Query 027947
Match_columns 216
No_of_seqs 136 out of 1073
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:38:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 4.9E-44 1.7E-48 326.5 13.6 173 10-216 11-186 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 1.6E-41 5.4E-46 321.5 18.4 170 10-216 5-175 (566)
3 3eol_A Isocitrate lyase; seatt 94.6 2.3 7.7E-05 38.8 17.0 34 171-205 269-303 (433)
4 2ze3_A DFA0005; organic waste 93.9 1.7 5.8E-05 37.1 13.9 37 168-204 168-204 (275)
5 3i4e_A Isocitrate lyase; struc 92.5 2.5 8.4E-05 38.6 13.4 34 171-205 274-308 (439)
6 3lg3_A Isocitrate lyase; conse 91.6 3 0.0001 38.0 12.8 34 171-205 274-308 (435)
7 3eoo_A Methylisocitrate lyase; 91.4 0.2 6.9E-06 43.5 4.7 41 168-212 171-211 (298)
8 1zlp_A PSR132, petal death pro 91.1 0.16 5.3E-06 44.6 3.8 41 168-212 189-229 (318)
9 1s2w_A Phosphoenolpyruvate pho 91.1 0.22 7.5E-06 43.1 4.7 41 170-212 172-213 (295)
10 1xg4_A Probable methylisocitra 90.9 0.22 7.6E-06 43.1 4.5 40 169-212 168-207 (295)
11 2hjp_A Phosphonopyruvate hydro 90.3 0.2 6.8E-06 43.3 3.6 41 170-212 168-209 (290)
12 3ih1_A Methylisocitrate lyase; 89.9 0.26 9E-06 42.9 4.1 39 170-212 177-215 (305)
13 3lye_A Oxaloacetate acetyl hyd 89.0 0.47 1.6E-05 41.3 5.1 40 170-212 180-219 (307)
14 2ftp_A Hydroxymethylglutaryl-C 88.9 6.8 0.00023 33.3 12.4 118 52-211 84-206 (302)
15 3nav_A Tryptophan synthase alp 88.5 1.8 6.3E-05 36.8 8.4 118 47-211 24-154 (271)
16 1q7z_A 5-methyltetrahydrofolat 88.4 7.4 0.00025 36.4 13.2 106 54-212 121-230 (566)
17 3b8i_A PA4872 oxaloacetate dec 88.1 0.28 9.4E-06 42.4 2.9 39 170-212 170-208 (287)
18 1ydn_A Hydroxymethylglutaryl-C 86.7 12 0.00043 31.4 12.6 112 62-211 86-202 (295)
19 3qze_A DHDPS, dihydrodipicolin 86.4 15 0.00051 31.5 15.2 107 53-212 42-153 (314)
20 2qiw_A PEP phosphonomutase; st 85.4 0.42 1.4E-05 40.5 2.5 35 170-204 170-204 (255)
21 3qfe_A Putative dihydrodipicol 85.2 17 0.00059 31.2 14.0 47 53-105 30-77 (318)
22 3tak_A DHDPS, dihydrodipicolin 85.1 16 0.00056 30.8 14.6 107 53-212 20-131 (291)
23 1ydo_A HMG-COA lyase; TIM-barr 85.1 11 0.00038 32.2 11.6 105 64-207 90-199 (307)
24 2vc6_A MOSA, dihydrodipicolina 84.9 17 0.00057 30.7 14.6 107 53-212 19-130 (292)
25 2ehh_A DHDPS, dihydrodipicolin 84.9 17 0.00057 30.7 14.5 107 53-212 19-130 (294)
26 3flu_A DHDPS, dihydrodipicolin 84.7 17 0.00059 30.7 14.9 107 53-212 26-137 (297)
27 3vnd_A TSA, tryptophan synthas 84.6 3.6 0.00012 34.8 8.1 120 45-211 20-152 (267)
28 2v9d_A YAGE; dihydrodipicolini 84.2 20 0.00069 31.1 14.5 46 53-104 50-96 (343)
29 3ist_A Glutamate racemase; str 84.1 8.5 0.00029 32.4 10.2 49 161-213 47-96 (269)
30 2r8w_A AGR_C_1641P; APC7498, d 84.1 20 0.00068 31.0 14.7 107 53-212 53-164 (332)
31 3na8_A Putative dihydrodipicol 84.0 19 0.00066 30.8 14.6 107 53-212 43-154 (315)
32 1lt8_A Betaine-homocysteine me 83.9 15 0.0005 33.0 12.2 97 54-206 134-234 (406)
33 3a5f_A Dihydrodipicolinate syn 83.8 18 0.00063 30.4 12.3 107 53-212 20-131 (291)
34 1xky_A Dihydrodipicolinate syn 83.7 19 0.00066 30.5 14.9 107 53-212 31-142 (301)
35 3b4u_A Dihydrodipicolinate syn 83.6 19 0.00066 30.4 12.9 46 53-104 22-68 (294)
36 2ojp_A DHDPS, dihydrodipicolin 83.5 19 0.00066 30.3 13.8 47 53-105 20-67 (292)
37 2rfg_A Dihydrodipicolinate syn 83.5 20 0.00067 30.4 14.2 46 53-104 19-65 (297)
38 3daq_A DHDPS, dihydrodipicolin 83.4 20 0.00067 30.3 14.1 46 53-104 21-67 (292)
39 3si9_A DHDPS, dihydrodipicolin 82.9 22 0.00074 30.5 14.7 107 53-212 41-152 (315)
40 3s5o_A 4-hydroxy-2-oxoglutarat 82.1 23 0.00077 30.2 12.9 107 53-212 33-146 (307)
41 3m47_A Orotidine 5'-phosphate 82.0 16 0.00055 29.8 10.9 99 50-203 73-171 (228)
42 3cpr_A Dihydrodipicolinate syn 82.0 23 0.00078 30.1 14.8 107 53-212 35-146 (304)
43 2yxg_A DHDPS, dihydrodipicolin 81.9 22 0.00076 29.9 14.7 46 53-104 19-65 (289)
44 3fa4_A 2,3-dimethylmalate lyas 81.5 1.4 4.7E-05 38.3 4.3 35 170-204 172-206 (302)
45 3fkr_A L-2-keto-3-deoxyarabona 81.5 24 0.00083 30.1 14.9 46 53-104 27-73 (309)
46 1f6k_A N-acetylneuraminate lya 81.4 23 0.0008 29.8 14.1 46 53-104 22-69 (293)
47 1o5k_A DHDPS, dihydrodipicolin 81.3 24 0.00083 30.0 14.3 46 53-104 31-77 (306)
48 3l21_A DHDPS, dihydrodipicolin 80.8 25 0.00086 29.9 14.2 107 53-212 34-145 (304)
49 3m5v_A DHDPS, dihydrodipicolin 80.3 26 0.00088 29.7 15.0 107 53-212 26-138 (301)
50 3ble_A Citramalate synthase fr 79.3 25 0.00087 30.3 11.8 40 168-207 169-211 (337)
51 3vav_A 3-methyl-2-oxobutanoate 79.3 2.2 7.6E-05 36.5 4.8 40 162-203 168-207 (275)
52 1f8m_A Isocitrate lyase, ICL; 79.0 2.3 7.9E-05 38.6 5.1 34 171-205 270-304 (429)
53 2wkj_A N-acetylneuraminate lya 78.8 29 0.001 29.4 14.2 46 53-104 30-76 (303)
54 3eb2_A Putative dihydrodipicol 77.0 33 0.0011 29.0 13.8 47 53-105 23-70 (300)
55 3e96_A Dihydrodipicolinate syn 76.8 34 0.0012 29.2 13.3 47 53-105 31-78 (316)
56 3d0c_A Dihydrodipicolinate syn 76.8 34 0.0012 29.1 14.0 106 53-212 31-141 (314)
57 2ekc_A AQ_1548, tryptophan syn 76.8 18 0.00061 30.0 9.7 36 173-209 114-149 (262)
58 2cw6_A Hydroxymethylglutaryl-C 76.2 34 0.0012 28.8 12.5 105 64-207 89-198 (298)
59 1to3_A Putative aldolase YIHT; 74.3 38 0.0013 28.8 11.4 46 168-213 177-227 (304)
60 3uhf_A Glutamate racemase; str 72.9 8 0.00027 32.8 6.6 48 161-212 66-114 (274)
61 3out_A Glutamate racemase; str 71.6 12 0.0004 31.5 7.3 50 161-213 49-99 (268)
62 1zuw_A Glutamate racemase 1; ( 71.2 37 0.0013 28.2 10.4 50 161-213 45-95 (272)
63 2r91_A 2-keto-3-deoxy-(6-phosp 70.5 46 0.0016 27.8 14.5 104 53-212 17-126 (286)
64 3vk5_A MOEO5; TIM barrel, tran 69.7 8 0.00027 33.2 5.8 45 172-216 57-104 (286)
65 2oho_A Glutamate racemase; iso 69.1 41 0.0014 27.8 10.2 50 161-213 54-103 (273)
66 1w3i_A EDA, 2-keto-3-deoxy glu 68.9 51 0.0018 27.7 13.2 104 53-212 18-127 (293)
67 3igs_A N-acetylmannosamine-6-p 67.7 37 0.0013 27.6 9.5 25 51-75 32-56 (232)
68 1m3u_A 3-methyl-2-oxobutanoate 67.0 6.1 0.00021 33.5 4.5 39 162-202 156-194 (264)
69 2nuw_A 2-keto-3-deoxygluconate 66.6 57 0.0019 27.3 13.0 104 53-212 18-127 (288)
70 2gzm_A Glutamate racemase; enz 66.4 21 0.00072 29.6 7.8 50 161-213 45-94 (267)
71 3noy_A 4-hydroxy-3-methylbut-2 66.3 8.9 0.00031 34.0 5.6 43 170-214 48-90 (366)
72 3rmj_A 2-isopropylmalate synth 64.2 74 0.0025 27.8 11.7 40 168-207 157-199 (370)
73 16pk_A PGK, 3-phosphoglycerate 64.1 13 0.00043 33.7 6.2 72 2-78 211-291 (415)
74 3vni_A Xylose isomerase domain 64.1 52 0.0018 26.6 9.8 40 163-203 127-174 (294)
75 3dz1_A Dihydrodipicolinate syn 63.8 68 0.0023 27.2 13.9 46 53-104 27-73 (313)
76 1o66_A 3-methyl-2-oxobutanoate 63.6 7.2 0.00025 33.3 4.3 34 168-202 161-194 (275)
77 2jfz_A Glutamate racemase; cel 63.2 18 0.00061 29.8 6.7 50 161-213 42-91 (255)
78 1qop_A Tryptophan synthase alp 61.9 48 0.0017 27.3 9.2 36 173-209 114-149 (268)
79 1v6s_A Phosphoglycerate kinase 61.7 12 0.00042 33.5 5.6 65 2-71 190-257 (390)
80 2yv4_A Hypothetical protein PH 61.7 13 0.00045 26.7 4.9 47 162-208 53-99 (105)
81 1o66_A 3-methyl-2-oxobutanoate 61.5 35 0.0012 29.0 8.3 43 162-212 93-135 (275)
82 1oy0_A Ketopantoate hydroxymet 61.5 5.4 0.00018 34.2 3.1 34 168-202 179-212 (281)
83 2vvt_A Glutamate racemase; iso 61.1 29 0.001 29.2 7.8 50 161-213 66-115 (290)
84 3h5d_A DHDPS, dihydrodipicolin 60.8 77 0.0026 26.9 14.2 107 53-212 26-138 (311)
85 2jfq_A Glutamate racemase; cel 58.9 29 0.001 29.1 7.4 50 161-213 64-113 (286)
86 2hmc_A AGR_L_411P, dihydrodipi 58.6 90 0.0031 27.0 13.8 42 53-100 45-87 (344)
87 1php_A 3-phosphoglycerate kina 56.7 12 0.00043 33.5 4.8 72 2-78 193-273 (394)
88 3q58_A N-acetylmannosamine-6-p 56.3 71 0.0024 25.9 9.1 25 51-75 32-56 (229)
89 3oz7_A Phosphoglycerate kinase 56.2 25 0.00086 31.7 6.7 66 2-72 213-282 (417)
90 2dwu_A Glutamate racemase; iso 55.5 26 0.00088 29.2 6.4 50 161-213 49-98 (276)
91 3f4w_A Putative hexulose 6 pho 55.2 23 0.00078 27.7 5.8 38 174-211 70-107 (211)
92 4ed9_A CAIB/BAIF family protei 54.6 24 0.00081 31.3 6.3 39 51-94 82-120 (385)
93 1b73_A Glutamate racemase; iso 54.6 25 0.00084 28.9 6.1 50 161-213 42-91 (254)
94 1vpe_A Phosphoglycerate kinase 54.3 13 0.00045 33.3 4.5 71 2-77 192-271 (398)
95 3ubm_A COAT2, formyl-COA:oxala 53.6 31 0.0011 31.3 7.0 40 50-94 99-138 (456)
96 1fw8_A PGK P72, phosphoglycera 52.6 18 0.00061 32.7 5.1 61 2-70 139-206 (416)
97 2p10_A MLL9387 protein; putati 51.9 39 0.0014 28.9 7.0 93 9-108 110-224 (286)
98 3ojc_A Putative aspartate/glut 51.2 27 0.00091 28.4 5.7 94 88-212 10-103 (231)
99 1pv8_A Delta-aminolevulinic ac 48.6 9.7 0.00033 33.3 2.6 25 51-75 294-318 (330)
100 3ewb_X 2-isopropylmalate synth 47.3 1.3E+02 0.0043 25.3 12.6 40 168-207 150-192 (293)
101 4dpp_A DHDPS 2, dihydrodipicol 47.3 1.5E+02 0.005 26.0 13.3 46 53-104 78-124 (360)
102 2ztj_A Homocitrate synthase; ( 47.2 1.4E+02 0.0049 25.9 12.2 107 53-206 76-185 (382)
103 1h7n_A 5-aminolaevulinic acid 47.2 10 0.00035 33.3 2.6 25 51-75 305-329 (342)
104 1w1z_A Delta-aminolevulinic ac 47.2 11 0.00037 32.9 2.7 25 51-75 294-318 (328)
105 4af0_A Inosine-5'-monophosphat 46.9 36 0.0012 31.8 6.4 42 170-211 282-325 (556)
106 1l6s_A Porphobilinogen synthas 46.8 11 0.00037 32.9 2.7 26 45-75 286-311 (323)
107 1aj0_A DHPS, dihydropteroate s 46.3 75 0.0026 26.8 7.9 63 133-206 14-85 (282)
108 2inf_A URO-D, UPD, uroporphyri 46.2 1.4E+02 0.0046 25.5 9.8 42 59-108 197-239 (359)
109 2nx9_A Oxaloacetate decarboxyl 46.1 1.7E+02 0.0058 26.4 13.2 44 168-211 158-204 (464)
110 3obk_A Delta-aminolevulinic ac 44.9 12 0.00041 33.0 2.6 25 51-75 308-332 (356)
111 3l0g_A Nicotinate-nucleotide p 44.5 26 0.0009 30.2 4.7 31 173-204 219-249 (300)
112 2jfn_A Glutamate racemase; cel 43.6 85 0.0029 26.1 7.8 50 161-213 63-113 (285)
113 3usb_A Inosine-5'-monophosphat 43.4 78 0.0027 28.9 8.1 87 62-212 262-363 (511)
114 3nvt_A 3-deoxy-D-arabino-heptu 42.9 92 0.0031 27.5 8.2 46 162-212 154-210 (385)
115 1j93_A UROD, uroporphyrinogen 42.8 1.5E+02 0.005 25.1 9.4 43 59-109 197-240 (353)
116 3jr2_A Hexulose-6-phosphate sy 42.6 32 0.0011 27.3 4.8 37 174-210 76-112 (218)
117 2cun_A Phosphoglycerate kinase 42.2 14 0.00048 33.3 2.7 69 2-73 196-271 (410)
118 3eeg_A 2-isopropylmalate synth 41.8 60 0.0021 27.8 6.7 40 168-207 151-193 (325)
119 4dnh_A Uncharacterized protein 41.2 1.2E+02 0.0042 26.7 8.4 27 160-186 129-155 (396)
120 4fey_A Phosphoglycerate kinase 40.8 22 0.00075 31.9 3.8 66 2-72 192-260 (395)
121 3q3v_A Phosphoglycerate kinase 40.4 30 0.001 31.1 4.6 66 2-72 200-268 (403)
122 2yim_A Probable alpha-methylac 40.1 57 0.0019 28.5 6.4 41 49-94 59-99 (360)
123 1m3u_A 3-methyl-2-oxobutanoate 40.0 1E+02 0.0035 25.9 7.7 43 162-212 92-134 (264)
124 2eja_A URO-D, UPD, uroporphyri 39.7 1.7E+02 0.0058 24.6 9.7 52 50-109 163-226 (338)
125 1geq_A Tryptophan synthase alp 39.0 26 0.00088 28.2 3.7 39 171-210 98-136 (248)
126 1tx2_A DHPS, dihydropteroate s 38.6 1.2E+02 0.0041 25.8 8.0 69 133-212 39-119 (297)
127 1vrd_A Inosine-5'-monophosphat 38.4 63 0.0021 29.0 6.6 44 170-213 238-283 (494)
128 1qpg_A PGK, 3-phosphoglycerate 38.4 35 0.0012 30.8 4.7 40 2-42 209-252 (415)
129 1p1x_A Deoxyribose-phosphate a 38.3 17 0.00058 30.6 2.5 30 49-78 144-174 (260)
130 4fo4_A Inosine 5'-monophosphat 38.2 50 0.0017 29.0 5.7 43 170-212 109-153 (366)
131 2xz9_A Phosphoenolpyruvate-pro 37.9 45 0.0016 28.7 5.3 39 167-205 118-162 (324)
132 2uwf_A Endoxylanase, alkaline 37.7 1.5E+02 0.005 25.7 8.7 46 167-213 201-253 (356)
133 3ivs_A Homocitrate synthase, m 37.4 1.8E+02 0.0063 25.9 9.4 41 170-210 182-225 (423)
134 3r2g_A Inosine 5'-monophosphat 37.2 1.4E+02 0.0047 26.2 8.4 27 51-77 95-121 (361)
135 3tqv_A Nicotinate-nucleotide p 37.1 40 0.0014 28.8 4.7 31 173-204 210-240 (287)
136 1jub_A Dihydroorotate dehydrog 36.0 53 0.0018 27.4 5.4 47 169-215 107-165 (311)
137 2wx4_A DCP1, decapping protein 35.8 11 0.00037 23.5 0.6 17 51-67 23-39 (46)
138 1q7e_A Hypothetical protein YF 35.7 67 0.0023 28.8 6.2 40 50-94 75-114 (428)
139 1r85_A Endo-1,4-beta-xylanase; 35.5 1.3E+02 0.0043 26.4 7.9 45 168-213 212-263 (379)
140 3bg3_A Pyruvate carboxylase, m 35.4 3E+02 0.01 26.3 12.8 40 168-207 261-303 (718)
141 4fxs_A Inosine-5'-monophosphat 35.1 76 0.0026 28.8 6.6 42 171-212 233-276 (496)
142 3ffs_A Inosine-5-monophosphate 34.5 40 0.0014 30.1 4.5 42 171-212 146-188 (400)
143 2wx3_A MRNA-decapping enzyme 1 34.4 21 0.00072 22.7 1.9 18 50-67 24-41 (51)
144 3u0h_A Xylose isomerase domain 33.9 1.6E+02 0.0055 23.1 7.9 28 163-191 117-144 (281)
145 2vws_A YFAU, 2-keto-3-deoxy su 33.7 37 0.0013 28.2 3.9 33 172-204 81-113 (267)
146 3hgj_A Chromate reductase; TIM 33.4 2.3E+02 0.0077 24.2 9.5 24 161-188 236-259 (349)
147 2a4a_A Deoxyribose-phosphate a 33.3 19 0.00064 30.8 2.0 30 49-78 166-196 (281)
148 2eqa_A Hypothetical protein ST 33.1 86 0.0029 27.4 6.3 47 162-208 290-336 (352)
149 1ub3_A Aldolase protein; schif 32.8 33 0.0011 27.9 3.4 26 53-78 131-157 (220)
150 2ze3_A DFA0005; organic waste 32.6 2E+02 0.0067 24.1 8.4 33 174-206 98-138 (275)
151 1o4u_A Type II quinolic acid p 31.8 70 0.0024 27.1 5.4 31 174-205 206-236 (285)
152 4eiv_A Deoxyribose-phosphate a 31.3 40 0.0014 29.0 3.8 28 49-76 160-187 (297)
153 2v5j_A 2,4-dihydroxyhept-2-ENE 30.9 40 0.0014 28.5 3.7 32 173-204 103-134 (287)
154 1rqb_A Transcarboxylase 5S sub 30.7 3.2E+02 0.011 25.2 12.7 40 168-207 175-217 (539)
155 1eye_A DHPS 1, dihydropteroate 30.5 1.5E+02 0.0051 24.9 7.2 68 133-211 5-83 (280)
156 3khj_A Inosine-5-monophosphate 30.3 74 0.0025 27.7 5.5 42 171-212 107-149 (361)
157 1qpo_A Quinolinate acid phosph 30.3 73 0.0025 26.9 5.3 33 172-205 205-237 (284)
158 3r2g_A Inosine 5'-monophosphat 30.0 82 0.0028 27.6 5.7 44 170-213 101-146 (361)
159 4hb7_A Dihydropteroate synthas 29.8 1.5E+02 0.0052 24.9 7.1 69 133-212 6-83 (270)
160 3ixl_A Amdase, arylmalonate de 29.4 1.1E+02 0.0038 24.7 6.2 54 160-213 42-103 (240)
161 4g9p_A 4-hydroxy-3-methylbut-2 28.7 75 0.0026 28.5 5.2 43 170-213 40-86 (406)
162 3sig_A PArg, poly(ADP-ribose) 28.6 2.3E+02 0.0078 23.9 8.0 68 91-191 189-259 (277)
163 3cpr_A Dihydrodipicolinate syn 28.2 1.2E+02 0.0041 25.5 6.3 49 160-212 33-89 (304)
164 3a5f_A Dihydrodipicolinate syn 27.7 1.1E+02 0.0037 25.5 5.9 48 161-212 19-74 (291)
165 3w01_A Heptaprenylglyceryl pho 27.7 80 0.0028 26.0 4.9 35 177-212 32-68 (235)
166 2zsk_A PH1733, 226AA long hypo 27.7 74 0.0025 25.3 4.7 48 162-213 54-101 (226)
167 4h3d_A 3-dehydroquinate dehydr 27.5 67 0.0023 26.6 4.5 50 162-215 30-85 (258)
168 2eq5_A 228AA long hypothetical 27.5 1.1E+02 0.0039 23.9 5.8 40 169-213 63-102 (228)
169 3vzx_A Heptaprenylglyceryl pho 27.3 69 0.0023 26.3 4.4 39 174-213 24-64 (228)
170 3noy_A 4-hydroxy-3-methylbut-2 27.2 3.2E+02 0.011 24.0 9.0 75 131-212 133-208 (366)
171 1p90_A NAFY protein, hypotheti 27.1 40 0.0014 25.4 2.8 13 131-143 67-79 (145)
172 3erp_A Putative oxidoreductase 27.0 2.9E+02 0.0098 23.4 8.9 117 53-207 62-181 (353)
173 2h6r_A Triosephosphate isomera 26.6 1.3E+02 0.0043 24.0 5.9 37 176-212 77-116 (219)
174 1izc_A Macrophomate synthase i 26.5 55 0.0019 28.4 3.9 34 172-205 108-141 (339)
175 2qul_A D-tagatose 3-epimerase; 26.5 2.4E+02 0.0081 22.3 9.2 40 163-203 128-175 (290)
176 1dqu_A Isocitrate lyase; beta 26.4 58 0.002 30.3 4.2 28 180-207 387-415 (538)
177 3exr_A RMPD (hexulose-6-phosph 26.1 1.2E+02 0.0041 24.3 5.7 34 177-210 78-111 (221)
178 2hk0_A D-psicose 3-epimerase; 26.0 2.6E+02 0.0089 22.6 9.5 39 164-203 147-193 (309)
179 1xky_A Dihydrodipicolinate syn 25.9 1.2E+02 0.0042 25.4 5.9 49 160-212 29-85 (301)
180 2r14_A Morphinone reductase; H 25.7 3.3E+02 0.011 23.6 9.3 43 170-212 257-303 (377)
181 3txv_A Probable tagatose 6-pho 25.6 3.7E+02 0.013 24.3 9.3 23 161-183 195-217 (450)
182 4avf_A Inosine-5'-monophosphat 25.5 1.7E+02 0.0058 26.4 7.1 44 170-213 230-275 (490)
183 3b4u_A Dihydrodipicolinate syn 25.4 1.2E+02 0.004 25.4 5.7 49 160-212 20-76 (294)
184 3paj_A Nicotinate-nucleotide p 25.4 82 0.0028 27.3 4.7 30 174-204 244-273 (320)
185 2wkj_A N-acetylneuraminate lya 25.3 1.2E+02 0.0041 25.5 5.8 49 160-212 28-84 (303)
186 2vjq_A Formyl-coenzyme A trans 25.3 91 0.0031 28.0 5.2 40 50-94 73-112 (428)
187 1a0c_A Xylose isomerase; ketol 25.2 2.3E+02 0.0078 25.2 7.9 39 165-203 207-256 (438)
188 1rd5_A Tryptophan synthase alp 25.2 1.2E+02 0.0041 24.5 5.6 43 170-212 34-98 (262)
189 2ojp_A DHDPS, dihydrodipicolin 25.1 1.1E+02 0.0038 25.5 5.5 49 160-212 18-74 (292)
190 1r3s_A URO-D, uroporphyrinogen 25.1 3.2E+02 0.011 23.2 10.4 52 50-109 181-244 (367)
191 2vc6_A MOSA, dihydrodipicolina 25.0 1.1E+02 0.0036 25.6 5.4 49 160-212 17-73 (292)
192 3emz_A Xylanase, endo-1,4-beta 25.0 3.2E+02 0.011 23.3 9.0 44 168-212 187-237 (331)
193 1o5k_A DHDPS, dihydrodipicolin 24.9 1.3E+02 0.0045 25.3 5.9 49 160-212 29-85 (306)
194 1vcv_A Probable deoxyribose-ph 24.9 63 0.0022 26.4 3.8 26 50-76 124-149 (226)
195 1qop_A Tryptophan synthase alp 24.6 1.6E+02 0.0054 24.1 6.3 42 171-212 34-98 (268)
196 1e0t_A Pyruvate kinase, PK; ph 24.5 1.7E+02 0.0057 26.7 6.8 61 137-206 149-210 (470)
197 2ehh_A DHDPS, dihydrodipicolin 24.4 1.3E+02 0.0044 25.1 5.8 49 160-212 17-73 (294)
198 2dep_A Xylanase B, thermostabl 24.4 3.3E+02 0.011 23.2 9.2 45 168-213 201-252 (356)
199 3gnn_A Nicotinate-nucleotide p 24.3 91 0.0031 26.7 4.8 29 174-203 222-250 (298)
200 4fb5_A Probable oxidoreductase 24.1 1E+02 0.0035 25.8 5.2 38 169-207 106-145 (393)
201 3l5a_A NADH/flavin oxidoreduct 24.0 3.7E+02 0.013 23.7 9.4 104 55-188 163-285 (419)
202 3ip3_A Oxidoreductase, putativ 23.9 1.3E+02 0.0045 25.1 5.8 40 169-209 79-120 (337)
203 3gr4_A Pyruvate kinase isozyme 23.7 2.4E+02 0.0082 26.2 7.8 66 134-208 216-282 (550)
204 3eau_A Voltage-gated potassium 23.6 3.1E+02 0.011 22.7 9.3 113 53-207 31-146 (327)
205 4ay7_A Methylcobalamin\: coenz 23.5 3.3E+02 0.011 22.9 11.2 47 51-103 175-233 (348)
206 2e28_A Pyruvate kinase, PK; al 23.3 1E+02 0.0035 28.9 5.3 42 161-207 171-212 (587)
207 4dpp_A DHDPS 2, dihydrodipicol 23.2 1.3E+02 0.0046 26.2 5.8 49 160-212 76-132 (360)
208 2yxg_A DHDPS, dihydrodipicolin 23.2 1.4E+02 0.0049 24.8 5.8 49 160-212 17-73 (289)
209 4ew6_A D-galactose-1-dehydroge 23.1 1.4E+02 0.0049 24.9 5.9 38 169-207 93-132 (330)
210 2f6u_A GGGPS, (S)-3-O-geranylg 22.9 1.2E+02 0.0041 24.8 5.1 38 174-212 26-65 (234)
211 3cc1_A BH1870 protein, putativ 22.7 1.4E+02 0.0047 26.5 5.9 52 162-214 158-216 (433)
212 3lut_A Voltage-gated potassium 22.7 3.5E+02 0.012 22.9 9.3 113 53-207 65-180 (367)
213 2rfg_A Dihydrodipicolinate syn 22.6 1.4E+02 0.0048 25.0 5.6 49 160-212 17-73 (297)
214 2v9d_A YAGE; dihydrodipicolini 22.2 1.3E+02 0.0045 25.8 5.5 49 160-212 48-104 (343)
215 1z41_A YQJM, probable NADH-dep 22.2 3.5E+02 0.012 22.7 13.5 56 160-215 133-216 (338)
216 3tak_A DHDPS, dihydrodipicolin 22.1 1.4E+02 0.0049 24.8 5.6 49 160-212 18-74 (291)
217 1eix_A Orotidine 5'-monophosph 22.0 71 0.0024 26.0 3.6 30 50-79 74-103 (245)
218 2wzb_A Phosphoglycerate kinase 22.0 37 0.0012 30.6 1.9 40 2-42 211-254 (416)
219 3fkr_A L-2-keto-3-deoxyarabona 21.8 1.4E+02 0.0048 25.2 5.5 49 160-212 25-81 (309)
220 3e82_A Putative oxidoreductase 21.6 1.3E+02 0.0046 25.5 5.5 37 170-207 80-118 (364)
221 3hgj_A Chromate reductase; TIM 21.6 3.7E+02 0.013 22.8 11.8 94 88-207 141-252 (349)
222 1f6k_A N-acetylneuraminate lya 21.5 1.7E+02 0.0057 24.4 5.9 49 160-212 20-77 (293)
223 1dxe_A 2-dehydro-3-deoxy-galac 21.5 60 0.0021 26.6 3.0 31 174-204 84-114 (256)
224 1zmr_A Phosphoglycerate kinase 21.4 98 0.0034 27.6 4.5 40 2-42 189-231 (387)
225 2r8w_A AGR_C_1641P; APC7498, d 21.3 1.4E+02 0.0046 25.6 5.4 49 160-212 51-107 (332)
226 3k2g_A Resiniferatoxin-binding 21.3 1.7E+02 0.0058 25.3 6.1 27 50-76 81-107 (364)
227 3inp_A D-ribulose-phosphate 3- 21.3 56 0.0019 27.1 2.8 42 171-212 43-90 (246)
228 3o9z_A Lipopolysaccaride biosy 21.2 1.5E+02 0.005 24.7 5.5 38 169-207 84-123 (312)
229 1lc0_A Biliverdin reductase A; 21.2 1.6E+02 0.0054 24.3 5.7 38 169-207 77-116 (294)
230 3si9_A DHDPS, dihydrodipicolin 21.2 1.7E+02 0.0057 24.8 5.9 49 160-212 39-95 (315)
231 3qxb_A Putative xylose isomera 21.1 1.8E+02 0.0062 23.7 6.1 43 165-207 155-204 (316)
232 1xk7_A Crotonobetainyl-COA:car 21.1 1.1E+02 0.0036 27.2 4.8 40 50-94 75-114 (408)
233 3qz6_A HPCH/HPAI aldolase; str 21.1 72 0.0025 26.4 3.5 32 173-204 80-111 (261)
234 3s5o_A 4-hydroxy-2-oxoglutarat 21.1 1.5E+02 0.005 25.0 5.5 49 160-212 31-87 (307)
235 1dbt_A Orotidine 5'-phosphate 21.0 58 0.002 26.3 2.8 30 50-79 63-92 (239)
236 3c01_A Surface presentation of 21.0 86 0.0029 19.5 2.9 20 56-75 22-48 (48)
237 4ef8_A Dihydroorotate dehydrog 20.8 1.3E+02 0.0044 26.2 5.2 43 173-215 144-200 (354)
238 3uuw_A Putative oxidoreductase 20.8 1.6E+02 0.0054 24.1 5.6 37 170-207 79-117 (308)
239 1vkf_A Glycerol uptake operon 20.8 46 0.0016 26.6 2.1 24 49-77 156-179 (188)
240 3qtg_A Pyruvate kinase, PK; TI 20.7 1.8E+02 0.0061 26.5 6.2 67 134-209 155-224 (461)
241 2e6f_A Dihydroorotate dehydrog 20.4 81 0.0028 26.3 3.7 46 170-215 108-167 (314)
242 2xed_A Putative maleate isomer 20.4 1.4E+02 0.0047 24.7 5.1 31 161-191 67-100 (273)
