
+ K L SR KPY+H SRHLHALRR RG GGRFLN+K + G
Sbjct: 162 LDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSG 207
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 118 DAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRF 177
+ VEEP++VNAKQY+ IL+RR +RAK ESENK+ K+RK Y HESRH HA+RR RGCGGRF
Sbjct: 225 EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRF 284
Query: 178 L 178
L
Sbjct: 285 L 285
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 113 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 170
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 310
Query: 171 RGCGGRFLNSKKNEN 185
RG GGRF + K+ ++
Sbjct: 311 RGEGGRFFSPKEKDS 325
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 113 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 170
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 252 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 311
Query: 171 RGCGGRFLNSKKNEN 185
RG GGRF + K+ ++
Sbjct: 312 RGEGGRFFSPKEKDS 326
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 113 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 170
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 171 RGCGGRFLNSKKNEN 185
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 113 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 170
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 171 RGCGGRFLNSKKNEN 185
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 115 LPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCG 174
L T E+P +VNAKQY+ IL+RR +RAK E + ++ + RKPYLHESRH HA+RR RG G
Sbjct: 152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEG 211
Query: 175 GRFLNSK--KNENQQKGMASDDKSQSN 199
GRFL + K +K ASDD S+
Sbjct: 212 GRFLTAAEIKAMKSKKSGASDDPDDSH 238
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 116 PTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGG 175
P++ +E+P +VNAKQY+ IL+RR +RAK E K+ + R+PYLHESRH HA+RR RG GG
Sbjct: 179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGG 238
Query: 176 RFLNS 180
RFL +
Sbjct: 239 RFLTA 243
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 122 EPVFVNAKQYHGILRRRQSRAKAESENK-VLKSRKPYLHESRHLHALRRARGCGGRFLNS 180
E ++VNAKQYH IL+RR++RAK E + V ++KPYLHESRH HA+RR RG GGRFL +
Sbjct: 8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTA 67
Query: 181 KK 182
K
Sbjct: 68 DK 69
>sp|Q3AAE9|MURA1_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=murA1 PE=3 SV=1
Length = 420
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Query: 83 RSIFAPYDAQ--PYPPQPYGGQPMLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQS 140
+SI P D + PYP P QP ++ + + T + E VF N ++ LRR +
Sbjct: 284 KSIIKPVDIKTMPYPGFPTDMQPQILALLT--LAQGTSIISEGVFDNRFKHVEELRRMGA 341
Query: 141 RAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMASDDKSQSNL 200
+ ES V+K S H LR A L + + +G+ + D+ NL
Sbjct: 342 DIRLESRIAVIKGVPKLTGASVIAHDLRAAAALVIAGL-AAEGMTVLEGIKNLDRGYENL 400
Query: 201 NL 202
+L
Sbjct: 401 DL 402
>sp|Q2SQL8|THIC_HAHCH Phosphomethylpyrimidine synthase OS=Hahella chejuensis (strain KCTC
2396) GN=thiC PE=3 SV=1
Length = 638
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 2 NLSCRFYMRDGLMTSSVHDMSDNSDADEQRKHPESQLQSSTPAM--GMSHPSITTPNVQY 59
N+S Y R G++T + ++ + ++ E+ ++S P M G + P TP ++
Sbjct: 142 NVSQLHYARKGIITPEMEYIAIRENLALEQAEIENAMRSQHPGMNFGANTPRYITP--EF 199
Query: 60 ATHQVGAGHAMAPAAYPYPD 79
+V AG A+ P +P+
Sbjct: 200 VRQEVAAGRAVIPCNINHPE 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,035,914
Number of Sequences: 539616
Number of extensions: 3940640
Number of successful extensions: 10998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 10822
Number of HSP's gapped (non-prelim): 225
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)