BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027949
(216 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/216 (98%), Positives = 214/216 (99%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LADTDS+AEPQTIKINQPDQ GAAQAAQRSACCGS
Sbjct: 181 LADTDSKAEPQTIKINQPDQGAGAAQAAQRSACCGS 216
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/216 (98%), Positives = 215/216 (99%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALAD+YGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LADTDS+AEPQTIKINQPDQAGGA QAAQ+SACCGS
Sbjct: 181 LADTDSKAEPQTIKINQPDQAGGANQAAQKSACCGS 216
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/216 (98%), Positives = 214/216 (99%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LADTDSRAEPQTIKINQPDQAG A+QAA +SACCGS
Sbjct: 181 LADTDSRAEPQTIKINQPDQAGSASQAAPKSACCGS 216
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 212/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA+TDS+ EPQT+KINQPDQ G+AQA Q+SACCGS
Sbjct: 181 LAETDSKTEPQTLKINQPDQGAGSAQATQKSACCGS 216
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 212/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA++DS+ EPQT+KINQPDQ G+AQA+Q S+CCGS
Sbjct: 181 LAESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS 216
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/216 (93%), Positives = 212/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA++DS+ EPQT+KINQPDQ G+AQA+Q S+CCGS
Sbjct: 181 LAESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS 216
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 208/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPAR RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE+D
Sbjct: 1 MAAPPARPRADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFE SAKTN+NVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA+TDS+ EPQTIKINQ +Q G + A+Q+SACCGS
Sbjct: 181 LAETDSKTEPQTIKINQQEQGAGTSAASQKSACCGS 216
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/216 (95%), Positives = 213/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MATPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 SKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA++DS+AEPQTI+INQPDQA GAAQ+AQ+SACCGS
Sbjct: 181 LAESDSKAEPQTIRINQPDQAAGAAQSAQKSACCGS 216
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 204/206 (99%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLA++DS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTI+INQPDQA GA+Q+ Q+SACCGS
Sbjct: 191 QTIRINQPDQAAGASQSVQKSACCGS 216
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/206 (96%), Positives = 202/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK+RLA+TDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLAETDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQA QAAQ+SACCGS
Sbjct: 191 QTIKINQPDQAASGGQAAQKSACCGS 216
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 203/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV+EVFFSIARDIKQR+AD DS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADNDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QT+KINQPDQ G+AQAAQ+SACCGS
Sbjct: 191 QTLKINQPDQGAGSAQAAQKSACCGS 216
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/206 (96%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
I+INQPDQA G Q AQ+SACCGS
Sbjct: 191 TAIRINQPDQASGVGQTAQKSACCGS 216
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/206 (96%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
I+INQPDQA G Q AQ+SACCGS
Sbjct: 191 TAIRINQPDQAXGVGQTAQKSACCGS 216
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 202/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLA++D+RAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDNRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTI+INQPDQ G AQ AQ+SACCGS
Sbjct: 191 QTIRINQPDQGAGGAQTAQKSACCGS 216
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 201/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQA + AQ+SACCGS
Sbjct: 191 QTIKINQPDQAASGGRPAQKSACCGS 216
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 201/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK+LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLA+TDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQA QA Q+SACCGS
Sbjct: 191 QTIKINQPDQAANGGQAPQKSACCGS 216
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 202/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG+RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR+++TDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTI+INQPDQA QAAQ+SACCGS
Sbjct: 191 QTIRINQPDQAANGGQAAQKSACCGS 216
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 201/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQA AAQ+SACCGS
Sbjct: 191 QTIKINQPDQAATGGLAAQKSACCGS 216
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 201/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+KINQPD G +QAAQ+SACCGS
Sbjct: 191 STLKINQPDAGAGGSQAAQKSACCGS 216
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD KRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQA Q AQ+SACCGS
Sbjct: 191 QTIKINQPDQATSGGQPAQKSACCGS 216
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 201/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR+++TDSRAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPD + QAAQ+SACCGS
Sbjct: 191 QTIKINQPDPSASGGQAAQKSACCGS 216
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ+SACCGS
Sbjct: 191 QTIKINQPDQTATGGLAAQKSACCGS 216
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/206 (95%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI+Q DQA GA QA Q+SACCGS
Sbjct: 191 ATIKISQTDQAAGAGQATQKSACCGS 216
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/216 (95%), Positives = 209/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LADTDS+AEP TIKINQ DQ A QAAQ+SACCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 211/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L+D+DS++EPQTIKINQ D GA+Q AQ+SACCGS
Sbjct: 181 LSDSDSKSEPQTIKINQADNGAGASQTAQKSACCGS 216
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQRL+DTDSRAEP
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI+Q DQA GA QA Q+SACCG+
Sbjct: 191 ATIKISQTDQAAGAGQATQKSACCGT 216
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 199/206 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLADTDSRAEP
Sbjct: 131 DMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI+Q DQA GA QA +SACCGS
Sbjct: 191 ATIKISQTDQAAGAGQATHKSACCGS 216
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/205 (96%), Positives = 202/205 (98%), Gaps = 1/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD++AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDTKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
TIKINQ DQ+GGA QAAQ+SACCG
Sbjct: 191 STIKINQ-DQSGGAGQAAQKSACCG 214
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/216 (89%), Positives = 207/216 (95%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA+ PAR RADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MASGPARGRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT++GQALADE+GIKFFETSAKTNLNVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA++D++ EPQTIKIN+PD A G +AA+RS+CC S
Sbjct: 181 LAESDTKVEPQTIKINKPDPAKGPGKAAERSSCCTS 216
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/206 (94%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQRL+DTD+RAEP
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDARAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TI+I+Q DQA GA QA Q+SACCGS
Sbjct: 191 ATIRISQTDQAAGAGQATQKSACCGS 216
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/206 (93%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DIKQRLADTD+RAEP
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQ DQ G +QA Q+SACCG+
Sbjct: 191 QTIKINQSDQGAGTSQATQKSACCGT 216
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 211/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L+++DS+ EPQ I+INQ DQAG + QAAQ+S+CCGS
Sbjct: 181 LSESDSKTEPQAIRINQSDQAGTSGQAAQKSSCCGS 216
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/205 (96%), Positives = 201/205 (98%), Gaps = 1/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYVYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
TIKINQ DQ+GGA QAAQ+SACCG
Sbjct: 191 STIKINQ-DQSGGAGQAAQKSACCG 214
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/205 (94%), Positives = 198/205 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDSR+EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
QTIKINQ D A QAA +SACCG
Sbjct: 191 QTIKINQQDPAANGGQAATKSACCG 215
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 200/206 (97%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNI+NWIRNIEQHASDNVNKILVGNKA
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVGNKA 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP
Sbjct: 132 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 191
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTI+INQPD + QAAQ+S CCGS
Sbjct: 192 QTIQINQPDASASGGQAAQKS-CCGS 216
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/234 (83%), Positives = 207/234 (88%), Gaps = 18/234 (7%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSK------------------GQALADEYGIKFFETSAKT 162
VNKILVGNKADMDESKR T GQALADEYGIKFFETSAKT
Sbjct: 121 VNKILVGNKADMDESKRVCLTHSLFVHPFHFPCTSISCDYYGQALADEYGIKFFETSAKT 180
Query: 163 NLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
N+NV+EVFFSIARDIKQRLA++DS+ EPQT+KINQPDQ G+AQA+Q S+CCGS
Sbjct: 181 NMNVDEVFFSIARDIKQRLAESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS 234
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/206 (92%), Positives = 199/206 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGS TTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+KINQP+ G +Q +Q+SACCGS
Sbjct: 191 STLKINQPEAGAGGSQTSQKSACCGS 216
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/206 (93%), Positives = 198/206 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQRLA+TDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLAETDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TI+IN PD A G+A+ +SACCGS
Sbjct: 191 HTIRINPPDHAAGSAETPAKSACCGS 216
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/206 (94%), Positives = 200/206 (97%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNI+NWIRNIEQHASDNVNKILVGNKA
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVGNKA 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ+LADTDSRAEP
Sbjct: 132 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRAEP 191
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTI+INQPD + QAAQ+S CCGS
Sbjct: 192 QTIQINQPDASASGGQAAQKS-CCGS 216
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/216 (92%), Positives = 210/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGD+GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L+++DS+ EPQ+I+INQ DQAG A Q AQ+S+CCGS
Sbjct: 181 LSESDSKTEPQSIRINQSDQAGTAGQGAQKSSCCGS 216
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/205 (95%), Positives = 200/205 (97%), Gaps = 1/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD++AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
TIKINQ D A G+ QAAQ+SACCG
Sbjct: 191 TTIKINQ-DSATGSGQAAQKSACCG 214
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 198/206 (96%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG+RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ S CCGS
Sbjct: 191 QTIKINQPDQPA----AAQNSTCCGS 212
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/205 (93%), Positives = 197/205 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTS+GQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADT S EP
Sbjct: 131 DMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
Q+IKINQ DQA QAAQ+SACCG
Sbjct: 191 QSIKINQQDQAANGGQAAQKSACCG 215
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/221 (91%), Positives = 211/221 (95%), Gaps = 5/221 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKR-----AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
VNKILVGNKADMDESKR +VPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+
Sbjct: 121 VNKILVGNKADMDESKRVRTFSSVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAK 180
Query: 176 DIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
DIKQRL+D+DS++EPQTIKINQ D GA+Q AQ+SACCGS
Sbjct: 181 DIKQRLSDSDSKSEPQTIKINQADNGAGASQTAQKSACCGS 221
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/206 (97%), Positives = 204/206 (99%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS++EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ GAAQAAQ+SACCGS
Sbjct: 191 QTIKINQPDQGAGAAQAAQKSACCGS 216
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/206 (95%), Positives = 197/206 (95%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ CCGS
Sbjct: 191 QTIKINQPDQPA----AAQNFTCCGS 212
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 196/206 (95%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETS KTNLNVEEV FSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSTKTNLNVEEVLFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ S CCGS
Sbjct: 191 QTIKINQPDQPA----AAQNSTCCGS 212
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/206 (97%), Positives = 203/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKINQPDQAGGA QA Q+SACCGS
Sbjct: 191 TTIKINQPDQAGGAGQAGQKSACCGS 216
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/205 (93%), Positives = 197/205 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
D DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DSDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDS++EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
QTIKINQ D A QAA +SACCG
Sbjct: 191 QTIKINQQDPAANGGQAATKSACCG 215
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/205 (93%), Positives = 198/205 (96%), Gaps = 1/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD RAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDHRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
T+KINQ D A GA +AA +S+CCG
Sbjct: 191 TTLKINQ-DSAAGAGEAANKSSCCG 214
>gi|388518593|gb|AFK47358.1| unknown [Medicago truncatula]
Length = 216
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/206 (97%), Positives = 203/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTI TAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTIITAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS++EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ GAAQAAQ+SACCGS
Sbjct: 191 QTIKINQPDQGAGAAQAAQKSACCGS 216
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/206 (94%), Positives = 197/206 (95%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDE+KRAVPTSKGQALADEYGIKFFETSAKTNL +EEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDENKRAVPTSKGQALADEYGIKFFETSAKTNLTLEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ S CCGS
Sbjct: 191 QTIKINQPDQPA----AAQNSTCCGS 212
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 196/206 (95%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQER RTITTAYYRGA GILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ AAQ S CCGS
Sbjct: 191 QTIKINQPDQPA----AAQNSTCCGS 212
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 203/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGV KSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVSKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLN+EEVFFSIARDIKQRLADTDS++EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNMEEVFFSIARDIKQRLADTDSKSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQPDQ GAAQAAQ+SACCGS
Sbjct: 191 QTIKINQPDQGAGAAQAAQKSACCGS 216
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 202/206 (98%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKIN+PD A G QAAQ+SACCGS
Sbjct: 191 QTIKINKPDAAAGDGQAAQKSACCGS 216
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/206 (93%), Positives = 199/206 (96%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA+TDS+ E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+ IKIN+PDQ G A AAQRSACCGS
Sbjct: 191 KAIKINKPDQ-GSEAPAAQRSACCGS 215
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/205 (92%), Positives = 198/205 (96%), Gaps = 1/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNW+RNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD +AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDHKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
T+KINQ D A GA +AA +S+CCG
Sbjct: 191 TTLKINQ-DSAAGAGEAANKSSCCG 214
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/206 (93%), Positives = 198/206 (96%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VFFSIARDIKQRL+DTD++AEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T KI+ DQA GA AAQ+SACCGS
Sbjct: 191 ATSKIH-LDQASGAGPAAQKSACCGS 215
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/216 (96%), Positives = 212/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LADTDSR E T+KINQPDQAGGA QAAQ+SACCGS
Sbjct: 181 LADTDSRTESTTLKINQPDQAGGAGQAAQKSACCGS 216
>gi|871514|emb|CAA90079.1| small G protein [Pisum sativum]
Length = 215
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/205 (92%), Positives = 194/205 (94%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGD VGKSCLLLRFSDGSFTTSFI TIGIDFKIRTIELDGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDRRVGKSCLLLRFSDGSFTTSFIATIGIDFKIRTIELDGKPIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADTDSR+EP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
QTIKINQ D A QAA +SACCG
Sbjct: 191 QTIKINQQDPAANGGQAATKSACCG 215
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFT SFITTIGIDFKIRT+ELD
Sbjct: 1 MAATPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESK+A+PTSKGQALADEYGI FFET AKTNLNVE+VFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKKALPTSKGQALADEYGIPFFETGAKTNLNVEQVFFSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L TDS+ E +TIKI++P+ G A A RSACCGS
Sbjct: 181 LVKTDSKPEDRTIKIDKPECNGEA--TASRSACCGS 214
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 199/206 (96%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL+KLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTS+GQALADEYGIKFFETSAKTN NVE+VFFSIARDIKQR+A++DS+AEP
Sbjct: 131 DMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQRIAESDSKAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI++PD A G+A A ++SACCGS
Sbjct: 191 LTIKISKPDPAIGSATAQEKSACCGS 216
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 199/206 (96%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYD+LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKRIKLQIWD
Sbjct: 11 DYDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRL+++DS+ E
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSESDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TI IN+PD GG A A+Q+SACCGS
Sbjct: 191 RTISINRPD--GGEASASQKSACCGS 214
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 207/216 (95%), Gaps = 1/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA+TDS+ E +TIKIN+P + A +Q+SACCGS
Sbjct: 181 LAETDSKTEDRTIKINKP-EGDAEATTSQKSACCGS 215
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 199/206 (96%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKR+KLQIWD
Sbjct: 25 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 84
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 85 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 144
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTS+GQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA++DS+ E
Sbjct: 145 DMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESDSKPED 204
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TI IN+P+ GG A A+Q+SACCGS
Sbjct: 205 RTISINRPE--GGEASASQKSACCGS 228
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 199/206 (96%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTS+GQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA++DS+ E
Sbjct: 131 DMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TI IN+P+ GG A A+Q+SACCGS
Sbjct: 191 RTISINRPE--GGEASASQKSACCGS 214
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 206/216 (95%), Gaps = 1/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
LA+TDS+ E +TIKIN+P + A Q+SACCGS
Sbjct: 181 LAETDSKTEDRTIKINKP-EGDAEATTLQKSACCGS 215
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 202/215 (93%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE D
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNKADMDESKR VPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCG 215
LADTDS+AEP IKIN A + AQ+SACCG
Sbjct: 181 LADTDSKAEPAGIKINNQLDHATAGEVAQKSACCG 215
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/206 (92%), Positives = 195/206 (94%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWI NIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD S+ E
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSSKTE 190
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCG 215
P IKIN P G A +AAQ+SACCG
Sbjct: 191 PTGIKIN-PQDKGSAGEAAQKSACCG 215
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 206/216 (95%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE D
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKR VPTSKGQALADEYGIKFFETSAKT+LNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKI-NQPDQAGGAAQAAQRSACCG 215
LADTDS+AEP IKI NQ DQA A + AQ+SACCG
Sbjct: 181 LADTDSKAEPAGIKIDNQKDQA-TAGEVAQKSACCG 215
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLADTD+RAEP
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDTRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+KI DQAGG QAAQ+S+CCGS
Sbjct: 191 TTLKITPTDQAGGGGQAAQKSSCCGS 216
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/206 (92%), Positives = 194/206 (94%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWI NIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV EVFFSIARDIKQRLADTD S+ E
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEVFFSIARDIKQRLADTDSSKTE 190
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCG 215
P IKIN P G A +AAQ+SACCG
Sbjct: 191 PTGIKIN-PQDKGSAGEAAQKSACCG 215
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 193/206 (93%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA+TDS+ E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TIKIN G AA SACCGS
Sbjct: 191 KTIKINNKTDQGADKPAASGSACCGS 216
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/207 (91%), Positives = 196/207 (94%), Gaps = 3/207 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD+D+R E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 191 Q-TIKINQPDQAGGAAQAAQRSACCGS 216
Q +I I DQ+G QAA +SACCGS
Sbjct: 191 QPSITIKPADQSGN--QAAAKSACCGS 215
>gi|357472677|ref|XP_003606623.1| Small GTP-binding protein [Medicago truncatula]
gi|355507678|gb|AES88820.1| Small GTP-binding protein [Medicago truncatula]
Length = 216
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/217 (91%), Positives = 205/217 (94%), Gaps = 3/217 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITT--AYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
GKRIKLQIWDTAGQERF + YYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHAS
Sbjct: 61 GKRIKLQIWDTAGQERFSFVINNFTYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHAS 120
Query: 119 DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 178
DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK
Sbjct: 121 DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 180
Query: 179 QRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCG 215
QRLADTD++AEP TIKINQ D A G+ QAAQ+SACCG
Sbjct: 181 QRLADTDNKAEPTTIKINQ-DSATGSGQAAQKSACCG 216
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 196/206 (95%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD KRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL+GNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA+TDS+ E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TIKIN+ + GG A AA SACCGS
Sbjct: 191 KTIKINKAE--GGDAPAASGSACCGS 214
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/206 (91%), Positives = 196/206 (95%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD KRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL+GNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA+TDS+ E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TIKIN+ + GG A AA SACCGS
Sbjct: 191 KTIKINKTE--GGDAPAASGSACCGS 214
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/206 (89%), Positives = 195/206 (94%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK+L+GNKA
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLIGNKA 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAV T++GQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA+TDS+ E
Sbjct: 132 DMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED 191
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKIN+ Q G +Q+SACCGS
Sbjct: 192 QTIKINKTGQ-GSEDPESQKSACCGS 216
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/214 (85%), Positives = 198/214 (92%), Gaps = 2/214 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA+ RARADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MASGSGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDNSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT KGQALADE+GIKFFETSAKTN NVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVEDVFFTIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
LA++D++AEP +++N+PD + G + + +CC
Sbjct: 181 LAESDAKAEPGNLRLNRPDTSRGPHK--KEKSCC 212
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 198/217 (91%), Gaps = 5/217 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA +RARADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAGGSRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPD---QAGGAAQAAQRSACC 214
LA+TDS+ P+ K +PD AG + Q S+CC
Sbjct: 181 LAETDSK--PEAAKNAKPDVKLLAGNSQQKPASSSCC 215
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/200 (96%), Positives = 197/200 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQ 200
L+DTDSRAEP TI+I+Q DQ
Sbjct: 181 LSDTDSRAEPATIRISQTDQ 200
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/216 (91%), Positives = 205/216 (94%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++TDS+ E +TIKI + A AAQ+SACCGS
Sbjct: 181 LSETDSKPEDRTIKIKS--EGEAEAAAAQKSACCGS 214
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/206 (89%), Positives = 193/206 (93%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK+LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGI FFETSAKTNLNVE+VFFSIARDIKQRL+++DS+ E
Sbjct: 131 DMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIARDIKQRLSESDSKPEG 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI +A A AQ+SACCGS