243 1wx1_A Nicotinate-nucleotide-- 20.3 1.6E+02 0.0056 25.5 5.7 37 89-144 131-167 (335)
244 3na8_A Putative dihydrodipicol 20.2 1.7E+02 0.0057 24.8 5.7 49 160-212 41-97 (315)
245 3oix_A Putative dihydroorotate 20.1 1.6E+02 0.0053 25.5 5.5 46 170-215 143-200 (345)
246 2yyu_A Orotidine 5'-phosphate 20.0 76 0.0026 25.8 3.3 30 50-79 64-93 (246)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=4.9e-44 Score=326.50 Aligned_cols=173 Identities=23% Similarity=0.335 Sum_probs=148.8
Q ss_pred hHHHHHHhccCCeEEEecchHHHHHHCCCCCCCccccccccCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCC
Q 027947 10 SFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGF 89 (216)
Q Consensus 10 ~~l~~~l~~~~~~lllDGg~gT~L~~~g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~ 89 (216)
..|.+.|++ ++++||||||||+|+++|++.. ++|++.+++++||.|+++|++|++||||||+||||++|+.+|.++|+
T Consensus 11 ~~l~~~L~~-~~ilIlDGgmGT~L~~~G~~~~-~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~ 88 (406)
T 1lt8_A 11 KGILERLNA-GEIVIGDGGFVFALEKRGYVKA-GPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGN 88 (406)
T ss_dssp CCHHHHHHT-TCCEECCCCHHHHHHHHTSSCT-TTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC------
T ss_pred HHHHHHHhc-CCEEEEeCccchHHHHCCCCCC-cccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCC
Confidence 468888984 3599999999999999999853 58999999999999999999999999999999999999999999997
Q ss_pred CH---HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHH
Q 027947 90 ST---EEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166 (216)
Q Consensus 90 ~~---~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~ 166 (216)
+. +++++||++||+|||+|++. .+++|||||||+|.++. .++++++
T Consensus 89 ~~~~~~~~~eln~~Av~LAreAa~~--------------------~~~~VAGsIGP~g~~l~-----------~~s~eel 137 (406)
T 1lt8_A 89 YVLEKISGQEVNEAAADIARQVADE--------------------GDALVAGGVSQTPSYLS-----------AKSETEV 137 (406)
T ss_dssp -------CHHHHHHHHHHHHHHHTT--------------------TTCEEEEEECCCHHHHT-----------TCHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhc--------------------CCCEEEEEcCCcccccC-----------CCCHHHH
Confidence 52 45789999999999999842 25899999999998652 3799999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccccccC
Q 027947 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLKKFV 216 (216)
Q Consensus 167 ~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~~~~ 216 (216)
+++|++|+++|+++|||+|++||||++.|++++++++++.+ +|+..+|.
T Consensus 138 ~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~-lPv~iS~T 186 (406)
T 1lt8_A 138 KKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG-KPVAATMA 186 (406)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT-SCEEEEEC
T ss_pred HHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC-CcEEEEEE
Confidence 99999999999999999999999999999999999999865 99999884
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1.6e-41 Score=321.46 Aligned_cols=170 Identities=26% Similarity=0.397 Sum_probs=155.6
Q ss_pred hHHHHHHhccCCeEEEecchHHHHHHCCCCCCCccccccccCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCC
Q 027947 10 SFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGF 89 (216)
Q Consensus 10 ~~l~~~l~~~~~~lllDGg~gT~L~~~g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~ 89 (216)
..|++.|+ ++++|+||||||+|+++|++..+++|+ +++||.|+++|++|++||||||+|||||+|+.+|.++|+
T Consensus 5 ~~l~~~l~--~~ililDGamGT~L~~~g~~~~~el~~----l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~ 78 (566)
T 1q7z_A 5 REVSKLLS--ERVLLLDGAYGTEFMKYGYDDLPEELN----IKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGL 78 (566)
T ss_dssp HHHHHHHH--HCCEECCCCSHHHHHHTTCCSCGGGHH----HHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTC
T ss_pred hHHHHHHc--CCeEEEEChHHHHHHHCCCCCCchhhc----ccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCc
Confidence 56888887 479999999999999999987778897 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHH
Q 027947 90 STEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169 (216)
Q Consensus 90 ~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~ 169 (216)
+ ++++++|++||++||+|++ . + +|+|||||+|++++ .|+ .+++++++++
T Consensus 79 ~-~~~~el~~~av~lAr~a~~--------------------~-~-~VAGsiGP~g~~~~-------~~~-~~~~~e~~~~ 127 (566)
T 1q7z_A 79 E-DKLDPIVRNAVRIARRAAG--------------------E-K-LVFGDIGPTGELPY-------PLG-STLFEEFYEN 127 (566)
T ss_dssp G-GGHHHHHHHHHHHHHHHHT--------------------T-S-EEEEEECCCSCCBT-------TTS-SBCHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHHHHh--------------------C-C-eEEEeCCCcccCCC-------CCC-CCCHHHHHHH
Confidence 7 7799999999999999983 1 4 99999999999763 243 4899999999
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHh-CCcccccccC
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIIN-QRKMLLKKFV 216 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~-~~~~~~~~~~ 216 (216)
|++|+++|+++|||+|++||||++.|+++++.++++. ..+|+..+|.
T Consensus 128 ~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t 175 (566)
T 1q7z_A 128 FRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMT 175 (566)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999999999999999999999999999999999985 6899999984
No 3
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=94.61 E-value=2.3 Score=38.75 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCEEEEecC-CCHHHHHHHHHHHHH
Q 027947 171 RRRVLILANSGADLIAFETI-PNKLEAKVFSKYVII 205 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~a~~~ 205 (216)
-.|.+++.+ |+|+|++|+. |++.|++.++++++.
T Consensus 269 I~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 269 IARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 456788888 9999999996 899999999999985
No 4
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.85 E-value=1.7 Score=37.09 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
+.-.++++++.++|+|+|++|.+|+..|++.+.+.+.
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 168 AETVRRGQAYADAGADGIFVPLALQSQDIRALADALR 204 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC
Confidence 4455688999999999999999999999998888764
No 5
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=92.48 E-value=2.5 Score=38.57 Aligned_cols=34 Identities=38% Similarity=0.258 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCEEEEec-CCCHHHHHHHHHHHHH
Q 027947 171 RRRVLILANSGADLIAFET-IPNKLEAKVFSKYVII 205 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~a~~~ 205 (216)
-.|.+++.+ |+|+|++|+ .+++.|++.++++++.
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~ 308 (439)
T 3i4e_A 274 ISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHK 308 (439)
T ss_dssp HHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 456788888 999999999 6899999999999985
No 6
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=91.62 E-value=3 Score=37.98 Aligned_cols=34 Identities=38% Similarity=0.273 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCEEEEecC-CCHHHHHHHHHHHHH
Q 027947 171 RRRVLILANSGADLIAFETI-PNKLEAKVFSKYVII 205 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~a~~~ 205 (216)
-.|.+++.+ |+|+|++|+. |++.|++.++++++.
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~ 308 (435)
T 3lg3_A 274 ISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHA 308 (435)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 356788888 9999999996 899999999999985
No 7
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.36 E-value=0.2 Score=43.47 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.--+|++++.++|+|+|++|.+++..|++.+++.+. .|++
T Consensus 171 deai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~ 211 (298)
T 3eoo_A 171 DAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPIL 211 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBE
T ss_pred HHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeE
Confidence 3345688999999999999999999999999998874 5653
No 8
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.08 E-value=0.16 Score=44.59 Aligned_cols=41 Identities=27% Similarity=0.166 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.-.++++++.++|+|+|++|.+|+..|++.+.+.+. .|++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~----~P~l 229 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTK----GLRI 229 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSC----SEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcC----CCEE
Confidence 3455688999999999999999999999999888774 5663
No 9
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.07 E-value=0.22 Score=43.12 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCCCCEEEEec-CCCHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFET-IPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
-.++++++.++|+|+|++|+ +|+..|++.+.+.++ ...|++
T Consensus 172 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~~P~i 213 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWN--NQGPVV 213 (295)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT--TCSCEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC--CCCCEE
Confidence 44578999999999999998 899999999998886 235654
No 10
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.91 E-value=0.22 Score=43.12 Aligned_cols=40 Identities=20% Similarity=0.203 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 169 FHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
.-.++++++.++|+|+|++|.+|+..+++.+.+.+. .|++
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----iP~~ 207 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ----VPIL 207 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC----SCBE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC----CCEE
Confidence 345678999999999999999999999999988874 5653
No 11
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.27 E-value=0.2 Score=43.31 Aligned_cols=41 Identities=24% Similarity=0.171 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCCCEEEEec-CCCHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFET-IPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
-.++++++.++|+|+|++|. +|+..|++.+.+.+. .+.|++
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~vP~i 209 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP--GKVPLV 209 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC--CSSCEE
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC--CCCCEE
Confidence 34578999999999999999 999999998888774 235655
No 12
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.86 E-value=0.26 Score=42.89 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=32.9
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
-.+|++++.++|+|+|++|.+++..|++.+.+.+. .|++
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~----~P~~ 215 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEALQSEEEFRLFNSKVN----APLL 215 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSC----SCBE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcC----CCEE
Confidence 45678999999999999999999999998888763 5664
No 13
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=89.05 E-value=0.47 Score=41.32 Aligned_cols=40 Identities=23% Similarity=0.140 Sum_probs=33.9
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
--+|++++.++|+|+|++|-+++..|++.+++.+. ..|++
T Consensus 180 Ai~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~ 219 (307)
T 3lye_A 180 CIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLL 219 (307)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBE
T ss_pred HHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCcee
Confidence 45678999999999999999999999999988885 35653
No 14
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.86 E-value=6.8 Score=33.32 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=68.6
Q ss_pred CChHHHHHHHHHHHHhcCCeeeccccccCHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 027947 52 SSPHLVRKVHLDYLDAGANIIITASYQATIQ-GFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (216)
Q Consensus 52 ~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~-~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~ 130 (216)
.+.+.|+.. +++|++.|.... .+|.. .-...+.+.++.-+..+..|+.|++.
T Consensus 84 ~~~~~i~~a----~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~---------------------- 136 (302)
T 2ftp_A 84 PNLKGFEAA----LESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQH---------------------- 136 (302)
T ss_dssp CSHHHHHHH----HHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CCHHHHHHH----HhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------
Confidence 455555543 568999776432 22222 22345667666656666666665542
Q ss_pred CCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec---CCCHHHHHHHHHHHHHhC
Q 027947 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~a~~~~~ 207 (216)
.+.|-+.|+-...+ ||.+ ..+++.+.++ ++.+.+.|+|.|.+=+ +-...+....++.+++.-
T Consensus 137 --G~~V~~~l~~~~~~-----e~~~----~~~~~~~~~~----~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 137 --QVRVRGYISCVLGC-----PYDG----DVDPRQVAWV----ARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp --TCEEEEEEECTTCB-----TTTB----CCCHHHHHHH----HHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred --CCeEEEEEEEEeeC-----CcCC----CCCHHHHHHH----HHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 23466666653221 2222 2466655555 7778889999997663 246778888888887654
Q ss_pred -Cccc
Q 027947 208 -RKML 211 (216)
Q Consensus 208 -~~~~ 211 (216)
+.|+
T Consensus 202 ~~~~l 206 (302)
T 2ftp_A 202 PRERL 206 (302)
T ss_dssp CGGGE
T ss_pred CCCeE
Confidence 3443
No 15
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.45 E-value=1.8 Score=36.76 Aligned_cols=118 Identities=13% Similarity=0.055 Sum_probs=68.5
Q ss_pred ccccCCCh--HHHHHHHHHHHHhcCCeeeccccccCHH-----------HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 027947 47 AKCLVSSP--HLVRKVHLDYLDAGANIIITASYQATIQ-----------GFEAKGFSTEEAEALLRRSVEIACEAREIYY 113 (216)
Q Consensus 47 ~~~ll~~p--e~V~~iH~~Yl~AGadiI~TnTy~a~~~-----------~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~ 113 (216)
.+...-+| +.-.++-+...++|||+|.-...-..|- +.-..|+.. .+..++.++.++.+
T Consensus 24 ~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~-------~~~~~~v~~~r~~~- 95 (271)
T 3nav_A 24 PFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTP-------DICFELIAQIRARN- 95 (271)
T ss_dssp EEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCH-------HHHHHHHHHHHHHC-
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHhcC-
Confidence 33344555 5667788888999999999665433332 112223331 13455666665432
Q ss_pred hhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCH
Q 027947 114 DRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNK 193 (216)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~ 193 (216)
...|+.+- +-++..+. | . ...-++.+.++|||.+++=.+|-
T Consensus 96 ----------------~~~Pivlm---~Y~n~v~~--------~----g-------~~~f~~~~~~aGvdGvIipDlp~- 136 (271)
T 3nav_A 96 ----------------PETPIGLL---MYANLVYA--------R----G-------IDDFYQRCQKAGVDSVLIADVPT- 136 (271)
T ss_dssp ----------------TTSCEEEE---ECHHHHHH--------T----C-------HHHHHHHHHHHTCCEEEETTSCG-
T ss_pred ----------------CCCCEEEE---ecCcHHHH--------H----h-------HHHHHHHHHHCCCCEEEECCCCH-
Confidence 12354433 33322111 1 1 12336677888999999888884
Q ss_pred HHHHHHHHHHHHhCCccc
Q 027947 194 LEAKVFSKYVIINQRKML 211 (216)
Q Consensus 194 ~Ea~a~~~a~~~~~~~~~ 211 (216)
+|....++++++++..++
T Consensus 137 ee~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 137 NESQPFVAAAEKFGIQPI 154 (271)
T ss_dssp GGCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCeEE
Confidence 678888888888875544
No 16
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=88.41 E-value=7.4 Score=36.42 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=73.0
Q ss_pred hHHHHHHHHHH----HHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 027947 54 PHLVRKVHLDY----LDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (216)
Q Consensus 54 pe~V~~iH~~Y----l~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (216)
.+.+++.|++= +++|+|+|.--|+..- .++ ++++..+++..
T Consensus 121 ~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~-----------~Ea----~aa~~a~~~~~-------------------- 165 (566)
T 1q7z_A 121 FEEFYENFRETVEIMVEEGVDGIIFETFSDI-----------LEL----KAAVLAAREVS-------------------- 165 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEECCH-----------HHH----HHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEeccCCH-----------HHH----HHHHHHHHHhC--------------------
Confidence 46777777654 4789999988888532 222 23334433321
Q ss_pred CCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCc
Q 027947 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~ 209 (216)
.+.|++|..++.+-|..+. | .+.+++ +..+...++|.+.+-.-....++..+++.+++..+.
T Consensus 166 ~~~Pv~vS~t~~~~g~~~~-G----------~~~~~~-------~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~~~ 227 (566)
T 1q7z_A 166 RDVFLIAHMTFDEKGRSLT-G----------TDPANF-------AITFDELDIDALGINCSLGPEEILPIFQELSQYTDK 227 (566)
T ss_dssp SSSCEEEEECCCTTSCCTT-S----------CCHHHH-------HHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTCCS
T ss_pred CCCcEEEEEEEcCCCeeCC-C----------CcHHHH-------HHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcCCC
Confidence 2469999999987766542 2 355544 344555799999999987899999999999988777
Q ss_pred ccc
Q 027947 210 MLL 212 (216)
Q Consensus 210 ~~~ 212 (216)
|+.
T Consensus 228 p~~ 230 (566)
T 1q7z_A 228 FLV 230 (566)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 17
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.11 E-value=0.28 Score=42.39 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
-.++++++.++|+|+|++|.+|+..+++.+.+.+. .|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLH----IPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCC----SCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCC----CCEE
Confidence 34578999999999999999999999988887653 5655
No 18
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.68 E-value=12 Score=31.38 Aligned_cols=112 Identities=13% Similarity=0.034 Sum_probs=64.6
Q ss_pred HHHHHhcCCeeeccccccCHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEec
Q 027947 62 LDYLDAGANIIITASYQATIQG-FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140 (216)
Q Consensus 62 ~~Yl~AGadiI~TnTy~a~~~~-l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsi 140 (216)
+..+++|++.|.... .+|... -...+.+.++.-+..+.+|+.|++. .+-|-+.|
T Consensus 86 ~~a~~~G~~~V~i~~-~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~------------------------G~~V~~~l 140 (295)
T 1ydn_A 86 EAAAAAHADEIAVFI-SASEGFSKANINCTIAESIERLSPVIGAAIND------------------------GLAIRGYV 140 (295)
T ss_dssp HHHHHTTCSEEEEEE-ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEE
T ss_pred HHHHHCCCCEEEEEE-ecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc------------------------CCeEEEEE
Confidence 346778999776532 223222 2234556555555555556655542 23355556
Q ss_pred CCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec---CCCHHHHHHHHHHHHHhCC-ccc
Q 027947 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKVFSKYVIINQR-KML 211 (216)
Q Consensus 141 GP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~a~~~~~~-~~~ 211 (216)
+....+ ||.+ ..+.+++.++ ++.+.+.|||.|.+-+ +-...+....++.+++.-. .|+
T Consensus 141 ~~~~~~-----e~~~----~~~~~~~~~~----~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l 202 (295)
T 1ydn_A 141 SCVVEC-----PYDG----PVTPQAVASV----TEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSL 202 (295)
T ss_dssp ECSSEE-----TTTE----ECCHHHHHHH----HHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGE
T ss_pred EEEecC-----CcCC----CCCHHHHHHH----HHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeE
Confidence 553221 2211 2466666655 6677788999997663 2367888888988887653 344
No 19
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=86.36 E-value=15 Score=31.50 Aligned_cols=107 Identities=18% Similarity=0.111 Sum_probs=63.8
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-| ..-|-+=. .-++.++-.++++.+++.+. +
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 91 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGES------ATLDVEEHIQVIRRVVDQVK------------------------G 91 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTG------GGCCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 44678888888889999944 33443211 22455666777776666531 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 92 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 92 RIPVIAG-TGA------------------NSTREAVA----LTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV 148 (314)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2234554 222 13344433 366667778888877652 46667777777777766
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 149 ~lPii 153 (314)
T 3qze_A 149 AIPQI 153 (314)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 77775
No 20
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.35 E-value=0.42 Score=40.48 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
-.++++++.++|+|+|++|.+|+..+++.+.+.+.
T Consensus 170 ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~ 204 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVS 204 (255)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCC
Confidence 34578999999999999999999999888877653
No 21
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.23 E-value=17 Score=31.17 Aligned_cols=47 Identities=11% Similarity=0.038 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHHHhcCCe-eeccccccCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANI-IITASYQATIQGFEAKGFSTEEAEALLRRSVEIA 105 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadi-I~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA 105 (216)
|.+.++++-+-++++|++- +..-|-+=. .-++.++-.++++.+++.+
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~~ 77 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAEA------FLLTREERAQLIATARKAV 77 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGTG------GGSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh------hhCCHHHHHHHHHHHHHHh
Confidence 3467888888888999984 434343211 1245556666666665543
No 22
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.12 E-value=16 Score=30.78 Aligned_cols=107 Identities=19% Similarity=0.156 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-| ..-|-+=. .-++.++-.++++.+++.+. +
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 69 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEA------STLSMEEHTQVIKEIIRVAN------------------------K 69 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccccc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 45778888888889999844 33333211 22455666666666665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec----CCCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 70 r~pviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 70 RIPIIAG-TGA------------------NSTREAIE----LTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV 126 (291)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2234555 332 13344433 35666677888887764 245667777777777767
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 127 ~lPii 131 (291)
T 3tak_A 127 ELPLI 131 (291)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 77775
No 23
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=85.12 E-value=11 Score=32.24 Aligned_cols=105 Identities=20% Similarity=0.175 Sum_probs=61.3
Q ss_pred HHHhcCCeeeccccccCHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCC
Q 027947 64 YLDAGANIIITASYQATIQ-GFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGS 142 (216)
Q Consensus 64 Yl~AGadiI~TnTy~a~~~-~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP 142 (216)
-+++|++.|.... .+|.. .....+.+.++..+.....++.|++. +. .|-+.+.-
T Consensus 90 a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~----------------------G~--~v~~~i~~ 144 (307)
T 1ydo_A 90 ALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA----------------------NL--TTRAYLST 144 (307)
T ss_dssp HHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT----------------------TC--EEEEEEEC
T ss_pred HHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------CC--EEEEEEEE
Confidence 4668999877553 33433 22344666665555555555555442 22 24344333
Q ss_pred -cccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-c--CCCHHHHHHHHHHHHHhC
Q 027947 143 -YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-T--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 143 -~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~E-T--~p~~~Ea~a~~~a~~~~~ 207 (216)
++. ||.+. .+.+ ++.+.++.+.+.|+|.|.+= | +-.+.++..+++++++.-
T Consensus 145 ~~~~------~~~~~----~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 145 VFGC------PYEKD----VPIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp TTCB------TTTBC----CCHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTS
T ss_pred EecC------CcCCC----CCHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhC
Confidence 221 23332 3555 45555778888999988665 3 347889999999998754
No 24
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=84.89 E-value=17 Score=30.72 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=60.0
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGES------PTLSKSEHEQVVEITIKTAN------------------------G 68 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888899999554 3332211 12455666667666665431 1
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+|. |.. +.++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 69 r~pviaGv-g~~------------------~t~~ai----~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (292)
T 2vc6_A 69 RVPVIAGA-GSN------------------STAEAI----AFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS 125 (292)
T ss_dssp SSCBEEEC-CCS------------------SHHHHH----HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEec-CCc------------------cHHHHH----HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 22345552 221 223332 2355566677777776542 35566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 126 ~lPii 130 (292)
T 2vc6_A 126 TIPII 130 (292)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 67765
No 25
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=84.86 E-value=17 Score=30.73 Aligned_cols=107 Identities=16% Similarity=0.112 Sum_probs=58.7
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-+++.|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGES------PTLTFEEHEKVIEFAVKRAA------------------------G 68 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456778877778899998443 3332211 12455566667666665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|.. +.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 69 rvpviaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 69 RIKVIAG-TGGN------------------ATHEAVH----LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp SSEEEEE-CCCS------------------CHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCCC------------------CHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2234555 2221 2333322 355556677777766542 35566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 126 ~lPii 130 (294)
T 2ehh_A 126 DIPII 130 (294)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 66664
No 26
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=84.68 E-value=17 Score=30.73 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=63.0
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.+++.-+-++++|++-|. .-|=+=. .-++.++-.++++.+++.+. +
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 75 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGES------ATLSVEEHTAVIEAVVKHVA------------------------K 75 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 446788888888899998443 3333211 22455666677766665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec----CCCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 76 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 76 RVPVIAG-TGA------------------NNTVEAIA----LSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2234555 232 13344433 35666778888887764 245666777777777766
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 133 ~lPii 137 (297)
T 3flu_A 133 SIPMI 137 (297)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 77775
No 27
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.56 E-value=3.6 Score=34.85 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=69.6
Q ss_pred ccccccCCCh--HHHHHHHHHHHHhcCCeeeccccccCHH-----------HHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 027947 45 WSAKCLVSSP--HLVRKVHLDYLDAGANIIITASYQATIQ-----------GFEAKGFSTEEAEALLRRSVEIACEAREI 111 (216)
Q Consensus 45 ws~~~ll~~p--e~V~~iH~~Yl~AGadiI~TnTy~a~~~-----------~l~~~g~~~~~~~~l~~~av~lA~~A~~~ 111 (216)
+..+.+.-+| +.-.++-+...++|||+|.-.-.-..|- +.-..|+.. .+..++.++.+..
T Consensus 20 li~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~-------~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 20 FVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTS-------SDCFDIITKVRAQ 92 (267)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCH-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHhc
Confidence 3344555666 7788888889999999998664332221 111223321 1235566666543
Q ss_pred HHhhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Q 027947 112 YYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP 191 (216)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p 191 (216)
+ ...|+.+-+ -++..+. | . ...-++.+.++|||.+++=.+|
T Consensus 93 ~-----------------~~~Pivlm~---Y~npv~~--------~----g-------~e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 93 H-----------------PDMPIGLLL---YANLVFA--------N----G-------IDEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp C-----------------TTCCEEEEE---CHHHHHH--------H----C-------HHHHHHHHHHHTCCEEEETTSC
T ss_pred C-----------------CCCCEEEEe---cCcHHHH--------h----h-------HHHHHHHHHHcCCCEEEeCCCC
Confidence 1 123544332 2221110 1 1 1233667788899999998888
Q ss_pred CHHHHHHHHHHHHHhCCccc
Q 027947 192 NKLEAKVFSKYVIINQRKML 211 (216)
Q Consensus 192 ~~~Ea~a~~~a~~~~~~~~~ 211 (216)
. +|....++++++.+..++
T Consensus 134 ~-ee~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 134 V-EESAPFSKAAKAHGIAPI 152 (267)
T ss_dssp G-GGCHHHHHHHHHTTCEEE
T ss_pred H-hhHHHHHHHHHHcCCeEE
Confidence 4 688888889988875544
No 28
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.19 E-value=20 Score=31.12 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEF------SQLGAEERKAIARFAIDH 96 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh------hhCCHHHHHHHHHHHHHH
Confidence 456788888888999998443 3332211 124556666676666654
No 29
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=84.14 E-value=8.5 Score=32.43 Aligned_cols=49 Identities=10% Similarity=0.065 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHH-HHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKV-FSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a-~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=+- -+-+ +++.+++..+.|++.
T Consensus 47 ks~~~i~~~~~~~~~~L~~~g~~~IVIACN----Ta~~~al~~lr~~~~iPvig 96 (269)
T 3ist_A 47 RDKEEVAKFTWEMTNFLVDRGIKMLVIACN----TATAAALYDIREKLDIPVIG 96 (269)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCH----HHHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCC----CccHHHHHHHHHhcCCCEEe
Confidence 589999999999999999999999997432 2233 477888877788763
No 30
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.13 E-value=20 Score=30.99 Aligned_cols=107 Identities=15% Similarity=0.049 Sum_probs=59.6
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~vi~~~ve~~~------------------------g 102 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIY------MYLTREERRRAIEAAATILR------------------------G 102 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999544 3333211 12455666677776665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|.. +.++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 103 rvpViaG-vg~~------------------st~eai----~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 159 (332)
T 2r8w_A 103 RRTLMAG-IGAL------------------RTDEAV----ALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT 159 (332)
T ss_dssp SSEEEEE-ECCS------------------SHHHHH----HHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCCC------------------CHHHHH----HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2334555 3321 223333 2355555667777766442 35556666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 160 ~lPii 164 (332)
T 2r8w_A 160 ALPLA 164 (332)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 66664
No 31
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=84.03 E-value=19 Score=30.79 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=60.6
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 92 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEG------AYLSDPEWDEVVDFTLKTVA------------------------H 92 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 457888888888899999443 3333211 22455666667666665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 93 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 93 RVPTIVS-VSD------------------LTTAKTVR----RAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2234555 222 13333332 355666677777776432 35566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 150 ~lPii 154 (315)
T 3na8_A 150 GVPVM 154 (315)
T ss_dssp SSCEE
T ss_pred CCcEE
Confidence 66765
No 32
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=83.90 E-value=15 Score=33.02 Aligned_cols=97 Identities=24% Similarity=0.330 Sum_probs=64.1
Q ss_pred hHHHHHHHHH----HHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 027947 54 PHLVRKVHLD----YLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (216)
Q Consensus 54 pe~V~~iH~~----Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (216)
.+.+++.|+. ++++|+|+|.--|+..- .+++. +++.+++
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~ETi~~~-----------~Eaka----a~~a~~~---------------------- 176 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIAEYFEHV-----------EEAVW----AVETLIA---------------------- 176 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCSCH-----------HHHHH----HHHHHGG----------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEcccCCH-----------HHHHH----HHHHHHH----------------------
Confidence 4667777765 45789999998888532 22222 2222221
Q ss_pred CCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHh
Q 027947 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIIN 206 (216)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~ 206 (216)
.+.|++|..++..-|. + +| .+.+++ +..+.+.++|.|.+-.-....++..+++.+++.
T Consensus 177 ~~lPv~iS~T~~~~G~-l-~G----------~~~~~~-------~~~l~~~~~~avGvNC~~gP~~~~~~l~~l~~~ 234 (406)
T 1lt8_A 177 SGKPVAATMAIGPEGD-L-HG----------VPPGEA-------AVRLVKAGASIIGVNCHFDPTISLKTVKLMKEG 234 (406)
T ss_dssp GTSCEEEEECCBTTBC-T-TC----------CCHHHH-------HHHHHTTTCSEEEEESSSCHHHHHHHHHHHHHH
T ss_pred hCCcEEEEEEECCCCC-c-CC----------CcHHHH-------HHHhhcCCCCEEEecCCCCHHHHHHHHHHHHHh
Confidence 1368999999987665 3 22 244443 344555789999999976788899999888865
No 33
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=83.79 E-value=18 Score=30.44 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 69 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEA------TTMTETERKETIKFVIDKVN------------------------K 69 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 567788888888999998443 3333211 12455666677766665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 70 r~pvi~G-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (291)
T 3a5f_A 70 RIPVIAG-TGS------------------NNTAASIA----MSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV 126 (291)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC
T ss_pred CCcEEEe-CCc------------------ccHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2234555 232 13334332 356666778888876542 35555555555555555
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 127 ~lPii 131 (291)
T 3a5f_A 127 STPII 131 (291)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 67764
No 34
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=83.69 E-value=19 Score=30.52 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=61.0
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~v~~~~~~~~~------------------------g 80 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGES------PTLTSEEKVALYRHVVSVVD------------------------K 80 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999443 3332211 12455666677766665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 81 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 81 RVPVIAG-TGS------------------NNTHASID----LTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp SSCEEEE-CCC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC
T ss_pred CceEEeC-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2234555 232 13333332 355566678887776542 35566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 138 ~lPii 142 (301)
T 1xky_A 138 PLPVM 142 (301)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 67765
No 35
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=83.59 E-value=19 Score=30.40 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEG------CSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHH
Confidence 456788888888899998544 3332211 124555666666665544
No 36
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=83.51 E-value=19 Score=30.33 Aligned_cols=47 Identities=11% Similarity=0.214 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIA 105 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA 105 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~ 67 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGES------ATLNHDEHADVVMMTLDLA 67 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch------hhCCHHHHHHHHHHHHHHh
Confidence 456788888888899998544 3332211 1245566667777666543
No 37
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=83.50 E-value=20 Score=30.43 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~------~~Ls~~Er~~v~~~~~~~ 65 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGES------PTLTEEEHKRVVALVAEQ 65 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch------hhCCHHHHHHHHHHHHHH
Confidence 456788888888899998544 3332211 124556666666666654
No 38
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=83.39 E-value=20 Score=30.33 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Lt~~Er~~v~~~~~~~ 67 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAES------PTLTTDEKELILKTVIDL 67 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccc------ccCCHHHHHHHHHHHHHH
Confidence 456788887888899998443 3332211 124556666676666654
No 39
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=82.93 E-value=22 Score=30.51 Aligned_cols=107 Identities=18% Similarity=0.126 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-+++.|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 90 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGES------PTLTHEEHKRIIELCVEQVA------------------------K 90 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc------cccCHHHHHHHHHHHHHHhC------------------------C
Confidence 346888888888899998544 3333211 22455666667666665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec----CCCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 91 rvpViaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 91 RVPVVAG-AGS------------------NSTSEAVE----LAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI 147 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC
Confidence 2234454 222 12333332 35556667777776654 235556666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 148 ~lPii 152 (315)
T 3si9_A 148 SIPII 152 (315)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 66665
No 40
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=82.14 E-value=23 Score=30.18 Aligned_cols=107 Identities=13% Similarity=-0.008 Sum_probs=61.5
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.+++.-+.++++|++-| ..-|=+=. .-++.++-.++++.+++.+ .+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~~------------------------~g 82 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEF------PFLTSSERLEVVSRVRQAM------------------------PK 82 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTG------GGSCHHHHHHHHHHHHHTS------------------------CT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch------hhCCHHHHHHHHHHHHHHc------------------------CC
Confidence 44678888888889999843 33332211 1244455566665554431 22
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC------CCHHHHHHHHHHHHH
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI------PNKLEAKVFSKYVII 205 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~------p~~~Ea~a~~~a~~~ 205 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= ++-+++..-.+.+.+
T Consensus 83 r~pviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 83 NRLLLAG-SGC------------------ESTQATVE----MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVAD 139 (307)
T ss_dssp TSEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHH
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHh
Confidence 3345565 222 13344433 355666788888887542 355677777777777
Q ss_pred hCCcccc
Q 027947 206 NQRKMLL 212 (216)
Q Consensus 206 ~~~~~~~ 212 (216)
..+.|++
T Consensus 140 a~~lPii 146 (307)
T 3s5o_A 140 LSPIPVV 146 (307)
T ss_dssp HCSSCEE
T ss_pred hcCCCEE
Confidence 7777775
No 41
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=82.01 E-value=16 Score=29.79 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=59.8
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (216)
+.+-|+.+...-+.|.++|||+|+-..|... +.++.+++.+++ +
T Consensus 73 l~DipnTv~~~~~~~~~~gad~vtvh~~~G~---------------~~l~~~~~~~~~----~----------------- 116 (228)
T 3m47_A 73 VADIPETNEKICRATFKAGADAIIVHGFPGA---------------DSVRACLNVAEE----M----------------- 116 (228)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESTTCH---------------HHHHHHHHHHHH----H-----------------
T ss_pred ecccHhHHHHHHHHHHhCCCCEEEEeccCCH---------------HHHHHHHHHHHh----c-----------------
Confidence 4578999999999999999999887766421 123334443332 1
Q ss_pred CCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHH
Q 027947 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYV 203 (216)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~ 203 (216)
++.++|..++.+-+.. .... +.....++...+.|+|.++.-. ....|++.+.+.+
T Consensus 117 -g~~v~vLt~~s~~~~~--------------~~~~---~~~~~~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~ 171 (228)
T 3m47_A 117 -GREVFLLTEMSHPGAE--------------MFIQ---GAADEIARMGVDLGVKNYVGPS-TRPERLSRLREII 171 (228)
T ss_dssp -TCEEEEECCCCSGGGG--------------TTHH---HHHHHHHHHHHHTTCCEEECCS-SCHHHHHHHHHHH
T ss_pred -CCCeEEEEeCCCccHH--------------HHHH---HHHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhc
Confidence 2346665666554321 0111 3344555666778999988654 3466666555443
No 42
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=81.99 E-value=23 Score=30.11 Aligned_cols=107 Identities=20% Similarity=0.166 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+. +
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 84 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGES------PTTTAAEKLELLKAVREEVG------------------------D 84 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTT------TTSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999998443 3332211 22455666677766665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. .+.++..+. ++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 85 rvpviaG-vg~------------------~st~~ai~l----a~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 141 (304)
T 3cpr_A 85 RAKLIAG-VGT------------------NNTRTSVEL----AEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT 141 (304)
T ss_dssp TSEEEEE-CCC------------------SCHHHHHHH----HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEec-CCC------------------CCHHHHHHH----HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2334555 232 133333332 55566678887776542 35566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 142 ~lPii 146 (304)
T 3cpr_A 142 EVPIC 146 (304)
T ss_dssp CSCEE
T ss_pred CCCEE
Confidence 67765
No 43
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=81.85 E-value=22 Score=29.89 Aligned_cols=46 Identities=13% Similarity=0.187 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~ 65 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGES------PTLSHEEHKKVIEKVVDV 65 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHH
Confidence 456788888888899998443 3332211 124555666666666654
No 44
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=81.48 E-value=1.4 Score=38.26 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
--+|+++..++|+|+|.+|-+.+..|++.+++.+.
T Consensus 172 Ai~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 172 SVARLRAARDAGADVGFLEGITSREMARQVIQDLA 206 (302)
T ss_dssp HHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc
Confidence 45689999999999999999999999998888774
No 45
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.48 E-value=24 Score=30.06 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=28.6
Q ss_pred ChHHHHHHHHHHHHhcCC-eeeccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGAN-IIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGad-iI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++ |+..-|=+=. .-++.++-.++++.+++.
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQ------FAITDDERDVLTRTILEH 73 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc------ccCCHHHHHHHHHHHHHH
Confidence 456788888888899998 4443443211 124556666777766654
No 46
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=81.37 E-value=23 Score=29.81 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHHH-hcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLD-AGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~-AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-+++ +|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~ 69 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGEN------FMLSTEEKKEIFRIAKDE 69 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccch------hhCCHHHHHHHHHHHHHH
Confidence 45678888888889 9998544 3332211 224556666676666654
No 47
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=81.27 E-value=24 Score=29.96 Aligned_cols=46 Identities=22% Similarity=0.314 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~vi~~~~~~ 77 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGES------PTVNEDEREKLVSRTLEI 77 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch------hhCCHHHHHHHHHHHHHH
Confidence 456788888888899998443 3443211 124556666676666654
No 48
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=80.83 E-value=25 Score=29.87 Aligned_cols=107 Identities=17% Similarity=0.172 Sum_probs=64.1
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-| ..-|-+=. .-++.++-.++++.+++.+. +
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~------~~Lt~~Er~~v~~~~~~~~~------------------------g 83 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGES------PTTTDGEKIELLRAVLEAVG------------------------D 83 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 45788888888889999844 34443311 22455666677666665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec----CCCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|.. +.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 84 rvpviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 84 RARVIAG-AGTY------------------DTAHSIR----LAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT 140 (304)
T ss_dssp TSEEEEE-CCCS------------------CHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC
T ss_pred CCeEEEe-CCCC------------------CHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2344555 3321 3344433 35666667888888764 235667777777777777
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 141 ~lPii 145 (304)
T 3l21_A 141 ELPML 145 (304)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 77775
No 49
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=80.35 E-value=26 Score=29.69 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=61.7
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+ .+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~------------------------~g 75 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGES------ATLTHEEHRTCIEIAVETC------------------------KG 75 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTG------GGSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh------------------------CC
Confidence 446788888888899998544 3333211 1245566666666666543 12
Q ss_pred -CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec----CCCHHHHHHHHHHHHHh
Q 027947 132 -RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKVFSKYVIIN 206 (216)
Q Consensus 132 -~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~a~~~~ 206 (216)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+.
T Consensus 76 ~rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 76 TKVKVLAG-AGS------------------NATHEAVG----LAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp SSCEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEe-CCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 2334555 332 13334433 35566667888877654 23556666666666666
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
.+.|++
T Consensus 133 ~~lPii 138 (301)
T 3m5v_A 133 VDIPVL 138 (301)
T ss_dssp CSSCEE
T ss_pred CCCCEE
Confidence 677765
No 50
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=79.34 E-value=25 Score=30.32 Aligned_cols=40 Identities=15% Similarity=0.064 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~ 207 (216)
+++.+.++.+.+.|+|.|.+- |+ -.+.++..+++++++.-
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhc
Confidence 566777899999999999664 43 37889999999998765
No 51
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=79.33 E-value=2.2 Score=36.50 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHH
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYV 203 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~ 203 (216)
+.+++ +--.++++++.++|+|.|++|-+|+. +++.+.+.+
T Consensus 168 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l 207 (275)
T 3vav_A 168 TEAGA-AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL 207 (275)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC
T ss_pred CHHHH-HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC
Confidence 44444 55567899999999999999999986 766665544
No 52
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=79.01 E-value=2.3 Score=38.65 Aligned_cols=34 Identities=38% Similarity=0.305 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCCEEEEec-CCCHHHHHHHHHHHHH
Q 027947 171 RRRVLILANSGADLIAFET-IPNKLEAKVFSKYVII 205 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~a~~~ 205 (216)
-.|++++.+ |+|+|++|| .|++.|++.+++.++.
T Consensus 270 I~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 270 IARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 446788888 899999998 8999999999999984
No 53
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=78.81 E-value=29 Score=29.41 Aligned_cols=46 Identities=17% Similarity=0.068 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-+++.|++-|. .-|-+=. .-++.++-.++++.+++.
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEA------FVQSLSEREQVLEIVAEE 76 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccCh------hhCCHHHHHHHHHHHHHH
Confidence 456788888888899998544 3332211 124556666666666654
No 54
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=76.99 E-value=33 Score=29.03 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIA 105 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA 105 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~ 70 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEF------AYLGTAQREAVVRATIEAA 70 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTG------GGCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc------cccCHHHHHHHHHHHHHHh
Confidence 456788888888899998544 3333211 2245566666766666553
No 55
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=76.83 E-value=34 Score=29.15 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIA 105 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA 105 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~v~~~~v~~~ 78 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEF------YALSLEEAKEEVRRTVEYV 78 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTG------GGSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc------ccCCHHHHHHHHHHHHHHh
Confidence 447788888888899998554 3332211 1245556666666665543
No 56
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=76.77 E-value=34 Score=29.14 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=61.2
Q ss_pred ChHHHHHHHHHHHHhcCCeeecc-ccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|..+ |-+=. .-++.++-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~vi~~~~~~~~------------------------g 80 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEF------YALTIEEAKQVATRVTELVN------------------------G 80 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 45678888888899999955533 43211 22455666677766665431 2
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhC
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~ 207 (216)
+-..|+| +|. . .++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 81 rvpViaG-vg~-s------------------t~~ai----~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (314)
T 3d0c_A 81 RATVVAG-IGY-S------------------VDTAI----ELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL 136 (314)
T ss_dssp SSEEEEE-ECS-S------------------HHHHH----HHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS
T ss_pred CCeEEec-CCc-C------------------HHHHH----HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2234555 333 2 12222 3455666678888776542 45566666666666666
Q ss_pred Ccccc
Q 027947 208 RKMLL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.|++
T Consensus 137 ~lPii 141 (314)
T 3d0c_A 137 DAPSI 141 (314)
T ss_dssp SSCEE
T ss_pred CCCEE
Confidence 67765
No 57
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=76.76 E-value=18 Score=30.01 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=27.2
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCc
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~ 209 (216)
-++.+.++|+|.+++=.+| ..|....++++++++..