Sbjct: 191 GTIKIKPEGEADAA--GAQKSACCGS 214
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/216 (89%), Positives = 204/216 (94%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWI+NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V+KILVGNKADMDESKRAVPTSKGQALADEYGI+FFETSAKTN+NVE+VFFSIARDIKQR
Sbjct: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++ DS+ E TIKIN A +A A Q+SACCGS
Sbjct: 181 LSEADSKPEGGTIKINTEGDA--SAAAGQKSACCGS 214
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/216 (91%), Positives = 205/216 (94%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++TDS+ E +TIKI +A A AQ+SACCGS
Sbjct: 181 LSETDSKPEDRTIKIKAEGEA--DAAEAQKSACCGS 214
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/216 (91%), Positives = 206/216 (95%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++TDS+ E +TIKI +A A AAQ+SACCGS
Sbjct: 181 LSETDSKPEDRTIKIKAEGEA--DAAAAQKSACCGS 214
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/227 (81%), Positives = 198/227 (87%), Gaps = 21/227 (9%)
Query: 11 DYDYLIKLLLIGDSGV---------------------GKSCLLLRFSDGSFTTSFITTIG 49
DYDYL+KLLLIGDSG+ GKSCLLLRFSD SFTTSFITTIG
Sbjct: 11 DYDYLVKLLLIGDSGLNLIAFGSYLICTKANYLILGLGKSCLLLRFSDDSFTTSFITTIG 70
Query: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109
IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 71 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 130
Query: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169
IRNIEQHASDNVNKILVGNKADMDESKRAVPTS+GQALADEYGIKFFETSAKTN NVE+V
Sbjct: 131 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQV 190
Query: 170 FFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
FFSIARDIKQR+A++DS+AEP TIKI++PD A +A A ++SACCGS
Sbjct: 191 FFSIARDIKQRIAESDSKAEPLTIKISKPDPAXXSATAQEKSACCGS 237
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/216 (91%), Positives = 206/216 (95%), Gaps = 1/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++TDS+ E +TIKI + + AA AAQ SACCGS
Sbjct: 181 LSETDSKPEDRTIKI-KAEGEAEAAAAAQNSACCGS 215
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/215 (86%), Positives = 195/215 (90%), Gaps = 1/215 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA +RARADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAGGSRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADE+GIKFFETSAKTN+NVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIARDIKQR 180
Query: 181 LADTDSRAE-PQTIKINQPDQAGGAAQAAQRSACC 214
LA+TDS+ E P AGGA A S+CC
Sbjct: 181 LAETDSKPEQPAKAAPGVKLSAGGAQPKAAGSSCC 215
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 193/216 (89%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA RARADYDYL+KLLLIGDSGVGKSCLLLRF+D SFTTSFITTIGIDFKIR ELD
Sbjct: 1 MAAATGRARADYDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYR AMGILLVYDVTDESSFNNIRNWI+NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAV T++GQ LADEYGIKFFETSAKTN+NVE+ FFSIA+DI +R
Sbjct: 121 VNKILVGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
L++TD R PQTI IN P+ A G A A+ +S CC S
Sbjct: 181 LSETDFRPAPQTITINNPNTAEGPASASSKSRCCSS 216
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 197/217 (90%), Gaps = 5/217 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA +R+RADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAGGSRSRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPD---QAGGAAQAAQRSACC 214
LA++DS+ P+ K +PD AG A ++CC
Sbjct: 181 LAESDSK--PEAAKDAKPDVKLLAGNAQTKPASASCC 215
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/206 (89%), Positives = 192/206 (93%), Gaps = 2/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVP SKGQA ADEYGIKFFETSAKTNLNVE+VFF IARDIKQRL++TDS+ E
Sbjct: 131 DMDESKRAVPPSKGQAFADEYGIKFFETSAKTNLNVEQVFFFIARDIKQRLSETDSKPEG 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+TIKI + A AAQ+SACCGS
Sbjct: 191 RTIKIKS--EGEAEAAAAQKSACCGS 214
>gi|1370192|emb|CAA98173.1| RAB8B [Lotus japonicus]
Length = 187
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/187 (94%), Positives = 183/187 (97%)
Query: 30 CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM 89
CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM
Sbjct: 1 CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM 60
Query: 90 GILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALAD 149
GILLVYDVTDESSFNNI+NWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALAD
Sbjct: 61 GILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALAD 120
Query: 150 EYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQ 209
EYGIKFFETSAKTNLNV+EVFFSIARDIKQR+AD DS+AEPQT+KINQPDQ G+AQAA
Sbjct: 121 EYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADNDSKAEPQTLKINQPDQGAGSAQAAP 180
Query: 210 RSACCGS 216
+SACCGS
Sbjct: 181 KSACCGS 187
>gi|15242773|ref|NP_195972.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|75181251|sp|Q9LZD4.1|RAE1D_ARATH RecName: Full=Ras-related protein RABE1d; Short=AtRABE1d; AltName:
Full=Ras-related protein Rab8C; Short=AtRab8C
gi|7378637|emb|CAB83313.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|14334902|gb|AAK59629.1| unknown protein [Arabidopsis thaliana]
gi|15810625|gb|AAL07200.1| unknown protein [Arabidopsis thaliana]
gi|332003234|gb|AED90617.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 216
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/214 (86%), Positives = 200/214 (93%), Gaps = 1/214 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
L +TD++AEPQ IKI + D A ++ A++SACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSS-TAEKSACC 213
>gi|21592670|gb|AAM64619.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/214 (85%), Positives = 199/214 (92%), Gaps = 1/214 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
NKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SIA+DIKQR
Sbjct: 121 FNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
L +TD++AEPQ IKI + D A ++ A++SACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSS-TAEKSACC 213
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 194/216 (89%), Gaps = 4/216 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA+ RARADYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRT++LD
Sbjct: 1 MASGAGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAV T +GQALA+E+GIKFFETSAKTNLNVE+VFF+IA DIK+R
Sbjct: 121 VNKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRR 180
Query: 181 LADTDSRAEPQTIK--INQPDQAGGAAQAAQRSACC 214
LA+TDSR EP I + P + G+ +A +S CC
Sbjct: 181 LAETDSRPEPPRINNIVLDPSKDQGSDKA--KSTCC 214
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/215 (84%), Positives = 198/215 (92%), Gaps = 1/215 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPD-QAGGAAQAAQRSACC 214
L ++D++AEPQ IKI + D ++ ++SACC
Sbjct: 181 LTESDTKAEPQGIKITKKDANKASSSSTTEKSACC 215
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/215 (84%), Positives = 198/215 (92%), Gaps = 1/215 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPD-QAGGAAQAAQRSACC 214
L ++D++AEPQ IKI + D ++ ++SACC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 177/212 (83%), Positives = 189/212 (89%), Gaps = 5/212 (2%)
Query: 7 RARAD-YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
RARAD YDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD KRIK
Sbjct: 4 RARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIK 63
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL
Sbjct: 64 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 123
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNKADMD SKRAVP +KGQALADEYGIKFFETSAKTN+NVE+VFF+IARDIK RLA++D
Sbjct: 124 VGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTRLAESD 183
Query: 186 SRAEPQTIKINQPD---QAGGAAQAAQRSACC 214
S+ E + +PD ++GGA +CC
Sbjct: 184 SKPEAKNAG-GKPDVTLKSGGAQPKPASGSCC 214
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/212 (83%), Positives = 188/212 (88%), Gaps = 5/212 (2%)
Query: 7 RARAD-YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
RARAD YDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELD KRIK
Sbjct: 4 RARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIK 63
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL
Sbjct: 64 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 123
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNKADMD SKRAVP +KGQALADEYGIKFFETSAKTN+NVE+VFF+IARDIK RLA++D
Sbjct: 124 VGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTRLAESD 183
Query: 186 SRAEPQTIKINQPD---QAGGAAQAAQRSACC 214
S+ + + +PD GGA Q +CC
Sbjct: 184 SKPDAKN-AAGKPDVKLTPGGAQQKPASGSCC 214
>gi|145049708|gb|ABP35527.1| ARF small GTPase [Ipomoea batatas]
Length = 196
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/206 (83%), Positives = 178/206 (86%), Gaps = 20/206 (9%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI------ 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 65 --------------YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 110
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIA+DIKQRL+DTDS+AEP
Sbjct: 111 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAKDIKQRLSDTDSKAEP 170
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKINQP+ Q AQ+SACCGS
Sbjct: 171 STIKINQPESGAATGQLAQKSACCGS 196
>gi|414867230|tpg|DAA45787.1| TPA: hypothetical protein ZEAMMB73_964234 [Zea mays]
Length = 320
Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 179/192 (93%), Gaps = 2/192 (1%)
Query: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAY
Sbjct: 131 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAY 190
Query: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Y GAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK DMDESKRAVPTSKG
Sbjct: 191 YSGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVDMDESKRAVPTSKG 250
Query: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGA 204
QALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRL++TDS+ E +TIKI +A
Sbjct: 251 QALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDSKPEDRTIKIKAEGEA--D 308
Query: 205 AQAAQRSACCGS 216
A AQ+SACCGS
Sbjct: 309 AAEAQKSACCGS 320
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 195/217 (89%), Gaps = 2/217 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPP+R+R DYD+LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELD
Sbjct: 1 MAAPPSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK DMD +KR V T++GQ LADEYGIKFFETSAKTN NVE+VFF++ARDIKQR
Sbjct: 121 VNKILVGNKVDMD-AKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTMARDIKQR 179
Query: 181 LADTDSRA-EPQTIKINQPDQAGGAAQAAQRSACCGS 216
L +T + A EP TI+I++PD +++ S+CC +
Sbjct: 180 LTETVAAATEPPTIQISRPDPDQAGTASSRWSSCCNT 216
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 198/219 (90%), Gaps = 5/219 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA P+R+R DYD+LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELD
Sbjct: 1 MAAAPSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
G+R+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GRRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK DMD +KR V T++GQ LADEYGIKFFETSAKTN NVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKVDMD-AKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFSIARDIKQR 179
Query: 181 LADTDSRA-EPQTIKIN--QPDQAGGAAQAAQRSACCGS 216
L +T + A EP TI+I+ +PD+AGGAA + S+CC +
Sbjct: 180 LTETVAAANEPPTIQISRQEPDRAGGAA-SRWSSSCCNT 217
>gi|255645965|gb|ACU23471.1| unknown [Glycine max]
Length = 169
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/165 (98%), Positives = 163/165 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE D
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLN 165
VNKILVGNKADMDESKR VPTSKGQALADEYGIKFFETSAKT+LN
Sbjct: 121 VNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLN 165
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/216 (76%), Positives = 185/216 (85%), Gaps = 4/216 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA + +YD+LIKLLLIGDSGVGKS LLLRFSD FTTS+ITT+GID+K R IELD
Sbjct: 1 MAPLRFASEKNYDHLIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+I LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI NWIR+IEQH+SDN
Sbjct: 61 GKKIMLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDN 120
Query: 121 -VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 179
VNKILVGNK DMDESKRAVP SKGQALA++YGIKFFETSAKTNLNV+E FFSIARDIKQ
Sbjct: 121 IVNKILVGNKVDMDESKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQ 180
Query: 180 RLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCG 215
RL DS+ P I+IN+ + A AA+ +Q+S CCG
Sbjct: 181 RLP--DSKKTPSRIRINKHNNA-TAARGSQKSECCG 213
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 196/219 (89%), Gaps = 7/219 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA P+R+R D+D+LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELD
Sbjct: 1 MAGAPSRSRGDFDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK DMD +KR V T++GQ LADEYG+KFFETSAKTN NVE+VFF+IARDIKQR
Sbjct: 121 VNKILVGNKVDMD-TKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQR 179
Query: 181 LADT-DSRAEPQTIKIN--QPDQAGGAAQAAQRSACCGS 216
L +T + AEP TI+I+ +PDQ AA +++ SACC +
Sbjct: 180 LTETVAAAAEPPTIQISRQEPDQ---AAASSRWSACCNT 215
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 189/213 (88%), Gaps = 7/213 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A AD+DY IKLLLIGDSGVGKSC+LLRFSD SFTTSFITTIGIDFKIRTIELDG+R+KLQ
Sbjct: 9 AGADHDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQ 68
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDESSFNNIRNW++NIEQ+AS+NV+++LVG
Sbjct: 69 VWDTAGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVG 128
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NKADMDESKRAV T++GQALA+EYGI+FFETSAKT NVEE FF+IARDIK+RL ++++
Sbjct: 129 NKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEA- 187
Query: 188 AEPQT----IKINQPD--QAGGAAQAAQRSACC 214
A P+ I+I +PD GA A QRSACC
Sbjct: 188 ARPEVASSNIQITRPDPGTGPGAGAAGQRSACC 220
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 190/213 (89%), Gaps = 7/213 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A AD+DY IKLLLIGDSGVGKSC+LLRFSD SFTTSFITTIGIDFKIRTIELDG+R+KLQ
Sbjct: 9 AGADHDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQ 68
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDESSFNNIRNW++NIEQ+AS+NV+++LVG
Sbjct: 69 VWDTAGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVG 128
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NKADMDESKRAV T++GQALA+EYGI+FFETSAKT NVEE FF+IARDIK+RL ++++
Sbjct: 129 NKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEA- 187
Query: 188 AEPQT----IKINQPD--QAGGAAQAAQRSACC 214
A P+ I+I +PD GA AAQRSACC
Sbjct: 188 ARPEVASSNIQITRPDPGTGTGAGAAAQRSACC 220
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/200 (83%), Positives = 187/200 (93%), Gaps = 2/200 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPP+R+R DYD+LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELD
Sbjct: 1 MAAPPSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF+NIRNWIRNIEQHASDN
Sbjct: 61 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK DMD +KR V T++GQ LADEYGIKFFETSAKTN NVE+VFF++ARD+KQR
Sbjct: 121 VNKILVGNKVDMD-AKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMARDVKQR 179
Query: 181 LADT-DSRAEPQTIKINQPD 199
L +T + AEP TI+I++PD
Sbjct: 180 LTETVAAAAEPPTIQISRPD 199
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/171 (97%), Positives = 170/171 (99%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTT FI+TIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTGFISTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF 171
VNKILVGNKADMDES+RAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF
Sbjct: 121 VNKILVGNKADMDESERAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF 171
>gi|195609720|gb|ACG26690.1| ras-related protein ARA-3 [Zea mays]
gi|414591886|tpg|DAA42457.1| TPA: ras protein ARA-3 [Zea mays]
Length = 224
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/206 (80%), Positives = 187/206 (90%), Gaps = 8/206 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPP+R+R DYD+LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELD
Sbjct: 1 MAAPPSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN------NIRNWIRNIE 114
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF+ +IRNWIRNIE
Sbjct: 61 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDSTQQHAHIRNWIRNIE 120
Query: 115 QHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 174
QHASDNVNKILVGNK DMD +KR V T++GQ LADEYGIKFFETSAKTN NVE+VFF++A
Sbjct: 121 QHASDNVNKILVGNKVDMD-AKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMA 179
Query: 175 RDIKQRLADT-DSRAEPQTIKINQPD 199
RD+KQRL +T + AEP TI+I++PD
Sbjct: 180 RDVKQRLTETVAAAAEPPTIQISRPD 205
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/155 (96%), Positives = 152/155 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKF 155
VNKILVGNKADMDESKRAVPTSKGQALADEY F
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYASNF 155
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 170/206 (82%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
R DYDYLIKLLLIGDSGVGKSCLLLRFS+ SFT+SFITTIGIDFKI+ I +D K IKLQI
Sbjct: 5 RQDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKLQI 64
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT+AYYRGAMGILLVYDVTDESSFNNIRNW+RNIEQHASDNVNK+LVGN
Sbjct: 65 WDTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDNVNKVLVGN 124
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K DMDESKR VP S+GQALADE+GI+FFETSAK+N+ V+EVF SIA+D+ RL D+ + +
Sbjct: 125 KCDMDESKRRVPYSQGQALADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDSQTDS 184
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+ A A Q CC
Sbjct: 185 PSAGSGSGNVHLSSTTASAKQSKGCC 210
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 177/214 (82%), Gaps = 6/214 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F S+A+DIK+R
Sbjct: 121 VNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ DT + +PQ + QP G A ++ ACC
Sbjct: 180 MIDTPNE-QPQVV---QPGTNLG-ANNNKKKACC 208
>gi|108711785|gb|ABF99580.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 161/165 (97%), Positives = 163/165 (98%), Gaps = 1/165 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET-SAKTNL 164
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET SAK+ L
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETVSAKSQL 165
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 170/214 (79%), Gaps = 11/214 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YD+L+KLLLIGDSGVGKSCLLLRFSDGSFT SFI TIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNWIRNIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F +A+DIK+R
Sbjct: 121 VNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKR 179
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ DT N PD +++ CC
Sbjct: 180 MIDTP----------NDPDHTICITPNNKKNTCC 203
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 170/207 (82%), Gaps = 6/207 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A YDYLIKLLLIGDSGVGKSCLLLRFSD SFT SFITTIGIDFKIRTIELDGKRIKLQIW
Sbjct: 7 ASYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 66
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTITTAYYRGAMGILL YDVTDE SFNNIRNWIRNIEQHAS+ VNKIL+GNK
Sbjct: 67 DTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRNWIRNIEQHASEGVNKILIGNK 126
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT-DSRA 188
D+ + K+ + +GQALADE+GIKF ETSAK+N+ VEE F+ +ARDIK+RL DT +
Sbjct: 127 CDILD-KKVISKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKRLIDTAQEKT 185
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACCG 215
+ +T +Q G AA A CCG
Sbjct: 186 DLKTAGNVNVNQKGNAATA----GCCG 208
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 175/213 (82%), Gaps = 6/213 (2%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
AP + A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+G
Sbjct: 5 GAPASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEG 64
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+V
Sbjct: 65 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSV 124
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NK+L+GNK DM E K+ V +++G++LADEYGIKF ETSAK ++NVEE F S+A+DIK+R+
Sbjct: 125 NKMLIGNKCDMAE-KKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRM 183
Query: 182 ADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
DT + EP + ++PD ++ CC
Sbjct: 184 IDTPN--EPPQLH-SKPDLTQNPNN--KKRGCC 211
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 172/210 (81%), Gaps = 16/210 (7%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+GKRIKLQIW
Sbjct: 13 AAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIW 72
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+++VNK+L+GNK
Sbjct: 73 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNK 132
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ E K+ V +S+G+ALADEYGIKF ETSAK ++NVEE F S+A+DIK+R+ DT
Sbjct: 133 CDLPE-KKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---- 187
Query: 190 PQTIKINQPDQAGGAAQ-----AAQRSACC 214
N+P+ G AQ A++ CC
Sbjct: 188 ------NEPNNQTGNAQLSDTAPAKQKNCC 211
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/170 (84%), Positives = 157/170 (92%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRT+ELDGKR+KLQIWDT
Sbjct: 8 YDHLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL YDVTDE+SFNN+RNW+RNIEQHAS+NVNKILVGNK D
Sbjct: 68 AGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMRNIEQHASENVNKILVGNKCD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M E KR + ++G+ALADE+GI FFETSAK N+ VE+ FFSIARDIK RL
Sbjct: 128 M-EDKRVISHARGKALADEFGIPFFETSAKANVKVEDAFFSIARDIKNRL 176
>gi|297806315|ref|XP_002871041.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
gi|297316878|gb|EFH47300.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/165 (86%), Positives = 154/165 (93%), Gaps = 1/165 (0%)
Query: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109
IDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 40 IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 99
Query: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169
++NIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE V
Sbjct: 100 MKNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVENV 159
Query: 170 FFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
F SIA+DIKQRL +TD++AEPQ IKI + D A ++ A++SACC
Sbjct: 160 FLSIAKDIKQRLTETDTKAEPQGIKITKQDTASSSS-TAEKSACC 203
>gi|79326857|ref|NP_001031827.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|332003235|gb|AED90618.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 206
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/165 (85%), Positives = 154/165 (93%), Gaps = 1/165 (0%)
Query: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109
IDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 40 IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 99
Query: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169
++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE V
Sbjct: 100 MKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENV 159
Query: 170 FFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
F SIA+DIKQRL +TD++AEPQ IKI + D A ++ A++SACC
Sbjct: 160 FMSIAKDIKQRLTETDTKAEPQGIKITKQDTAASSS-TAEKSACC 203
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 171/212 (80%), Gaps = 4/212 (1%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A + +YDYL+KLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIE +GK
Sbjct: 2 AKASGGTGNYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIEQEGK 61
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
R+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIRNW+R I+QHASDNVN
Sbjct: 62 RLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQQHASDNVN 121
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
KIL+GNK DM + K+ + T++GQALADE+GIKFFETSAK N+NVE+ F IARD+ RL
Sbjct: 122 KILIGNKCDMLD-KKVIETARGQALADEFGIKFFETSAKNNINVEKAFTEIARDVMVRLR 180
Query: 183 DTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ +++ + + D A G Q + CC
Sbjct: 181 EQEAKDGGKK-GGDTLDLASGGKQG--KKGCC 209
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/197 (74%), Positives = 168/197 (85%), Gaps = 6/197 (3%)
Query: 1 MAAPP---ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 57
M+AP A A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTI
Sbjct: 1 MSAPSVTSANKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTI 60
Query: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHA 117
EL+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA
Sbjct: 61 ELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHA 120
Query: 118 SDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
+++VNK+L+GNK D+ E K+ V +S+G+ALADE+GIKF ETSAK ++NVEE F S+A+DI
Sbjct: 121 TESVNKMLIGNKCDLPE-KKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDI 179
Query: 178 KQRLADTDSR--AEPQT 192
K+R+ D + PQT
Sbjct: 180 KKRIIDNKDELVSNPQT 196
>gi|308804045|ref|XP_003079335.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 213
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 166/205 (80%), Gaps = 7/205 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A YD+L+KLLLIGDSGVGKSCLLLRFSD FTTSFITTIGIDFKI+T+EL GKR+KLQIW
Sbjct: 16 AHYDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIW 75
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTITTAYYRGAMGILLVYDV+DE SF N+R W+RNIEQHAS NVNKIL+GNK
Sbjct: 76 DTAGQERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNK 135
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ E KR + ++GQALADE+GI FFETSAK+++NV + F +IA DIK RL +
Sbjct: 136 CDVKEDKRVISKARGQALADEFGIPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSKGLGA 195
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P IN D+A A +R++CC
Sbjct: 196 PNA--INLGDRA-----ATKRASCC 213
>gi|218199254|gb|EEC81681.1| hypothetical protein OsI_25244 [Oryza sativa Indica Group]
gi|222636607|gb|EEE66739.1| hypothetical protein OsJ_23431 [Oryza sativa Japonica Group]
Length = 192
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 173/219 (78%), Gaps = 30/219 (13%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA P+R+R D+D+LIKLLLIGDSG IDFK+RT+ELD
Sbjct: 1 MAGAPSRSRGDFDHLIKLLLIGDSG-----------------------NIDFKVRTVELD 37
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 38 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 97
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK DMD +KR V T++GQ LADEYG+KFFETSAKTN NVE+VFF+IARDIKQR
Sbjct: 98 VNKILVGNKVDMD-TKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQR 156
Query: 181 LADT-DSRAEPQTIKIN--QPDQAGGAAQAAQRSACCGS 216