T Consensus 114 f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 114 FCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS 149 (262)
T ss_dssp HHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc
Confidence 3566778899988876666 47888888888887643
No 58
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=76.21 E-value=34 Score=28.78 Aligned_cols=105 Identities=20% Similarity=0.127 Sum_probs=60.0
Q ss_pred HHHhcCCeeeccccccCHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCC
Q 027947 64 YLDAGANIIITASYQATIQ-GFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGS 142 (216)
Q Consensus 64 Yl~AGadiI~TnTy~a~~~-~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP 142 (216)
-+++|++.|.... .++.. .....+.+.++.-+....+++.|++. +.+ |-+.+.-
T Consensus 89 a~~ag~~~v~i~~-~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~----------------------G~~--v~~~l~~ 143 (298)
T 2cw6_A 89 AVAAGAKEVVIFG-AASELFTKKNINCSIEESFQRFDAILKAAQSA----------------------NIS--VRGYVSC 143 (298)
T ss_dssp HHHTTCSEEEEEE-ESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT----------------------TCE--EEEEEET
T ss_pred HHHCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------CCe--EEEEEEE
Confidence 4678999877633 33332 22344666555555555555555442 223 3333322
Q ss_pred -cccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhC
Q 027947 143 -YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 143 -~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~ 207 (216)
++. ||.+. .+.+. ..+.++.+.+.|+|.|.+= |+ -++.+...+++++++.-
T Consensus 144 ~~~~------~~~~~----~~~~~----~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 144 ALGC------PYEGK----ISPAK----VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTCB------TTTBS----CCHHH----HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHS
T ss_pred EeeC------CcCCC----CCHHH----HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 221 22222 35554 4555788889999998543 43 36889999999998764
No 59
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=74.25 E-value=38 Score=28.84 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEecC----CCHHHHHHHHHHHHHhCCcc-ccc
Q 027947 168 EFHRRRVLILANSGADLIAFETI----PNKLEAKVFSKYVIINQRKM-LLK 213 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~a~~~~~~~~-~~~ 213 (216)
+.....++.+.+.|+|++=++.. .+..+++.+++.....+..| |+.
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~ 227 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL 227 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE
Confidence 44555688899999999988874 57888888888877767788 653
No 60
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=72.89 E-value=8 Score=32.79 Aligned_cols=48 Identities=8% Similarity=0.018 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHH-HHHHHHHHhCCcccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAK-VFSKYVIINQRKMLL 212 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~-a~~~a~~~~~~~~~~ 212 (216)
-+.+++.++-.+.++.|.+.|+|+|++=+- -+- .+++.+++..+.|++
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACN----Ta~~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACN----TASAYALDALRAKAHFPVY 114 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCH----HHHHHSHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCC----ChhHHHHHHHHHhcCCCEE
Confidence 589999999999999999999999997432 222 236777777677776
No 61
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=71.61 E-value=12 Score=31.48 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhC-Cccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQ-RKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~-~~~~~~ 213 (216)
-+.+++.++-.+.++.|.+.|+|+|++=+-. --..+++.+++.. +.|++.
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIACNT---a~~~al~~lr~~~~~iPvig 99 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIACNT---ISAIAKDIVQEIAKAIPVID 99 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHH---HHHHHHHHHHHHHTTSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHHHhcCCCCEEe
Confidence 5899999999999999999999999975322 1124567777776 788763
No 62
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=71.18 E-value=37 Score=28.19 Aligned_cols=50 Identities=4% Similarity=-0.031 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILAN-SGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~-~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+ .|+|+|++=.... -..+++.+++..+.|++.
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTa---s~~~l~~lr~~~~iPVig 95 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTA---TAIALDDIQRSVGIPVVG 95 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHH---HHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchh---hHHHHHHHHHHCCCCEEc
Confidence 5789999999999999999 9999999743221 123577888777788763
No 63
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=70.51 E-value=46 Score=27.81 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=59.3
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.+++.+ .+
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~------------------------~g 66 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLG------PALSLQEKMELTDAATSAA------------------------RR 66 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG------GGSCHHHHHHHHHHHHHHC------------------------SS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh------------------------CC
Confidence 456778887888899998443 3332211 1244455556666555431 12
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC-----CCHHHHHHHHHHHHHh
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKVFSKYVIIN 206 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~a~~~~ 206 (216)
.|+|. |. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+.
T Consensus 67 ---vi~Gv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 67 ---VIVQV-AS------------------LNADEAIA----LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp ---EEEEC-CC------------------SSHHHHHH----HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred ---EEEee-CC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 55552 22 13334333 356666778888876543 4556666666666666
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
.+.|++
T Consensus 121 ~~lPii 126 (286)
T 2r91_A 121 VSIPVF 126 (286)
T ss_dssp CSSCEE
T ss_pred cCCCEE
Confidence 677765
No 64
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=69.73 E-value=8 Score=33.22 Aligned_cols=45 Identities=9% Similarity=0.072 Sum_probs=36.1
Q ss_pred HHHHHHHhCCCCEEEEecCCC---HHHHHHHHHHHHHhCCcccccccC
Q 027947 172 RRVLILANSGADLIAFETIPN---KLEAKVFSKYVIINQRKMLLKKFV 216 (216)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~---~~Ea~a~~~a~~~~~~~~~~~~~~ 216 (216)
+.++.+.++|.|.|++-|..- ...+..++.++|+..++|++.||.
T Consensus 57 ~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 57 EKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred HHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEEECC
Confidence 347777889999999995422 356889999999988899998874
No 65
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=69.11 E-value=41 Score=27.84 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=... --..+++.+++..+.|++.
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNT---as~~~l~~lr~~~~iPvig 103 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFACNT---ATAVAWEEVKAALDIPVLG 103 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHH---HHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCch---HhHHHHHHHHHhCCCCEEe
Confidence 4789999999999999999999999974322 1123467777777788764
No 66
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.91 E-value=51 Score=27.68 Aligned_cols=104 Identities=11% Similarity=0.072 Sum_probs=59.5
Q ss_pred ChHHHHHHHHHHHHhcCCe-eeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANI-IITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadi-I~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++- +..-|-+=. .-++.++-.++++.+++.+ .+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~eEr~~v~~~~~~~~------------------------~g 67 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTGLG------PSLSPEEKLENLKAVYDVT------------------------NK 67 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHTTC------------------------SC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHc------------------------CC
Confidence 4567888888888999994 434442211 1244455555555554321 12
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC-----CCHHHHHHHHHHHHHh
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKVFSKYVIIN 206 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~a~~~~ 206 (216)
.|+|. |. .+.++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+.
T Consensus 68 ---viaGv-g~------------------~~t~~ai----~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 68 ---IIFQV-GG------------------LNLDDAI----RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp ---EEEEC-CC------------------SCHHHHH----HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH
T ss_pred ---EEEec-CC------------------CCHHHHH----HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 55552 22 1333433 2366667788888877543 4556666666666666
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
.+.|++
T Consensus 122 ~~lPii 127 (293)
T 1w3i_A 122 SPHPVY 127 (293)
T ss_dssp CSSCEE
T ss_pred CCCCEE
Confidence 677765
No 67
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=67.69 E-value=37 Score=27.61 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=22.4
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
+.+|+.+.++=+.|.++||..|..+
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~~ 56 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAVRIE 56 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcchHHHHHHHHHHCCCeEEEEC
Confidence 5778999999999999999988874
No 68
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=67.00 E-value=6.1 Score=33.55 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHH
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKY 202 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a 202 (216)
+.+++ +--.++++++.++|+|.|++|-+|. .+++.+.+.
T Consensus 156 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~ 194 (264)
T 1m3u_A 156 GDEAG-DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEA 194 (264)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHh
Confidence 43433 5556689999999999999999994 455544443
No 69
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=66.56 E-value=57 Score=27.32 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-+++.|++-|. .-|-+=. .-++.++-.++++.+++.+ .+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~v~~~~~~~~------------------------~g 67 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGLG------PALSKDEKRQNLNALYDVT------------------------HK 67 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG------GGSCHHHHHHHHHHHTTTC------------------------SC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh------------------------CC
Confidence 456788888888899998443 3332211 1244455555555544321 12
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC-----CCHHHHHHHHHHHHHh
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKVFSKYVIIN 206 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~a~~~~ 206 (216)
.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+.
T Consensus 68 ---ViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (288)
T 2nuw_A 68 ---LIFQ-VGS------------------LNLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp ---EEEE-CCC------------------SCHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred ---eEEe-eCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 5555 222 13344433 366677788998877542 4666777777777777
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
.+.|++
T Consensus 122 ~~lPii 127 (288)
T 2nuw_A 122 SSHSLY 127 (288)
T ss_dssp CCSCEE
T ss_pred cCCCEE
Confidence 777875
No 70
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=66.43 E-value=21 Score=29.59 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=+.. --..+++.+++..+.|++.
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNT---as~~~l~~lr~~~~iPvig 94 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNT---ATAVVLEEMQKQLPIPVVG 94 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHH---HHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCch---hhHHHHHHHHHhCCCCEEe
Confidence 5789999999999999999999999974322 1123577888877788764
No 71
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=66.29 E-value=8.9 Score=34.04 Aligned_cols=43 Identities=9% Similarity=0.220 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccccc
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLKK 214 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~~ 214 (216)
-..|++.|.++|+|++=+ |+|+..+ ..++..+++..+.||.--
T Consensus 48 tv~Qi~~l~~aG~diVRv-avp~~~~-a~al~~I~~~~~vPlvaD 90 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRV-AVPHKED-VEALEEIVKKSPMPVIAD 90 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE-ECCSHHH-HHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEe-CCCChHH-HHHHHHHHhcCCCCEEEe
Confidence 456899999999999986 8899655 566777777788898754
No 72
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=64.24 E-value=74 Score=27.85 Aligned_cols=40 Identities=18% Similarity=0.240 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~ 207 (216)
+|..+.++.+.++|+|.|.+= |+ -.+.++..+++++++.-
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 456667888899999998765 43 46889999999998754
No 73
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=64.15 E-value=13 Score=33.66 Aligned_cols=72 Identities=15% Similarity=0.283 Sum_probs=48.8
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCCCCCccccccccCCChHHHHHHHHHHHHhcCC------ee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGAN------II 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGad------iI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++....+.. -+.-+..+++...+-+.|+. ++
T Consensus 211 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~Sl~E----~d~~~~A~~ll~ka~~~g~~i~lPvD~v 285 (415)
T 16pk_A 211 VGGAKVSDKIQLLDNMLQR-IDYLLIGGAMAYTFLKAQGYSIGKSKCE----ESKLEFARSLLKKAEDRKVQVILPIDHV 285 (415)
T ss_dssp ECSSCSGGGHHHHHHHGGG-CSEEEECTTHHHHHHHHHTCCCTTCCCC----GGGHHHHHHHHHHHHHTTCEEECCSSEE
T ss_pred EcCcchhhHHHHHHHHHHh-cCeeEeCcHHHHHHHHHcCCCcCccccC----hhhHHHHHHHHHHHHhcCCEEECCceee
Confidence 57999998 668888886 57889999999777665 8887653211 12235666777666556764 55
Q ss_pred eccccc
Q 027947 73 ITASYQ 78 (216)
Q Consensus 73 ~TnTy~ 78 (216)
.+..|.
T Consensus 286 va~~f~ 291 (415)
T 16pk_A 286 CHTEFK 291 (415)
T ss_dssp EESSSS
T ss_pred hhhccc
Confidence 555553
No 74
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=64.14 E-value=52 Score=26.57 Aligned_cols=40 Identities=25% Similarity=0.250 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCC--------CHHHHHHHHHHH
Q 027947 163 LETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKVFSKYV 203 (216)
Q Consensus 163 ~ee~~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~a~ 203 (216)
.+.+.+..++..+.+.+.||. |.+|+++ +..++..+++.+
T Consensus 127 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 127 WERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHc
Confidence 344444555555555667986 6679884 455555554443
No 75
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=63.77 E-value=68 Score=27.22 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
|.+.++++-+-++++|++-| ..-|-+=. .-++.++-.++++.+++.
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Lt~~Er~~v~~~~v~~ 73 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEA------PKLDAAEAEAVATRFIKR 73 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcCh------hhCCHHHHHHHHHHHHHH
Confidence 44688888888889999844 33333211 124555666666666554
No 76
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=63.57 E-value=7.2 Score=33.31 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHH
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKY 202 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a 202 (216)
+--.++++++.++|+|.|++|-+|. .+++.+.+.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~ 194 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTET 194 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHh
Confidence 4456689999999999999999994 455544443
No 77
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=63.22 E-value=18 Score=29.76 Aligned_cols=50 Identities=8% Similarity=0.052 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=.... -..+++.+++..+.|++.
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa---~~~~~~~lr~~~~iPvig 91 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTA---SALALEEMQKYSKIPIVG 91 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHH---HHHTHHHHHHHCSSCEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh---hHHHHHHHHHhCCCCEEe
Confidence 47899999999999999999999999654221 112577788777888864
No 78
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=61.92 E-value=48 Score=27.33 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=26.7
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCc
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~ 209 (216)
-++.+.++|+|.+++=-++. .|....++.+++.+.+
T Consensus 114 ~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~ 149 (268)
T 1qop_A 114 FYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIA 149 (268)
T ss_dssp HHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCc
Confidence 36667788999888766663 5778888888887643
No 79
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=61.66 E-value=12 Score=33.45 Aligned_cols=65 Identities=12% Similarity=0.226 Sum_probs=44.7
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCCCCCccccccccCCChHHHHHHHHHHHHhcCCe
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANI 71 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadi 71 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++....+.. -+.-+..+++...+-+.|+.|
T Consensus 190 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~Sl~E----~d~~~~a~~ll~~a~~~g~~i 257 (390)
T 1v6s_A 190 LGGAKVSDKIGVIESLLPR-IDRLLIGGAMAFTFLKALGGEVGRSLVE----EDRLDLAKDLLGRAEALGVRV 257 (390)
T ss_dssp ECCSCGGGTHHHHHHHGGG-CSEEEECSTTHHHHHHHTTCBCTTCCCC----GGGHHHHHHHHHHHHHHTCEE
T ss_pred EcCCchhhHHHHHHHHHHH-hccceeCcHHHHHHHHHcCCCCCccccc----hhhHHHHHHHHHHHHHcCCEE
Confidence 57999998 668888886 57889999998766664 8887543211 122356667776666668653
No 80
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=61.65 E-value=13 Score=26.72 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCC
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQR 208 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~ 208 (216)
+.+++..---..++.|=+.|+|.|++|.+|.-....++..-+++...
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kAA~ 99 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKASG 99 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---CC
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHhcC
Confidence 45555554445677887789999999999998888888888887654
No 81
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=61.48 E-value=35 Score=28.98 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.+++... +..|.++|++.+-+|--. |....++++.+.+ .||.
T Consensus 93 s~~~a~~n----a~rl~kaGa~aVklEdg~---e~~~~I~al~~ag-IpV~ 135 (275)
T 1o66_A 93 SKEQAFAA----AAELMAAGAHMVKLEGGV---WMAETTEFLQMRG-IPVC 135 (275)
T ss_dssp CHHHHHHH----HHHHHHTTCSEEEEECSG---GGHHHHHHHHHTT-CCEE
T ss_pred CHHHHHHH----HHHHHHcCCcEEEECCcH---HHHHHHHHHHHcC-CCeE
Confidence 55555543 444666999999999863 5555666666654 4553
No 82
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=61.45 E-value=5.4 Score=34.21 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHH
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKY 202 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a 202 (216)
+--.++++++.++|+|.|++|-+|. .+++.+.+.
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~ 212 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGK 212 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHh
Confidence 5566789999999999999999994 455544443
No 83
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=61.11 E-value=29 Score=29.17 Aligned_cols=50 Identities=8% Similarity=0.017 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=+... -..+++.+++..+.|++.
T Consensus 66 ~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTa---s~~~l~~lr~~~~iPVig 115 (290)
T 2vvt_A 66 RPAEQVVQFTWEMADFLLKKRIKMLVIACNTA---TAVALEEIKAALPIPVVG 115 (290)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH---HHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCcch---hHHHHHHHHHhCCCCEEc
Confidence 57899999999999999999999999754332 123577888877788864
No 84
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=60.78 E-value=77 Score=26.88 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHHHhcCC-eeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGAN-IIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGad-iI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (216)
|.+.++++-+-++++|++ ++..-|-+=. .-++.++-.++++.+++.+ .+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~~------------------------~g 75 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAES------PTLTHDEELELFAAVQKVV------------------------NG 75 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTG------GGSCHHHHHHHHHHHHHHS------------------------CS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh------------------------CC
Confidence 346788887888899998 4444443311 1245566666666655542 12
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC-CEEEEec----CCCHHHHHHHHHHHHHh
Q 027947 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGA-DLIAFET----IPNKLEAKVFSKYVIIN 206 (216)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gv-D~l~~ET----~p~~~Ea~a~~~a~~~~ 206 (216)
+-..|+| +|.. +.++..+ +++...+.|+ |.+++=+ -|+-+++..-.+.+.+.
T Consensus 76 rvpViaG-vg~~------------------~t~~ai~----la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 76 RVPLIAG-VGTN------------------DTRDSIE----FVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA 132 (311)
T ss_dssp SSCEEEE-CCCS------------------SHHHHHH----HHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCCc------------------CHHHHHH----HHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 2334555 3321 3333332 3555666665 8777654 23556666666666666
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
.+.|++
T Consensus 133 ~~lPii 138 (311)
T 3h5d_A 133 SDLPII 138 (311)
T ss_dssp CSSCEE
T ss_pred CCCCEE
Confidence 667765
No 85
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=58.94 E-value=29 Score=29.11 Aligned_cols=50 Identities=10% Similarity=0.069 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=.... -..+++.+++..+.|++.
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTa---s~~~l~~lr~~~~iPVig 113 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTA---TAVALEYLQKTLSISVIG 113 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHH---HHHHHHHHHHHCSSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCch---hHHHHHHHHHhCCCCEEe
Confidence 57899999999999999999999999743221 123577777777788763
No 86
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=58.60 E-value=90 Score=26.97 Aligned_cols=42 Identities=10% Similarity=0.091 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHHhcCCeee-ccccccCHHHHHhcCCCHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRR 100 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~ 100 (216)
|.+.++++-+-++++|++-|. .-|-+=. .-++.++-.++++.
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~vi~~ 87 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYCGSMGDW------PLLTDEQRMEGVER 87 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEESSGGGTG------GGSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccCcCh------hhCCHHHHHHHHHH
Confidence 456788888888999998443 3332211 12344555556555
No 87
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=56.70 E-value=12 Score=33.46 Aligned_cols=72 Identities=15% Similarity=0.364 Sum_probs=47.8
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCCCCCccccccccCCChHHHHHHHHHHHHhcCC------ee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGAN------II 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGad------iI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++....+.. -+.-+..+++...+-+.|+. ++
T Consensus 193 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~SL~E----~d~~~~a~~ll~~a~~~g~~i~lPvD~v 267 (394)
T 1php_A 193 IGGAKVKDKIGVIDNLLEK-VDNLIIGGGLAYTFVKALGHDVGKSLLE----EDKIELAKSFMEKAKEKGVRFYMPVDVV 267 (394)
T ss_dssp ECSSCHHHHHHHHHHHTTT-CSEEEECTTHHHHHHHHTTCCCTTSCCC----GGGHHHHHHHHHHHHHHTCEEECCSEEE
T ss_pred EcCcchhhHHHHHHHHHHh-cCeeeeCcHHHHHHHHHcCCCCCccccc----hhhHHHHHHHHHHHHhcCCEEECCcchh
Confidence 56899988 668888886 57889999998766664 8887653211 12235666676666666865 45
Q ss_pred eccccc
Q 027947 73 ITASYQ 78 (216)
Q Consensus 73 ~TnTy~ 78 (216)
.+..|.
T Consensus 268 va~~f~ 273 (394)
T 1php_A 268 VADRFA 273 (394)
T ss_dssp EESSSS
T ss_pred hhhccC
Confidence 555553
No 88
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=56.25 E-value=71 Score=25.87 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=22.5
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
+.+|+.+.++=+.|.++||..|..+
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~~ 56 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVRIE 56 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcchHHHHHHHHHHCCCcEEEEC
Confidence 6788999999999999999998874
No 89
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=56.23 E-value=25 Score=31.70 Aligned_cols=66 Identities=14% Similarity=0.344 Sum_probs=45.8
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHH--CCCCCCCccccccccCCChHHHHHHHHHHHHhcCCee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELER--HGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANII 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~--~g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadiI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+ +|++....+.. -+.-+.++++....-+.|+.|+
T Consensus 213 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~~G~~iG~Sl~e----~d~~~~a~~il~~a~~~g~~i~ 282 (417)
T 3oz7_A 213 LGGAKVSDKIQLIKNLLDK-VDRMIIGGGMAYTFKKVLNNMKIGTSLFD----EAGSKIVGEIMEKAKAKNVQIF 282 (417)
T ss_dssp EECSCSTTSHHHHHHHHTT-CSEEEEETTHHHHHHHHHHCCCBTTSCCC----TTTHHHHHHHHHHHHHTTCEEE
T ss_pred EeCccHHHHHHHHHHHHHh-cCEEEeccHHHHHHHHHHcCCccCchhcC----ccChHHHHHHHHHHHHcCCEEE
Confidence 56999998 667788886 5788999999877665 49887654321 1223677777777667776543
No 90
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=55.50 E-value=26 Score=29.22 Aligned_cols=50 Identities=10% Similarity=-0.030 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-.+.++.|.+.|+|+|++=....- ..+++.+++..+.|++.
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~~iPVig 98 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEALSIPVIG 98 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHCCCCEEe
Confidence 578999999999999999999999997543211 13577777777788763
No 91
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=55.21 E-value=23 Score=27.71 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=31.3
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKML 211 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~ 211 (216)
++.+.++|+|++++=..+....+..+++++++.+.+++
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~ 107 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVV 107 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEE
Confidence 77788899999999888876667889999998875544
No 92
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=54.61 E-value=24 Score=31.29 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=25.5
Q ss_pred CCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
|.+|+-...+++ |-+.|||+++| |+ +..+++.|++.+.+
T Consensus 82 Lk~~~Gr~~l~~--Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L 120 (385)
T 4ed9_A 82 FRTEEGRELVRR--LVAEADVVIEN-FK--LGGLDKYGLDYESL 120 (385)
T ss_dssp TTSHHHHHHHHH--HHHTCSEEEEC-CC--TTTTGGGTCSHHHH
T ss_pred CCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 456655443332 34579999999 43 56677899987644
No 93
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=54.59 E-value=25 Score=28.85 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.+...+.++.|.+.|+|+|++=+...- ..+++.+++..+.|++.
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~---~~~~~~lr~~~~iPvig 91 (254)
T 1b73_A 42 RSKDTIIRYSLECAGFLKDKGVDIIVVACNTAS---AYALERLKKEINVPVFG 91 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---TTSHHHHHHHSSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEEe
Confidence 578899999999999999999999997543211 12456666666777763
No 94
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=54.26 E-value=13 Score=33.35 Aligned_cols=71 Identities=11% Similarity=0.266 Sum_probs=47.3
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCCCCCccccccccCCChHHHHHHHHHHHHhcCC------ee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGAN------II 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGad------iI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++....+.. -+.-+..+++...+-+.|+. ++
T Consensus 192 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~SL~E----~d~~~~a~~ll~ka~~~g~~i~lPvD~v 266 (398)
T 1vpe_A 192 LGGAKVSDKIGVITNLMEK-ADRILIGGAMMFTFLKALGKEVGSSRVE----EDKIDLAKELVEKAKEKGVEIVLPVDAV 266 (398)
T ss_dssp ECSSCHHHHHHHHHHHTTT-CSEEEECTTTHHHHHHHTSCCCTTSCCC----GGGHHHHHHHHHHHHHTTCEEECCSEEE
T ss_pred EcCcchhhHHHHHHHHHHh-cCeeEeCcHHHHHHHHHcCCCCCchhcC----hhhHHHHHHHHHHHHhcCCEEECCceee
Confidence 56899988 667888886 57889999998766664 8887653211 12235666676666666865 45
Q ss_pred ecccc
Q 027947 73 ITASY 77 (216)
Q Consensus 73 ~TnTy 77 (216)
.+..|
T Consensus 267 va~~f 271 (398)
T 1vpe_A 267 IAQKI 271 (398)
T ss_dssp EESSC
T ss_pred hhhcc
Confidence 55555
No 95
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=53.63 E-value=31 Score=31.28 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=26.2
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
.|.+|+-...+++ |-+.|||+++| |+ +..+++.|++.+.+
T Consensus 99 DLk~~eGr~~l~~--Li~~ADVvven-fR--PG~~erlGL~ye~L 138 (456)
T 3ubm_A 99 NTKTPEGKAVFEK--CIKWADILLEN-FR--PGAMERMGFTWEYL 138 (456)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEEC-CS--TTHHHHTTCCHHHH
T ss_pred eCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 3566664443332 33469999999 44 66788999987644
No 96
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=52.62 E-value=18 Score=32.69 Aligned_cols=61 Identities=16% Similarity=0.331 Sum_probs=41.8
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHH-CCCC-CCCccccccccCCCh---HHHHHHHHHHHHhcCC
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELER-HGAD-LNDPLWSAKCLVSSP---HLVRKVHLDYLDAGAN 70 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~-~g~~-~~~~~ws~~~ll~~p---e~V~~iH~~Yl~AGad 70 (216)
+-|+++|+ .-|..+|++ -+-+|+-|||+-.+.+ +|++ .... +-++ +..+++...+-+.|+.
T Consensus 139 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~TFl~A~G~~~IG~S-------L~E~d~~~~a~~ll~kak~~g~~ 206 (416)
T 1fw8_A 139 LGGAKVADKIQLIDNLLDK-VDSIIIGGGMAFTFKKVLENTEIGDS-------IFDKAGAEIVPKLMEKAKAKGVE 206 (416)
T ss_dssp EECSCSTTTHHHHHHHHTT-CSEEEEEGGGHHHHHHHHSCCCCCSC-------CCCHHHHHHHHHHHHHHHHHTCE
T ss_pred EcCcchhhHHHHHHHHHHh-hCeeEeChHHHHHHHHHcCCCccCcc-------ccChhhHHHHHHHHHHHHhcCCE
Confidence 56999998 668888886 5788999999955555 5888 6543 2233 4555555555555765
No 97
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=51.87 E-value=39 Score=28.89 Aligned_cols=93 Identities=24% Similarity=0.306 Sum_probs=53.9
Q ss_pred hhHHHHHHhcc--------CCeEEEecchHHHHHHCCCCCCCc-----------cccccccCCChHHHHHHHHHHHHhcC
Q 027947 9 TSFMTDFLQKC--------GGYSVVDGGFATELERHGADLNDP-----------LWSAKCLVSSPHLVRKVHLDYLDAGA 69 (216)
Q Consensus 9 ~~~l~~~l~~~--------~~~lllDGg~gT~L~~~g~~~~~~-----------~ws~~~ll~~pe~V~~iH~~Yl~AGa 69 (216)
+..+.+.|+.. ..+-++||-+-..|+..|+....+ +++ .+-..+|+..+++ .++|+
T Consensus 110 ~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~T-i~~v~~~eeA~am----A~agp 184 (286)
T 2p10_A 110 MSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLT-TPYVFSPEDAVAM----AKAGA 184 (286)
T ss_dssp HHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEE-CCEECSHHHHHHH----HHHTC
T ss_pred HHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeE-EEecCCHHHHHHH----HHcCC
Confidence 34455666652 134578999999999997654211 222 2335677777654 79999
Q ss_pred Ceee---ccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 027947 70 NIII---TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEA 108 (216)
Q Consensus 70 diI~---TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A 108 (216)
|+|. .-|..-.... ...++.++..++++..++.+++.
T Consensus 185 DiI~~h~glT~gglIG~--~~avs~~~~~e~i~~i~~a~~~v 224 (286)
T 2p10_A 185 DILVCHMGLTTGGAIGA--RSGKSMDDCVSLINECIEAARTI 224 (286)
T ss_dssp SEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCcccC--CCcccHHHhHHHHHHHHHHHHHh
Confidence 9876 3333322221 22345566667777777777765
No 98
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=51.15 E-value=27 Score=28.39 Aligned_cols=94 Identities=15% Similarity=0.066 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHH
Q 027947 88 GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLK 167 (216)
Q Consensus 88 g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~ 167 (216)
|++.....++.++-++..+...+. ...+.+|.-|+ ++.... .+...-+.+++.
T Consensus 10 Gmg~~at~~~~~~i~~~~~~~~~~------------------~h~~~~~~~s~-~~~~~~--------~~~~~~~~~~~~ 62 (231)
T 3ojc_A 10 GMSWESTIPYYRMINQHVKAQLGG------------------LHSAKIILYSV-DFHEIE--------QLQAKGDWQTAA 62 (231)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHCT------------------TCCCCEEEEEC-CHHHHH--------HHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhHHhcCC------------------CCCccceeeCC-ChhhHH--------HHHHCCChhHHH
Confidence 677766667777777666543321 12244555554 332210 000112568888
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 168 EFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
.+-.+.++.|.+.|+|+|++=+...- .+++.+++..+.|++
T Consensus 63 ~~l~~~~~~L~~~g~~~iviaCNTa~----~~~~~l~~~~~iPvi 103 (231)
T 3ojc_A 63 QLLSNAAISLKHAGAEVIVVCTNTMH----KVADDIEAACGLPLL 103 (231)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSGGG----GGHHHHHHHHCSCBC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCchH----HHHHHHHHhCCCCEe
Confidence 99999999999999999998754411 123556665567765
No 99
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=48.59 E-value=9.7 Score=33.28 Aligned_cols=25 Identities=32% Similarity=0.321 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
++....|.+.+..+-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5667789999999999999999874
No 100
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=47.33 E-value=1.3e+02 Score=25.31 Aligned_cols=40 Identities=20% Similarity=0.170 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~ 207 (216)
+++.+.++.+.+.|+|.|.+- |+ -.+.++...++++++.-
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 455666888899999998775 33 47889999999888754
No 101
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=47.27 E-value=1.5e+02 Score=26.00 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHhcCCee-eccccccCHHHHHhcCCCHHHHHHHHHHHHHH
Q 027947 53 SPHLVRKVHLDYLDAGANII-ITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI-~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (216)
+.+.++++-+-++++|++-| ..-|=+=. .-++.++-.++++.+++.
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~------~~Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEG------QLMSWDEHIMLIGHTVNC 124 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccCh------hhCCHHHHHHHHHHHHHH
Confidence 34688888888889999943 33333211 124555666666666554
No 102
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=47.25 E-value=1.4e+02 Score=25.95 Aligned_cols=107 Identities=12% Similarity=-0.014 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (216)
+++.|+. -+++|+++|.... .+|.......+.+.++..+....+++.|++. +.
T Consensus 76 ~~~di~~----a~~~g~~~v~i~~-~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~----------------------g~ 128 (382)
T 2ztj_A 76 RLDAAKV----AVETGVQGIDLLF-GTSKYLRAPHGRDIPRIIEEAKEVIAYIREA----------------------AP 128 (382)
T ss_dssp CHHHHHH----HHHTTCSEEEEEE-CC--------CCCHHHHHHHHHHHHHHHHHH----------------------CT
T ss_pred ChhhHHH----HHHcCCCEEEEEe-ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHc----------------------CC
Confidence 4555544 4568999766432 1222211245667666555566666666543 21
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHh
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIIN 206 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~ 206 (216)
...|..|+- ++ + ..+. +|+.+.++.+.+. +|.|.+= |+ -.+.++..+++++++.
T Consensus 129 ~~~v~~~~e-------d~------~--~~~~----~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 129 HVEVRFSAE-------DT------F--RSEE----QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRV 185 (382)
T ss_dssp TSEEEEEET-------TT------T--TSCH----HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEE-------eC------C--CCCH----HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHh
Confidence 234444432 11 0 1233 4566778888899 9998664 43 3688999999999875
No 103
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=47.23 E-value=10 Score=33.30 Aligned_cols=25 Identities=36% Similarity=0.493 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
++....|.+.+..+-+||||+|.|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 5667799999999999999999874
No 104
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=47.17 E-value=11 Score=32.92 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
++....|.+.+..+-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5667799999999999999999874
No 105
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=46.86 E-value=36 Score=31.82 Aligned_cols=42 Identities=19% Similarity=0.369 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCCCEEEEecCC-CHHHHHHHHHHHHHhC-Cccc
Q 027947 170 HRRRVLILANSGADLIAFETIP-NKLEAKVFSKYVIINQ-RKML 211 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~a~~~~~-~~~~ 211 (216)
..+++++|+++|||+|++.|-. +-.-....++.+++.. +.||
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~v 325 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDV 325 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceE
Confidence 4568999999999999999764 3334455666666653 3443
No 106
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=46.79 E-value=11 Score=32.86 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=0.0
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCeeecc
Q 027947 45 WSAKCLVSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 45 ws~~~ll~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
| ++....|.+.+..+-+||||+|.|.
T Consensus 286 w-----iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 286 A-----IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp S-----SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred C-----ccHHHHHHHHHHHHHhcCCCEEeeh
No 107
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=46.32 E-value=75 Score=26.80 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=43.7
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCC---------HHHHHHHHHHH
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPN---------KLEAKVFSKYV 203 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~---------~~Ea~a~~~a~ 203 (216)
+.+|-|=|-++++.+.+|..| .+.+++.+ +++.+++.|+|+|=+-.-++ .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 567889999999988776432 34555544 57778889999997665433 77877766666
Q ss_pred HHh
Q 027947 204 IIN 206 (216)
Q Consensus 204 ~~~ 206 (216)
+..
T Consensus 83 ~~l 85 (282)
T 1aj0_A 83 EAI 85 (282)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 108
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=46.21 E-value=1.4e+02 Score=25.50 Aligned_cols=42 Identities=12% Similarity=0.157 Sum_probs=23.0
Q ss_pred HHHHHHHHhcCCeeec-cccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 027947 59 KVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEA 108 (216)
Q Consensus 59 ~iH~~Yl~AGadiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A 108 (216)
+.-+.+++||||+|.- .+|.. -++++..+++.....+-..+.
T Consensus 197 ~~~~~~~~aGad~i~i~D~~~~--------~lsp~~f~ef~~p~~~~i~~~ 239 (359)
T 2inf_A 197 VYVKAQIKAGAKAIQIFDSWVG--------ALNQADYRTYIKPVMNRIFSE 239 (359)
T ss_dssp HHHHHHHHTTCSEEEEECTTGG--------GSCHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCCccc--------cCCHHHHHHHhHHHHHHHHHH
Confidence 3445566789998763 33432 245555555555555444433
No 109
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=46.08 E-value=1.7e+02 Score=26.44 Aligned_cols=44 Identities=18% Similarity=0.071 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhCCccc
Q 027947 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQRKML 211 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~~~~~ 211 (216)
+++.+.++.+.++|+|.|.+= |. -...++..++.++++.-+.|+
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i 204 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVEL 204 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeE
Confidence 467777899999999999764 43 368899999999988654443
No 110
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=44.91 E-value=12 Score=33.01 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~Tn 75 (216)
++....|.+.+..+-+||||+|.|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 5667799999999999999999873
No 111
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=44.51 E-value=26 Score=30.19 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=24.0
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
+++..+++|+|.|++.+|+ +.+++.+++.++
T Consensus 219 e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~ 249 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMS-ISEIKKAVDIVN 249 (300)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHhhc
Confidence 3444456899999999987 588888888765
No 112
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=43.61 E-value=85 Score=26.13 Aligned_cols=50 Identities=10% Similarity=-0.157 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 161 VSLETLKEFHRRRVLILAN-SGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~-~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+++.++-...++.+.+ .|+|+|++=....- ..+++.+++..+.|++.
T Consensus 63 ~s~~~i~~~~~~i~~~ll~~~g~d~IviaCNTas---~~~l~~lr~~~~iPVig 113 (285)
T 2jfn_A 63 KSEAFIVERVVAIVTAVQERYPLALAVVACNTAS---TVSLPALREKFDFPVVG 113 (285)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHCSSCEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEEEECcccc---HHHHHHHHHhCCCCEEe
Confidence 5789999998888888766 89999997543211 13677888877888763
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=43.44 E-value=78 Score=28.89 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=0.0
Q ss_pred HHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecC
Q 027947 62 LDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141 (216)
Q Consensus 62 ~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiG 141 (216)
...+++|+|+|.-++-+.+... .+++.+++++.| +.-..|+|.++
T Consensus 262 ~aLveaGvd~I~Id~a~g~~~~-----------------v~~~i~~i~~~~------------------~~~~vi~g~v~ 306 (511)
T 3usb_A 262 DALVKASVDAIVLDTAHGHSQG-----------------VIDKVKEVRAKY------------------PSLNIIAGNVA 306 (511)
T ss_dssp HHHHHTTCSEEEEECSCTTSHH-----------------HHHHHHHHHHHC------------------TTSEEEEEEEC
T ss_pred HHHHhhccceEEecccccchhh-----------------hhhHHHHHHHhC------------------CCceEEeeeec
Q ss_pred CcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE----ec-----------CCCHHHHHHHHHHHHHh
Q 027947 142 SYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF----ET-----------IPNKLEAKVFSKYVIIN 206 (216)
Q Consensus 142 P~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~----ET-----------~p~~~Ea~a~~~a~~~~ 206 (216)
.... ++.+.++|||+|.+ .+ .|.+.-+..+.+++++.
T Consensus 307 t~e~----------------------------a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~ 358 (511)
T 3usb_A 307 TAEA----------------------------TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH 358 (511)
T ss_dssp SHHH----------------------------HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred cHHH----------------------------HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC
Q ss_pred CCcccc
Q 027947 207 QRKMLL 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
+ .||+
T Consensus 359 ~-iPVI 363 (511)
T 3usb_A 359 G-IPVI 363 (511)
T ss_dssp T-CCEE
T ss_pred C-CcEE
No 114
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=42.94 E-value=92 Score=27.53 Aligned_cols=46 Identities=13% Similarity=0.026 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCC-----------CHHHHHHHHHHHHHhCCcccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIP-----------NKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p-----------~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
|.+.+. +.++.+.++|+|++-+-++- ..+..+.+.++.++.+ .|++
T Consensus 154 s~e~a~----~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G-l~~~ 210 (385)
T 3nvt_A 154 SYEQVA----AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG-LGVI 210 (385)
T ss_dssp CHHHHH----HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT-CEEE
T ss_pred CHHHHH----HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC-CEEE
Confidence 455444 44888889999999888742 3556666666666665 5554
No 115
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=42.76 E-value=1.5e+02 Score=25.15 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=22.6
Q ss_pred HHHHHHHHhcCCeeec-cccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 027947 59 KVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109 (216)
Q Consensus 59 ~iH~~Yl~AGadiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~ 109 (216)
+..+.+++||||+|.- .+|.. -++++..+++.....+-..+..
T Consensus 197 ~~~~~~~~aGad~iqi~D~~~~--------~lsp~~f~ef~~p~~~~i~~~i 240 (353)
T 1j93_A 197 KYIRYQADSGAQAVQIFDSWAT--------ELSPVDFEEFSLPYLKQIVDSV 240 (353)
T ss_dssp HHHHHHHHTTCSEEEEECGGGG--------GSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCcccc--------cCCHHHHHHHhHHHHHHHHHHH
Confidence 3445566789998763 34521 1344555555544444443333
No 116
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=42.57 E-value=32 Score=27.34 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=29.9
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKM 210 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~ 210 (216)
++.+.++|+|++.+=..+....++.+++++++.+.++
T Consensus 76 ~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp HHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 5778889999999988877655788889998887655
No 117
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=42.17 E-value=14 Score=33.31 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=43.1
Q ss_pred CCCCCCCh--hHHHHHHhcc-CCeEEEecchHHHHHHC-CCCCCCc---cccccccCCChHHHHHHHHHHHHhcCCeee
Q 027947 2 VSGSNGTT--SFMTDFLQKC-GGYSVVDGGFATELERH-GADLNDP---LWSAKCLVSSPHLVRKVHLDYLDAGANIII 73 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~-~~~lllDGg~gT~L~~~-g~~~~~~---~ws~~~ll~~pe~V~~iH~~Yl~AGadiI~ 73 (216)
+-|+++|+ .-|..++++. -+-+|+-|||+-.+.+. |++.... +....-.++.-+..+++...+ |+.|+.
T Consensus 196 lGGaKVsdKi~vi~nLl~k~~vD~liiGGgma~tFl~A~G~~iG~S~~~l~E~~g~~d~~~~a~~ll~ka---g~~i~l 271 (410)
T 2cun_A 196 LGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDEF---YPYIRT 271 (410)
T ss_dssp ECSSCHHHHHHHHHHHHHTTSCSEEEECHHHHHHHHHHHTCCCCHHHHHHHHTTTGGGGHHHHHHHHHHH---GGGEEC
T ss_pred EcCcchhhHHHHHHHHhcccCCCEEEEChHHHHHHHHHcCCCcCcchhhhhhcccchhhHHHHHHHHHhc---cCeEeC
Confidence 56899988 6677888851 27789999999776665 8887543 221111112335566665554 876543
No 118
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=41.81 E-value=60 Score=27.82 Aligned_cols=40 Identities=25% Similarity=0.248 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~ 207 (216)
+++.+.++.+.+.|+|.|.+- |+ -.+.++..+++++++.-
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 455666888888999998765 33 36788999999988754
No 119
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=41.18 E-value=1.2e+02 Score=26.70 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=25.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEE
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIA 186 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~ 186 (216)
..+.+++...|++|++...+.|...|+
T Consensus 129 ~~~l~~V~~AY~EQ~~~Ve~~G~~~IL 155 (396)
T 4dnh_A 129 DVSIDDILAAYESQIEAIEAEGGRIIL 155 (396)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 358999999999999999999999998
No 120
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=40.75 E-value=22 Score=31.87 Aligned_cols=66 Identities=26% Similarity=0.367 Sum_probs=43.6
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHH-CCCCCCCccccccccCCChHHHHHHHHHHHHhcCCee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELER-HGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANII 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~-~g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadiI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+ .|++....+.. -+.-+..+++....-+.|+.|+
T Consensus 192 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~Sl~E----~d~~~~a~~il~~a~~~g~~i~ 260 (395)
T 4fey_A 192 VGGSKVSTKLSVLNNLLDK-VEILIVGGGIANTFIKAEGFDVGNSLYE----QDLVAEATEILAKAKALGVNIP 260 (395)
T ss_dssp EEESCHHHHHHHHHHHTTT-CSEEEEEEHHHHHHHHHTTCCCTTCCCC----GGGHHHHHHHHHHHHHTTCBCC
T ss_pred EeCccHHHHHHHHHHHHHh-cCEEEEChHHHHHHHHHcCCccCccccc----hhhHHHHHHHHHHHHHcCCEEE
Confidence 45888888 557788885 5778899999877665 48887654311 0122566666666666676643
No 121
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=40.36 E-value=30 Score=31.09 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=42.2
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHH-CCCCCCCccccccccCCChHHHHHHHHHHHHhcCCee
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELER-HGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANII 72 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~-~g~~~~~~~ws~~~ll~~pe~V~~iH~~Yl~AGadiI 72 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+ +|++....+.. -+.-+..+++...--+.|+.|+
T Consensus 200 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~Sl~e----~d~~~~a~~ll~~a~~~g~~i~ 268 (403)
T 3q3v_A 200 VGGSKVSGKLQALTNLLPK-VDKLIIGGGMAFTFLKALGYDIGNSLLE----EELLEEANKILTKGKNLGVKIY 268 (403)
T ss_dssp ECSSCHHHHHHHHHHHTTT-CSEEEECSTTHHHHHHHTTCCCTTSCCC----GGGHHHHHHHHHHHHHTTCEEE
T ss_pred EeCccHHHHHHHHHHHHHh-cCEEEECcHHHHHHHHHcCCCcCccccc----hhhHHHHHHHHHHHHHcCCEEE
Confidence 56889988 557788885 5788999999876655 58887654321 1122455555544445676543
No 122
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=40.13 E-value=57 Score=28.50 Aligned_cols=41 Identities=22% Similarity=0.118 Sum_probs=29.1
Q ss_pred ccCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 49 ~ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
+.+.+|+-...+++ |-+.|||+++|-- +..+++.|++.+.+
T Consensus 59 lDLk~~~gr~~l~~--Lv~~ADV~venfr---PG~~~rlGl~ye~L 99 (360)
T 2yim_A 59 ADLKSDQGLELALK--LIAKADVLIEGYR---PGVTERLGLGPEEC 99 (360)
T ss_dssp CCTTSHHHHHHHHH--HHTTCSEEEECSC---TTHHHHHTCSHHHH
T ss_pred EeCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHHH
Confidence 34678876655554 4577999999853 56778899986644
No 123
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=39.96 E-value=1e+02 Score=25.85 Aligned_cols=43 Identities=12% Similarity=-0.008 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.+++... +..|.++|++.+-+|--. |....++++.+.+ .||.
T Consensus 92 ~~~~a~~~----a~rl~kaGa~aVklEgg~---e~~~~I~al~~ag-ipV~ 134 (264)
T 1m3u_A 92 TPEQAFEN----AATVMRAGANMVKIEGGE---WLVETVQMLTERA-VPVC 134 (264)
T ss_dssp SHHHHHHH----HHHHHHTTCSEEECCCSG---GGHHHHHHHHHTT-CCEE
T ss_pred CHHHHHHH----HHHHHHcCCCEEEECCcH---HHHHHHHHHHHCC-CCeE
Confidence 45554433 445666999999999863 5555666666654 5553
No 124
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=39.67 E-value=1.7e+02 Score=24.56 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=28.0
Q ss_pred cCCChHHH-----------HHHHHHHHHhcCCeeec-cccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 027947 50 LVSSPHLV-----------RKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109 (216)
Q Consensus 50 ll~~pe~V-----------~~iH~~Yl~AGadiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~ 109 (216)
+.++||.+ .+.-+.+++||||+|.- .+|.. -++++..+++..-..+-..+..
T Consensus 163 ~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~d~~~~--------~lsp~~f~ef~~p~~k~i~~~i 226 (338)
T 2eja_A 163 MWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQIFDSWVN--------NLSLEDYGEYVYPYVNYLISEL 226 (338)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGG--------GSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccc--------cCCHHHHHHHhHHHHHHHHHHH
Confidence 35788743 33445566789998763 33321 1355555555555554444433
No 125
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=39.02 E-value=26 Score=28.23 Aligned_cols=39 Identities=26% Similarity=0.227 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Q 027947 171 RRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKM 210 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~ 210 (216)
.+.++.+.++|+|.+.+-+++. .+...+++++++.+.+.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g~~~ 136 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEGIKT 136 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhCCCe
Confidence 4568888889999999988875 57788888888876443
No 126
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=38.64 E-value=1.2e+02 Score=25.79 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=42.9
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCC---------CHHHHHHHH---
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP---------NKLEAKVFS--- 200 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p---------~~~Ea~a~~--- 200 (216)
+.+|-|=+=-+.+.+.||..| .+.+++. .+++.+++.|+|+|=+-.-+ .-+|++.++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAAV----RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHHH----HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHHH----HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 457788777777777665321 2334433 45777788999999776433 267777666
Q ss_pred HHHHHhCCcccc
Q 027947 201 KYVIINQRKMLL 212 (216)
Q Consensus 201 ~a~~~~~~~~~~ 212 (216)
+++++..+.|+-
T Consensus 108 ~~l~~~~~vpiS 119 (297)
T 1tx2_A 108 QAVSKEVKLPIS 119 (297)
T ss_dssp HHHHHHSCSCEE
T ss_pred HHHHhcCCceEE
Confidence 444544456653
No 127
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=38.40 E-value=63 Score=29.01 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCCEEEEecC-CCHHHHHHHHHHHHHhC-Cccccc
Q 027947 170 HRRRVLILANSGADLIAFETI-PNKLEAKVFSKYVIINQ-RKMLLK 213 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~a~~~~~-~~~~~~ 213 (216)
+.++++.+.++|+|.|.+-+. -+.......++++++.. ..|++.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~ 283 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVA 283 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEe
Confidence 356889999999999998553 34455667778888764 577653
No 128
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=38.37 E-value=35 Score=30.76 Aligned_cols=40 Identities=18% Similarity=0.418 Sum_probs=31.8
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCC-CCC
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GAD-LND 42 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~-~~~ 42 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++ ...
T Consensus 209 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~TFl~A~G~~~iG~ 252 (415)
T 1qpg_A 209 LGGAKVADKIQLIDNLLDK-VDSIIIGGGMAFTFKKVLENTEIGD 252 (415)
T ss_dssp ECSSCSGGGHHHHHHHTTT-CSEEEECGGGHHHHHHHHSCCCCCS
T ss_pred EcCcchhhHHHHHHHHHHh-cCEEEeChHHHHHHHHHcCCCcccc
Confidence 57999998 668888886 57889999998776665 888 653
No 129
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=38.33 E-value=17 Score=30.63 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=25.6
Q ss_pred ccCCChHHHHHHHHHHHHhcCCeeeccc-cc
Q 027947 49 CLVSSPHLVRKVHLDYLDAGANIIITAS-YQ 78 (216)
Q Consensus 49 ~ll~~pe~V~~iH~~Yl~AGadiI~TnT-y~ 78 (216)
.+|+++|.++..-+-=+++|||.|.|.| |.
T Consensus 144 ~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~ 174 (260)
T 1p1x_A 144 GELKDEALIRKASEISIKAGADFIKTSTGKV 174 (260)
T ss_dssp HHHCSHHHHHHHHHHHHHTTCSEEECCCSCS
T ss_pred ccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 3457888898999999999999999998 53
No 130
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=38.21 E-value=50 Score=29.00 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCCCEEEEecCC-CHHHHHHHHHHHHHhC-Ccccc
Q 027947 170 HRRRVLILANSGADLIAFETIP-NKLEAKVFSKYVIINQ-RKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~a~~~~~-~~~~~ 212 (216)
+.++++.++++|||+|.+.|.. +..+....++.+++.. ..|++
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi 153 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEII 153 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 3457889999999999998754 3445666677777664 55654
No 131
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=37.90 E-value=45 Score=28.71 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhC---CCCEEEEecCCCHHH---HHHHHHHHHH
Q 027947 167 KEFHRRRVLILANS---GADLIAFETIPNKLE---AKVFSKYVII 205 (216)
Q Consensus 167 ~~~h~~qi~~l~~~---gvD~l~~ET~p~~~E---a~a~~~a~~~ 205 (216)
.++|+.|++++..+ |.+.|++--+.+..| ++.+++.++.