L +T + AEP TI+I+ +PDQ AA +++ SACC +
Sbjct: 157 LTETVAAAAEPPTIQISRQEPDQ---AAASSRWSACCNT 192
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 169/220 (76%), Gaps = 29/220 (13%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
R DYDYLIKLLLIGDSGVGKSCLLLRF++ SFT+SFITTIGIDFKI+ + +DGK +KLQI
Sbjct: 5 RQDYDYLIKLLLIGDSGVGKSCLLLRFAEDSFTSSFITTIGIDFKIKKVLIDGKWVKLQI 64
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT+AYYRGAMGILLVYDVTDE+SF NIRNW++NIEQHASDNV LVGN
Sbjct: 65 WDTAGQERFRTITSAYYRGAMGILLVYDVTDEASFTNIRNWMKNIEQHASDNV---LVGN 121
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K+DMDESKRAV S+GQALADE+ ++FFETSAK N NV+EVF S+ARDI RL DT
Sbjct: 122 KSDMDESKRAVAYSRGQALADEFRMQFFETSAKNNTNVDEVFQSVARDIMLRLKDT---- 177
Query: 189 EPQTIKINQPDQAGGA--------------AQAAQRSACC 214
QPD GA A A+ + CC
Sbjct: 178 --------QPDAGSGAGSGPSLRVGAGQRKAVASSKGGCC 209
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 164/204 (80%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTD+ SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+RL DT +P
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDTARTDQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
Q K++ Q G A CC
Sbjct: 185 QAAKVDVGGQ--GGDNAGMGGKCC 206
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/202 (71%), Positives = 164/202 (81%), Gaps = 2/202 (0%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
AA A +R +YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDG
Sbjct: 51 AAKMAGSR-NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDG 109
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
KR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ V
Sbjct: 110 KRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGV 169
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NKIL+GNK D D+ KR V T +GQALADE GI F E SAK N+NVE+ FFS+A DIK+R+
Sbjct: 170 NKILIGNKCDWDD-KRTVSTERGQALADELGIPFLEVSAKANINVEKAFFSLAADIKRRI 228
Query: 182 ADTDSRAEPQTIKINQPDQAGG 203
D+ E + + + Q GG
Sbjct: 229 VDSAKTEESKGVDVAQGSSVGG 250
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 165/211 (78%), Gaps = 16/211 (7%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT AYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ VNKIL+GNK D
Sbjct: 66 AGQERFRTITVAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVNKILIGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT------- 184
D+ KRAV T +GQ LADE G++F ETSAK N+NVEE FFS+ARDIK RL DT
Sbjct: 126 WDD-KRAVSTQQGQELADELGVRFLETSAKQNINVEEAFFSLARDIKARLLDTLPDQGAA 184
Query: 185 -DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+A ++K+ QP+ Q S CC
Sbjct: 185 APGQAATGSVKVGQPN-------TDQSSGCC 208
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 164/205 (80%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR-AE 189
D +E KRAV +GQALADE GI F E SAK N+N+EE FFS+A DIK+R+ DT S+ A
Sbjct: 126 DWEE-KRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSSKEAS 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ +N D +G + CC
Sbjct: 185 GGSSGVNVADNSGSGSGG----KCC 205
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 164/204 (80%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+N D++ G S CC
Sbjct: 185 SASGVNVGDKSEGGG-----SKCC 203
>gi|115471033|ref|NP_001059115.1| Os07g0195100 [Oryza sativa Japonica Group]
gi|113610651|dbj|BAF21029.1| Os07g0195100, partial [Oryza sativa Japonica Group]
Length = 273
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/194 (79%), Positives = 174/194 (89%), Gaps = 7/194 (3%)
Query: 26 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 85
+GKSCLLLRFSD +FTTSFITTIGIDFK+RT+ELDGKR+KLQIWDTAGQERFRTITTAYY
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 86 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQ 145
RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK DMD +KR V T++GQ
Sbjct: 144 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVDMD-TKRVVSTAQGQ 202
Query: 146 ALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT-DSRAEPQTIKIN--QPDQAG 202
LADEYG+KFFETSAKTN NVE+VFF+IARDIKQRL +T + AEP TI+I+ +PDQ
Sbjct: 203 KLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLTETVAAAAEPPTIQISRQEPDQ-- 260
Query: 203 GAAQAAQRSACCGS 216
AA +++ SACC +
Sbjct: 261 -AAASSRWSACCNT 273
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 164/204 (80%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+RL DT +
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDTARTDQS 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T K++ Q GG A CC
Sbjct: 185 ATPKVDVSGQDGG--NAGMGGKCC 206
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 164/204 (80%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+RL DT +
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDTARTDQT 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T K++ Q GG A CC
Sbjct: 185 ATPKVDVSGQDGG--NAGMGGKCC 206
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 165/206 (80%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQP 184
Query: 191 QTIKINQPD--QAGGAAQAAQRSACC 214
+N D +AGG S CC
Sbjct: 185 SASGVNVGDKSEAGG-------SKCC 203
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 165/206 (80%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQP 184
Query: 191 QT--IKINQPDQAGGAAQAAQRSACC 214
+ +N ++GG S CC
Sbjct: 185 AASGVNVNDKSESGG-------SKCC 203
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 161/204 (78%), Gaps = 7/204 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T KGQ LADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTEKGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+N +Q G + CC
Sbjct: 185 TASGVNVGEQGGAGGK------CC 202
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 164/206 (79%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI+LDGKRIKLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI+ W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D +E KR V T +GQALA+E GI F E SAK N+NVEE F +ARDIK+R+ D+ S +
Sbjct: 126 DWEE-KRVVSTERGQALANELGIPFMEVSAKANINVEEAFLLLARDIKKRIMDSSSGEKN 184
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+P + +N+ A G CC
Sbjct: 185 QPGVVNVNETSSAAGG-------KCC 203
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 162/204 (79%), Gaps = 7/204 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+N +Q+G + CC
Sbjct: 185 AASGVNVGEQSGAGGK------CC 202
>gi|449550450|gb|EMD41414.1| rab-type small GTP-binding protein [Ceriporiopsis subvermispora B]
Length = 209
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 166/213 (77%), Gaps = 7/213 (3%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV T +GQ LA+E GIKF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTTEQGQELANELGIKFMETSAKINEGVEEAFFTLARDIKTRLID 176
Query: 184 TDSRAEPQTIKINQPDQAGGAAQAAQRSA--CC 214
+ + A T + D A Q A ++A CC
Sbjct: 177 SQADAAGATPGTSGSDGAVKVNQPATQTAGGCC 209
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 165/207 (79%), Gaps = 9/207 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSR 187
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+RL D TD
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDTARTDQT 184
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
A P+ + + PD + A CC
Sbjct: 185 AAPK-VDVGGPD----SGNAGMGGKCC 206
>gi|392572121|gb|EIW65293.1| rab-type small GTP-binding protein [Trametes versicolor FP-101664
SS1]
Length = 208
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 170/219 (77%), Gaps = 20/219 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D E KRAV +G+ LA+E GIKF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWSE-KRAVTEEQGRELANELGIKFMETSAKINEGVEEAFFTLARDIKTRLID 176
Query: 184 T---DSRAEP-----QTIKINQPDQAGGAAQAAQRSACC 214
+ ++ A P ++K+NQP A+QAA CC
Sbjct: 177 SQADNAGAAPGQPGADSVKVNQP-----ASQAA--GGCC 208
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 161/204 (78%), Gaps = 7/204 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+N +Q G + CC
Sbjct: 185 AASGVNVGEQGGAGGK------CC 202
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 15/210 (7%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI++DGKRIKLQIWDT
Sbjct: 7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDT 66
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLVYDVTD+ SF NIRNW+ I Q+AS NVNKIL+GNK D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCD 126
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+D S+RAV T +GQ LADE+GIKFFETSAK+N N++E F SIA DI++RLA+++
Sbjct: 127 VDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEH----- 181
Query: 192 TIKINQPDQAGGA------AQAAQRSACCG 215
++ D A G+ AQ + +CC
Sbjct: 182 ----DRLDVANGSKFRVDEAQEQSKDSCCA 207
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 165/205 (80%), Gaps = 3/205 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+R+ DT +R++P
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAADIKKRIIDT-ARSDP 183
Query: 191 QTIKINQPDQAG-GAAQAAQRSACC 214
+ G A A CC
Sbjct: 184 APGQGQSGVNVGDSGANAGMGGKCC 208
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/174 (79%), Positives = 155/174 (89%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
D +E KRAV T +GQALADE GI F E SAK+N+NVE+ F+S+A DIK+R+ADT
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFYSLAGDIKKRIADT 178
>gi|395326128|gb|EJF58541.1| rab-type small GTP-binding protein [Dichomitus squalens LYAD-421
SS1]
Length = 210
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/220 (68%), Positives = 168/220 (76%), Gaps = 21/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D E KRAV +G+ LA+E GIKF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTE-KRAVTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 TDSRAE-----PQ----TIKINQPDQAGGAAQAAQRSACC 214
+ + + PQ +K+NQP A+Q + CC
Sbjct: 177 SQAESSGAAGGPQGTEGAVKVNQP-----ASQV--QGGCC 209
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
Length = 207
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 155/176 (88%), Gaps = 1/176 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
D +E KRAV T +GQALADE GI F E SAK+N+NVE+ FFS+A DIK+R+ DT +
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFFSLAGDIKKRIVDTQA 180
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/141 (97%), Positives = 139/141 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPT 141
VNKILVGNKADMDESKR PT
Sbjct: 121 VNKILVGNKADMDESKRVCPT 141
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 161/204 (78%), Gaps = 7/204 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE GI F E SAK+N+N+++ F+S+A DIK+RL D +P
Sbjct: 126 DWEE-KRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+N + +G + CC
Sbjct: 185 AASGVNVGESSGSGGK------CC 202
>gi|169843608|ref|XP_001828531.1| rab-type small GTP-binding protein [Coprinopsis cinerea
okayama7#130]
gi|116510391|gb|EAU93286.1| rab-type small GTP-binding protein [Coprinopsis cinerea
okayama7#130]
Length = 208
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/218 (68%), Positives = 168/218 (77%), Gaps = 19/218 (8%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E GIKF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 T--DSRAEP-----QTIKINQPDQAGGAAQAAQRSACC 214
+ D+ P ++K+NQP AQ+ Q CC
Sbjct: 177 SQADAAGTPGGPATDSVKVNQP-----TAQSQQ--GCC 207
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 163/208 (78%), Gaps = 4/208 (1%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A +YD LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQ
Sbjct: 2 ANRNYDVLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ VNKIL+G
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNKILIG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D +E KRAV T +GQALADE GI F E SAK N+N+++ F+S+A DIK+R DT
Sbjct: 122 NKCDWEE-KRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTQKD 180
Query: 188 AE-PQTIKINQPDQAGGAAQAAQRSACC 214
+ P ++ +N Q G + CC
Sbjct: 181 FQNPGSVNVNAGAQ--GNSAGGMGGKCC 206
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/177 (77%), Positives = 153/177 (86%), Gaps = 1/177 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
D +E KRAV +GQALADE GI F E SAK N+N+EE FFS+A DIK+R+ DT +
Sbjct: 126 DWEE-KRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSGK 181
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 161/210 (76%), Gaps = 12/210 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI+LDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFANVEQHASEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQALADE GI F E SAK N+N+E+ F+S+A D+K+RL D+
Sbjct: 126 DWEE-KRVVSTEQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDSSKETGA 184
Query: 191 QTIKINQPDQAGGAAQAAQRSA------CC 214
T +Q+ G AQ CC
Sbjct: 185 AT-----GNQSAGGVNVAQNQGAGVGGKCC 209
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/181 (76%), Positives = 157/181 (86%), Gaps = 2/181 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE GI F E SAK+N+NVE+ FFS+A DIK+R+ DT +RAE
Sbjct: 126 DWEE-KRVVSTERGQQLADELGIPFMEVSAKSNINVEKAFFSLATDIKKRIMDT-ARAEE 183
Query: 191 Q 191
+
Sbjct: 184 K 184
>gi|390603944|gb|EIN13335.1| rab-type small GTP-binding protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 210
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 164/220 (74%), Gaps = 20/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK D + KRAV +G+ALADE GIKF ETSAK N VEE FF +ARDIK RL D
Sbjct: 118 ILIGNKCDWSD-KRAVTEEQGKALADELGIKFMETSAKVNEGVEEAFFLLARDIKTRLID 176
Query: 184 T---------DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ + ++++NQP QA A CC
Sbjct: 177 SQADAAGAQGGASGADGSVRVNQPSQATTAG------GCC 210
>gi|170100328|ref|XP_001881382.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
gi|164644061|gb|EDR08312.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
Length = 205
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 169/215 (78%), Gaps = 16/215 (7%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHNNIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E GI+F ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEQGRELANELGIRFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 TD----SRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ + A ++++NQP AAQ++Q CC
Sbjct: 177 SQADAAAPAATDSVRVNQP-----AAQSSQ--GCC 204
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 162/204 (79%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+R+ DT +
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLAGDIKKRIVDTQQPQQG 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++ Q A + CC
Sbjct: 185 NQQGVSVGGQQSAAGGLGKN--CC 206
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 163/205 (79%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDVLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE- 189
D +E KRAV T +GQALADE GI F E SAK N+N+++ F+S+A DIK+R DT +
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTAKEYQN 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P ++ + G +A++ CC
Sbjct: 185 PSSVNV------GANTEASRTGNCC 203
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 155/179 (86%), Gaps = 1/179 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D +E KRAV T +GQALADE GI F E SAK+N+NV++ F+S+A DIK+R+ DT A
Sbjct: 126 DWEE-KRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLATDIKKRIVDTQQPAH 183
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 168/218 (77%), Gaps = 6/218 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA P R DYD LIKLLL+GDSGVGKSCLLLRF+D FT+SFITTIGIDFKI+ +++D
Sbjct: 1 MARIPGRP--DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVD 58
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNW+RNIEQHASDN
Sbjct: 59 GKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDN 118
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK D+ E KR V ++GQALADE+G +F+ETSAK N++VEE F ++A+D+ R
Sbjct: 119 VNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLAR 178
Query: 181 LADTDSRAEPQTIKINQPDQ----AGGAAQAAQRSACC 214
+ + + + Q G+ AQ +CC
Sbjct: 179 MEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/189 (73%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIELDGKRIKLQ
Sbjct: 2 ATKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTITTAYYRGAMGILL+YDVTDE SF NIR W N+EQHAS+NV KIL+G
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRTWFSNVEQHASENVFKILIG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D +E +R V +GQALA+E GIKF E SAKTN+NV+E FF++AR+IK++ D +
Sbjct: 122 NKCDCEE-QRQVTYEQGQALAEELGIKFLEASAKTNVNVDEAFFTLAREIKKQKIDAEQE 180
Query: 188 AEPQTIKIN 196
+ Q I+
Sbjct: 181 SSAQASNID 189
>gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578226|gb|ABO96291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 151/167 (90%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L+KLLLIGDSGVGKSCLLLRFSD FTTSFITTIGIDFKI+T+E+DGKR+KLQIWDT
Sbjct: 3 YDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVEIDGKRVKLQIWDT 62
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLVYDV+DE SF N+R W+RNIEQHAS +VNKIL+GNK D
Sbjct: 63 AGQERFRTITTAYYRGAMGILLVYDVSDEKSFENVRGWMRNIEQHASSSVNKILIGNKCD 122
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 178
+ E KRA+ ++GQALADE+GI FFETSAK ++NVE+ F +IA DIK
Sbjct: 123 VSEEKRAITKARGQALADEFGIPFFETSAKASVNVEDAFMTIAGDIK 169
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 164/206 (79%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W +N+EQHA++ VN+IL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNRILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D+ +
Sbjct: 126 DW-EDKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDSSKNDQA 184
Query: 191 QTIKINQPDQ--AGGAAQAAQRSACC 214
+N D+ AGG S CC
Sbjct: 185 TGTGVNVGDKTDAGG-------SKCC 203
>gi|413932609|gb|AFW67160.1| hypothetical protein ZEAMMB73_060765 [Zea mays]
Length = 180
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/138 (98%), Positives = 137/138 (99%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRA 138
VNKILVGNKADMDESKR
Sbjct: 121 VNKILVGNKADMDESKRV 138
>gi|321254029|ref|XP_003192938.1| rab/GTPase [Cryptococcus gattii WM276]
gi|317459407|gb|ADV21151.1| Rab/GTPase, putative [Cryptococcus gattii WM276]
Length = 211
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 166/219 (75%), Gaps = 13/219 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+ P A YD+LIKLLLIGDSGVGKSCLLLRF + S+T SFITTIGIDFKIRTIELD
Sbjct: 1 MSGP---AGQHYDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELD 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W+ NIEQHAS
Sbjct: 58 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIEQHASPG 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKIL+GNK D +E KR+V +G+ALADE+G++F ETSAK N VEE FF++ARDIK R
Sbjct: 118 VNKILIGNKCDWEE-KRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLARDIKTR 176
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRS-----ACC 214
L D+ +PQ Q G ++S CC
Sbjct: 177 LIDS----QPQEAAPVQLGADRGGVNVNKQSDSSSGGCC 211
>gi|302673708|ref|XP_003026540.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
gi|300100223|gb|EFI91637.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
Length = 209
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 165/213 (77%), Gaps = 8/213 (3%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + K+AV +G+ LA+E GIKF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KKAVTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 TDSRAEPQTIKINQPD--QAGGAAQAAQRSACC 214
+ + A + N PD + G A A + CC
Sbjct: 177 SQTDAATASTTQN-PDAVRIGQGANATAGNGCC 208
>gi|58265066|ref|XP_569689.1| Rab/GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134109357|ref|XP_776793.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259473|gb|EAL22146.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225921|gb|AAW42382.1| Rab/GTPase, putative [Cryptococcus neoformans var. neoformans
JEC21]
gi|304569874|gb|ADM45310.1| Sav1 [Cryptococcus neoformans]
gi|405119103|gb|AFR93876.1| rab/GTPase [Cryptococcus neoformans var. grubii H99]
Length = 211
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 163/212 (76%), Gaps = 16/212 (7%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+ P A YD+LIKLLLIGDSGVGKSCLLLRF + S+T SFITTIGIDFKIRTIELD
Sbjct: 1 MSGP---AGQHYDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELD 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W+ NIEQHAS
Sbjct: 58 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIEQHASPG 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKIL+GNK D +E KR+V +G+ALADE+G++F ETSAK N VEE FF++ARDIK R
Sbjct: 118 VNKILIGNKCDWEE-KRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLARDIKTR 176
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSA 212
L D+ QP +A A R+
Sbjct: 177 LIDS------------QPQEAAPVQLGADRNG 196
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 166/213 (77%), Gaps = 12/213 (5%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
PA + +YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+
Sbjct: 2 PAPSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRV 61
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W +N+EQHA++ VNKI
Sbjct: 62 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIRTWFQNVEQHATEGVNKI 121
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD- 183
L+GNK D E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D
Sbjct: 122 LIGNKCDW-EDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDN 180
Query: 184 --TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
TD+ +K+ + GG S CC
Sbjct: 181 QKTDA-GVSSGVKVGEQSDNGG-------SKCC 205
>gi|353242246|emb|CCA73906.1| probable SEC4-like Rab/GTPase [Piriformospora indica DSM 11827]
Length = 208
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 161/203 (79%), Gaps = 1/203 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 7 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 66
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTDE SFNNIR W NIEQHAS+ VNKIL+GNK+D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLIYDVTDEKSFNNIRTWHANIEQHASEGVNKILIGNKSD 126
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ KR V +G+ALADE+GIKF ETSAK N VE+ FF++ARDIK RL D++ A
Sbjct: 127 WSD-KRQVTPEQGRALADEFGIKFMETSAKVNDGVEDAFFTLARDIKTRLIDSNPNAGTS 185
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
+Q + A + + CC
Sbjct: 186 GQSKSQDNSIKVGAPPSANAGCC 208
>gi|392596937|gb|EIW86259.1| rab-type small GTP-binding protein [Coniophora puteana RWD-64-598
SS2]
Length = 208
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 166/218 (76%), Gaps = 19/218 (8%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFKNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E G+KF ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEEGRELANELGVKFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 TDS-RAEPQ------TIKINQPDQAGGAAQAAQRSACC 214
+ + A P ++K+NQP AA +CC
Sbjct: 177 SQADSALPSGAGNADSVKVNQP-------AAASSGSCC 207
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 168/210 (80%), Gaps = 15/210 (7%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI++DGKRIKLQIWDT
Sbjct: 7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDT 66
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I Q+AS NVNKIL+GNK D
Sbjct: 67 AGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCD 126
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+D S+RAV T +GQ LADE+GIKFFETSAK+N N++E F SIA DI++RLA+++
Sbjct: 127 VDPSERAVTTKQGQDLADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLAESEH----- 181
Query: 192 TIKINQPDQAGGA------AQAAQRSACCG 215
++ D A G+ +Q + CC
Sbjct: 182 ----DRLDVANGSKFRVDESQDQTKDGCCA 207
>gi|389750829|gb|EIM91902.1| rab-type small GTP-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 210
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/220 (66%), Positives = 166/220 (75%), Gaps = 21/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + K+AV +G+ LA+E GI+F ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KKAVTEEQGRELAEELGIRFMETSAKINEGVEEAFFTLARDIKARLID 176
Query: 184 T--DSRAEP-------QTIKINQPDQAGGAAQAAQRSACC 214
+ D+ P ++K+NQP A S CC
Sbjct: 177 SQADAAGAPGGPSAADGSVKVNQPATAAA-------SGCC 209
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 163/214 (76%), Gaps = 8/214 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M P R +YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELD
Sbjct: 1 MTMPNNR---NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELD 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W +N+EQHA++
Sbjct: 58 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEG 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKIL+GNK D E KR + +GQALADE GI F E SAK+N+N+++ F+S+A DIK+R
Sbjct: 118 VNKILIGNKCDW-EDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKR 176
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
L D + +N D+ G S CC
Sbjct: 177 LIDNSKNETGSSGGVNVGDKTEGGMG----SKCC 206
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 160/204 (78%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE GI F E SAKTN N+++ F+S+A DIK+R+ DT ++P
Sbjct: 126 DWEE-KRVVSTERGQQLADELGIPFLEVSAKTNTNIDKAFYSLAADIKKRIIDT---SKP 181
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
Q G + + CC
Sbjct: 182 DQAAAGQAVNVGDKSGSESGVKCC 205
>gi|403414723|emb|CCM01423.1| predicted protein [Fibroporia radiculosa]
Length = 209
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 168/220 (76%), Gaps = 21/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LADE GIKF ETSAK N VE+ FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEQGRELADELGIKFMETSAKVNEGVEDAFFTLARDIKARLID 176
Query: 184 TDSRAE--PQ-------TIKINQPDQAGGAAQAAQRSACC 214
+ A P +K++QP A+Q+ +S CC
Sbjct: 177 SQPEATGAPSGAAGTDGAVKVSQP-----ASQS--QSGCC 209
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 152/174 (87%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHASEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
D +E KRAV T +GQ LA+E I F E SAK+N+NVE+ FFS+A DIK++L DT
Sbjct: 126 DWEE-KRAVSTEQGQQLANELNIPFMEVSAKSNINVEKAFFSLASDIKKKLLDT 178
>gi|409082989|gb|EKM83346.1| hypothetical protein AGABI1DRAFT_110016 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201961|gb|EKV51884.1| rab-type small GTP-binding protein [Agaricus bisporus var. bisporus
H97]
Length = 209
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/221 (66%), Positives = 167/221 (75%), Gaps = 21/221 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E G++F ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEQGRQLAEELGLRFMETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 T------DSRAEPQ--TIKINQPDQAGGAAQAAQRSACCGS 216
+ S + P ++++NQP A Q S C S
Sbjct: 177 SQADAAGSSTSAPTDGSVRVNQP--------ANQTSPTCCS 209
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 156/192 (81%), Gaps = 9/192 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D E KR V T +GQ LADE GI F E SAK+N+NVE+ F+S+A DIK+R+ DT