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~ 162 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKA 162 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 37888899988775 999999999999999 5555554443
No 132
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=37.73 E-value=1.5e+02 Score=25.65 Aligned_cols=46 Identities=11% Similarity=-0.065 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEe-----cCCCHHHHHHHHHHHHHhCCccccc
Q 027947 167 KEFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 167 ~~~h~~qi~~l~~~g--vD~l~~E-----T~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.+.+...++.|.+.| +|.|-+. ..|++.+++.+++.+...+ +||.+
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G-l~i~i 253 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLG-LDNQV 253 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT-CEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcC-CcEEE
Confidence 344566788888878 5998764 3478999999999988776 56643
No 133
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=37.41 E-value=1.8e+02 Score=25.93 Aligned_cols=41 Identities=5% Similarity=-0.096 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCEEEEe-cC--CCHHHHHHHHHHHHHhCCcc
Q 027947 170 HRRRVLILANSGADLIAFE-TI--PNKLEAKVFSKYVIINQRKM 210 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~a~~~~~~~~ 210 (216)
+.+.++.+.+.|+|.|.+= |+ -.+.++..+++.+++.-..|
T Consensus 182 ~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~ 225 (423)
T 3ivs_A 182 LLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCD 225 (423)
T ss_dssp HHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCe
Confidence 4556788888999988654 43 36778888888888754433
No 134
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=37.24 E-value=1.4e+02 Score=26.16 Aligned_cols=27 Identities=19% Similarity=0.081 Sum_probs=19.2
Q ss_pred CCChHHHHHHHHHHHHhcCCeeecccc
Q 027947 51 VSSPHLVRKVHLDYLDAGANIIITASY 77 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~AGadiI~TnTy 77 (216)
+..++...+.-+.-+++|+|+|+..+-
T Consensus 95 ~g~~~~~~e~~~~a~~aGvdvI~id~a 121 (361)
T 3r2g_A 95 VGCTENELQRAEALRDAGADFFCVDVA 121 (361)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred cCCCHHHHHHHHHHHHcCCCEEEEeCC
Confidence 444555566677788999999987653
No 135
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=37.13 E-value=40 Score=28.78 Aligned_cols=31 Identities=6% Similarity=0.102 Sum_probs=23.9
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
+++..+++|+|.|.+.+|+ +.+++.+++.++
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~ 240 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIAR 240 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhc
Confidence 4444556899999999977 578888887765
No 136
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=35.99 E-value=53 Score=27.40 Aligned_cols=47 Identities=13% Similarity=-0.051 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCC-EEEEec-----------CCCHHHHHHHHHHHHHhCCccccccc
Q 027947 169 FHRRRVLILANSGAD-LIAFET-----------IPNKLEAKVFSKYVIINQRKMLLKKF 215 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD-~l~~ET-----------~p~~~Ea~a~~~a~~~~~~~~~~~~~ 215 (216)
.|.+.++.+.++|+| .|-+-- ..+.+.+..+++++++..+.||+.|.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi 165 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKL 165 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 366678888899999 886632 12666778888889888788998764
No 137
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=35.75 E-value=11 Score=23.51 Aligned_cols=17 Identities=24% Similarity=0.495 Sum_probs=14.0
Q ss_pred CCChHHHHHHHHHHHHh
Q 027947 51 VSSPHLVRKVHLDYLDA 67 (216)
Q Consensus 51 l~~pe~V~~iH~~Yl~A 67 (216)
-++++-|.++|+.|++.
T Consensus 23 knD~~Fl~~iHeAYl~s 39 (46)
T 2wx4_A 23 QNDKEFANKLHKAYLNG 39 (46)
T ss_dssp HHCTTHHHHHHHHHHC-
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 46788999999999975
No 138
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=35.75 E-value=67 Score=28.81 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=21.8
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
.|.+|+-...+++ |-+.|||+++|-- +..+++.|++.+.+
T Consensus 75 DLk~~eGr~~l~~--Lv~~ADVlienfr---PGv~~rlGL~ye~L 114 (428)
T 1q7e_A 75 NTKTAEGKEVMEK--LIREADILVENFH---PGAIDHMGFTWEHI 114 (428)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEECCC---C-------CCHHHH
T ss_pred eCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHHH
Confidence 3567765554444 4566999999954 56677889986643
No 139
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=35.50 E-value=1.3e+02 Score=26.38 Aligned_cols=45 Identities=16% Similarity=-0.024 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCC--CEEEEe-----cCCCHHHHHHHHHHHHHhCCccccc
Q 027947 168 EFHRRRVLILANSGA--DLIAFE-----TIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 168 ~~h~~qi~~l~~~gv--D~l~~E-----T~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
+.+..+++.|.+.|| |.|-+. ..|++.+++.+++.+...+ +||.+
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lG-lpI~i 263 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALG-LDNQI 263 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHTT-CEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhcC-CeEEE
Confidence 445567888888885 999774 3478899999999998877 56643
No 140
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=35.41 E-value=3e+02 Score=26.30 Aligned_cols=40 Identities=5% Similarity=0.084 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEec---CCCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFET---IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~a~~~~~ 207 (216)
+|+.+.++.+.++|+|.|.+=- +-...++..++.++++.-
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhC
Confidence 4677778899999999997763 336889999999998865
No 141
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=35.09 E-value=76 Score=28.84 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=29.5
Q ss_pred HHHHHHHHhCCCCEEEEecCC-CHHHHHHHHHHHHHhC-Ccccc
Q 027947 171 RRRVLILANSGADLIAFETIP-NKLEAKVFSKYVIINQ-RKMLL 212 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~a~~~~~-~~~~~ 212 (216)
.++++.+.++|+|+|.+-+-. +.......++.+++.. +.|++
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi 276 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEII 276 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEE
Confidence 346888899999999987643 3445556677777654 56764
No 142
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=34.48 E-value=40 Score=30.08 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=29.8
Q ss_pred HHHHHHHHhCCCCEEEEecCC-CHHHHHHHHHHHHHhCCcccc
Q 027947 171 RRRVLILANSGADLIAFETIP-NKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
.+++++++++|||+|.+.|-. +.......++.+++....|++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi 188 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVI 188 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEE
Confidence 457899999999999987543 444556667777765456665
No 143
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=34.42 E-value=21 Score=22.65 Aligned_cols=18 Identities=17% Similarity=0.396 Sum_probs=15.5
Q ss_pred cCCChHHHHHHHHHHHHh
Q 027947 50 LVSSPHLVRKVHLDYLDA 67 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~A 67 (216)
+-++++-|.+||+.|+..
T Consensus 24 IqnD~~Fl~~IHeAYl~s 41 (51)
T 2wx3_A 24 IKNDSSFLSTLHEVYLQV 41 (51)
T ss_dssp HHHCHHHHHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHHHHH
Confidence 347889999999999986
No 144
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=33.93 E-value=1.6e+02 Score=23.14 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCC
Q 027947 163 LETLKEFHRRRVLILANSGADLIAFETIP 191 (216)
Q Consensus 163 ~ee~~~~h~~qi~~l~~~gvD~l~~ET~p 191 (216)
.+.+.+..++.++...+.||. |.+|+++
T Consensus 117 ~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~ 144 (281)
T 3u0h_A 117 ISQLARRIRQVAVELLPLGMR-VGLEYVG 144 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTCE-EEEECCC
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEecc
Confidence 445556666666666778997 5569874
No 145
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=33.66 E-value=37 Score=28.19 Aligned_cols=33 Identities=9% Similarity=0.070 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 172 RRVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
.+++.+++.|+|.|++=-+.+..|++.++++++
T Consensus 81 ~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~ 113 (267)
T 2vws_A 81 PLIKQVLDIGAQTLLIPMVDTAEQARQVVSATR 113 (267)
T ss_dssp HHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHc
Confidence 456778889999999999999999999988875
No 146
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=33.43 E-value=2.3e+02 Score=24.20 Aligned_cols=24 Identities=29% Similarity=0.212 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEe
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~E 188 (216)
.+.++. ...++.|.+.|+|+|-+=
T Consensus 236 ~~~~~~----~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 236 WSLEDT----LAFARRLKELGVDLLDCS 259 (349)
T ss_dssp CCHHHH----HHHHHHHHHTTCCEEEEE
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEEe
Confidence 455654 445888999999999764
No 147
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=33.35 E-value=19 Score=30.78 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=25.6
Q ss_pred ccCCChHHHHHHHHHHHHhcCCeeeccc-cc
Q 027947 49 CLVSSPHLVRKVHLDYLDAGANIIITAS-YQ 78 (216)
Q Consensus 49 ~ll~~pe~V~~iH~~Yl~AGadiI~TnT-y~ 78 (216)
.+|+++|.|+..-+-=++||||.|.|.| |.
T Consensus 166 ~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 166 GELKTEDLIIKTTLAVLNGNADFIKTSTGKV 196 (281)
T ss_dssp HHHCSHHHHHHHHHHHHTTTCSEEECCCSCS
T ss_pred ccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 3468889898998989999999999998 53
No 148
>2eqa_A Hypothetical protein ST1526; YRDC/RIBB fold, YRDC domain, SUA5 domain, structural genomics, NPPSFA; HET: AMP; 1.80A {Sulfolobus tokodaii} PDB: 3aje_A* 4e1b_A*
Probab=33.05 E-value=86 Score=27.43 Aligned_cols=47 Identities=11% Similarity=-0.068 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCC
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQR 208 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~ 208 (216)
+.+++..---..++.|-+.|+|.|++|.+|.-....|+..-+++...
T Consensus 290 ~~~~~a~~Lf~~Lr~~D~~~~~~i~~e~~~~~g~g~Ai~nRL~kAa~ 336 (352)
T 2eqa_A 290 NLYEVARNLFDSFRELDKLNVDLGIMIGFPERGIGFAIMNRARKASG 336 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSEEEEECCCCSTTHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhccCCCEEEEeCCCCcChHHHHHHHHHHhcC
Confidence 45555544445677887789999999999998888899998888754
No 149
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=32.84 E-value=33 Score=27.93 Aligned_cols=26 Identities=19% Similarity=0.429 Sum_probs=23.0
Q ss_pred ChHHHHHHHHHHHHhcCCeeeccc-cc
Q 027947 53 SPHLVRKVHLDYLDAGANIIITAS-YQ 78 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~TnT-y~ 78 (216)
+++.+...-+-=.++|||+|.|.| |.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 478888888889999999999999 75
No 150
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=32.63 E-value=2e+02 Score=24.06 Aligned_cols=33 Identities=12% Similarity=-0.071 Sum_probs=22.9
Q ss_pred HHHHHhCCCCEEEEecCC--------CHHHHHHHHHHHHHh
Q 027947 174 VLILANSGADLIAFETIP--------NKLEAKVFSKYVIIN 206 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~a~~~~ 206 (216)
++.|.++|++.+-+|--. +..|...-++++++.
T Consensus 98 v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a 138 (275)
T 2ze3_A 98 VEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAA 138 (275)
T ss_dssp HHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHh
Confidence 677778999999999764 345555555555554
No 151
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=31.78 E-value=70 Score=27.10 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=24.3
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHHHH
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYVII 205 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~ 205 (216)
++..+++|+|.|++.+|+ +.+++.+++.++.
T Consensus 206 a~eA~~aGaD~I~LDn~~-~e~l~~av~~l~~ 236 (285)
T 1o4u_A 206 ALRAVEAGADIVMLDNLS-PEEVKDISRRIKD 236 (285)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhhc
Confidence 333455899999999975 7888888888875
No 152
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=31.31 E-value=40 Score=29.00 Aligned_cols=28 Identities=18% Similarity=0.353 Sum_probs=24.4
Q ss_pred ccCCChHHHHHHHHHHHHhcCCeeeccc
Q 027947 49 CLVSSPHLVRKVHLDYLDAGANIIITAS 76 (216)
Q Consensus 49 ~ll~~pe~V~~iH~~Yl~AGadiI~TnT 76 (216)
.+|++.+.+++.-+-=++||||.|.|.|
T Consensus 160 ~~Lt~~e~i~~A~~ia~~AGADFVKTST 187 (297)
T 4eiv_A 160 GELQGGDIISRAAVAALEGGADFLQTSS 187 (297)
T ss_dssp SCCCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred ccCCcHHHHHHHHHHHHHhCCCEEEcCC
Confidence 4578888888888888999999999999
No 153
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=30.90 E-value=40 Score=28.46 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=28.9
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
+++.+++.|+|.|++=-+.+..|++.++++++
T Consensus 103 di~~~ld~ga~~ImlP~V~saeea~~~~~~~~ 134 (287)
T 2v5j_A 103 QIKQLLDVGTQTLLVPMVQNADEAREAVRATR 134 (287)
T ss_dssp HHHHHHHTTCCEEEESCCCSHHHHHHHHHHTS
T ss_pred HHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhc
Confidence 68888899999999999999999999988765
No 154
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=30.66 E-value=3.2e+02 Score=25.16 Aligned_cols=40 Identities=23% Similarity=0.043 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-c--CCCHHHHHHHHHHHHHhC
Q 027947 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T--~p~~~Ea~a~~~a~~~~~ 207 (216)
+++.+.++.+.+.|+|.|.+= | +-...++..+++++++.-
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhc
Confidence 467777899999999999764 3 346889999999998754
No 155
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.48 E-value=1.5e+02 Score=24.92 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=42.0
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC---C------CHHHHHHHHHHH
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---P------NKLEAKVFSKYV 203 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~---p------~~~Ea~a~~~a~ 203 (216)
+.+|-|=+--+.+.+.||..| .+.+++.+ +++.+++.|+|+|=+-.. | .-+|+..++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAVK----HGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHHH----HHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 457888888888888776432 35565554 577788899999966542 2 256666666666
Q ss_pred HHhC--Cccc
Q 027947 204 IINQ--RKML 211 (216)
Q Consensus 204 ~~~~--~~~~ 211 (216)
+... +.|+
T Consensus 74 ~~l~~~~~pi 83 (280)
T 1eye_A 74 KELAAQGITV 83 (280)
T ss_dssp HHHHHTTCCE
T ss_pred HHhhcCCCEE
Confidence 5543 4444
No 156
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=30.29 E-value=74 Score=27.71 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCCCEEEEecCC-CHHHHHHHHHHHHHhCCcccc
Q 027947 171 RRRVLILANSGADLIAFETIP-NKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
.++++.++++|||+|.+.+-. +.......++.+++....|++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vi 149 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVI 149 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEE
Confidence 457888999999999886544 344555667777765567765
No 157
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=30.26 E-value=73 Score=26.94 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=27.0
Q ss_pred HHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHH
Q 027947 172 RRVLILANSGADLIAFETIPNKLEAKVFSKYVII 205 (216)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~ 205 (216)
++++..+++|+|.|++.+|+ ..+++.+++.++.
T Consensus 205 eea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~ 237 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFA-VWQTQTAVQRRDS 237 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhc
Confidence 45666677899999999975 6888888888876
No 158
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=29.99 E-value=82 Score=27.62 Aligned_cols=44 Identities=14% Similarity=0.121 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCCEEEEec-CCCHHHHHHHHHHHHHhC-Cccccc
Q 027947 170 HRRRVLILANSGADLIAFET-IPNKLEAKVFSKYVIINQ-RKMLLK 213 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~a~~~~~-~~~~~~ 213 (216)
..++++.+.++|+|+|.+-+ ..+...+...++++++.. ..||+.
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~ 146 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMA 146 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEE
Confidence 45678999999999998864 334445556777888753 567765
No 159
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=29.81 E-value=1.5e+02 Score=24.94 Aligned_cols=69 Identities=19% Similarity=0.174 Sum_probs=40.7
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE---------ecCCCHHHHHHHHHHH
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF---------ETIPNKLEAKVFSKYV 203 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~---------ET~p~~~Ea~a~~~a~ 203 (216)
+.+|-|=+--+.+.+.||..| .+.+.+. .+++.+++.|+|+|=+ +.++.-+|..-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a~----~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETAI----NRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHHH----HHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHHH----HHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 457888887788888776433 2344433 4577888999999965 4567777888877777
Q ss_pred HHhCCcccc
Q 027947 204 IINQRKMLL 212 (216)
Q Consensus 204 ~~~~~~~~~ 212 (216)
+...+..+.
T Consensus 75 ~~l~~~~v~ 83 (270)
T 4hb7_A 75 EAIVGFDVK 83 (270)
T ss_dssp HHHTTSSSE
T ss_pred HHhhcCCCe
Confidence 776544343
No 160
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=29.40 E-value=1.1e+02 Score=24.74 Aligned_cols=54 Identities=9% Similarity=-0.002 Sum_probs=33.5
Q ss_pred CCCHHHHHHHH---HHHHHHHHhCCCCEEEEe----cCC-CHHHHHHHHHHHHHhCCccccc
Q 027947 160 AVSLETLKEFH---RRRVLILANSGADLIAFE----TIP-NKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 160 ~~s~ee~~~~h---~~qi~~l~~~gvD~l~~E----T~p-~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
.++.+++.++- .+-++.|.++|+|+|++= ||- -..-.+.+.+.+++....|++.
T Consensus 42 ~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~ 103 (240)
T 3ixl_A 42 SVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTT 103 (240)
T ss_dssp CSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEEC
Confidence 36778877763 555777888999999986 221 1222234555665555566653
No 161
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=28.74 E-value=75 Score=28.51 Aligned_cols=43 Identities=19% Similarity=0.256 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHH----hCCccccc
Q 027947 170 HRRRVLILANSGADLIAFETIPNKLEAKVFSKYVII----NQRKMLLK 213 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~----~~~~~~~~ 213 (216)
--.|+..|.++|.|++=+ |+|+.++++++-+.-++ ....||+-
T Consensus 40 Tv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVA 86 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVG 86 (406)
T ss_dssp HHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEe
Confidence 456899999999999986 68999888776555443 25677753
No 162
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=28.61 E-value=2.3e+02 Score=23.88 Aligned_cols=68 Identities=21% Similarity=0.234 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHH
Q 027947 91 TEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFH 170 (216)
Q Consensus 91 ~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h 170 (216)
..+.+++++..++.+-+++.. .+-+.+|.|.+|+ |.+ +. +++++.+.+
T Consensus 189 ~~~~~~~l~~rir~vL~iA~~------------------~g~~~LVLGA~GC-Gvf-----------gn--pp~~VA~~~ 236 (277)
T 3sig_A 189 VEEIGRVLRGRAAKVLAAARH------------------HGHRRLVLGAWGC-GVF-----------GN--DPAQVAETF 236 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------------------TTCCEEEECCTTS-STT-----------CC--CHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH------------------cCCCEEEECCccc-CcC-----------CC--CHHHHHHHH
Confidence 345667777777777766654 3457899999985 553 32 678888888
Q ss_pred HHHHHH---HHhCCCCEEEEecCC
Q 027947 171 RRRVLI---LANSGADLIAFETIP 191 (216)
Q Consensus 171 ~~qi~~---l~~~gvD~l~~ET~p 191 (216)
++.+.. +. ...+-|+|=-+.
T Consensus 237 ~~vL~~~~~f~-~~f~~VvFAv~d 259 (277)
T 3sig_A 237 AGLLLDGGPFA-GRFAHVVFAVWD 259 (277)
T ss_dssp HHHHSTTCTTT-TTCSEEEEECCC
T ss_pred HHHHhhcchhc-CCceEEEEEEec
Confidence 766552 22 356777776554
No 163
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=28.21 E-value=1.2e+02 Score=25.51 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ |.. =+.+|-+.+++.+.+. ++.||+
T Consensus 33 ~iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 33 DIDIAAGRE----VAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp CBCHHHHHH----HHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367765554 488888899999875 332 2567888888877764 467775
No 164
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=27.74 E-value=1.1e+02 Score=25.52 Aligned_cols=48 Identities=27% Similarity=0.281 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
++.+.+++ .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3a5f_A 19 VDFDKLSE----LIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVI 74 (291)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 56655444 478888899999875 32 22567888888877764 467775
No 165
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.73 E-value=80 Score=26.04 Aligned_cols=35 Identities=11% Similarity=-0.019 Sum_probs=28.1
Q ss_pred HHhCCCCEEEEecCC--CHHHHHHHHHHHHHhCCcccc
Q 027947 177 LANSGADLIAFETIP--NKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 177 l~~~gvD~l~~ET~p--~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.++|+|+|.+---. +...+..+++.+|+ .+.|++
T Consensus 32 ~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~~~Pii 68 (235)
T 3w01_A 32 ICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-YPLPLV 68 (235)
T ss_dssp HHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-SCSCEE
T ss_pred HHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-cCCCEE
Confidence 578999999987433 57778889999998 778875
No 166
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=27.73 E-value=74 Score=25.26 Aligned_cols=48 Identities=21% Similarity=0.185 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
+.+++..+-.+.++.|.+.|+|+|++=+.... .+++.+++..+.|++.
T Consensus 54 ~~~~~~~~l~~~~~~L~~~g~d~iviaCnTa~----~~~~~l~~~~~iPvi~ 101 (226)
T 2zsk_A 54 GWEGRKKILINAAKALERAGAELIAFAANTPH----LVFDDVQREVNVPMVS 101 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEESSSGGG----GGHHHHHHHCSSCBCC
T ss_pred CcchHHHHHHHHHHHHHHcCCCEEEECCCcHH----HHHHHHHHhCCCCEec
Confidence 47888888899999999999999998654322 1134556656677663
No 167
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=27.51 E-value=67 Score=26.58 Aligned_cols=50 Identities=22% Similarity=0.178 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EEecCCCHHHHHHHHHHHHHh-CCccccccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKVFSKYVIIN-QRKMLLKKF 215 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l-----~~ET~p~~~Ea~a~~~a~~~~-~~~~~~~~~ 215 (216)
+.+++.+ +++.+...|+|++ +++.+++..++..++..+++. +++|++--|
T Consensus 30 t~~e~l~----~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 30 NKKDIIK----EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp SHHHHHH----HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5666654 3566777899988 778889999999999999885 478987543
No 168
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=27.49 E-value=1.1e+02 Score=23.90 Aligned_cols=40 Identities=13% Similarity=-0.037 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCccccc
Q 027947 169 FHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
...+.++.|.+.|+|+|++=.... ..++.+++....|++.
T Consensus 63 ~l~~~~~~l~~~g~d~iviaCnta-----~~~~~l~~~~~iPvi~ 102 (228)
T 2eq5_A 63 KIIRLAKEFEREGVDAIIISCAAD-----PAVEKVRKLLSIPVIG 102 (228)
T ss_dssp HHHHHHHHHHHTTCSEEEECSTTC-----TTHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEeCCch-----HHHHHHHHhCCCCEeC
Confidence 444557778889999999887555 5566777766777763
No 169
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=27.28 E-value=69 Score=26.29 Aligned_cols=39 Identities=15% Similarity=0.010 Sum_probs=29.8
Q ss_pred HHHHHhCCCCEEEEecCC--CHHHHHHHHHHHHHhCCccccc
Q 027947 174 VLILANSGADLIAFETIP--NKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p--~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
++.+.++|+|+|++---. +..++..+++.+|+ .+.|++.
T Consensus 24 ~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~-~~~Pvvl 64 (228)
T 3vzx_A 24 LEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-FLVPCVL 64 (228)
T ss_dssp HHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT-SSSCEEE
T ss_pred HHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc-cCCCEEE
Confidence 344678999999987432 56778889999998 7788764
No 170
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=27.24 E-value=3.2e+02 Score=24.03 Aligned_cols=75 Identities=19% Similarity=0.056 Sum_probs=50.7
Q ss_pred CCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-cCCCHHHHHHHHHHHHHhCCc
Q 027947 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~a~~~~~~~ 209 (216)
+.++.|.-.-|+....+ .-.|+. .+++.+.+--.+.++.+.+.|.|-|++- --+++.+...+-+.+.+..+-
T Consensus 133 ~~piRIGvN~GSL~~~l------l~~yg~-~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~ayr~la~~~dy 205 (366)
T 3noy_A 133 GVAVRIGVNSGSLEKDL------LEKYGY-PSAEALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAERTDV 205 (366)
T ss_dssp TCEEEEEEEGGGCCHHH------HHHHSS-CCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEecCCcCCCHHH------HHhcCC-CCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCChHHHHHHHHHHHhccCC
Confidence 46788864444432211 112331 4678888888888999999998666544 346788888888888887888
Q ss_pred ccc
Q 027947 210 MLL 212 (216)
Q Consensus 210 ~~~ 212 (216)
|+.
T Consensus 206 PLH 208 (366)
T 3noy_A 206 PLH 208 (366)
T ss_dssp CEE
T ss_pred CEE
Confidence 874
No 171
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=27.12 E-value=40 Score=25.44 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=11.0
Q ss_pred CCCeEEEEecCCc
Q 027947 131 SRPVLVAASVGSY 143 (216)
Q Consensus 131 ~~~~~VaGsiGP~ 143 (216)
+..++|+|.|||.
T Consensus 67 g~~vvi~~~iG~~ 79 (145)
T 1p90_A 67 DCQVLYVVSIGGP 79 (145)
T ss_dssp TCSEEEESBCCHH
T ss_pred CCCEEEECCCCHH
Confidence 4689999999985
No 172
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=27.01 E-value=2.9e+02 Score=23.38 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=71.3
Q ss_pred ChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (216)
+++...++-+..+++|.+.|-|.-+..+. .| ..++++-++++- .+. ....
T Consensus 62 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~-----~G----~sE~~lG~al~~------~~~---------------~~R~ 111 (353)
T 3erp_A 62 RVENSRALLQRAFDLGITHFDLANNYGPP-----PG----SAECNFGRILQE------DFL---------------PWRD 111 (353)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTCTTT-----TT----HHHHHHHHHHHH------HTG---------------GGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEChhhhCCC-----CC----hHHHHHHHHHHh------hcc---------------CCCC
Confidence 56778888888999999999988655441 12 234555555532 000 0123
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC---CCHHHHHHHHHHHHHhC
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~---p~~~Ea~a~~~a~~~~~ 207 (216)
+++|+-=+|+.-. + +++....+.+.+.......++.|--.-+|++++=-. ..+.|...+++-+++.+
T Consensus 112 ~v~I~TK~g~~~~---~-----~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~G 181 (353)
T 3erp_A 112 ELIISTKAGYTMW---D-----GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHG 181 (353)
T ss_dssp GCEEEEEESSCCS---S-----STTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEeeeccCCC---C-----CcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCC
Confidence 6788877765311 1 111112478888888888888887677899887543 23556655565555544
No 173
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=26.63 E-value=1.3e+02 Score=24.01 Aligned_cols=37 Identities=3% Similarity=-0.086 Sum_probs=26.4
Q ss_pred HHHhCCCCEEEEec---CCCHHHHHHHHHHHHHhCCcccc
Q 027947 176 ILANSGADLIAFET---IPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 176 ~l~~~gvD~l~~ET---~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
.+.+.|+|.+++-- .-...|+...+..+++.+..|++
T Consensus 77 ~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv 116 (219)
T 2h6r_A 77 AIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIV 116 (219)
T ss_dssp HHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 34445999999943 23357888888888888876654
No 174
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=26.54 E-value=55 Score=28.40 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHH
Q 027947 172 RRVLILANSGADLIAFETIPNKLEAKVFSKYVII 205 (216)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~ 205 (216)
.+++.++++|+|.|++--+.+..|++.++.+++.
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~ 141 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYY 141 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhcc
Confidence 4788888999999999999999999999999864
No 175
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.52 E-value=2.4e+02 Score=22.27 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCC--------CHHHHHHHHHHH
Q 027947 163 LETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKVFSKYV 203 (216)
Q Consensus 163 ~ee~~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~a~ 203 (216)
.+.+.+..++..+...+.||. |.+|+++ +..++..+++.+
T Consensus 128 ~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 128 VDRAIESVRRVIKVAEDYGII-YALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HHHHHHHHHTTHHHHHHHTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEeCccccccccCCHHHHHHHHHHc
Confidence 445555555556666667985 6679875 456655554433
No 176
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=26.41 E-value=58 Score=30.33 Aligned_cols=28 Identities=36% Similarity=0.268 Sum_probs=25.2
Q ss_pred CCCCEEEEecC-CCHHHHHHHHHHHHHhC
Q 027947 180 SGADLIAFETI-PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 180 ~gvD~l~~ET~-p~~~Ea~a~~~a~~~~~ 207 (216)
..+|+||.||= |++.+++...+.+++.-
T Consensus 387 p~aDliW~Et~~P~~~~a~~fa~~i~~~~ 415 (538)
T 1dqu_A 387 PFADLIWMESKLPDYKQAKEFADGVHAVW 415 (538)
T ss_dssp TSCSEEECCCSSCCHHHHHHHHHHHHHHC
T ss_pred cccceEEeccCCCCHHHHHHHHHHHHHhC
Confidence 57899999996 99999999999999853
No 177
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=26.11 E-value=1.2e+02 Score=24.27 Aligned_cols=34 Identities=18% Similarity=-0.023 Sum_probs=27.0
Q ss_pred HHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Q 027947 177 LANSGADLIAFETIPNKLEAKVFSKYVIINQRKM 210 (216)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~~ 210 (216)
+.+.|+|++.+=......-++++++++++.+.+|
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~ 111 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDK 111 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTT
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCc
Confidence 6788999988877777767889999998876433
No 178
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=25.99 E-value=2.6e+02 Score=22.56 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCC--------CHHHHHHHHHHH
Q 027947 164 ETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKVFSKYV 203 (216)
Q Consensus 164 ee~~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~a~ 203 (216)
+.+.+..++.++...+.||. |++|+++ +..++..+++.+
T Consensus 147 ~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 193 (309)
T 2hk0_A 147 ARGVEGINGIADFANDLGIN-LCIEVLNRFENHVLNTAAEGVAFVKDV 193 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEeecccccccccCCHHHHHHHHHHc
Confidence 34445555555556667885 6679984 566666655544
No 179
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=25.85 E-value=1.2e+02 Score=25.40 Aligned_cols=49 Identities=16% Similarity=0.240 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 29 ~iD~~~l~~l----v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 29 NIDFAKTTKL----VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp SBCHHHHHHH----HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 4677655554 78888899999875 32 22567888888877764 467775
No 180
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=25.73 E-value=3.3e+02 Score=23.59 Aligned_cols=43 Identities=12% Similarity=-0.026 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCCCCEEEEec--CCCHHH--HHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFET--IPNKLE--AKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET--~p~~~E--a~a~~~a~~~~~~~~~~ 212 (216)
+.+.++.|.+.|+|+|-+=. ...... -...+..+++.-+.||+
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi 303 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLI 303 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEE
Confidence 34458889999999997632 110000 01234455655566764
No 181
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=25.61 E-value=3.7e+02 Score=24.31 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCC
Q 027947 161 VSLETLKEFHRRRVLILANSGAD 183 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD 183 (216)
.+++++++|-+.....|.+.|+|
T Consensus 195 T~PeeA~~fv~~~~~~f~~~gld 217 (450)
T 3txv_A 195 TAPEAAIETVRVHRAAFEEAGAA 217 (450)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHHHHHHHHHhCcc
Confidence 57899999998888899988887
No 182
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=25.45 E-value=1.7e+02 Score=26.41 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCCCEEEEecC-CCHHHHHHHHHHHHHhC-Cccccc
Q 027947 170 HRRRVLILANSGADLIAFETI-PNKLEAKVFSKYVIINQ-RKMLLK 213 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~a~~~~~-~~~~~~ 213 (216)
+.++++.+.++|+|+|.+-+- ++.......++.+++.. ..|++-
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~ 275 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIG 275 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEE
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEE
Confidence 355788899999999998643 34455666777777754 567653
No 183
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=25.40 E-value=1.2e+02 Score=25.42 Aligned_cols=49 Identities=12% Similarity=0.177 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ |.. =+.+|-+.+++.+.+. ++.||+
T Consensus 20 ~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 76 (294)
T 3b4u_A 20 TVDIDAMIAH----ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIV 76 (294)
T ss_dssp SBCHHHHHHH----HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4777665554 78888899999875 322 2577888888888775 356765
No 184
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=25.39 E-value=82 Score=27.27 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=22.9
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
++..+++|+|.|.+.+|+ +.+++.+++.++
T Consensus 244 a~eAl~aGaD~I~LDn~~-~~~l~~av~~l~ 273 (320)
T 3paj_A 244 LEEAISAGADIIMLDNFS-LEMMREAVKINA 273 (320)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC
Confidence 333455799999999975 788888887765
No 185
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=25.33 E-value=1.2e+02 Score=25.47 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 28 ~iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 84 (303)
T 2wkj_A 28 ALDKASLRR----LVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLI 84 (303)
T ss_dssp SBCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367765554 478888899999875 32 12577888888877764 467775
No 186
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A*
Probab=25.28 E-value=91 Score=27.99 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=28.4
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
.|.+|+-...+++ |-+.|||++.|-- +..+++.|++.+.+
T Consensus 73 DLk~~eGr~~l~~--Li~~ADVlienfr---PGv~erlGL~ye~L 112 (428)
T 2vjq_A 73 DMKTPEGKELLEQ--MIKKADVMVENFG---PGALDRMGFTWEYI 112 (428)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEECCC---TTHHHHTTCCHHHH
T ss_pred CCCCHHHHHHHHH--HHHhCCEEEeCCC---cchHHHcCCCHHHH
Confidence 4677776555554 4567999999853 66788999987644
No 187
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=25.24 E-value=2.3e+02 Score=25.21 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhCCCC-EEEEecCC----------CHHHHHHHHHHH
Q 027947 165 TLKEFHRRRVLILANSGAD-LIAFETIP----------NKLEAKVFSKYV 203 (216)
Q Consensus 165 e~~~~h~~qi~~l~~~gvD-~l~~ET~p----------~~~Ea~a~~~a~ 203 (216)
.+.+..++.++...+.||+ .|++|.+| +..++..+++.+
T Consensus 207 ~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~li~~v 256 (438)
T 1a0c_A 207 NFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAFLRKY 256 (438)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHHHHHc
Confidence 3344444444444556776 78889874 445655555443
No 188
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=25.21 E-value=1.2e+02 Score=24.55 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCEEEEec-CC---------------------CHHHHHHHHHHHHHhCCcccc
Q 027947 170 HRRRVLILANSGADLIAFET-IP---------------------NKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p---------------------~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
..+.++.+.++|||.|-+-+ ++ ++.+....++.+++..+.|++
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~ 98 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVV 98 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEE
Confidence 44568889999999998864 11 456667778888877778864
No 189
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.12 E-value=1.1e+02 Score=25.50 Aligned_cols=49 Identities=20% Similarity=0.129 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 18 ~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (292)
T 2ojp_A 18 NVCRASLKKL----IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVI 74 (292)
T ss_dssp CBCHHHHHHH----HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3677665554 77788889999875 32 22577888888887764 467775
No 190
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=25.07 E-value=3.2e+02 Score=23.21 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=28.9
Q ss_pred cCCChHHH-----------HHHHHHHHHhcCCeeec-cccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 027947 50 LVSSPHLV-----------RKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109 (216)
Q Consensus 50 ll~~pe~V-----------~~iH~~Yl~AGadiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~ 109 (216)
+.++||.+ .+.-+.+++||||+|.- .+|.. -++++..+++..-..+-..+..
T Consensus 181 ~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~i~i~D~~~~--------~lsp~~f~ef~~p~~k~i~~~i 244 (367)
T 1r3s_A 181 LYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAG--------HLGPQLFNKFALPYIRDVAKQV 244 (367)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGG--------GSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccc--------cCCHHHHHHHhHHHHHHHHHHH
Confidence 35788753 33445566789998863 33431 2455556665555554444433
No 191
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=25.02 E-value=1.1e+02 Score=25.60 Aligned_cols=49 Identities=16% Similarity=0.086 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.+++ .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 17 ~iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 73 (292)
T 2vc6_A 17 RIDEVALHD----LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVI 73 (292)
T ss_dssp EECHHHHHH----HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367665554 478888899999874 32 22577888888887764 567775
No 192
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=24.98 E-value=3.2e+02 Score=23.27 Aligned_cols=44 Identities=18% Similarity=0.008 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCC--CCEEEEe-----cCCCHHHHHHHHHHHHHhCCcccc
Q 027947 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~E-----T~p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
+.+...++.|.+.| +|.|-+. ..|+..+++.+++.+...+ +||-
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lG-l~v~ 237 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLD-VQLH 237 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTS-CEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcC-CcEE
Confidence 44566788888877 6999766 3478899999999998877 5553
No 193
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=24.91 E-value=1.3e+02 Score=25.30 Aligned_cols=49 Identities=14% Similarity=0.170 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 29 ~iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVi 85 (306)
T 1o5k_A 29 ELDLESYER----LVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVI 85 (306)
T ss_dssp EECHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 367665554 488888899999875 32 23577888888887764 467775
No 194
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=24.88 E-value=63 Score=26.44 Aligned_cols=26 Identities=15% Similarity=0.092 Sum_probs=22.2
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccc
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnT 76 (216)
+|+ ++.+.+.-+-=+++|||.|.|.|
T Consensus 124 ~Lt-~eei~~a~~ia~eaGADfVKTST 149 (226)
T 1vcv_A 124 YLR-DEERYTLYDIIAEAGAHFIKSST 149 (226)
T ss_dssp GCC-HHHHHHHHHHHHHHTCSEEECCC
T ss_pred CCC-HHHHHHHHHHHHHcCCCEEEeCC
Confidence 344 67788888989999999999998
No 195
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=24.62 E-value=1.6e+02 Score=24.11 Aligned_cols=42 Identities=10% Similarity=0.002 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCCCEEEEecCCC----------------------HHHHHHHHHHHHHh-CCcccc
Q 027947 171 RRRVLILANSGADLIAFETIPN----------------------KLEAKVFSKYVIIN-QRKMLL 212 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~----------------------~~Ea~a~~~a~~~~-~~~~~~ 212 (216)
.+.++.|.++|+|+|-+-+-.+ +.....+++.+++. .+.|++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~ 98 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIG 98 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4558899999999999976221 23334567777777 577763
No 196
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=24.53 E-value=1.7e+02 Score=26.68 Aligned_cols=61 Identities=15% Similarity=0.242 Sum_probs=41.7
Q ss_pred EEecCCc-ccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHh
Q 027947 137 AASVGSY-GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIIN 206 (216)
Q Consensus 137 aGsiGP~-g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~ 206 (216)
.|.+++. |--+ ||...+- +.++.++..+ ++..++.|+|+|++=-+.+..+++.+.+++++.
T Consensus 149 gG~L~~~KgvNl-Pg~~~~l---p~ltekD~~D-----i~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~ 210 (470)
T 1e0t_A 149 NGDLGENKGVNL-PGVSIAL---PALAEKDKQD-----LIFGCEQGVDFVAASFIRKRSDVIEIREHLKAH 210 (470)
T ss_dssp CEEECSSCEEEC-SSCCCCC---CSSCHHHHHH-----HHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTT
T ss_pred CcEEeCCceeec-CCCcCCC---CCCCcCCHHH-----HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHh
Confidence 5666664 3222 3322222 2356554433 566777899999999999999999999999876
No 197
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=24.42 E-value=1.3e+02 Score=25.11 Aligned_cols=49 Identities=18% Similarity=0.244 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 17 ~iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 73 (294)
T 2ehh_A 17 EVDYEALGN----LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVI 73 (294)
T ss_dssp EECHHHHHH----HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CcCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 366655444 488888899998875 32 22567878888877764 467765
No 198
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=24.35 E-value=3.3e+02 Score=23.25 Aligned_cols=45 Identities=13% Similarity=-0.110 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCC--CCEEEEe-----cCCCHHHHHHHHHHHHHhCCccccc
Q 027947 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKVFSKYVIINQRKMLLK 213 (216)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~E-----T~p~~~Ea~a~~~a~~~~~~~~~~~ 213 (216)
+.+...++.|.+.| +|.|-+. ..|++.+++..++.+...+ +||.+
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G-lpi~i 252 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLG-LDNII 252 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT-CEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhCC-CeEEE
Confidence 44667788887776 5998774 3478899999999888766 56644
No 199
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=24.33 E-value=91 Score=26.70 Aligned_cols=29 Identities=7% Similarity=0.005 Sum_probs=22.5
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHH
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYV 203 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~ 203 (216)
++..+++|+|.|.+.+|+ +.+++.+++.+
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i 250 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVT 250 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHh
Confidence 444556899999999987 67888777766
No 200
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=24.12 E-value=1e+02 Score=25.84 Aligned_cols=38 Identities=16% Similarity=0.199 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCEEEEe--cCCCHHHHHHHHHHHHHhC
Q 027947 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~a~~~~~ 207 (216)
.|.+++...+++|.++++ | --.++.|++.+++++++.+
T Consensus 106 ~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g 145 (393)
T 4fb5_A 106 FHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSG 145 (393)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcC
Confidence 488899999999988665 8 3468999999999999876
No 201
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=24.01 E-value=3.7e+02 Score=23.67 Aligned_cols=104 Identities=10% Similarity=0.124 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHH-------hcCCeeeccc---ccc----CH---HHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHhhc
Q 027947 55 HLVRKVHLDYLD-------AGANIIITAS---YQA----TI---QGFEAKGFST-EEAEALLRRSVEIACEAREIYYDRC 116 (216)
Q Consensus 55 e~V~~iH~~Yl~-------AGadiI~TnT---y~a----~~---~~l~~~g~~~-~~~~~l~~~av~lA~~A~~~~~~~~ 116 (216)
+.|.++-.+|.+ ||.|.|.-+- |=. ++ .+-.++|-+. +.=.++...-++-.|+++.++
T Consensus 163 ~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~---- 238 (419)
T 3l5a_A 163 EKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKE---- 238 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhh----
Confidence 567788888876 5888776432 211 11 1122344443 322345555555555554321
Q ss_pred cCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CCCCEEEEe
Q 027947 117 MKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILAN-SGADLIAFE 188 (216)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~-~gvD~l~~E 188 (216)
.+.+..|.-=|.|.... . +.. ..+.++. ...++.|.+ +|+|+|-+=
T Consensus 239 -------------~~~~f~v~vRis~~~~~-~------~~~--G~~~ed~----~~la~~L~~~~Gvd~I~vs 285 (419)
T 3l5a_A 239 -------------APDNFILGFRATPEETR-G------SDL--GYTIDEF----NQLIDWVMDVSNIQYLAIA 285 (419)
T ss_dssp -------------CCTTCEEEEEECSCEEE-T------TEE--EECHHHH----HHHHHHHHHHSCCCCEEEC
T ss_pred -------------cCCCeeEEEeccccccc-C------CCC--CCCHHHH----HHHHHHHHhhcCCcEEEEe
Confidence 12334455556664321 1 000 1355554 445888999 999999653
No 202
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=23.88 E-value=1.3e+02 Score=25.05 Aligned_cols=40 Identities=5% Similarity=-0.035 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCEEEEe--cCCCHHHHHHHHHHHHHhCCc
Q 027947 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~a~~~~~~~ 209 (216)
.|.+.+..++++|.+++ .| --.++.|++.+++++++.+.+
T Consensus 79 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 79 LNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 58889999999999855 57 345789999999999998743
No 203
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=23.72 E-value=2.4e+02 Score=26.22 Aligned_cols=66 Identities=20% Similarity=0.193 Sum_probs=43.9
Q ss_pred eEEEEecCCc-ccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCC
Q 027947 134 VLVAASVGSY-GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQR 208 (216)
Q Consensus 134 ~~VaGsiGP~-g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~ 208 (216)
+...|.+++. |--+ ||....- +.++.++..+ ++..++.|||+|++=-+.+..+++.+.+++++.+.
T Consensus 216 V~~gG~L~s~KgvNl-Pg~~l~l---palTekD~~d-----l~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~ 282 (550)
T 3gr4_A 216 VENGGSLGSKKGVNL-PGAAVDL---PAVSEKDIQD-----LKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGK 282 (550)
T ss_dssp EEECEEECSSCBEEC-TTSCCCC---CSSCHHHHHH-----HHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTT
T ss_pred EEeCcEEcCCceeec-CCCccCC---CCCCHHHHHH-----HHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3445666663 3333 3322221 2366665554 45667789999999999999999999999987654
No 204
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=23.58 E-value=3.1e+02 Score=22.65 Aligned_cols=113 Identities=16% Similarity=0.060 Sum_probs=69.3
Q ss_pred ChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (216)
+++...++-+..+++|.+.|-|.-...+ | ..++++-++++- +. ....
T Consensus 31 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~-------G----~sE~~lG~al~~-------~~---------------~~R~ 77 (327)
T 3eau_A 31 TDEMAEHLMTLAYDNGINLFDTAEVYAA-------G----KAEVVLGNIIKK-------KG---------------WRRS 77 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEETTGGG-------G----HHHHHHHHHHHH-------HT---------------CCGG
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCC-------C----ChHHHHHHHHHh-------cC---------------CccC
Confidence 4567778888889999999988765433 1 234455555432 10 0123
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC---CCHHHHHHHHHHHHHhC
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~---p~~~Ea~a~~~a~~~~~ 207 (216)
+++|+-=+++.+... . ....+.+.++...+.-++.|--.-+|++++--. ..+.|...+++.+++.+
T Consensus 78 ~v~I~TK~~~~~~~~-------~--~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~G 146 (327)
T 3eau_A 78 SLVITTKIFWGGKAE-------T--ERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG 146 (327)
T ss_dssp GCEEEEEESBCCSSG-------G--GBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEEeecCCCCCC-------C--CCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 677776665432210 0 012578888888888888887677899987532 23556666666666554
No 205
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=23.52 E-value=3.3e+02 Score=22.87 Aligned_cols=47 Identities=17% Similarity=0.322 Sum_probs=26.4
Q ss_pred CCChHHHHH-----------HHHHHHHhcCCeeecc-ccccCHHHHHhcCCCHHHHHHHHHHHHH
Q 027947 51 VSSPHLVRK-----------VHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVE 103 (216)
Q Consensus 51 l~~pe~V~~-----------iH~~Yl~AGadiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~ 103 (216)
.++||.+.+ .-+.+++||||+|.-. +|... .-++++..+++.....+
T Consensus 175 ~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D~~a~~------~~lsp~~f~~f~~p~~k 233 (348)
T 4ay7_A 175 IKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADPVASP------DLMSPDSFRQFLKSRLQ 233 (348)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECGGGST------TTSCHHHHHHHHHHHHH
T ss_pred HHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeecccccc------ccCCHHHHHHHhhHHHH
Confidence 567765433 3445567899988644 44321 12466666666554443
No 206
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=23.35 E-value=1e+02 Score=28.87 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCCCHHHHHHHHHHHHHhC
Q 027947 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 161 ~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~ 207 (216)
++.++.. -++..++.|||+|++=-+.+.++++.+.+++++.+
T Consensus 171 ltekD~~-----di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~ 212 (587)
T 2e28_A 171 ITEKDRA-----DILFGIRQGIDFIAASFVRRASDVLEIRELLEAHD 212 (587)
T ss_dssp CCHHHHH-----HHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CCcccHH-----HHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 5655543 35667788999999999999999999999998876
No 207
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=23.22 E-value=1.3e+02 Score=26.23 Aligned_cols=49 Identities=16% Similarity=0.083 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecCC-CHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ETIP-NKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET~p-~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ |... +.+|-+.+++.+.+. ++.||+
T Consensus 76 ~ID~~al~~----lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 132 (360)
T 4dpp_A 76 RFDLEAYDD----LVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVI 132 (360)
T ss_dssp SBCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 367665554 477888899998877 3222 577877888777664 466775
No 208
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=23.16 E-value=1.4e+02 Score=24.76 Aligned_cols=49 Identities=22% Similarity=0.210 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ec----C-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-ET----I-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-ET----~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.+++ .++.+++.|||.|++ -| . =+.+|-+.+++.+.+. ++.||+
T Consensus 17 ~iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 73 (289)
T 2yxg_A 17 EVDFDGLEE----NINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVI 73 (289)
T ss_dssp EECHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CcCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367665544 477888899998865 22 2 2567888888877764 466765
No 209
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=23.12 E-value=1.4e+02 Score=24.94 Aligned_cols=38 Identities=8% Similarity=0.024 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCEEEEec--CCCHHHHHHHHHHHHHhC
Q 027947 169 FHRRRVLILANSGADLIAFET--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~a~~~~~ 207 (216)
.|.+.+..++++|..++ .|- -.++.|++.+++++++.+
T Consensus 93 ~H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g 132 (330)
T 4ew6_A 93 YRYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQG 132 (330)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhcC
Confidence 58889999999998777 585 458999999999999876
No 210
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=22.93 E-value=1.2e+02 Score=24.84 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=27.9
Q ss_pred HHHHHhCCCCEEEEec-C-CCHHHHHHHHHHHHHhCCcccc
Q 027947 174 VLILANSGADLIAFET-I-PNKLEAKVFSKYVIINQRKMLL 212 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET-~-p~~~Ea~a~~~a~~~~~~~~~~ 212 (216)
++.+.++|+|+|.+-- - -++..+..+++.+|+ .+.|++
T Consensus 26 ~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~~~Piv 65 (234)
T 2f6u_A 26 IKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-YGLPIV 65 (234)
T ss_dssp HHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-SCCCEE
T ss_pred HHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-CCCCEE
Confidence 6788999999998873 1 235667777777777 567765
No 211
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=22.74 E-value=1.4e+02 Score=26.48 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCC-------CHHHHHHHHHHHHHhCCcccccc
Q 027947 162 SLETLKEFHRRRVLILANSGADLIAFETIP-------NKLEAKVFSKYVIINQRKMLLKK 214 (216)
Q Consensus 162 s~ee~~~~h~~qi~~l~~~gvD~l~~ET~p-------~~~Ea~a~~~a~~~~~~~~~~~~ 214 (216)
+..++++|+...++.|.+.|||+|=+--+. ...+.++..++++++++ |++.+
T Consensus 158 ~~p~~~~~~~~~~~~l~~~GvDyvK~D~~~~~~~~~~~~~~~~~~~~aL~~~gr-~i~~s 216 (433)
T 3cc1_A 158 TKEGAQSYYNSLFELYAQWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGR-PMVLS 216 (433)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCCEEEEESCSCTTSSCCCHHHHHHHHHHHHHSSS-CCEEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEeCCcccccCCcccHHHHHHHHHHHHhcCC-CEEEE
Confidence 445688899889999999999998544322 35778888999988774 55433
No 212
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=22.70 E-value=3.5e+02 Score=22.91 Aligned_cols=113 Identities=16% Similarity=0.043 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 027947 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (216)
Q Consensus 53 ~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (216)
+++...++-+..+++|.+.|-|.-+..+- ..++++-++++- +. ....