Sbjct: 126 DW-EDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADIKKRIVDTS----- 179
Query: 191 QTIKINQPDQAG 202
KI+Q Q G
Sbjct: 180 ---KIDQAAQQG 188
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LA+E GI F E SAK N+NVE+ F+++A DIK+ + T S +A
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+ GA Q CC
Sbjct: 185 SQGVTIDHQ----GAGQGNLGGKCC 205
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 159/204 (77%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D E +R V T +GQ LADE GI F E SAK+N+NVE+ F+S+A DIK+R+ DT
Sbjct: 126 DW-EDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDTAKTDAS 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ ++ Q G+ CC
Sbjct: 185 ASQGVDVGAQGSGSG-----GKCC 203
>gi|392579564|gb|EIW72691.1| hypothetical protein TREMEDRAFT_58860 [Tremella mesenterica DSM
1558]
Length = 208
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 160/201 (79%), Gaps = 13/201 (6%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGK+IKLQIW
Sbjct: 4 AHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKKIKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTITTAYYRGAMGILLVYDVTDE SF+NIR W NI+QHAS VNKIL+GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFSNIRTWHANIDQHASPGVNKILIGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D D+ KRAV +G+ALADE+G++F ETSAK N VEE FF++ARDIK RL D+
Sbjct: 124 CDWDD-KRAVSLEQGKALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLIDS----- 177
Query: 190 PQTIKINQPDQAGGAAQAAQR 210
QP+ A + AA R
Sbjct: 178 -------QPEAAAPVSLAADR 191
>gi|61676643|gb|AAX51845.1| Rab-type small GTP-binding protein [Paxillus involutus]
Length = 210
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/220 (67%), Positives = 166/220 (75%), Gaps = 21/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHASD VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASDGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E GI+F ETSAK N VE+ FF++ARD K RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEDQGRELANELGIRFMETSAKVNDGVEDAFFTLARDCKTRLID 176
Query: 184 T--DSRAEP-------QTIKINQPDQAGGAAQAAQRSACC 214
+ D+ P ++K+NQP QAA CC
Sbjct: 177 SQADATGSPGSAGNADGSVKVNQP-----TTQAA--GGCC 209
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 163/205 (79%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+NVE+ F+++A DIK+ + T S +A
Sbjct: 126 DWEE-KRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+ Q GA + CC
Sbjct: 185 SQGVTIDH--QGSGAGNLGGK--CC 205
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 160/203 (78%), Gaps = 8/203 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRFS+ FT+SFITTIGIDFKIRT+ELDGKR+KLQIWDT
Sbjct: 8 YDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT AYYRGA GILL YDVTDE SFNN+RNW+RNIEQHASD V+K+LVGNK+D
Sbjct: 68 AGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSKVLVGNKSD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+E KR + T +G+ALA E+GI FFETSAK N NV + FF+IAR IK L T
Sbjct: 128 AEE-KRVISTEQGEALAKEFGIPFFETSAKANTNVNDAFFAIARIIKAGL-KTSGDGGGA 185
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
+K+ P +A ++CC
Sbjct: 186 GVKLGPP------PKAKSGTSCC 202
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 160/180 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1305 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1364
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1365 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1424
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA DI++RLA++D
Sbjct: 1425 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1484
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 160/180 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1276 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1335
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1336 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1395
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA DI++RLA++D
Sbjct: 1396 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1455
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 160/180 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1333 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1392
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1393 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1452
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA DI++RLA++D
Sbjct: 1453 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1512
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 157/192 (81%), Gaps = 12/192 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 7 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 67 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR V T +GQ LADE I F E SAKTN N+++ F+S+A DIK+R+ DT
Sbjct: 127 DWEE-KRVVSTERGQQLADELNIPFLEVSAKTNNNIDKAFYSLAADIKKRIIDT------ 179
Query: 191 QTIKINQPDQAG 202
++PDQAG
Sbjct: 180 -----SKPDQAG 186
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 160/180 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1332 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1391
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1392 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1451
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA DI++RLA++D
Sbjct: 1452 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1511
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 160/180 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1303 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1362
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1363 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1422
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA DI++RLA++D
Sbjct: 1423 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1482
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D
Sbjct: 126 DW-EDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQKTDVG 184
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
+ +N G ++AA C
Sbjct: 185 TSSGVN----VGEKSEAASGKCC 203
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+NV++ F+S+A +IK+ + T S +A
Sbjct: 126 DWEE-KRAVTTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I DQ + CC
Sbjct: 185 TQGVNI---DQHNAGSNGNLGGKCC 206
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 159/204 (77%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF+NIR W +N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIRTWFQNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D E KR V T +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D
Sbjct: 126 DW-EDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQKTDTG 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ +N G A CC
Sbjct: 185 TSSGVNV-----GEKNDAASGKCC 203
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 163/206 (79%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D +E KRAV T +GQ LA+E GI F E SAK N+NVE+ F+++A DIK ++ DT+ +A
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIK-KVMDTNKSEQA 183
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+ GA Q CC
Sbjct: 184 GSQGVTIDHQ----GAGQGNLGGKCC 205
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 164/209 (78%), Gaps = 13/209 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLV+DVTD+ SF N+R W NIEQHAS+ V+KIL+GNK+D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAE 189
+E KRAV T +G+ LA E GI + ETSAK+N NVEE FF++AR++K RL DT ++A
Sbjct: 126 WEE-KRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQAS 184
Query: 190 P----QTIKINQPDQAGGAAQAAQRSACC 214
P + +N + GGA CC
Sbjct: 185 PAAASANVNVNSAPKTGGAG------GCC 207
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 150/174 (86%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
D E KR V T +GQ LADE GI F E SAK+N+NVE+ F+S+A DIK+R+ DT
Sbjct: 126 DW-EDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADIKKRIVDT 178
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 164/205 (80%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+NV++ F+S+A +IK+ + T S +A
Sbjct: 126 DWEE-KRAVSTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+Q + AG + CC
Sbjct: 185 GQGVNIDQ-NNAGSNGNLGGK--CC 206
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+NVE+ F+++A DIK+ + T S +A
Sbjct: 126 DWEE-KRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+ Q G + CC
Sbjct: 185 SQGVTIDH--QGSGVGNLGGK--CC 205
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 161/206 (78%), Gaps = 7/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+++A +IK+ + DT +P
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGM-DTSKSEQP 183
Query: 191 --QTIKINQPDQAGGAAQAAQRSACC 214
Q + I DQ G + CC
Sbjct: 184 GSQGVSI---DQQGPGPNGSTGGKCC 206
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N+EQHAS+NV KIL+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
E +R V +GQALADE G+KF E SAKTN+NV+E FF++AR+IK++ D ++ Q
Sbjct: 126 C-EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
>gi|358057810|dbj|GAA96312.1| hypothetical protein E5Q_02978 [Mixia osmundae IAM 14324]
Length = 264
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/206 (66%), Positives = 160/206 (77%), Gaps = 5/206 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Y L+K+LLIGDSGVGKSCLLLRF D ++T SFITT+GIDFKIRTIELDGKRIKLQIWDT
Sbjct: 41 YHILLKMLLIGDSGVGKSCLLLRFCDDAWTPSFITTVGIDFKIRTIELDGKRIKLQIWDT 100
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK+L+GNK D
Sbjct: 101 AGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKLLIGNKCD 160
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
E K+ + +G+ LADE G+ + ETSAKTN+NVEE FF++AR++K RL DT A P
Sbjct: 161 WTE-KKVITEQQGRELADELGVGYLETSAKTNINVEEAFFTLAREVKNRLVDT---AGPD 216
Query: 192 TIK-INQPDQAGGAAQAAQRSACCGS 216
N+P + + ++ CC S
Sbjct: 217 AAAGANRPGAVNFNSGPSAKAGCCHS 242
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 164/209 (78%), Gaps = 12/209 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLV+DVTD+ SF N+R W NIEQHAS+ V+KIL+GNK+D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAE 189
+E KRAV T +G+ LA E GI + ETSAK+N NVEE FF++AR++K RL DT ++A
Sbjct: 126 WEE-KRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQAS 184
Query: 190 PQ----TIKINQPDQAGGAAQAAQRSACC 214
P + +N ++G A CC
Sbjct: 185 PAAAAGNVNVNSAPKSGAAG-----GGCC 208
>gi|328855882|gb|EGG05006.1| hypothetical protein MELLADRAFT_37102 [Melampsora larici-populina
98AG31]
Length = 209
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 160/210 (76%), Gaps = 14/210 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 7 YDFLIKLLLIGDSGVGKSCLLLRFCDDAYTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 66
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLVYDVTD+ SF NIR W NI+QHAS+ VNKIL+GNK D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLVYDVTDDKSFTNIRTWHSNIDQHASEGVNKILLGNKCD 126
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT------- 184
+ K+ + +G+ LA E GI F ETSAKTN NVEE FFS+ARDIK RL DT
Sbjct: 127 STD-KKVISEEQGRELATELGISFMETSAKTNTNVEEAFFSLARDIKTRLIDTAGPDQSS 185
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
S +I +NQ AGG ++ CC
Sbjct: 186 GSNPNGSSITVNQSGTAGG------KTGCC 209
>gi|346976474|gb|EGY19926.1| GTP-binding protein SAS1 [Verticillium dahliae VdLs.17]
Length = 208
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/173 (76%), Positives = 150/173 (86%), Gaps = 1/173 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
D E KR V T +GQ LADE GI F E SAK+N+N+++ F+S+A DIK+RL D
Sbjct: 126 DW-EDKRVVSTEQGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLID 177
>gi|290999034|ref|XP_002682085.1| rab family small GTPase [Naegleria gruberi]
gi|284095711|gb|EFC49341.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/236 (62%), Positives = 176/236 (74%), Gaps = 24/236 (10%)
Query: 2 AAPPARA-RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
PP+R+ A YDYL KLLLIGDSGVGKSCLLLRFSD +FTT+FITTIGIDFKIRTIELD
Sbjct: 3 VPPPSRSGNAQYDYLCKLLLIGDSGVGKSCLLLRFSDDTFTTNFITTIGIDFKIRTIELD 62
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGI+L YDVTDE SF NIRNW++NIE+HA+DN
Sbjct: 63 GKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLTYDVTDEQSFLNIRNWMKNIEEHAADN 122
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK D+ E K+ V T +GQ+LA YGI F ETSAK N+NVEE FF+IAR+IK R
Sbjct: 123 VNKMLIGNKCDLIE-KKIVETERGQSLAKSYGIPFMETSAKNNINVEEAFFTIAREIKSR 181
Query: 181 LADTDSRAEP-----------QTIKINQP----------DQAGGAAQAAQRSACCG 215
L D+ EP ++ + +P DQ + ++ +CCG
Sbjct: 182 LIDS-GEVEPIVEDSSPSNTKKSTEEEKPKTSNSGTVRIDQNQNTSNEKKKKSCCG 236
>gi|393248191|gb|EJD55698.1| GTP-binding protein, SEC4 [Auricularia delicata TFB-10046 SS5]
Length = 209
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 162/219 (73%), Gaps = 20/219 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPQH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D E K+ V +G+ALA E GI+F ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTE-KKVVSEDQGRALAQELGIRFLETSAKVNEGVEEAFFTLARDIKTRLID 176
Query: 184 TDSR--------AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ A +I QP AAQ A CC
Sbjct: 177 SQPENANAGAGAAGDASINPKQP-----AAQGA--GGCC 208
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 162/209 (77%), Gaps = 13/209 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLV+DVTD+ SF N+R W NIEQHAS+ V+KIL+GNK+D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAE 189
+E KRAV T +G+ LA E GI + ETSAK+N NVEE FF +AR++K RL DT ++A
Sbjct: 126 WEE-KRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTAAVTQAS 184
Query: 190 PQ----TIKINQPDQAGGAAQAAQRSACC 214
P + +N + G A CC
Sbjct: 185 PAAATGNVNVNSAPKTGAAG------GCC 207
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+S+A DIK+ + DT +
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASDIKKGM-DTSKTEQS 183
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ +N DQ G CC
Sbjct: 184 GSQGVN-IDQQGSGPNGNSGGKCC 206
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 159/205 (77%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LA+E GI F E SAK N+N+E+ F+ +A DIK+ + + S +
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQVG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I DQ G + CC
Sbjct: 185 SQGVSI---DQQGSGLNGSAGGKCC 206
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 154/186 (82%), Gaps = 1/186 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KR + T +GQ LADE GI F E SAK+ +N+++ F+++A DIK R+ DT +
Sbjct: 126 DWEE-KRVISTERGQQLADELGIPFLEVSAKSGINIDKAFYNLASDIKTRIVDTAKTEQT 184
Query: 191 QTIKIN 196
+ +N
Sbjct: 185 ASAGVN 190
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 158/203 (77%), Gaps = 1/203 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILLV+DVTD+ SF N+R W NIEQHAS+ V+KIL+GNK+D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+E KRAV T +G+ LA E GI + ETSAK+N NVEE FF++AR++K RL DT + +
Sbjct: 126 WEE-KRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVTQAS 184
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
A ++ CC
Sbjct: 185 PAAAAGNVNVNSAPKSGATGGCC 207
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIEL+GKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LA+E GI F E SAK N+NV++ F+++A +IK ++ DT S+AE
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINVDKAFYTLASEIK-KVMDT-SKAEQ 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
DQ G+ A + CC
Sbjct: 183 SASHNVSIDQGSGSG-AGLANKCC 205
>gi|403159464|ref|XP_003320075.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168105|gb|EFP75656.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 212
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 150/178 (84%), Gaps = 1/178 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKLQ
Sbjct: 3 ANPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAYTPSFITTIGIDFKIRTIELDGKRIKLQ 62
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNW NI+QHAS+ VNKIL+G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFENIRNWHSNIDQHASEGVNKILIG 122
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
NK+D E K+ + ++G+ LA E GI F ETSAK N NVEE FFS+ARDIK RL D +
Sbjct: 123 NKSDSVE-KKIIQENQGRELAAELGISFMETSAKANTNVEEAFFSLARDIKTRLIDNN 179
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 161/203 (79%), Gaps = 2/203 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+++A DIK+ + D+ +
Sbjct: 126 DWEE-KRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASDIKKGM-DSSKPEQT 183
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
+ ++ +QA G + A C
Sbjct: 184 GSQGVSIDNQASGLSGNAGGKCC 206
>gi|336365713|gb|EGN94062.1| hypothetical protein SERLA73DRAFT_77997 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378321|gb|EGO19479.1| hypothetical protein SERLADRAFT_401850 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/220 (65%), Positives = 163/220 (74%), Gaps = 21/220 (9%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP YD+LIKLLLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 2 PPPH----YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W NIEQHAS+ VNK
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNK 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
IL+GNK+D + KRAV +G+ LA+E GI+F ETSAK N VEE FF++ARDIK RL D
Sbjct: 118 ILIGNKSDWTD-KRAVTEEQGRELAEELGIRFMETSAKVNDGVEEAFFTLARDIKTRLID 176
Query: 184 TDSRAEPQ---------TIKINQPDQAGGAAQAAQRSACC 214
T + ++K+NQP + CC
Sbjct: 177 TQADTAAAAGGSPSADGSVKVNQP-------STQTTTGCC 209
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
R D+D LIKLLL+GDSGVGKSCLLLRF+D FT+SFITTIGIDFKI+ ++++GK +KLQI
Sbjct: 6 RGDFDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQI 65
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT+AYYRGA GI+LVYD+TDE SFNN+RNW+RNIEQHASDNVNKILVGN
Sbjct: 66 WDTAGQERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHASDNVNKILVGN 125
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
K D+ E KR V ++G+ALADEYG +FFETSAK N+ VEE F S+A+D+ R+
Sbjct: 126 KLDLSE-KRVVSEARGRALADEYGFRFFETSAKDNVCVEEAFLSVAKDVLHRM 177
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 158/205 (77%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LA+E GI F E SAK N+N+E+ F+ +A DIK+ + + S +
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQVG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I DQ G CC
Sbjct: 185 SQGVSI---DQQGSGLNGNAGGKCC 206
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++E KR V KG+ LA EYGIKF ETSAK N+NVE FF++ARDIK +R+ +
Sbjct: 125 VNE-KRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI Q Q
Sbjct: 184 GSNQGVKITQDQQ 196
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 162/205 (79%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LA+E GI F E SAK N+NVE+ F+++A DIK+ + T S +A
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I D GG + CC
Sbjct: 185 SQGVII---DHQGGGVGSNLGGKCC 206
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 163/205 (79%), Gaps = 5/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LA+E GI F E SAK N+NVE+ F+++A DIK+ + T S +A
Sbjct: 126 DWEE-KRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTKSEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I D GG A + CC
Sbjct: 185 SQGVII---DHQGGGAGSNLGGKCC 206
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 62
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNKCD 122
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++E KR V KG+ LA EYGIKF ETSAK N+NVE FF++ARDIK +R+ +
Sbjct: 123 VNE-KRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNSPQ 181
Query: 188 AEPQTIKINQPDQ 200
Q +KI Q Q
Sbjct: 182 GSNQGVKITQDQQ 194
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 155/186 (83%), Gaps = 2/186 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+++A +IK+ + + S +A
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQAS 184
Query: 190 PQTIKI 195
P T I
Sbjct: 185 PATFDI 190
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 158/203 (77%), Gaps = 7/203 (3%)
Query: 14 YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Y+IKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWDTAG
Sbjct: 298 YVIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAG 357
Query: 74 QERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMD 133
QERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK D +
Sbjct: 358 QERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKCDWE 417
Query: 134 ESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP--Q 191
E KRAV T +GQ LADE GI F E SAK N+N+E+ F+++A +IK+ + DT +P Q
Sbjct: 418 E-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGM-DTSKSEQPGSQ 475
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
+ I DQ G + CC
Sbjct: 476 GVSI---DQQGPGPNGSTGGKCC 495
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 2/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+++A IK+ + + S +A
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASAIKKGMDTSKSEQAG 184
Query: 190 PQTIKIN 196
PQ + I+
Sbjct: 185 PQGVNID 191
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%), Gaps = 3/203 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI+L GKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLGGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LADE GI F E SAK N+NV++ F+++A +IK ++ DT S+AE
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIK-KVMDT-SKAEQ 182
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
DQ G+ C
Sbjct: 183 SASHNVSIDQGTGSGTGLANKCC 205
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI LDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYR AMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV +GQ LA+E GI F E SAK N+NV++ F+S+A +IK+ + D +
Sbjct: 126 DGEE-KRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDM-DVSKAEQA 183
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
+ +N +Q GGA + +S C
Sbjct: 184 GSQGVNIDNQNGGAGGSLGKSCC 206
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 158/204 (77%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV T +GQ LADE GI F E SAK N+N+E+ F+S+A IK+ + DT +
Sbjct: 126 DWEE-KRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASAIKKGM-DTSKSEQV 183
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ +N D G + CC
Sbjct: 184 GSQGVN-IDHHGSGTSGSTGGKCC 206
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+E KR V KG+ LA +YGIKF ETSAK+++NVEE FF++ARDI +L
Sbjct: 125 MNE-KRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKL 173
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI LDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYR AMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D +E KRAV +GQ LA+E GI F E SAK N+NV++ F+S+A +IK+ + D +
Sbjct: 126 DGEE-KRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDM-DVFKAEQA 183
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
+ +N +Q GGA + +S C
Sbjct: 184 GSQGVNIDNQNGGAGSSLGKSCC 206
>gi|240281309|gb|EER44812.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 204
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/200 (68%), Positives = 157/200 (78%), Gaps = 6/200 (3%)
Query: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
IKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQE 69
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHAS+ V+K+L+GNK D +E
Sbjct: 70 RFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKCDWEE- 128
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAEPQTIK 194
KRAV T +GQ LADE GI F E SAK N+NVE+ F+++A DIK+ + T S +A Q +
Sbjct: 129 KRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAGSQGVT 188
Query: 195 INQPDQAGGAAQAAQRSACC 214
I+ Q G + CC
Sbjct: 189 IDH--QGSGVGNLGGK--CC 204
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 160/204 (78%), Gaps = 4/204 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIE+DGK+IKLQIWDT
Sbjct: 19 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWDT 78
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V+++++GNK D
Sbjct: 79 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCD 138
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E +R V +G+ LA EYG KF ETSAK N+NVEE FF++ARDIK + + Q
Sbjct: 139 VEE-RRQVSRERGEQLAIEYGTKFLETSAKANINVEEAFFTLARDIKLKTERASHQCTTQ 197
Query: 192 T---IKINQPDQAGGAAQAAQRSA 212
I + QP + + + R +
Sbjct: 198 NTGRISMEQPQKKSASIFSGWRCS 221
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/167 (74%), Positives = 148/167 (88%), Gaps = 1/167 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V+++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 178
++E +R V +G+ LA EYG KF ETSAK N+NVEE FF++ARDIK
Sbjct: 125 IEE-RRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIK 170
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 160/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++LA +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLAGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 159/192 (82%), Gaps = 7/192 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNWIRNIE+HAS +V+K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIEEHASQDVDKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M++ KR V KG+ALA E+GIKF ETSAK ++NVE+ FF++ARDIK ++ D + E
Sbjct: 125 MND-KRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKM---DRKLESS 180
Query: 192 TIKINQPDQAGG 203
Q AGG
Sbjct: 181 NA---QAKNAGG 189
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 157/201 (78%), Gaps = 10/201 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNIE+HAS +V ++L+GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHASSDVERMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
MD KR V +G+ LA +Y IKF ETSAK LNVEE F ++ARDI RL+ +
Sbjct: 125 MD--KRQVAKERGEKLAIDYSIKFLETSAKAGLNVEEAFLTLARDIMGRLS--------R 174
Query: 192 TIKINQPDQAGGAAQAAQRSA 212
+ N P GG + +R +
Sbjct: 175 KMNENNPSAGGGPVKITERRS 195
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 155/195 (79%), Gaps = 1/195 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E +R V +G+ LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 125 IEE-RREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGS 183
Query: 192 TIKINQPDQAGGAAQ 206
+ + G Q
Sbjct: 184 VSNTGRVNVGGSGTQ 198
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 155/195 (79%), Gaps = 1/195 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 63
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 64 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 123
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E +R V +G+ LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 124 IEE-RREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGS 182
Query: 192 TIKINQPDQAGGAAQ 206
+ + G Q
Sbjct: 183 VSNTGRVNVGGSGTQ 197
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 150/172 (87%), Gaps = 1/172 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIEL+GK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
M+E +R V +G+ LA +YGIKF ETSAKT++NVEE FF++ARDI RL +
Sbjct: 125 MNE-RRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDIMARLMN 175
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++E +R V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VNE-RRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GNNQGVKIT-PDQ 195
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSSQGVKIT-PDQ 195
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 160/204 (78%), Gaps = 9/204 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD +F +FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT + +F NI+NWIRNIEQHAS++V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIEQHASEDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+D+ KR V +G+ LA EY ++FFETSAK N+NVEE F +IARDIK+++ DS+A
Sbjct: 125 VDD-KRVVTKERGEQLAREYNVRFFETSAKANINVEEAFLTIARDIKKKI---DSKAPG- 179
Query: 192 TIKINQPDQAGGAAQAAQRSACCG 215
P G A ++ A G
Sbjct: 180 ----GAPKAGGAPASSSTIKAGAG 199
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 159/192 (82%), Gaps = 8/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ SKR V +G+ALA EYGIKF ETSAK+++NVEE FF++ARDIK ++ E +
Sbjct: 125 LT-SKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKM-------EKR 176
Query: 192 TIKINQPDQAGG 203
+ + P + GG
Sbjct: 177 LKEASNPPKGGG 188
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/177 (70%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
++E +R V +G+ LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 125 IEE-RREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRA 180
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 162/204 (79%), Gaps = 4/204 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V+++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK---QRLADTDSRA 188
++E +R V +G+ LA EYG KF ETSAK N+NVEE FF++ARDIK +R + ++
Sbjct: 125 IEE-RRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQENTTQ 183
Query: 189 EPQTIKINQPDQAGGAAQAAQRSA 212
I ++Q + + + R +
Sbjct: 184 NTGRITVHQTPRKSSSLFSGWRCS 207
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 160/190 (84%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK+++NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1305 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1364
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1365 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1424
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA+
Sbjct: 1425 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1474
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSRERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSSQGMKIT-PDQ 195
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGKKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1360 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1419
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1420 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1479
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA+
Sbjct: 1480 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1529
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 159/192 (82%), Gaps = 9/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ SKR V +G+ALA EYGIKF ETSAK+++NVEE FF++ARDIK ++ +
Sbjct: 125 LT-SKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKM--------EK 175
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 176 RLEASNPPKGGG 187
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 158/192 (82%), Gaps = 5/192 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP- 190
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ P
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKWKATAPG 183
Query: 191 --QTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 SNQGVKIT-PDQ 194
>gi|393218947|gb|EJD04435.1| GTP-binding protein SAS1 [Fomitiporia mediterranea MF3/22]
Length = 204
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 157/213 (73%), Gaps = 11/213 (5%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP+ YD+LIKLLLIGDSGVGKSCLL RF D ++T SFITTIGIDFKIRTIELDGKR
Sbjct: 3 PPS-----YDFLIKLLLIGDSGVGKSCLLTRFCDDTWTPSFITTIGIDFKIRTIELDGKR 57
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD+ SF+NI W +EQHAS+ V++
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQKSFDNIDTWFSAVEQHASNEVDR 117
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
ILVGNK D +E KR V G+ AD+ GI F ETSAK VE+ FFS+A IK RL D
Sbjct: 118 ILVGNKCDWEE-KRVVSYDAGKEKADKLGIAFIETSAKEGKEVEKAFFSLAGAIKTRLID 176
Query: 184 TDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 216
T + EPQ Q Q GG + + +CC S
Sbjct: 177 TQTTEEPQ-----QSVQVGGETTSNNQGSCCQS 204
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1357 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1416
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1417 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1476
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA+
Sbjct: 1477 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1526
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ + YD LIKLLLIGDSGVGKSC+LLR+SD SFTTSFITTIGIDFK++TI+++GKR+K
Sbjct: 1332 VHSSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVK 1391
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGIL+VYDVTD+ SF NIRNW+ I+Q+AS NVNKIL
Sbjct: 1392 LQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKIL 1451
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
+GNK D+D S+RAV T +GQ LADE+GI+FFETSAK+N+N++ F +IA+
Sbjct: 1452 IGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1501
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
MD+ +RAV KG+ LA EYGIKF ETSAK ++NVEE F ++ARDIK ++
Sbjct: 125 MDD-RRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFVTLARDIKSKM 173
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 161/190 (84%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK+D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK+++NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDSNSP 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ KR V KG+ LA +YGIKF ETSAK+++NVEE FF++ARDI +L
Sbjct: 125 MND-KRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKL 173
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 62
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 122
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ KR V KG+ LA +YGIKF ETSAK+++NVEE FF++ARDI +L
Sbjct: 123 MND-KRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKL 171
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE F+++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 159/196 (81%), Gaps = 4/196 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSRA 188
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ T R
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLATAPRG 183
Query: 189 EPQTIKINQPDQAGGA 204
+ K +Q + G A
Sbjct: 184 VTRESKSHQTSRRGAA 199
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 159/191 (83%), Gaps = 5/191 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQP 198
+KI +
Sbjct: 184 GAGGPVKITES 194
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GSGGPVKITE 193
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK+++NVEE FF +ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PD
Sbjct: 184 GSNQGVKIT-PDH 195
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 159/198 (80%), Gaps = 9/198 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M++ KR V +G+ LA +YGIKF ETSAK+++NVEE F+++ARDI RL +
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLARDIMARL--------NR 175
Query: 192 TIKINQPDQAGGAAQAAQ 209
+ N P GG + +
Sbjct: 176 KMNDNNPSGGGGPVKITE 193
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI LDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYR AMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADTDSRAE 189
D +E KRAV +GQ LA+E GI F E SAK N+NV++ F+S+A +IK+ + +A
Sbjct: 126 DGEE-KRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSKAEQAG 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q + I+ + GG+ +CC
Sbjct: 185 SQGVNIDNQNGTGGSLG----KSCC 205
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 162/196 (82%), Gaps = 11/196 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 68 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNKCD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE-- 189
+++ KR V G+ LA EYGIKF ETSAK+N+NVE F ++ARDIK ++ DS+ E
Sbjct: 128 IND-KRQVTKMGGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKTKM---DSKLEGN 183
Query: 190 -PQ----TIKINQPDQ 200
PQ +KI++P +
Sbjct: 184 APQGSSHGVKISEPQK 199
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 63
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 64 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 123
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ PQ
Sbjct: 124 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 182
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF E SAK+++NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 158/192 (82%), Gaps = 6/192 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPD 199
Q +KI PD
Sbjct: 184 GSSQGVKIT-PD 194
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 160/201 (79%), Gaps = 9/201 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M++ KR V KG+ LA +YGIKF ETSAK+++NVEE FF++ RDI +L +
Sbjct: 125 MND-KRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLGRDIMTKL--------NR 175
Query: 192 TIKINQPDQAGGAAQAAQRSA 212
+ N GG + ++S+
Sbjct: 176 KMNENISPSGGGPVKITEKSS 196
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 157/193 (81%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ----RLADTDSR 187
+++ KR V G+ LA EYGIKF ETSAK+N+NVE F ++ARDIK +L +
Sbjct: 125 IND-KRQVSKEMGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSKMDTKLEGNTPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI++P +
Sbjct: 184 GSSQGVKISEPQK 196
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 159/201 (79%), Gaps = 5/201 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA EYGIKF ETSAK N+NVE F ++ARDIK ++ + PQ
Sbjct: 125 IND-KRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGSSPQ 183
Query: 192 ----TIKINQPDQAGGAAQAA 208
+KI+QP + + A
Sbjct: 184 GSSHKVKISQPQKKSSFFRCA 204
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M++ +R V KG+ LA EYGIKF ETSAK+++NVEE FF++ARDIK ++ + P
Sbjct: 125 MND-RRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNP 182
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 158/192 (82%), Gaps = 8/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ E KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ E +
Sbjct: 125 LTE-KRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM-------EKK 176
Query: 192 TIKINQPDQAGG 203
+ + P + GG
Sbjct: 177 LKEASNPPKGGG 188
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 158/192 (82%), Gaps = 8/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ E KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ E +
Sbjct: 125 LTE-KRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM-------EKK 176
Query: 192 TIKINQPDQAGG 203
+ + P + GG
Sbjct: 177 LKEASNPPKGGG 188
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 160/201 (79%), Gaps = 9/201 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M++ KR V KG+ LA +YGIKF ETSAK+++NVEE FF++ARDI +L +
Sbjct: 125 MND-KRQVSREKGEKLAIDYGIKFLETSAKSSINVEEGFFTLARDIMTKL--------NR 175
Query: 192 TIKINQPDQAGGAAQAAQRSA 212
+ N GG + ++S+
Sbjct: 176 KMNENVSPGGGGPVKITEKSS 196
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ +R V KG+ LA EYGIKF ETSAK+++NVEE FF++ARDIK ++
Sbjct: 125 MND-RRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKM 173
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ +R V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-RRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 158/192 (82%), Gaps = 9/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ E KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ +
Sbjct: 125 LTE-KRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM--------EK 175
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 176 KLEASNPPKGGG 187
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 156/193 (80%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E KR V +G+ LA EYGIKF ETSAK N+NVE F ++ARDIK ++ PQ
Sbjct: 125 INE-KRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGNNPQ 183
Query: 192 T----IKINQPDQ 200
+ +KI Q
Sbjct: 184 SSNHGVKITTEQQ 196
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 159/195 (81%), Gaps = 9/195 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M++ KR V +G+ LA EYGIKF ETSAK ++NVE+ FF++ARDIK ++ +
Sbjct: 125 MND-KRQVSKDRGEQLAIEYGIKFMETSAKASINVEDAFFTLARDIKAKM--------EK 175
Query: 192 TIKINQPDQAGGAAQ 206
++ + P GG Q
Sbjct: 176 KLEASHPSGKGGGHQ 190
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 158/192 (82%), Gaps = 9/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ E KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ +
Sbjct: 125 LTE-KRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM--------EK 175
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 176 KLEASNPPKGGG 187
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASLDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 156/190 (82%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ SF T+FI+TIGIDFKIRTIELDGKR+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+++E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL----ADTDSR 187
M + +R V +G+ LA +YG+KF ETSAK++LNVEE F+++ARDI L AD +
Sbjct: 125 MTD-RRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMARDILHNLSSKTADPTAG 183
Query: 188 AEPQTIKINQ 197
+ +KI +
Sbjct: 184 GSGKPVKITE 193
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASQDVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E +R V +G+ LA EYGIKF ETSAK ++NVEE FF++ARDIK ++ + P
Sbjct: 125 M-EDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDIKLKMDKKLENSNP 182
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E KR V +G+ LA EYGIKF ETSAK N+NVE F ++ARDIK ++ PQ
Sbjct: 125 INE-KRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDTKLEGNNPQ 183
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 161/196 (82%), Gaps = 11/196 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 21 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 80
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 81 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCD 140
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE F ++ARDIK ++ D++ E
Sbjct: 141 IND-KRQVSKDRGEQLALDYGIKFMETSAKANINVENAFLTLARDIKSKM---DTKLEGN 196
Query: 192 T-------IKINQPDQ 200
T +KI++P +
Sbjct: 197 TQQGGSHGVKISEPQK 212
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIEL+GK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIR WIRNIE+HAS++V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIRTWIRNIEEHASNDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ +R V KG+ALA EYG+KF ETSAK ++NVEE F S+ARDIK ++
Sbjct: 125 MND-RRQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDIKAKM 173
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 158/191 (82%), Gaps = 5/191 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+ IGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISPIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQP 198
+KI +
Sbjct: 184 GAGGPVKITES 194
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CLL RF++ SF +FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT AYYRGAMGILLVY++T+E SF NI+NW+RNIE+HAS NV KI++GNK D
Sbjct: 65 AGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKNWVRNIEEHASANVEKIILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
M E KR V +G LA EYG+KF ETSAK N+NVE FF++ARDIK +
Sbjct: 125 M-EDKRQVSRERGAQLAIEYGVKFMETSAKANINVESAFFTLARDIKAK 172
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE F ++ARDI RL
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTRL 173
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 151/179 (84%), Gaps = 3/179 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ SF T+FI+TIGIDFKIRTIELDGKR+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD ++E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDTSNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
M + +R V +G+ LA +YG+KF ETSAK+ LNVEE F+++ARDI L+ TDS A
Sbjct: 125 MTD-RRQVSKDRGEKLAIDYGVKFMETSAKSGLNVEEAFYTMARDILHNLSSKTTDSGA 182
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ +R V KG+ LA EYGIKF ETSAK+ NVEE FF++ARDIK ++
Sbjct: 125 MND-RRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKM 173
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 161/199 (80%), Gaps = 9/199 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E KR V +G+ LA EYGIKF ETSAK ++NV+E FF++ARDIK ++ + R E
Sbjct: 125 LNE-KRQVTRDRGEQLAVEYGIKFMETSAKASINVDEAFFTLARDIKCKM---EKRMEA- 179
Query: 192 TIKINQPDQAGGAAQAAQR 210
N P + G +A+++
Sbjct: 180 ----NNPPKGGHQLKASEQ 194
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 154/198 (77%), Gaps = 2/198 (1%)
Query: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
IKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI LDGKR+KLQIWDTAGQE
Sbjct: 979 IKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQE 1038
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTITTAYYR AMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK D +E
Sbjct: 1039 RFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKCDGEE- 1097
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKI 195
KRAV +GQ LA+E GI F E SAK N+NV++ F+S+A +IK+ + D + + +
Sbjct: 1098 KRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDM-DVSKAEQAGSQGV 1156
Query: 196 NQPDQAGGAAQAAQRSAC 213
N +Q GGA + +S C
Sbjct: 1157 NIDNQNGGAGGSLGKSCC 1174
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 161/195 (82%), Gaps = 6/195 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVEE F ++ARDIK ++L + +
Sbjct: 125 VND-KRQVSKDRGEKLALDYGIKFMETSAKANINVEEAFLTLARDIKAKMDKKLEGNNPQ 183
Query: 188 AEPQTIKIN-QPDQA 201
Q +KI QP ++
Sbjct: 184 GSSQGVKITEQPKKS 198
>gi|346321156|gb|EGX90756.1| GTP-binding protein SAS1 [Cordyceps militaris CM01]
Length = 227
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
+IKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWDTAGQ
Sbjct: 26 VIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 85
Query: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFN-------NIRNWIRNIEQHASDNVNKILVG 127
ERFRTITTAYYRGAMGILLVYDVTDE SFN +IR W +N+EQHA++ VNKIL+G
Sbjct: 86 ERFRTITTAYYRGAMGILLVYDVTDERSFNTHSLTNLDIRTWFQNVEQHATEGVNKILIG 145
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D E KR + +GQALADE GI F E SAK+N+N+++ F+S+A DIK+RL D
Sbjct: 146 NKCDW-EDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKN 204
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ +N D+ G CC
Sbjct: 205 EAGSSGGVNVGDKTEGGMGG----KCC 227
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 158/196 (80%), Gaps = 10/196 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTI+LDGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M E +R V +G+ LA EYG+KF ETSAK+++NVEE FF++ RDIK ++ +
Sbjct: 125 M-EDRRQVSRDRGEKLAIEYGVKFMETSAKSSINVEEAFFTLGRDIKAKM--------DK 175
Query: 192 TIKINQPDQAGGAAQA 207
+ +N P Q GG Q
Sbjct: 176 KLDLNSP-QKGGNVQV 190
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++ KR V +G+ LA +GIKF ETSAK N+N+E FF++ARDIK ++L +
Sbjct: 125 AND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI Q Q
Sbjct: 184 GSNQGVKITQDQQ 196
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 159/195 (81%), Gaps = 6/195 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA EYGIKF ETSAK N+NVE F ++ARDIK ++L + +
Sbjct: 125 VND-KRQVSKERGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQ 183
Query: 188 AEPQTIKI-NQPDQA 201
Q +KI QP ++
Sbjct: 184 GSNQGVKITEQPKKS 198
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2; Flags:
Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+E KR V +G+ LA +YGIKF ETSAK+++NVEE F ++ARDI +L
Sbjct: 125 MNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173
>gi|302507522|ref|XP_003015722.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
gi|291179290|gb|EFE35077.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
Length = 425
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 154/198 (77%), Gaps = 2/198 (1%)
Query: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
IKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTI LDGKR+KLQIWDTAGQE
Sbjct: 230 IKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWDTAGQE 289
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTITTAYYR AMGILLVYDVTDE SF NIR W N+EQHAS+ V+KIL+GNK D +E
Sbjct: 290 RFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKCDGEE- 348
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKI 195
KRAV +GQ LA+E GI F E SAK N+NV++ F+S+A +IK+ + D + + +
Sbjct: 349 KRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDM-DVSKAEQAGSQGV 407
Query: 196 NQPDQAGGAAQAAQRSAC 213
N +Q GGA + +S C
Sbjct: 408 NIDNQNGGAGGSLGKSCC 425
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 154/193 (79%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++ KR V +G+ LA +GIKF ETSAK N+N+E FF++ARDIK ++L +
Sbjct: 125 AND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 153/191 (80%), Gaps = 5/191 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ SF T+FI+TIGIDFKIRTIELDGKR+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+ +E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA----DTDSR 187
M + +R V +G+ LA +YG+KF ETSAK+ LNVEE F+++ RDI L+ D +
Sbjct: 125 MTD-RRQVSKDRGEKLAIDYGVKFLETSAKSGLNVEEAFYTMGRDILHNLSSKSTDNSAG 183
Query: 188 AEPQTIKINQP 198
+ +KI +
Sbjct: 184 GSGKPVKITEK 194
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 149/169 (88%), Gaps = 1/169 (0%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDTA
Sbjct: 4 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 63
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+
Sbjct: 64 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 123
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 124 ND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 171
>gi|306014151|gb|ADM76129.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014153|gb|ADM76130.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014155|gb|ADM76131.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014157|gb|ADM76132.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014159|gb|ADM76133.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014161|gb|ADM76134.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014163|gb|ADM76135.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014165|gb|ADM76136.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014167|gb|ADM76137.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014169|gb|ADM76138.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014171|gb|ADM76139.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014173|gb|ADM76140.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014175|gb|ADM76141.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014177|gb|ADM76142.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014179|gb|ADM76143.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014181|gb|ADM76144.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014183|gb|ADM76145.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014185|gb|ADM76146.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014187|gb|ADM76147.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014189|gb|ADM76148.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014191|gb|ADM76149.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014193|gb|ADM76150.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014195|gb|ADM76151.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014197|gb|ADM76152.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014199|gb|ADM76153.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014201|gb|ADM76154.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014203|gb|ADM76155.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014205|gb|ADM76156.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014207|gb|ADM76157.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014209|gb|ADM76158.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014211|gb|ADM76159.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014213|gb|ADM76160.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014215|gb|ADM76161.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014217|gb|ADM76162.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014219|gb|ADM76163.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014221|gb|ADM76164.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014223|gb|ADM76165.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014225|gb|ADM76166.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014227|gb|ADM76167.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014229|gb|ADM76168.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014231|gb|ADM76169.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014233|gb|ADM76170.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014235|gb|ADM76171.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014237|gb|ADM76172.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014239|gb|ADM76173.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014241|gb|ADM76174.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 141
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 135/141 (95%)
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 1 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 60
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKI 195
KRAVPT++GQALADE+GIKFFETSAKTNLNVE+VFF+IARDIKQRLA++D++ EPQTIKI
Sbjct: 61 KRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQRLAESDTKVEPQTIKI 120
Query: 196 NQPDQAGGAAQAAQRSACCGS 216
N+PD A G +AA+RS+CC S
Sbjct: 121 NKPDPAKGPGKAAERSSCCTS 141
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 154/179 (86%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+++ +R V KG+ LA EYGIKF ETSAK+++NVEE FF++ARDIK ++ + P
Sbjct: 125 IND-RRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNP 182
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+++ +R V KG+ LA EYGIKF ETSAK+++NVEE FF++ARDIK ++