T Consensus 65 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G-----------~sE~~lG~al~~-------~~---------------~~R~ 111 (367)
T 3lut_A 65 TDEMAEHLMTLAYDNGINLFDTAEVYAAG-----------KAEVVLGNIIKK-------KG---------------WRRS 111 (367)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEETTGGGG-----------HHHHHHHHHHHH-------HT---------------CCGG
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCCC-----------chHHHHHHHHHh-------CC---------------CCCc
Confidence 45677788888899999999887654331 234455555432 10 0123
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC---CCHHHHHHHHHHHHHhC
Q 027947 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~~l~~~gvD~l~~ET~---p~~~Ea~a~~~a~~~~~ 207 (216)
+++|+-=+++.... + .....+.+.++...+.-++.|--.-+|++++=-. ..+.|...+++-+++.+
T Consensus 112 ~v~I~TK~~~~~~~-----~----~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~G 180 (367)
T 3lut_A 112 SLVITTKIFWGGKA-----E----TERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG 180 (367)
T ss_dssp GCEEEEEESBCCSS-----G----GGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEeccccCCCC-----c----cCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcC
Confidence 67777767643211 0 0012578888888888888887677899887542 23566666666666554
No 213
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.55 E-value=1.4e+02 Score=25.00 Aligned_cols=49 Identities=20% Similarity=0.083 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.+++ .++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 17 ~iD~~~l~~----lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 73 (297)
T 2rfg_A 17 QVDEKALAG----LVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVI 73 (297)
T ss_dssp EECHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 367665544 478888899999875 32 22577888888877764 467775
No 214
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=22.19 E-value=1.3e+02 Score=25.82 Aligned_cols=49 Identities=20% Similarity=0.231 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ |.. =+.+|-+.+++.+.+. ++.||+
T Consensus 48 ~ID~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 104 (343)
T 2v9d_A 48 QLDKPGTAAL----IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVL 104 (343)
T ss_dssp SBCHHHHHHH----HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4777665554 78888899999875 322 2577888888877764 467775
No 215
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=22.18 E-value=3.5e+02 Score=22.74 Aligned_cols=56 Identities=16% Similarity=0.099 Sum_probs=36.7
Q ss_pred CCCHHHHH---HHHHHHHHHHHhCCCCEEEEecC----------CC---------------HHHHHHHHHHHHHhCCccc
Q 027947 160 AVSLETLK---EFHRRRVLILANSGADLIAFETI----------PN---------------KLEAKVFSKYVIINQRKML 211 (216)
Q Consensus 160 ~~s~ee~~---~~h~~qi~~l~~~gvD~l~~ET~----------p~---------------~~Ea~a~~~a~~~~~~~~~ 211 (216)
.++.+|+. +.|.+.++.+.++|.|.|=+--- |. ..-+..+++++++..+.||
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcE
Confidence 46766665 45666777778899999954421 21 2235667777777667888
Q ss_pred cccc
Q 027947 212 LKKF 215 (216)
Q Consensus 212 ~~~~ 215 (216)
..|+
T Consensus 213 ~vri 216 (338)
T 1z41_A 213 FVRV 216 (338)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 216
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=22.08 E-value=1.4e+02 Score=24.78 Aligned_cols=49 Identities=20% Similarity=0.188 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCC-----CHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ -|.. +.+|-+.+++.+.+. ++.||+
T Consensus 18 ~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3tak_A 18 GVDWKSLEKL----VEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPII 74 (291)
T ss_dssp CBCHHHHHHH----HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHHH----HHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 3677655544 77888899997764 4443 678888888888774 466765
No 217
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=22.02 E-value=71 Score=25.97 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=25.5
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeecccccc
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a 79 (216)
+.+.|+.+.+.-+.|.++|||+|+-..+..
T Consensus 74 l~Dip~t~~~~i~~~~~~Gad~vTvH~~~g 103 (245)
T 1eix_A 74 FHDIPNTAAHAVAAAADLGVWMVNVHASGG 103 (245)
T ss_dssp ECSCHHHHHHHHHHHHHHTCSEEEEBGGGC
T ss_pred ccccHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 358899999888899999999999887754
No 218
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=21.98 E-value=37 Score=30.64 Aligned_cols=40 Identities=15% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCC-CCC
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GAD-LND 42 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~-~~~ 42 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++ ...
T Consensus 211 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~TFl~A~G~~~iG~ 254 (416)
T 2wzb_A 211 LGGAKVADKIQLINNMLDK-VNEMIIGGGMAFTFLKVLNNMEIGT 254 (416)
T ss_dssp ECSSCHHHHGGGHHHHTTT-CSEEEECGGGHHHHHHHHHCCCCTT
T ss_pred EcCcchhhHHHHHHHHHHh-cCeeeeChHHHHHHHHHcCCCcccc
Confidence 56899988 668888886 57889999998776665 887 653
No 219
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=21.83 E-value=1.4e+02 Score=25.17 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCC-----CHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ -|-. +.+|-+.+++.+.+. ++.||+
T Consensus 25 ~iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 81 (309)
T 3fkr_A 25 DLDLASQKR----AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVI 81 (309)
T ss_dssp SBCHHHHHH----HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 367765554 477888899998766 2221 577888888887774 567776
No 220
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=21.64 E-value=1.3e+02 Score=25.46 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCCEEEEec--CCCHHHHHHHHHHHHHhC
Q 027947 170 HRRRVLILANSGADLIAFET--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~a~~~~~ 207 (216)
|.+.+..++++|..++. |- -.++.|++.+++++++.+
T Consensus 80 H~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g 118 (364)
T 3e82_A 80 HAPLARLALNAGKHVVV-DKPFTLDMQEARELIALAEEKQ 118 (364)
T ss_dssp HHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCcEEE-eCCCcCCHHHHHHHHHHHHHhC
Confidence 77888888899988665 86 678999999999999876
No 221
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=21.64 E-value=3.7e+02 Score=22.78 Aligned_cols=94 Identities=16% Similarity=0.120 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecC--------CcccCcCCCCCCCCCCCC
Q 027947 88 GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG--------SYGAYLADGSEYSGDYGD 159 (216)
Q Consensus 88 g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiG--------P~g~~l~~gseY~g~y~~ 159 (216)
-++.++++++++.-++.|+.|.+. .=+-+-|=++.| |.-.... ++|-|
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~a------------------GfDgVEih~a~GyLl~qFlsp~~N~R~--D~yGG---- 196 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRA------------------GFQVIELHMAHGYLLSSFLSPLSNQRT--DAYGG---- 196 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHT------------------TCCEEEEEECTTSHHHHHHCTTTCCCC--STTSS----
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHc------------------CCCEEEECCccchHHHHhcCCcccccC--CCCCc----
Confidence 367788999999999999888753 112355556555 5332222 23333
Q ss_pred CCCHHHHHHHHHHHHHHHHhC-CCCE-EEEecC--------CCHHHHHHHHHHHHHhC
Q 027947 160 AVSLETLKEFHRRRVLILANS-GADL-IAFETI--------PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~-gvD~-l~~ET~--------p~~~Ea~a~~~a~~~~~ 207 (216)
+.+.-..+-.+.+++..++ |.|+ |.+=.= .+..|...+++.+.+.+
T Consensus 197 --slenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~G 252 (349)
T 3hgj_A 197 --SLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELG 252 (349)
T ss_dssp --SHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcC
Confidence 6777778888888888664 6676 433211 25788888888888764
No 222
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=21.50 E-value=1.7e+02 Score=24.40 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEE-----ecC-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILAN-SGADLIAF-----ETI-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~-~gvD~l~~-----ET~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++ .|||.|++ |.. =+.+|-+.+++.+.+. ++.||+
T Consensus 20 ~iD~~~l~~l----v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 77 (293)
T 1f6k_A 20 TINEKGLRQI----IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 77 (293)
T ss_dssp CBCHHHHHHH----HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CcCHHHHHHH----HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 3677665554 888888 99999875 322 2567888888877764 467775
No 223
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=21.50 E-value=60 Score=26.62 Aligned_cols=31 Identities=16% Similarity=0.034 Sum_probs=28.2
Q ss_pred HHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 174 VLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
++.++++|+|.|++--+.+..|++.++++++
T Consensus 84 i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~ 114 (256)
T 1dxe_A 84 IKRLLDIGFYNFLIPFVETKEEAELAVASTR 114 (256)
T ss_dssp HHHHHHTTCCEEEESCCCSHHHHHHHHHTTS
T ss_pred HHHHHhcCCceeeecCcCCHHHHHHHHHHhc
Confidence 7788889999999999999999999988875
No 224
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=21.39 E-value=98 Score=27.56 Aligned_cols=40 Identities=25% Similarity=0.416 Sum_probs=31.6
Q ss_pred CCCCCCCh--hHHHHHHhccCCeEEEecchHHHHHHC-CCCCCC
Q 027947 2 VSGSNGTT--SFMTDFLQKCGGYSVVDGGFATELERH-GADLND 42 (216)
Q Consensus 2 ~~~~~~~~--~~l~~~l~~~~~~lllDGg~gT~L~~~-g~~~~~ 42 (216)
+-|+++|+ .-|..++++ -+-+|+-|||+-.+.+. |++...
T Consensus 189 lGGaKVsdKi~vi~nLl~k-vD~liiGGgma~tFl~A~G~~iG~ 231 (387)
T 1zmr_A 189 VGGSKVSTKLTVLDSLSKI-ADQLIVGGGIANTFIAAQGHDVGK 231 (387)
T ss_dssp EEESCTTTTHHHHHHHHTT-CSEEEEEEHHHHHHHHHTTCCCTT
T ss_pred EcCcchhhHHHHHHHHHHh-cCEEEeCcHHHHHHHHHcCCCCCc
Confidence 56899998 668888886 57889999998766654 888755
No 225
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=21.27 E-value=1.4e+02 Score=25.60 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CCCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ |. .=+.+|-+.+++.+.+. ++.||+
T Consensus 51 ~iD~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 107 (332)
T 2r8w_A 51 RVDIEAFSAL----IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLM 107 (332)
T ss_dssp CBCHHHHHHH----HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4777665554 77788899999875 32 12577888888877764 467775
No 226
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=21.26 E-value=1.7e+02 Score=25.30 Aligned_cols=27 Identities=11% Similarity=0.176 Sum_probs=20.7
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccc
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnT 76 (216)
.+++++...+.-+.+.++|..-|...|
T Consensus 81 ~l~~~~~~~~~l~~~~~aGv~tiV~~t 107 (364)
T 3k2g_A 81 ALDDLDLAIAEVKQFAAVGGRSIVDPT 107 (364)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccHHHHHHHHHHHHhcCCCeEEEeC
Confidence 477888777888999999988555444
No 227
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.26 E-value=56 Score=27.06 Aligned_cols=42 Identities=21% Similarity=0.124 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCCEEEE-----ecCCCHHHHHHHHHHHHHhC-Ccccc
Q 027947 171 RRRVLILANSGADLIAF-----ETIPNKLEAKVFSKYVIINQ-RKMLL 212 (216)
Q Consensus 171 ~~qi~~l~~~gvD~l~~-----ET~p~~~Ea~a~~~a~~~~~-~~~~~ 212 (216)
.+.++.+.++|+|.+-+ -.+|++.....+++.+|+.. ++|+-
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ld 90 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMD 90 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEE
Confidence 34578888899998877 45688888888999999887 66653
No 228
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=21.24 E-value=1.5e+02 Score=24.70 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCEEEEec--CCCHHHHHHHHHHHHHhC
Q 027947 169 FHRRRVLILANSGADLIAFET--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~a~~~~~ 207 (216)
.|.+++...+++|.+++ .|- ..++.|++.+++++++.+
T Consensus 84 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g 123 (312)
T 3o9z_A 84 LHYPQIRMALRLGANAL-SEKPLVLWPEEIARLKELEARTG 123 (312)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSSCSCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHCCCeEE-EECCCCCCHHHHHHHHHHHHHcC
Confidence 38888999999998866 583 468999999999999876
No 229
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=21.23 E-value=1.6e+02 Score=24.25 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCEEEEec--CCCHHHHHHHHHHHHHhC
Q 027947 169 FHRRRVLILANSGADLIAFET--IPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~a~~~~~ 207 (216)
.|.+++..++++|..++. |- -.++.|++.+++++++.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g 116 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKG 116 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhC
Confidence 588999999999987665 84 347999999999999876
No 230
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=21.17 E-value=1.7e+02 Score=24.82 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCC-----CHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++.. ++.+++.|||.|++ -|.. +.+|-+.+++.+.+. ++.||+
T Consensus 39 ~iD~~~l~~l----i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi 95 (315)
T 3si9_A 39 AIDEKAFCNF----VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVV 95 (315)
T ss_dssp CBCHHHHHHH----HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBE
T ss_pred CcCHHHHHHH----HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4777665554 78888899999873 2221 577888888887774 567775
No 231
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=21.13 E-value=1.8e+02 Score=23.68 Aligned_cols=43 Identities=7% Similarity=0.057 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEecC-------CCHHHHHHHHHHHHHhC
Q 027947 165 TLKEFHRRRVLILANSGADLIAFETI-------PNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 165 e~~~~h~~qi~~l~~~gvD~l~~ET~-------p~~~Ea~a~~~a~~~~~ 207 (216)
.+.+..++.++...+.||..|++|++ .+..|+..+++.+.++.
T Consensus 155 ~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~~~ 204 (316)
T 3qxb_A 155 IARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSAADAARLMADLDGRT 204 (316)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCHHHHHHHHHHHhccC
Confidence 34445555555556679986788993 35777777777764433
No 232
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=21.12 E-value=1.1e+02 Score=27.19 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=28.0
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeeccccccCHHHHHhcCCCHHHH
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a~~~~l~~~g~~~~~~ 94 (216)
.|.+|+-...+++ |-+.|||+++|-- +..+++.|++.+.+
T Consensus 75 DLk~~~Gr~~l~~--Lv~~ADV~venfr---PG~~~rlGL~ye~L 114 (408)
T 1xk7_A 75 NIFKDEGREAFLK--LMETTDIFIEASK---GPAFARRGITDEVL 114 (408)
T ss_dssp CTTSHHHHHHHHH--HHTTCSEEEEECS---SSHHHHTTCCHHHH
T ss_pred cCCCHHHHHHHHH--HHhhCCEEEECCC---ccHHHHcCCCHHHH
Confidence 3667776555544 4577999998853 56678899987644
No 233
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=21.11 E-value=72 Score=26.36 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=28.4
Q ss_pred HHHHHHhCCCCEEEEecCCCHHHHHHHHHHHH
Q 027947 173 RVLILANSGADLIAFETIPNKLEAKVFSKYVI 204 (216)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~ 204 (216)
.++.+++.|+|.|++--+.+..|++.++++++
T Consensus 80 di~~~ld~G~~gI~lP~v~saed~~~~~~~~~ 111 (261)
T 3qz6_A 80 HVQRLLDIGAEGFMIPGVQSAETMRETVRLAK 111 (261)
T ss_dssp HHHHHHHHTCCEEEETTCCSHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCEEEECCcCCHHHHHHHHHHhc
Confidence 46677788999999999999999999999884
No 234
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=21.08 E-value=1.5e+02 Score=24.97 Aligned_cols=49 Identities=14% Similarity=0.064 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEe-c----C-CCHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAFE-T----I-PNKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~E-T----~-p~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++ ..++.+++.|||.|++= | . =+.+|-+.+++.+.+. ++.||+
T Consensus 31 ~iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 87 (307)
T 3s5o_A 31 EVDYGKLE----ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLL 87 (307)
T ss_dssp CBCHHHHH----HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEE
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEE
Confidence 36776544 44888899999988642 2 1 2577888888888875 466765
No 235
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=20.98 E-value=58 Score=26.34 Aligned_cols=30 Identities=17% Similarity=0.198 Sum_probs=25.0
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeecccccc
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a 79 (216)
+.+.|+.+...-+.|.++|||+|+-..|..
T Consensus 63 l~Dip~t~~~~~~~~~~~Gad~vtvH~~~g 92 (239)
T 1dbt_A 63 LHDIPTTVNKAMKRLASLGVDLVNVHAAGG 92 (239)
T ss_dssp ECSCHHHHHHHHHHHHTTTCSEEEEEGGGC
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEeCcCC
Confidence 358899998888889999999998877754
No 236
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=20.95 E-value=86 Score=19.46 Aligned_cols=20 Identities=25% Similarity=0.542 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHh-------cCCeeecc
Q 027947 56 LVRKVHLDYLDA-------GANIIITA 75 (216)
Q Consensus 56 ~V~~iH~~Yl~A-------GadiI~Tn 75 (216)
.++++|++.... .||+|+||
T Consensus 22 ~~R~~~~e~a~~~m~~~Vp~AdvVitN 48 (48)
T 3c01_A 22 KRREVHMEILSEQVKSDIENSRLIVAN 48 (48)
T ss_pred HHHHHHHHHHHhHHHhcCCCCCEeecC
Confidence 588888888763 48899987
No 237
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=20.85 E-value=1.3e+02 Score=26.15 Aligned_cols=43 Identities=9% Similarity=-0.115 Sum_probs=31.6
Q ss_pred HHHHHH---hCCCCEEEEec-C----------CCHHHHHHHHHHHHHhCCccccccc
Q 027947 173 RVLILA---NSGADLIAFET-I----------PNKLEAKVFSKYVIINQRKMLLKKF 215 (216)
Q Consensus 173 qi~~l~---~~gvD~l~~ET-~----------p~~~Ea~a~~~a~~~~~~~~~~~~~ 215 (216)
.++.+. +.|+|.|-+-- . .+.+.+..+++++++..++||+-|.
T Consensus 144 ~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi 200 (354)
T 4ef8_A 144 MCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKM 200 (354)
T ss_dssp HHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEe
Confidence 344444 57899987653 1 2567788899999999899998874
No 238
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=20.81 E-value=1.6e+02 Score=24.13 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCEEEEe--cCCCHHHHHHHHHHHHHhC
Q 027947 170 HRRRVLILANSGADLIAFE--TIPNKLEAKVFSKYVIINQ 207 (216)
Q Consensus 170 h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~a~~~~~ 207 (216)
|.+.+..++++|.. ++.| .-.++.|++.+++++++.+
T Consensus 79 h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 79 HYEIIKILLNLGVH-VYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp HHHHHHHHHHTTCE-EEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCc-EEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 77778888889988 4568 4568999999999999876
No 239
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=20.75 E-value=46 Score=26.64 Aligned_cols=24 Identities=25% Similarity=0.191 Sum_probs=18.5
Q ss_pred ccCCChHHHHHHHHHHHHhcCCeeecccc
Q 027947 49 CLVSSPHLVRKVHLDYLDAGANIIITASY 77 (216)
Q Consensus 49 ~ll~~pe~V~~iH~~Yl~AGadiI~TnTy 77 (216)
=++.++|.|++ ++|||+.|+|.|-
T Consensus 156 GlI~t~edv~~-----l~aGA~aIsTs~~ 179 (188)
T 1vkf_A 156 GLVETEEEARE-----ILKHVSAISTSSR 179 (188)
T ss_dssp SCCCSHHHHHH-----HTTTSSEEEECCH
T ss_pred CCcCCHHHHHH-----HHCCCeEEEeCCH
Confidence 34778877654 7999999998874
No 240
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=20.73 E-value=1.8e+02 Score=26.46 Aligned_cols=67 Identities=7% Similarity=0.056 Sum_probs=45.1
Q ss_pred eEEEEecCCc-ccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHHhCCCCEEEEecCCCHHHHHHHHHHHHHhCCc
Q 027947 134 VLVAASVGSY-GAYLADGSEYSGDYGDAVSLETLKEFHRRRVL--ILANSGADLIAFETIPNKLEAKVFSKYVIINQRK 209 (216)
Q Consensus 134 ~~VaGsiGP~-g~~l~~gseY~g~y~~~~s~ee~~~~h~~qi~--~l~~~gvD~l~~ET~p~~~Ea~a~~~a~~~~~~~ 209 (216)
+...|.+++. |--+ ||....- +.++.++..+ ++ ..++.|||+|.+=-+.+..+++.+.+.+++.+..
T Consensus 155 V~~gG~L~~~KgvNl-Pg~~~~l---p~lTekD~~d-----l~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~ 224 (461)
T 3qtg_A 155 AESSGVITGGKAIVV-EGKDYDI---STPAEEDVEA-----LKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQ 224 (461)
T ss_dssp ESSCEEECTTCBEEE-TTCCCCC---CSSCHHHHHH-----HHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCC
T ss_pred EEECCEecCCCceec-CCCCCCC---CCCCHHHHHH-----HHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 3345666663 3333 3322221 2467666555 44 5677899999999999999999999999987644
No 241
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=20.43 E-value=81 Score=26.28 Aligned_cols=46 Identities=13% Similarity=0.045 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCC---EEEEec-C----------CCHHHHHHHHHHHHHhCCccccccc
Q 027947 170 HRRRVLILANSGAD---LIAFET-I----------PNKLEAKVFSKYVIINQRKMLLKKF 215 (216)
Q Consensus 170 h~~qi~~l~~~gvD---~l~~ET-~----------p~~~Ea~a~~~a~~~~~~~~~~~~~ 215 (216)
|.+.++.+.++|+| .|-+-- . .+.+.+..+++++++..+.||+.|.
T Consensus 108 ~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~ 167 (314)
T 2e6f_A 108 NVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM 167 (314)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 55667778888899 665521 1 1556677888888887778988764
No 242
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=20.43 E-value=1.4e+02 Score=24.66 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=22.3
Q ss_pred CCHHHHHHH---HHHHHHHHHhCCCCEEEEecCC
Q 027947 161 VSLETLKEF---HRRRVLILANSGADLIAFETIP 191 (216)
Q Consensus 161 ~s~ee~~~~---h~~qi~~l~~~gvD~l~~ET~p 191 (216)
++++++... ..+.++.|.++|+|+|++-+..
T Consensus 67 v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnt 100 (273)
T 2xed_A 67 VSPEGLAAMNAQRERCVLEIADAAPEVILYACLV 100 (273)
T ss_dssp CSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCCh
Confidence 567766655 3456677888999999987644
No 243
>1wx1_A Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; structural genomics; 1.97A {Thermus thermophilus HB8} PDB: 1j33_A
Probab=20.32 E-value=1.6e+02 Score=25.48 Aligned_cols=37 Identities=30% Similarity=0.270 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEecCCcc
Q 027947 89 FSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYG 144 (216)
Q Consensus 89 ~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g 144 (216)
++.+++.+.++.+.++++++.+ .+.++++.|-+|+-+
T Consensus 131 Mt~~e~~~al~~G~~~a~~~~~-------------------~g~~ll~~GEmGiGn 167 (335)
T 1wx1_A 131 MTPEEAERALLAGREAARRAIA-------------------EGATLLAAGDMGIGN 167 (335)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHH-------------------TTCSEEEEEEECTTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-------------------CCCCEEEEeccccCc
Confidence 6778899999999999988764 245899999999976
No 244
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=20.15 E-value=1.7e+02 Score=24.80 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecC----C-CHHHHHHHHHHHHHh--CCcccc
Q 027947 160 AVSLETLKEFHRRRVLILANSGADLIAF-ETI----P-NKLEAKVFSKYVIIN--QRKMLL 212 (216)
Q Consensus 160 ~~s~ee~~~~h~~qi~~l~~~gvD~l~~-ET~----p-~~~Ea~a~~~a~~~~--~~~~~~ 212 (216)
.++.+.++. .++.+++.|||.|++ -|. . +.+|-+.+++.+.+. ++.||+
T Consensus 41 ~iD~~~l~~----lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi 97 (315)
T 3na8_A 41 GLDLPALGR----SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTI 97 (315)
T ss_dssp SBCHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 477766554 488888899998764 222 1 577888888888774 567775
No 245
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=20.12 E-value=1.6e+02 Score=25.50 Aligned_cols=46 Identities=13% Similarity=0.015 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCCC-EEEEecC-----------CCHHHHHHHHHHHHHhCCccccccc
Q 027947 170 HRRRVLILANSGAD-LIAFETI-----------PNKLEAKVFSKYVIINQRKMLLKKF 215 (216)
Q Consensus 170 h~~qi~~l~~~gvD-~l~~ET~-----------p~~~Ea~a~~~a~~~~~~~~~~~~~ 215 (216)
|.+-++.+.++++| .|-+--- .+.+.+..+++++++..++||+-|.
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi 200 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKL 200 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 44557777777876 7765521 3557788899999998889998874
No 246
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=20.01 E-value=76 Score=25.79 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=24.7
Q ss_pred cCCChHHHHHHHHHHHHhcCCeeecccccc
Q 027947 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (216)
Q Consensus 50 ll~~pe~V~~iH~~Yl~AGadiI~TnTy~a 79 (216)
+.+.|+.+...-+.|.++|||+|+-..|..
T Consensus 64 l~Dip~t~~~~~~~~~~~Gad~vTvH~~~g 93 (246)
T 2yyu_A 64 LHDIPNTVKQAMKGLARVGADLVNVHAAGG 93 (246)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEEGGGC
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 358899988888889999999998877754
Done!