Sbjct: 125 IND-RRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKM 173
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 158/208 (75%), Gaps = 13/208 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ F ++FI+TIGIDFKI+TIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF+NI+ WIRNIEQ+AS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIEQNASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL----ADTDSR 187
M E KR V T +G+ LA EYG+ FFETSAK+ ++VEE FF++AR IKQ++ T
Sbjct: 125 M-EDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVSTPHE 183
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACC 214
E IK N+P+ G CC
Sbjct: 184 HEKDIIKPDNKPEPKSGG-------GCC 204
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 159/208 (76%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ E+ RAVP +A ADE GI F ETSAK + NVE+ F ++A IK+R+A + A
Sbjct: 124 DLTEN-RAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERMASQPTNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VGQKSGCCSS 202
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 158/192 (82%), Gaps = 9/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT++ SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ + KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ +
Sbjct: 125 LTD-KRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKME--------K 175
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 176 KLEASNPPKGGG 187
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 156/193 (80%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTI+LDGK+IKLQIWDT
Sbjct: 18 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDT 77
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 78 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 137
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP- 190
++E KR V +G+ LA EYGIKF ETSAK ++ VEE FF++ARDIK ++ + P
Sbjct: 138 LEE-KRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLARDIKAKMEKKLEASNPP 196
Query: 191 ---QTIKINQPDQ 200
+K +P +
Sbjct: 197 KGGHQLKATEPQR 209
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 156/193 (80%), Gaps = 5/193 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTI+LDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP- 190
++E KR V +G+ LA EYGIKF ETSAK ++ VEE FF++ARDIK ++ + P
Sbjct: 125 LEE-KRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLARDIKAKMEKKLEASNPP 183
Query: 191 ---QTIKINQPDQ 200
+K +P +
Sbjct: 184 KGGHQLKATEPQR 196
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 160/197 (81%), Gaps = 8/197 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTI+LDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T++ SF NI+NWIRNIE+HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHAAADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ----RLADTDSR 187
M++ KR V +GQALA ++ +KF ETSAKT+ NVEE F S+ARDIK+ +L +S
Sbjct: 125 MND-KRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDIKKKMDRKLESPNSN 183
Query: 188 AEPQTIKI---NQPDQA 201
+ IK+ NQP +
Sbjct: 184 SNDGKIKVTTENQPKKG 200
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT++LDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVDLDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVERMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M++ +R V +G+ LA +Y IKF ETSAK+++NVEE F ++ARDI RL
Sbjct: 125 MND-RRQVSKERGEKLAIDYSIKFLETSAKSSINVEEAFLTLARDIMSRL 173
>gi|225717530|gb|ACO14611.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL +LLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFRLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQE FRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQECFRTITTAYYRGAMGIMLVYDLTNEKSFYNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M++ +R V KG+ LA EYGIKF ETSAK+++NVEE FF++ARDIK ++ + P
Sbjct: 125 MND-RRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNP 182
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT++ SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+ + KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++
Sbjct: 125 LTD-KRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM 173
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 154/191 (80%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK ++ + R E
Sbjct: 125 LNE-KRQVSRERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKAKM---EKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 158/192 (82%), Gaps = 9/192 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT++ SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ + KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ +
Sbjct: 125 LID-KRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKME--------K 175
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 176 KLEASNPPKGGG 187
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 158/209 (75%), Gaps = 8/209 (3%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
AR +D IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ IELD K++K
Sbjct: 2 ARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD +SF +IRNW+ I+QHA +VNKIL
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK DM + K V T +GQALADEYG+KFFETSAK N+NVE F IAR++K RL +
Sbjct: 122 IGNKCDMTDDK-VVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEG 180
Query: 186 SRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ ++ +N A A + +CC
Sbjct: 181 GPHKKDSVNLN-------AKPAPVKKSCC 202
>gi|406699720|gb|EKD02919.1| rab/GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 328
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 152/204 (74%), Gaps = 21/204 (10%)
Query: 21 IGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI 80
IGDSGVGKSCLLLRF D S+T SFITTIGID TIELDGKRIKLQIWDTAGQERFRTI
Sbjct: 136 IGDSGVGKSCLLLRFCDDSWTPSFITTIGIDL---TIELDGKRIKLQIWDTAGQERFRTI 192
Query: 81 TTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP 140
TTAYYRGAMGIL+VYDVTDE SFNN+R W + IEQHAS VNKIL+GNK D DE KR V
Sbjct: 193 TTAYYRGAMGILIVYDVTDEKSFNNVRTWHQQIEQHASAGVNKILIGNKCDWDE-KRVVT 251
Query: 141 TSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQ 200
+G+ALADE+G++F ETSAK N VEE FF++ARDIK RL D+ +PQT QP +
Sbjct: 252 LEQGRALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLIDS----QPQT---EQPVK 304
Query: 201 AGGA----------AQAAQRSACC 214
GGA Q+ Q CC
Sbjct: 305 LGGADSGSVNVAKQNQSNQSGGCC 328
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 158/196 (80%), Gaps = 7/196 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDY KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYWFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA EYGIKF ETSAK N+NVE F +ARDIK ++L + +
Sbjct: 125 VND-KRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLHLARDIKAKMDKKLEGNNPQ 183
Query: 188 AEPQTIKI--NQPDQA 201
Q +KI QP ++
Sbjct: 184 GSSQGVKITTEQPKKS 199
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+ WIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E +R V +G+ LA EYGIKF ETSAK ++NVEE F ++ARDIK ++ D + P
Sbjct: 125 M-EDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDIKGKM-DKKMESSP 181
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 157/209 (75%), Gaps = 8/209 (3%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
AR +D IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ IELD K++K
Sbjct: 2 ARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD +SF +IRNW+ I+QHA +VNKIL
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK DM + K V T +GQALADEYG+KFFETSAK N+NVE F IAR++K RL +
Sbjct: 122 IGNKCDMTDDK-VVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEG 180
Query: 186 SRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ ++ +N A A + CC
Sbjct: 181 GPHKKDSVNLN-------AKPAPVKKGCC 202
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ E+ RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A
Sbjct: 124 DLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ++ CC +
Sbjct: 183 RPPTVQIRGQP--------VAQKNGCCST 203
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 178
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ E+ RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A
Sbjct: 179 DLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 237
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ++ CC +
Sbjct: 238 RPPTVQIRGQP--------VAQKNGCCST 258
>gi|440803267|gb|ELR24175.1| RabE family small GTPase, partial [Acanthamoeba castellanii str.
Neff]
Length = 155
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/156 (80%), Positives = 141/156 (90%), Gaps = 3/156 (1%)
Query: 1 MAA--PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE 58
MAA PPA + YDYLIKLLLIGDSGVGKSCLLLRFSD SFT SFITTIGIDFKIRTIE
Sbjct: 1 MAATHPPAGGKQAYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIE 60
Query: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
L+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+
Sbjct: 61 LEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT 120
Query: 119 DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIK 154
++VNK+L+GNK+DM + K+ + T++G+ LADEYGI+
Sbjct: 121 ESVNKMLIGNKSDMVD-KKVIDTARGKGLADEYGIR 155
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 162/206 (78%), Gaps = 6/206 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++ S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A+++VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANESVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V T+ + AD GIKF ETSAKT+ NVE+ F ++A++IK+R+A ++P
Sbjct: 124 DL-TTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMA-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QT K + G AQ + S+ C S
Sbjct: 178 QTQKTSSGIHVGANAQEVKESSSCCS 203
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 161/209 (77%), Gaps = 11/209 (5%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YDYL KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIE+ GK+IKLQ
Sbjct: 2 AKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T E +F+NI W+RNIE+HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ +R V +G+ +A E+GI+F ETSAKTN+N+E+ F +A+DI ++ + DS
Sbjct: 122 NKCDMDD-RRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSE 180
Query: 188 AEPQTIKIN-QPDQAGGAAQAAQRSACCG 215
I ++ Q D+ GG CCG
Sbjct: 181 EPSNNIHVHDQKDKKGG---------CCG 200
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 152/178 (85%), Gaps = 2/178 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIG+SGVGK+C+L RFSD +F SFI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 6 YDYLFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI++VYD+T+ SF+N++NWI+NIE++AS++V +L+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIEENASEDVELMLLGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
M+ES RAV +G+ LA +YGI F ETSAK N+NVEE FF +AR+IK+++ D+ R E
Sbjct: 126 MEES-RAVSKEQGEKLASDYGIPFLETSAKANINVEEAFFQLARNIKKKM-DSKRRGE 181
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 159/195 (81%), Gaps = 6/195 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RF+D +F ++FI+TIGIDFKIRTI+L+GK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFADDAFNSTFISTIGIDFKIRTIDLNGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ +R V +G+ LA EYGIKF ETSAK N+NVE F ++ARDIK ++L + +
Sbjct: 125 VND-RRQVSKERGEQLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQ 183
Query: 188 AEPQTIKI-NQPDQA 201
Q +KI QP ++
Sbjct: 184 GSNQGVKITEQPKKS 198
>gi|384500796|gb|EIE91287.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 193
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 146/190 (76%), Gaps = 3/190 (1%)
Query: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
GVGKSCLLLRFSD SFT SFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY
Sbjct: 7 GVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 66
Query: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
YRGAMGILLVYD TDE SF N+RNW NIEQHAS+ VNKIL+GNK D E KR + +G
Sbjct: 67 YRGAMGILLVYDTTDERSFGNVRNWFSNIEQHASEGVNKILIGNKCDA-EDKRVISKEQG 125
Query: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGA 204
+ LA+E GI+F ETSAK N+ VEE FF +ARDIK+RL DT + + + + DQ+
Sbjct: 126 ETLANELGIRFMETSAKANIGVEEAFFDLARDIKKRLIDTQQAQQTRQREEVRLDQS--T 183
Query: 205 AQAAQRSACC 214
A CC
Sbjct: 184 PSKANNGGCC 193
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 159/212 (75%), Gaps = 13/212 (6%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ ++ YD LIKLLLIGDSGVGKSCLLLRF + FT SFITTIGIDFKIRTI++ +R+K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V IL
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+DE KR V T +GQALAD++GI F E S+KTN+NVEE F+S+A I+ +A T
Sbjct: 122 VGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT- 179
Query: 186 SRAEPQTIKINQPDQAG-GAAQAAQRSA--CC 214
K N+ G A+ + SA CC
Sbjct: 180 --------KGNESGSGGINIAEGEENSASKCC 203
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 153/191 (80%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK A T+ R E
Sbjct: 125 LND-KRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|393911208|gb|EJD76212.1| hypothetical protein LOAG_16781 [Loa loa]
Length = 292
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 149/177 (84%), Gaps = 5/177 (2%)
Query: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
+ LLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDTAGQE
Sbjct: 92 VTLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 151
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V+++++GNK D++E
Sbjct: 152 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCDVEE- 210
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+R V +G+ LA EYG KF ETSAK N+NVEE FF++ARDIK + RA QT
Sbjct: 211 RRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLK----TERASQQT 263
>gi|341875743|gb|EGT31678.1| hypothetical protein CAEBREN_09245 [Caenorhabditis brenneri]
gi|341876669|gb|EGT32604.1| hypothetical protein CAEBREN_03557 [Caenorhabditis brenneri]
Length = 211
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E + Q LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 125 IEERREVSRERGEQ-LAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGS 183
Query: 192 TIKINQPDQAGGAAQ 206
+ + G Q
Sbjct: 184 VSNTGRVNVGGSGTQ 198
>gi|308485078|ref|XP_003104738.1| CRE-RAB-8 protein [Caenorhabditis remanei]
gi|308257436|gb|EFP01389.1| CRE-RAB-8 protein [Caenorhabditis remanei]
Length = 211
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 152/195 (77%), Gaps = 1/195 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E + Q LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 125 IEERREVSRERGEQ-LAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGS 183
Query: 192 TIKINQPDQAGGAAQ 206
+ + + G Q
Sbjct: 184 SSNAGRVNVGGTGTQ 198
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 152/191 (79%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ + KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK A T+ R E
Sbjct: 125 LHD-KRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|268560906|ref|XP_002646318.1| C. briggsae CBR-RAB-8 protein [Caenorhabditis briggsae]
Length = 211
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFSD SF SFI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE+HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E + Q LA EYG KF ETSAK NLN++E FF++ARDIK ++ + RA
Sbjct: 125 IEERREVSRERGEQ-LAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMRAGGS 183
Query: 192 TIKINQPDQAGGAAQ 206
+ + G Q
Sbjct: 184 ASNTGRVNVGGTGTQ 198
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 159/213 (74%), Gaps = 8/213 (3%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
A AR +D IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ IELDG
Sbjct: 15 AGRMARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDG 74
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
K+IKLQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD +SF +IRNW+ I+QHA +V
Sbjct: 75 KKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHV 134
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NKIL+GNK DM + K + T +GQALADEYG++F+ETSAK N+NVE F IAR++K RL
Sbjct: 135 NKILIGNKCDMMDDK-VISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKNRL 193
Query: 182 ADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ + ++I ++ A + CC
Sbjct: 194 MEEGGSHKKESINLS-------AKAIPPKKGCC 219
>gi|432094470|gb|ELK26033.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 207
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F +SFI+TIGIDFKIRTIELDGKRIKLQIW+T
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDTFNSSFISTIGIDFKIRTIELDGKRIKLQIWNT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
GQ+RFRTITTAYYRGA+G +LVYD+T+E SF+NIRNW RNIE+HAS +V K+++GNK D
Sbjct: 65 VGQDRFRTITTAYYRGAIGNMLVYDITNERSFDNIRNWTRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 153/191 (80%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++A+ +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK A T+ R E
Sbjct: 125 LND-KRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 152/191 (79%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ + KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK A T+ R E
Sbjct: 125 LTD-KRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 153/191 (80%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELD K+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++A+ +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA EYGIKF ETSAK ++NVEE F ++A DIK A T+ R E
Sbjct: 125 LND-KRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIK---AKTEKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 161/207 (77%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T +F+NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR +P +G+++A E+GIKF ETSAK+N+NVE+ F ++A DI ++ DS
Sbjct: 122 NKCDM-EDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDSN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ ++ +++ ++++S CC
Sbjct: 181 PDSSSVSVHK-------ETSSRKSGCC 200
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 156/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ E+ RAV +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-EANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPANNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ+ CC S
Sbjct: 183 PPTVQIRGQP--------VAQKGGCCSS 202
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 157/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S+RAV +A ADE GI F ETSAK + NVE+ F ++A IK R+A + A
Sbjct: 124 DL-TSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VGQKSGCCSS 202
>gi|347965503|ref|XP_321946.4| AGAP001211-PA [Anopheles gambiae str. PEST]
gi|333470481|gb|EAA01802.5| AGAP001211-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 156/191 (81%), Gaps = 9/191 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTI+LDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++A+ +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
++E KR V +G+ LA EYGIKF ETSAK ++NV++ FF++ARDIK ++ + R E
Sbjct: 125 LNE-KRQVTRVRGEQLAVEYGIKFMETSAKASINVDDAFFTLARDIKCKM---EKRMEA- 179
Query: 192 TIKINQPDQAG 202
N P + G
Sbjct: 180 ----NNPPKGG 186
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ E+ R VP +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A
Sbjct: 124 DLTEN-RDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ++ CC +
Sbjct: 183 RPPTVQIRGQP--------MAQKNGCCST 203
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VPT KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIE+DGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF+NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
++ S R V +G+ LA EYGIKF ETSAK ++NVEE F ++ARDI
Sbjct: 125 LN-SGRQVSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLARDI 169
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 27/215 (12%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV---------------------- 169
+++ KR V +G+ LA +YGIKF ETSAK N+NVE +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENLALDYGIKFMETSAKANINVENA 183
Query: 170 FFSIARDIK----QRLADTDSRAEPQTIKINQPDQ 200
FF++ARDIK ++L + Q +KI Q
Sbjct: 184 FFTLARDIKAKMDKKLEGNSPQGSNQGVKITTEQQ 218
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP SKG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 151/187 (80%), Gaps = 4/187 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NW+RNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIQNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ KR V +G+ LA +GIKF ETSAK N+N++ FF++ARDIK ++ D + E
Sbjct: 125 ITH-KRQVSREQGEKLAISFGIKFMETSAKANINIDNAFFTLARDIKAKI---DKKLEGN 180
Query: 192 TIKINQP 198
+ + N P
Sbjct: 181 SPQGNSP 187
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 10/207 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
+D L+KLLLIGDSGVGKSCLLLR+SD FTTSFITTIGIDFKI+TI+LD K++K+QIWDT
Sbjct: 11 FDVLVKLLLIGDSGVGKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDLDQKKVKMQIWDT 70
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT AYYRGA G+LLVYDVTDE+SF N+RNW+RNIE HAS+ L+GNK D
Sbjct: 71 AGQERFRTITAAYYRGAHGVLLVYDVTDETSFENVRNWMRNIEAHASEAAKVCLIGNKCD 130
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR----DIKQRLADTDSR 187
++SKR V +G ALA E+G+ FFETSAK+ L VEE F S+AR + K ++++
Sbjct: 131 CEDSKRKVTKERGVALAKEFGVPFFETSAKSGLRVEEAFSSMARRCVGESKTNNNNSNNS 190
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
T+++ + A+ +S+CC
Sbjct: 191 GGGGTVRLRET------AKGGSKSSCC 211
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 158/207 (76%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+++E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D +GG+ +S CC
Sbjct: 181 SE-------NVDISGGSGVTGWKSKCC 200
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G+ +S CC
Sbjct: 181 SE-------NVDISSGSGVTGWKSKCC 200
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ ES R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DLAES-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAANAS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T+++ QP AQ++ CC S
Sbjct: 183 KPATVQMRGQP--------VAQQNGCCSS 203
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G+ +S CC
Sbjct: 181 SE-------NVDISSGSGVTGWKSKCC 200
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 158/207 (76%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+++E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D +GG+ +S CC
Sbjct: 181 SE-------NVDISGGSGVTGWKSKCC 200
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ ES R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DLAES-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAGNAS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T+++ QP AQ++ CC S
Sbjct: 183 KPATVQMRGQP--------VAQQNGCCSS 203
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 159/207 (76%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+CLL RFSD +F+T+FI+TIGIDFKI+T+EL+GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T E +F+NI W+RNI++HA+++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR + +G+ +A E GIKF ETSAK N+NVE+ F ++A DI ++ D+
Sbjct: 122 NKCDMDD-KRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDT- 179
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
P +K PD G++ S CC
Sbjct: 180 GSPGVVK---PDMKEGSSSG---SKCC 200
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 156/206 (75%), Gaps = 11/206 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S+RAV +A ADE GI F ETSAK + NVE+ F ++A IK R+A + A
Sbjct: 124 DL-TSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACC 214
P T++I QP Q+S CC
Sbjct: 183 PPTVQIRGQP--------VGQKSGCC 200
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 158/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V T +A ADE GI F ETSAK +NVE+ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VNQKTSCCSS 203
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KL LIGDSGVGKSCLLLRF+D S+ S+I TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ E+ RAV +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-EANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPANNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ+ CC S
Sbjct: 183 PPTVQIRGQP--------VAQKGGCCSS 202
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G ++ CC
Sbjct: 181 SE-------NVDISTGGGVTGWKTKCC 200
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|401887691|gb|EJT51670.1| Rab/GTPase [Trichosporon asahii var. asahii CBS 2479]
Length = 299
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 141/172 (81%), Gaps = 8/172 (4%)
Query: 21 IGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI 80
IGDSGVGKSCLLLRF D S+T SFITTIGID TIELDGKRIKLQIWDTAGQERFRTI
Sbjct: 136 IGDSGVGKSCLLLRFCDDSWTPSFITTIGIDL---TIELDGKRIKLQIWDTAGQERFRTI 192
Query: 81 TTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP 140
TTAYYRGAMGIL+VYDVTDE SFNN+R W + IEQHAS VNKIL+GNK D DE KR V
Sbjct: 193 TTAYYRGAMGILIVYDVTDEKSFNNVRTWHQQIEQHASAGVNKILIGNKCDWDE-KRVVT 251
Query: 141 TSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+G+ALADE+G++F ETSAK N VEE FF++ARDIK RL D ++PQT
Sbjct: 252 LEQGRALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLID----SQPQT 299
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 161/209 (77%), Gaps = 7/209 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNIDEHANEDVERMLIG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR V T +G+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ DS
Sbjct: 122 NKCDM-EDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKDSG 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCGS 216
E ++ + + DQ+ G + CC +
Sbjct: 181 PEAGSVAVGR-DQSSGF-----KPRCCNT 203
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 160/207 (77%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--A 188
D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNAS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACC 214
+P T+++ QP AQ+S+CC
Sbjct: 183 KPATVQMRGQP--------VAQQSSCC 201
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKETYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASD+VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDSVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAVP +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-AANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q++ CC S
Sbjct: 183 RPPTVQIRGQP--------VPQKNGCCSS 203
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 154/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQGRTNAS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ + P Q AQ+S+CC
Sbjct: 183 KPATVQMPRQP-----VAQQSSCC 201
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 158/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + KRAV +A ADE GI F ETSAK LNVE+ F ++A IK R+A + A
Sbjct: 124 DLAD-KRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VDQKTSCCSS 203
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D G +S CC
Sbjct: 181 SE-------NVDFTSGGGVTGWKSKCC 200
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+++ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISTGGGVTGWKSKCC 200
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V T +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VNQKTSCCSS 203
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V + +A ADE GI F ETSAK NVE+ F ++A IK R+A S A
Sbjct: 124 DLTANK-VVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAASNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKTSCCSS 203
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA++++ ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDMERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ E+ RAV +A AD GI F ETSAK NVE+ F ++ IK R+A + A
Sbjct: 124 DL-EANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ+ CC S
Sbjct: 183 PPTVQIRGQP--------VAQKGGCCSS 202
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+ +L RFS+ +F SFI+TIGIDFKIRTI+LDGK++KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRG+MGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+ E+KR V +G+ LA EY IKF ETSAK +LNVE F+++ARDIK ++ P
Sbjct: 125 L-EAKRQVSKERGEQLAVEYQIKFIETSAKDSLNVESAFYTLARDIKAKMEKKQKVMNP 182
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+ +L RFS+ +F SFI+TIGIDFKIRTI+LDGK++KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRG+MGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+D +KR V +G+ LA EY IKF ETSAK +LNVE F+++ARDIK ++ + P
Sbjct: 125 LD-AKRQVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 158/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ +K V +A ADE GI F ETSAK+ NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQKSGCCSS 202
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|344241420|gb|EGV97523.1| Ras-related protein Rab-8A [Cricetulus griseus]
Length = 236
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 152/209 (72%), Gaps = 30/209 (14%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE----------------- 114
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEELRVQQWGVGYQPLSSP 124
Query: 115 ------------QHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKT 162
QHAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK
Sbjct: 125 HTAAVTLIIRSPQHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKA 183
Query: 163 NLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
N+NVE FF++ARDIK ++ PQ
Sbjct: 184 NINVENAFFTLARDIKAKMDKKLEGNSPQ 212
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+R+I++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRHIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 6/206 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D SF ++I+TIG+DFKIRT++LDGK +KLQIWD
Sbjct: 6 EYDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNNI+ W+ I+++ASDNV K+LVGNK
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +SK V T K +A AD GI F ETSAK ++NVEE F +++ +IK+R+A +
Sbjct: 126 DLVDSK-VVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERR 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+ ++ Q Q+S+CC S
Sbjct: 185 PTVHVHMKGQP-----IQQKSSCCSS 205
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 154/207 (74%), Gaps = 8/207 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T QA ADE GI F ETSAK NVEE F ++ IK R+A S A+
Sbjct: 124 DL-TSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPSGGAK 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCGS 216
P T++I G Q+S CC S
Sbjct: 183 PPTVQIR------GQPVNQQQSGCCSS 203
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA--DTDSRA 188
D++++ RAV +A ADE GI F E SAK+ NVE+ F ++A +IK R+A + A
Sbjct: 124 DLNDN-RAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T++I QP Q+S CC S
Sbjct: 183 KPPTVQIRGQP--------VNQKSGCCSS 203
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 155/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGID KI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 158/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ ++K V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A S A
Sbjct: 124 DLADNK-VVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRMASQPSNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQKSGCCSS 202
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVEE F ++A DIK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCSS 203
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 158/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR-AE 189
D+ + K+ V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLSD-KKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q++ CC S
Sbjct: 183 PATVQIRGQP--------VNQKAGCCSS 202
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT++LDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT+ YYRGA GI++VYDVTD SFNN++ W+ I+++A++NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVKTWLNEIDRYANENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SKRAV +A ADE GI F ETSAK++ NVE+ F ++A +IK R+A A+P
Sbjct: 124 DL-TSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEIKNRMASQTMAAKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
I +P + G + RS CC
Sbjct: 183 GAATI-RPGE--GKPISDNRSTCC 203
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKS LLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E KR V T +G+ AD GI+F ETSAKT+ NVE+ F ++A IK R+ + +P
Sbjct: 124 DL-EGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARM-----KNQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+P + + Q + S+CC
Sbjct: 178 SAAPATKPGVSLRSQQVKKDSSCC 201
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASD+VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDSVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +++ V T QA ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-TAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCLS 203
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V + +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKTSCCSS 203
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V T +A ADE GI F ETSAK NV++ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VNQKTSCCSS 203
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 156/206 (75%), Gaps = 3/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ I+++A DNVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A
Sbjct: 127 DL-HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGASD 185
Query: 191 QT--IKINQPDQAGGAAQAAQRSACC 214
QT +KI+Q + +S CC
Sbjct: 186 QTSKLKIDQGHNIDTSGIQGSKSGCC 211
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVE+ F ++A DIK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCSS 203
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/167 (68%), Positives = 146/167 (87%), Gaps = 1/167 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L+RFS+ +F ++FI+TIGIDFKIRT+E++GK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NIRNWIRNIE++AS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNWIRNIEENASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 178
+ ES R V +G+ LA+E+G+KF ETSAK+ +VE F S+A+DIK
Sbjct: 125 LHES-RVVSMERGRLLAEEHGVKFMETSAKSGTHVETAFLSLAKDIK 170
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 157/208 (75%), Gaps = 12/208 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
+DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDT
Sbjct: 9 FDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 68
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+D
Sbjct: 69 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 128
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAE 189
+ +K V T +A ADE GI F ETSAK +NVE+ F ++A IK R+A + A
Sbjct: 129 LTANK-VVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANAR 187
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 188 PATVQIRGQP--------VNQKTSCCSS 207
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 156/206 (75%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A ++P
Sbjct: 124 DL-ASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAA--QRSACC 214
++P+ A Q+S CC
Sbjct: 178 ALSSTSKPNNVTNLRGQAIPQKSGCC 203
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 158/208 (75%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSR 187
D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGA 182
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACC 214
+ P T+++ QP +Q+S+CC
Sbjct: 183 SRPATVQMRGQP--------VSQQSSCC 202
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 156/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ E+K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTENK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQKSGCCSS 202
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DGS+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK + NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQNSGCCSS 203
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 159/213 (74%), Gaps = 12/213 (5%)
Query: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKL 66
R+ A DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKL
Sbjct: 69 RSAALDDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKL 128
Query: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILV 126
QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LV
Sbjct: 129 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLV 188
Query: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD- 185
GNK+D+ +K V T +A ADE GI F ETSAK +NVE+ F ++A IK R+A
Sbjct: 189 GNKSDLTANK-VVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPA 247
Query: 186 -SRAEPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+ A P T++I QP Q+++CC S
Sbjct: 248 AANARPATVQIRGQP--------VNQKTSCCSS 272
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + K+ V +A ADE GI F ETSAK LNVE+ F +++ IK R+A + A
Sbjct: 124 DLTD-KKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VEQKTSCCSS 203
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 159/210 (75%), Gaps = 7/210 (3%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+R + +D IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ I+LD KRIK
Sbjct: 2 SRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD+ SFN+IRNW+ I+QHA VNKIL
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADT 184
+GNK DMDE R V +G LA EYGI+FFETSAK ++NVE+ F +IAR++K RL AD
Sbjct: 122 IGNKCDMDED-REVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADG 180
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ +N QA + +++ CC
Sbjct: 181 PNPGSRAAGNVNLNAQA-----SKKKTGCC 205
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI +++ SR
Sbjct: 122 NKCDMDD-KRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKVTAIFSR 180
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 20/212 (9%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V S +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DL-TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMAS------- 175
Query: 191 QTIKINQPDQAGGAAQAAQR--------SACC 214
Q I P +AGG Q S+CC
Sbjct: 176 QPI----PTKAGGPVVRPQEGKPINSKSSSCC 203
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + KR V +A ADE GI F ETSAK LNVE+ F +++ IK R+A + A
Sbjct: 124 DLTD-KRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VEQKTSCCSS 203
>gi|332253739|ref|XP_003275989.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8A
[Nomascus leucogenys]
Length = 207
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 154/193 (79%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIW
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWXE 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
+ +++F ITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 SFKQKFHXITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK +NVE+ F ++A DIK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q + CC S
Sbjct: 183 RPPTVQIRGQP--------VNQNTGCCSS 203
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 152/207 (73%), Gaps = 9/207 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E D K IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ + RAV +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-TANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPANNAR 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCGS 216
P T+ I+ Q S CC S
Sbjct: 183 PPTVNIS-------GKPVGQSSGCCSS 202
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 160/207 (77%), Gaps = 7/207 (3%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+++YD+L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQI
Sbjct: 4 QSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 63
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT++YYRGA GI++V+DVTD+ SFNN++ W+ I+++A++NVNK+LVGN
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQWLNEIDRYANENVNKLLVGN 123
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K D+ SKR V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 KTDL-TSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFMTMAAEIKNRMA-----R 177
Query: 189 EPQTIKINQPDQAG-GAAQAAQRSACC 214
EP K + G G + A Q+S+CC
Sbjct: 178 EPAVNKSANTIRPGEGKSIATQKSSCC 204
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 156/207 (75%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--A 188
D+ + R V G+A ADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DL-AANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAMNAS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACC 214
P T+++ QP Q+S+CC
Sbjct: 183 RPATVQMRGQP--------VTQKSSCC 201
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 158/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + K+ V +A ADE GI F ETSAK LNVE+ F +++ IK R+A + A
Sbjct: 124 DLTD-KKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VEQKASCCSS 203
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA--DTDSRA 188
D++++ RAV +A ADE GI F E SAK+ NVE+ F ++A +IK R+A + A
Sbjct: 124 DLNDN-RAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T++I QP Q++ CC S
Sbjct: 183 KPPTVQIRGQP--------VNQKNGCCSS 203
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+ NI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N N+E+ F ++A+DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/170 (68%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LV+D+T+E SF NI+ WIRNIE+HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVFDITNERSFENIKTWIRNIEEHAASDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+ + KR V + Q LA EYG+KF ETSAK NVEE F ++A+DIK ++
Sbjct: 125 VVD-KRQVSKEQAQQLAAEYGVKFSETSAKDGHNVEEAFMTLAKDIKAKM 173
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL+KLLLIGDSGV KSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ E+ RAV +A AD GI F ETSAK NVE+ F ++ IK R+A + A
Sbjct: 124 DL-EANRAVSYEAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASIKDRMASQPANNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ+ CC S
Sbjct: 183 PPTVQIRGQP--------VAQKGGCCSS 202
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 155/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ +K V +A ADE GI F ETSAK+ NVEE F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T+ I QP Q+S CC S
Sbjct: 183 PPTVNIRGQP--------VNQKSGCCSS 202
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 157/206 (76%), Gaps = 11/206 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR-AE 189
D+ + K+ V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLSD-KKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACC 214
P T++I QP Q++ CC
Sbjct: 183 PATVQIRGQP--------VNQKAGCC 200
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 140/157 (89%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+ I+F ETSAK+N+N+E F +A I + + +S
Sbjct: 122 NKCDMSD-KRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTSGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
P+ + I++ G + +A S CC
Sbjct: 181 ENPERVVIDR----GNSDKATSYSKCCA 204
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 158/209 (75%), Gaps = 15/209 (7%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+EL+GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K+ V T +A ADE GI F ETSAK NVE+ F ++A +IK R+A +
Sbjct: 124 DL-TAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSN 182
Query: 189 EPQTIKIN--QP-DQAGGAAQAAQRSACC 214
+P + +N QP +Q GG CC
Sbjct: 183 KPNNVSLNKGQPLNQKGG---------CC 202
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 140/157 (89%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/170 (66%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+C+L+RFS+ +F ++FI+TIGIDFKIRT++++GK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF+NIRNWIRNIE++A+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNWIRNIEENAAADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
++ES R V +GQ LA+E+ +KF ETSAK+ NVE F ++A+DIK ++
Sbjct: 125 LEES-RVVSRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDIKNKM 173
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCSS 203
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 158/208 (75%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSR 187
D+ E+ R V G+ALAD+ GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DLAEN-RVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGA 182
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACC 214
+ P T+++ QP +Q+S+CC
Sbjct: 183 SRPATVQMRGQP--------VSQQSSCC 202
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 155/203 (76%), Gaps = 12/203 (5%)
Query: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQER
Sbjct: 2 KLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 61
Query: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESK 136
FRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+D+ E+
Sbjct: 62 FRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTEN- 120
Query: 137 RAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RAEPQTIK 194
RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A P T++
Sbjct: 121 RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQ 180
Query: 195 I-NQPDQAGGAAQAAQRSACCGS 216
I QP AQ++ CC +
Sbjct: 181 IRGQP--------VAQKNGCCST 195
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 156/206 (75%), Gaps = 3/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 3 EHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 62
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ I+++A DNVNK+LVGNK+
Sbjct: 63 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKS 122
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A
Sbjct: 123 DL-HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGASD 181
Query: 191 QT--IKINQPDQAGGAAQAAQRSACC 214
QT +KI+Q + +S CC
Sbjct: 182 QTSKLKIDQGHNIDTSGIQGSKSGCC 207
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 140/157 (89%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 68
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLEEIERYACENVNKLLVGNKC 128
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE- 189
D+ ++K+ V T+ A++ GI F ETSAK NVE+ F ++A +IK R+ S AE
Sbjct: 129 DL-QTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAEA 187
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P +KI++ + +S CC
Sbjct: 188 PSAVKIDK------SRSVESKSGCC 206
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +T +P
Sbjct: 124 DMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ Q G Q+ CC
Sbjct: 183 -TVQVGQ----GSNVQSGSAGGCC 201
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCSS 203
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 172
+++ KR V +G+ LA +YGIKF ETSAK N+NVE + S
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENRYQS 164
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/156 (74%), Positives = 139/156 (89%), Gaps = 1/156 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE 167
+++ KR V +G+ LA +YGIKF ETSAK N+NVE
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVE 159
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 155/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ +K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQKSGCCSS 202
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 156/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ +K V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLAANK-VVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPANNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC +
Sbjct: 183 PPTVQIRGQP--------MNQKSGCCST 202
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +T +P
Sbjct: 124 DMSD-KKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ Q G Q+ CC
Sbjct: 183 -TVQVGQ----GSNVQSGSAGGCC 201
>gi|432095538|gb|ELK26690.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 224
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 156/210 (74%), Gaps = 23/210 (10%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F +SFI+TIGIDFKIRTIELDGKRIKLQ DT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDTFNSSFISTIGIDFKIRTIELDGKRIKLQRLDT 64
Query: 72 AGQERFRTITTAYYRGAM-----------------GILLVYDVTDESSFNNIRNWIRNIE 114
AGQERFRTITTAYYRGAM G +LVYD+T+E SF+NIRNWIRNIE
Sbjct: 65 AGQERFRTITTAYYRGAMVRIAHSFSGTSLSPPAHGNMLVYDITNEKSFDNIRNWIRNIE 124
Query: 115 QHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 174
+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++A
Sbjct: 125 EHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA 183
Query: 175 RDIK----QRLADTDSRAEPQTIKINQPDQ 200
RDIK ++L + Q +KI PDQ
Sbjct: 184 RDIKAKMDKKLEGNSPQGSNQGVKIT-PDQ 212
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/156 (74%), Positives = 139/156 (89%), Gaps = 1/156 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE 167
+++ KR V +G+ LA +YGIKF ETSAK N+NVE
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVE 159
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + R V + AD+ GI F ETSAK NVE+ F +++ IK R+A S A
Sbjct: 124 DL-TANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKNRMASQPSANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T++I QP Q+S CC S
Sbjct: 183 KPPTVQIRGQP--------VGQKSGCCSS 203
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 160/208 (76%), Gaps = 10/208 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI NW+RNI++HA++NV K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVNWLRNIDEHANENVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E +R V T +G+A+A E+GI+F ETSAK N+N++ F R++ + + D
Sbjct: 122 NKSDM-EDRREVSTERGEAIAREHGIRFMETSAKANINIDRAF----RELAEAILDKTHG 176
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSA-CC 214
EPQ + PD+ + + S+ CC
Sbjct: 177 KEPQ----DAPDRVTVDRRVERTSSRCC 200
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 154/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASDNV+K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E KR V ++ ADE GI F ETSAK NVE+ F ++A ++K+R+A S+
Sbjct: 124 DMAE-KRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMA---SQLTE 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N + G Q Q+ +CC
Sbjct: 180 GNRKTNTVEMKGQPLQ--QKGSCC 201
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/156 (74%), Positives = 139/156 (89%), Gaps = 1/156 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE 167
+++ KR V +G+ LA +YGIKF ETSAK N+NVE
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVE 159
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 154/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGD GVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR V +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|432863260|ref|XP_004070049.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 239
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/162 (71%), Positives = 140/162 (86%), Gaps = 1/162 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ SF T+FI+TIGIDFKIRTIELDGKR+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+ +E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDICNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
M + +R V +G+ LA +Y +KF ETSAK++LNVEE F +
Sbjct: 125 MTD-RRQVSKDRGEKLAIDYRVKFLETSAKSSLNVEESFVHL 165
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V S + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMSD-KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++ + Q G ++ S+CC
Sbjct: 183 PSVHVGQGQGVGNSSS----SSCC 202
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVE+ F ++A DIK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMNNA 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACCGS 216
P ++++ QP Q+S CC S
Sbjct: 183 RPPSVQLQGQP--------VNQKSGCCSS 203
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 158/205 (77%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ + ++
Sbjct: 127 DL-TTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDS 185
Query: 191 Q-TIKINQPDQAGGAAQAAQRSACC 214
+ ++KIN +A + CC
Sbjct: 186 KPSVKINS-----STPVSANKGGCC 205
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 155/206 (75%), Gaps = 6/206 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ ++I+TIG+DFKIRTI+LDGK +KLQIWD
Sbjct: 6 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNNI+ W+ I+++ASDNV K+LVGNK
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +SK V T K + AD GI F ETSAK ++NVEE F +++ +IK+R+A +
Sbjct: 126 DLVDSK-VVDTEKAKDFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERR 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+ ++ Q Q+S+CC S
Sbjct: 185 PTVHVHMKGQP-----IQQKSSCCSS 205
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S+RA +A ADE GI F ETSAK + NVE+ F ++A IK R+A + A+
Sbjct: 124 DL-TSERAASYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNAK 182
Query: 190 PQTIKI--NQPDQAGGAAQAAQR 210
P T++I +Q + GAA +
Sbjct: 183 PPTVQIRDSQLARKVGAAHLNHK 205
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAV +A ADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DL-TANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSS 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACC 214
P T+++ QP Q+S CC
Sbjct: 183 RPATVQMKGQP--------VVQKSGCC 201
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 153/207 (73%), Gaps = 9/207 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL+GKRIKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGILLVYD+T+ SF NI W+RNIE+HA+++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E R V +KG+ +A E+ I+FFETSAK N+N+E+ F ++A DI + +
Sbjct: 122 NKCDM-EDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHKTPGKEPT 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
E + N+ +GG CC
Sbjct: 181 NENVDVN-NRSGSSGGV-------RCC 199
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 155/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + ++
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PSTVQIRGQP--------VNQQSGCCSS 202
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 68
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+D+
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 128
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAEP 190
+K V + +A ADE GI F ETSAK NVE+ F ++A IK R+A + A P
Sbjct: 129 TANK-VVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANARP 187
Query: 191 QTIKI-NQPDQAGGAAQAAQRSACCGS 216
T++I QP Q+++CC S
Sbjct: 188 PTVQIRGQP--------VNQKTSCCSS 206
>gi|440803956|gb|ELR24839.1| Rab8/RabEfamily small GTPase, putative [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 156/215 (72%), Gaps = 29/215 (13%)
Query: 14 YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
+ +K+LL+GDSGVGKSCLL RFSDG+FT SF+ TIGIDFK+RT+ ++GK IKLQ+WDTAG
Sbjct: 9 HTLKMLLVGDSGVGKSCLLQRFSDGTFTHSFMPTIGIDFKVRTVPIEGKEIKLQLWDTAG 68
Query: 74 QERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMD 133
QERFRTIT AYYRG G++LVYDVTD++SF++I+ W++ IEQHAS VNKILVGNKADMD
Sbjct: 69 QERFRTITAAYYRGGHGVVLVYDVTDQNSFSHIKIWMKGIEQHASQGVNKILVGNKADMD 128
Query: 134 ESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT--DSRAEPQ 191
+ +GQ LA++YGI+F+ETSAKT NV+++F +A++IK R+ D D EPQ
Sbjct: 129 D-------KRGQELAEKYGIRFYETSAKTGQNVDDMFLLLAKEIKHRVIDPMGDEPEEPQ 181
Query: 192 TI-----------KINQPDQAGGAAQAAQRSACCG 215
K +QP +GG CCG
Sbjct: 182 ATSSSPKVDLTSSKDSQPQASGG---------CCG 207
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + ++ AD GI F ETSAK++ NVE+ F ++A +IK+R+ +
Sbjct: 124 DL-TTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGGL 182
Query: 191 QTIKINQPDQAG 202
+ ++ P+QAG
Sbjct: 183 REVQRQNPEQAG 194
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 156/208 (75%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ +K V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q++ CC +
Sbjct: 183 PPTVQIRGQP--------VNQKAGCCST 202
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKS LLLRF+D S+ S+I+TIG+DFKIRT++ DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +++ V T QA ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DL-TAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VNQKSGCCSS 203
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 157/209 (75%), Gaps = 13/209 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 68
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN+++W++ I+++A++NV+K+LVGNK+
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKS 128
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE- 189
D+ SK+ V +G+ LAD+ GI F ETSAK + NVE+ F ++R IK R+ T +
Sbjct: 129 DL-TSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSRS 187
Query: 190 ----PQTIKINQPDQAGGAAQAAQRSACC 214
P ++ QP +S CC
Sbjct: 188 GAGGPARLRPGQPAH-------GNQSGCC 209
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 153/206 (74%), Gaps = 8/206 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL+GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGA GI+LVYD+T+ SF NI W+RNIE+HAS++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISKWLRNIEEHASEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR + +G+ +A E+GIKF+ETSAK N+N+E F ++A DI + ++
Sbjct: 122 NKCDM-EDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKETG 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSAC 213
A + + Q Q + RS C
Sbjct: 181 AGSAGVDVTQQRQ-------SSRSCC 199
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +T +P
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ Q G Q+ CC
Sbjct: 183 -TVQVGQ----GSNVQSGSAGGCC 201
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + K+ V +A ADE GI F ETSAK LNVE+ F +++ IK R+A + A
Sbjct: 124 DLTD-KKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANSA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VEQKTSCCSS 203
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTTNNLK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ G A Q ++CC
Sbjct: 183 PTVQVG----PGHGVSATQSNSCC 202
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 158/207 (76%), Gaps = 5/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N+N+E F +A I + A +S
Sbjct: 122 NKCDMAD-KRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTAGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
P+ + +++ + +A +CC
Sbjct: 181 ENPERVVVDRRNN----EKAPAYKSCC 203
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A ++P
Sbjct: 124 DL-ASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA-----SQP 177
Query: 191 QTIKINQPDQAGGAAQA-AQRSACC 214
++P+ Q + CC
Sbjct: 178 ALSSTSRPNNVQLRGQTILPKGGCC 202
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +T +P
Sbjct: 124 DMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTAINNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ Q G Q+ CC
Sbjct: 183 -TVQVGQ----GSNVQSGSAGGCC 201
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 155/206 (75%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + S A
Sbjct: 124 DL-TAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSSA 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+P TI + G Q + CC
Sbjct: 183 KPTTIPLR-----GQVLQ--HKPNCC 201
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 162/212 (76%), Gaps = 11/212 (5%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+R + +D IKLL+IGD+GVGK+CLLLR+++ SF+ +FITTIGIDFKI+ I+LD KRIK
Sbjct: 2 SRNDSPFDMQIKLLMIGDTGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD+ SFN+IRNW+ I+QHA VNKIL
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-AD- 183
+GNK DMDE R V +G LA EYGI+FFETSAK ++NVE+ F +IAR++K RL AD
Sbjct: 122 IGNKCDMDED-REVSKEEGANLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADG 180
Query: 184 -TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+T+ IN G A++ +++ CC
Sbjct: 181 PGGGGGHGRTVDIN-----GQASK--KKTGCC 205
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--A 188
D+ +K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A S A
Sbjct: 124 DL-TAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSAA 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+P TI + G Q + CC
Sbjct: 183 KPTTIPLR-----GQVLQ--HKPNCC 201
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V +A ADE GI F ETSAK NVE+ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAMNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
+P T+++ QP Q+ CC S
Sbjct: 183 KPSTVQLRGQP--------VEQKGGCCSS 203
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 155/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ S + V + +A ADE GI F ETSAK NVE+ F +++ IK R+A + A
Sbjct: 124 DL-TSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNNA 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACCGS 216
+P T++ QP Q+ CC S
Sbjct: 183 KPSTVQFKGQP--------VEQKGGCCSS 203
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 156/199 (78%), Gaps = 6/199 (3%)
Query: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
+KLLLIGDS VGKS LLLRF++ SF+ +FI+TIG+DFK RTI++DG+++KL IWDTAGQE
Sbjct: 13 LKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQE 72
Query: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 135
RFRTIT AYYRGA GI+LVYD+T ESSFN+IR WIRNIE+HAS+NV KILVGNKADM E
Sbjct: 73 RFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHASENVCKILVGNKADM-ED 131
Query: 136 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKI 195
+R V +GQALA+E+ IKFFETSAK ++NVEE F IAR+ K +LA T+K+
Sbjct: 132 RRVVSKEQGQALANEFRIKFFETSAKADINVEEAFVCIARESK-KLAGPPPDKGSNTLKV 190
Query: 196 NQPDQAGGAAQAAQRSACC 214
+ P A +AA +CC
Sbjct: 191 D-PTTGNNAPKAA---SCC 205
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 158/207 (76%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ + +E
Sbjct: 127 DL-TTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVTAASEN 185
Query: 191 Q-TIKINQ--PDQAGGAAQAAQRSACC 214
+ ++KIN P + GG CC
Sbjct: 186 KPSVKINSSTPVKQGGG-------GCC 205
>gi|112982896|ref|NP_001037576.1| small GTP binding protein RAB8 [Bombyx mori]
gi|95102574|gb|ABF51225.1| small GTP binding protein RAB8 [Bombyx mori]
gi|102993217|gb|ABF71468.1| ras-related GTP-binding protein Rab8 [Bombyx mori]
Length = 210
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+ +L RFS+ +F SFI+TIGIDFKIRTI+LDGK++KLQIWDT
Sbjct: 5 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRG+MGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+D S+R V +G+ LA EY IKF ETSAK +LNVE F+++ARDIK ++ + P
Sbjct: 125 LD-SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 156/204 (76%), Gaps = 6/204 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK +KLQIW
Sbjct: 3 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A+D VNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SKRAV TS + AD GI F ETSAK + NVE+ F ++A +IK R+A
Sbjct: 123 SDL-ASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQA----- 176
Query: 190 PQTIKINQPDQAGGAAQAAQRSAC 213
P + + Q G ++ ++ C
Sbjct: 177 PAGKEGSASIQVGKGSEVTKKGCC 200
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++ + Q G ++ S+CC
Sbjct: 183 PSVHVGQGQGVGNSSS----SSCC 202
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K+ V +A ADE GI F ETSAK +NVE+ F ++A +IK R+A +
Sbjct: 124 DL-TAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQPAMNST 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACC 214
P T+++ QP +S CC
Sbjct: 183 RPTTVQMKGQP--------VVPKSGCC 201
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 156/211 (73%), Gaps = 9/211 (4%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IK
Sbjct: 2 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTIT++YYRGA GI++VYD+TD+ +FNN++ W++ I+++A +NVNK+L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+ +KRAV T Q A + GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 122 VGNKCDL-TAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQ 180
Query: 186 SRAEPQTIKI--NQPDQAGGAAQAAQRSACC 214
++I +QP Q + S CC
Sbjct: 181 GAGGAPGVRITGSQP------VQDKKSSGCC 205
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASDNV+K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ E K+AV ++ ADE GI F ETSAK NVE+ F ++A ++K+R+A T+
Sbjct: 124 DLTE-KQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNR 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACC 214
+ T+++ QP Q Q+ CC
Sbjct: 183 KANTVEMKGQPLQ--------QKGGCC 201
>gi|388582968|gb|EIM23271.1| rab GTPase SrgA [Wallemia sebi CBS 633.66]
Length = 207
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 156/206 (75%), Gaps = 16/206 (7%)
Query: 12 YDYLIKL-----LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKL 66
YD+LI + LLIGDSGVGKSCLLLRF D ++T SFITTIGIDFKIRTIELDGKRIKL
Sbjct: 6 YDFLITINKPLVLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 65
Query: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILV 126
QI AGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+ Q+AS+ VNKILV
Sbjct: 66 QI---AGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNVVQYASEGVNKILV 122
Query: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--- 183
GNK D DE KRA+ +G+ LAD IKF ETSAK N+ VE+ FF++ARDIK RL D
Sbjct: 123 GNKCDWDE-KRAITQDQGKELADSLEIKFIETSAKNNVGVEDAFFTLARDIKSRLIDSQS 181
Query: 184 TDSRAEPQTIKIN----QPDQAGGAA 205
+ S + ++K++ QP +GG
Sbjct: 182 SGSNNQSNSVKVDASQQQPSTSGGCC 207
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/157 (73%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RF + +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFPEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T + +P
Sbjct: 124 DMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+++ G Q+ CC
Sbjct: 183 -TVQVT----GGQGVQSGSAGGCC 201
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/158 (72%), Positives = 140/158 (88%), Gaps = 1/158 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169
+++ KR V +G+ LA +YGIKF ETSAK N+NVE V
Sbjct: 125 IND-KRQVSKDRGEKLALDYGIKFMETSAKANINVENV 161
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 152/204 (74%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A+D VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK + NVE+ F ++A +IK R+A P
Sbjct: 124 DL-TAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQA-----P 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
Q Q G A ++ CC
Sbjct: 178 APKSGGQSIQVGAGAAVGEKKGCC 201
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL K+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQEKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+ NI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N N+E+ F ++A+DI ++ +
Sbjct: 122 NKFDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G + +S CC
Sbjct: 181 SE-------NVDISSGGSVTGWKSKCC 200
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+ I+F ETSAK+N+N+E F +A I + A +S
Sbjct: 122 NKCDMTD-KRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTAGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
P+ + I++ G + +A + CC
Sbjct: 181 ENPERVVIDR----GNSDKAPGYNKCCA 204
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
Query: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKL 66
R A+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KL
Sbjct: 4 RVSAEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 63
Query: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILV 126
QIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LV
Sbjct: 64 QIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLV 123
Query: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
GNK+DM + K+ V + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ T +
Sbjct: 124 GNKSDMAD-KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQIKERMGTTTA 182
Query: 187 RAEP 190
+P
Sbjct: 183 NTKP 186
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 159/207 (76%), Gaps = 5/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N+N+E F +A I + + +S
Sbjct: 122 NKCDMGD-KRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
P+ + I++ + + +A + CC
Sbjct: 181 ENPERVVIDRAN----SDKAPGYNKCC 203
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A +P
Sbjct: 124 DL-TAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVINKP 182
Query: 191 -QTIKINQPDQAGGAAQAAQRSACC 214
TI+ + G + +S+CC
Sbjct: 183 GATIRPGE-----GKPVNSSKSSCC 202
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-SRAE 189
D+ +K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNAR 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q++ CC +
Sbjct: 183 PPTVQIRGQP--------VNQKAGCCST 202
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 149/181 (82%), Gaps = 2/181 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+ +L RFSD F SFI+TIGIDFKIR IE+DGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT E++F NI+ WIRN ++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHAAADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEP 190
M+E R V +G+ LA E+ IKF ETSA +++NVEE F+++ARDIK+++ +RA+P
Sbjct: 125 MNEL-RQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKEKMERKVAARAQP 183
Query: 191 Q 191
+
Sbjct: 184 K 184
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 153/209 (73%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KL LIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAV + AD+ GI F ETSAK NVE F ++A IK R+A S A
Sbjct: 124 DL-TANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VGQKSGCCSS 203
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + A+
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAK 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQQSGCCSS 202
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 9/207 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR V SKG+ +A E+ I+FFETSAK N+N+E+ F ++A DI Q+
Sbjct: 122 NKCDM-EDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTP----V 176
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
EP ++ GG CC
Sbjct: 177 KEPDRENVDISTTGGGTGL----KKCC 199
>gi|397605930|gb|EJK59155.1| hypothetical protein THAOC_20656 [Thalassiosira oceanica]
Length = 206
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 9/212 (4%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
PA + A YD +KLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ +E+DGKRI
Sbjct: 2 PASSAA-YDMQVKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRI 60
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD SF +IRNWI I+QHA +VNKI
Sbjct: 61 KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKI 120
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD- 183
LVGNK DM + K V T +GQ LA E+G+ F+E SAK ++NVE F +IAR +K RL
Sbjct: 121 LVGNKCDMLDEK-VVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKD 179
Query: 184 -TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ + +++ + D A G R CC
Sbjct: 180 GGGAGPAKKGVQLGRNDPAAG-----NRKGCC 206
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 153/195 (78%), Gaps = 1/195 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+CLL RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ +F+NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D+ E KR VP +G+++A E+GI F ETSAK+N+NVE+ F +A+ I + D+
Sbjct: 122 NKCDI-EDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKDAD 180
Query: 188 AEPQTIKINQPDQAG 202
+ + I++ + G
Sbjct: 181 GHNKAVDIHKSESKG 195
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 152/204 (74%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I ++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEINRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ++R V G+ AD GI F ETSAK NVEE F ++A +IK+R+A +
Sbjct: 124 DL-TTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNTG 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++ +N GG+ ++ CC
Sbjct: 183 KSGTVN----VGGSQPIPPKTGCC 202
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 160/212 (75%), Gaps = 11/212 (5%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A +YDYL KLLLIGDS VGKSCLLLRF+D ++ ++I+TIG+DFKIRT+ELDGK +KLQ
Sbjct: 2 ASIEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASD+V K+LVG
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D+ +SK V T + +ALAD G+ F ETSAK ++NVE+ F +++ +IK+R+A +
Sbjct: 122 NKCDLVDSK-VVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSSEIKKRMATQPAA 180
Query: 188 AEPQTIKIN---QPDQAGGAAQAAQRSACCGS 216
T+ ++ QP Q ++S+CC S
Sbjct: 181 ERKPTVHLHGKGQPIQ-------QEKSSCCSS 205
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 158/208 (75%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D +++ ++I+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF+N++ W+ IE++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQWLTEIERYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL----ADTDS 186
D+ +SK+ V + +A ADE GI F ETSAK+ NVE+ F ++A +IK R+ A D+
Sbjct: 124 DL-QSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEIKARMGPAGASNDT 182
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSACC 214
++K +P +GG CC
Sbjct: 183 SKGTVSMKAGKPVSSGGG-------GCC 203
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SKRAV + + AD+ GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 124 DL-TSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMGPVQQAGTG 182
Query: 191 QTIKINQPDQAGGAAQAAQR--SACC 214
+++I GG+ ++ CC
Sbjct: 183 PSVRI------GGSQPVNEKKTGGCC 202
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 152/207 (73%), Gaps = 9/207 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL+GKRIKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGILLVYD+T+ SF NI W+RNIE+HA+++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E R V +KG+ + E+ I+FFETSAK N+N+E+ F ++A D+ + +
Sbjct: 122 NKCDM-EDVRVVSKAKGEQIVSEHNIRFFETSAKANINIEKAFLTLAEDVLHKTPGKEPT 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
E + N+ +GG CC
Sbjct: 181 NENVDVN-NRSGSSGGV-------RCC 199
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 157/205 (76%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD SF N++ W+ IE++A DNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ++K+ V T+ LA++ GI F ETSAK NVE+ F ++A +IK R+ S A+P
Sbjct: 124 DL-QTKKRVDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAADP 182
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI++ G +A +S CC
Sbjct: 183 PSAVKIDK----GRNVEA--KSGCC 201
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N+N+E F +A I + + +S
Sbjct: 122 NKCDMTD-KRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
+ + I++ +Q +A S CC
Sbjct: 181 ENQERVIIDRRNQ----EKAPGYSKCCA 204
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 152/208 (73%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF N++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ RAV +A ADE GI F ETSAK NVE+ F ++ DIK R+A + A
Sbjct: 124 DL--PNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQPANNAR 181
Query: 190 PQTIKIN-QPDQAGGAAQAAQRSACCGS 216
P T+++ QP Q+ CC S
Sbjct: 182 PPTVQLQGQP--------VNQKGGCCSS 201
>gi|403362358|gb|EJY80906.1| Ras-related gtp-binding protein [Oxytricha trifallax]
Length = 224
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
+DYLIKL+LIGDSGVGK+C LLRF+D +FT+S I+TIGIDFKI+TI +DGK +KLQIWDT
Sbjct: 8 FDYLIKLILIGDSGVGKTCFLLRFADDNFTSSHISTIGIDFKIKTINIDGKNVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT YY+GAMGI+L YD T E SFNN+RNW+R IE HAS NV KIL+GNKAD
Sbjct: 68 AGQERFRTITQTYYKGAMGIILAYDCTSEDSFNNVRNWVRQIEVHASSNVEKILIGNKAD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+ + K+ + T +G ALA E+ +KFFETSA+T NV E FF I++ IK +
Sbjct: 128 LTD-KKVIDTEQGMALAKEFNMKFFETSARTGHNVNETFFEISKCIKDK 175
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + ++
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQQSGCCSS 202
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMAD-KKVVDYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGTTTTNNSK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++++ P Q G+ Q+ ++CC
Sbjct: 183 PSVQVG-PGQGVGSNQS---NSCC 202
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 155/211 (73%), Gaps = 9/211 (4%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IK
Sbjct: 2 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTIT++YYRGA GI++VYD+TD+ +FNN++ W++ I+++A +NVNK+L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+ +KRAV T Q A + GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 122 VGNKCDL-TAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQ 180
Query: 186 SRAEPQTIKI--NQPDQAGGAAQAAQRSACC 214
++I +QP Q + CC
Sbjct: 181 GAGGAPGVRITGSQP------VQDKKSGGCC 205
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 152/209 (72%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + R V + AD+ GI F ETSAK NVE F ++A IK R+A S A
Sbjct: 124 DL-TANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+ CC S
Sbjct: 183 RPPTVQIRGQP--------VGQKGGCCSS 203
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 155/211 (73%), Gaps = 9/211 (4%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IK
Sbjct: 1 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 60
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTIT++YYRGA GI++VYD+TD+ +FNN++ W++ I+++A +NVNK+L
Sbjct: 61 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLL 120
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+ +KRAV T Q A + GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 121 VGNKCDL-TAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQ 179
Query: 186 SRAEPQTIKI--NQPDQAGGAAQAAQRSACC 214
++I +QP Q + CC
Sbjct: 180 GAGGAPGVRITGSQP------VQDKKSGGCC 204
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 153/206 (74%), Gaps = 4/206 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LDGK IKLQIW
Sbjct: 3 AEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKTIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDVESFNNVKTWLSEIDKYASENVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA- 188
+D+ +K+AV + AD GI F ETSAK + NVEE F +A DIK R+A A
Sbjct: 123 SDL-IAKKAVDPGMAKEFADSLGIPFLETSAKNSTNVEEAFIRMATDIKSRVAAQGPGAG 181
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
P +K+ P A Q + CC
Sbjct: 182 RPGGVKL--PASGERAQQKKKEDGCC 205
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N+N+E F +A I + + +S
Sbjct: 122 NKCDMTD-KRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
P+ + I++ + +A + CC
Sbjct: 181 ENPERVVIDRRNN----DKAPGYNKCCA 204
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 151/209 (72%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF D S+ S+I+TIG+DFKIRT+E D K IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAV + AD+ GI F ETSAK NVE+ F +++ IK R+A S
Sbjct: 124 DL-TANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNG 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VGQKSGCCSS 203
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 12/207 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 129
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--AEP 190
+K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A P
Sbjct: 130 TANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARP 188
Query: 191 QTIKI-NQPDQAGGAAQAAQRSACCGS 216
T++I QP Q+S CC S
Sbjct: 189 PTVQIRGQP--------VNQKSGCCSS 207
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 159/208 (76%), Gaps = 10/208 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM+E KR V T KG+A+A E+GI+F ETSAK N+N++ F +A I L T R
Sbjct: 122 NKSDMEE-KRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAI---LDKTHGR 177
Query: 188 AEPQTIKINQPDQAGGAAQAAQRS-ACC 214
EPQ + PD+ + + S CC
Sbjct: 178 -EPQ----DAPDRVTVDRRVERNSNRCC 200
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 12/207 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--AEP 190
+K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A + A P
Sbjct: 121 TANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARP 179
Query: 191 QTIKI-NQPDQAGGAAQAAQRSACCGS 216
T++I QP Q+S CC S
Sbjct: 180 PTVQIRGQP--------VNQKSGCCSS 198
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 158/208 (75%), Gaps = 10/208 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E KR V T KG+A+A E+GI+F ETSAK N+N+++ F +A + + D
Sbjct: 122 NKSDM-EDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELA----EAILDKTHG 176
Query: 188 AEPQTIKINQPDQAGGAAQAAQRS-ACC 214
EPQ + PD+ + + S CC
Sbjct: 177 KEPQ----DAPDRVTVDRRVERNSNRCC 200
>gi|384490321|gb|EIE81543.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 158
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/150 (79%), Positives = 128/150 (85%), Gaps = 1/150 (0%)
Query: 26 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 85
VGKSCLLLRFSD SFT SFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY
Sbjct: 5 VGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 64
Query: 86 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQ 145
RGAMGILLVYD TDE SF N+RNW NIEQHAS+ VNKIL+GNK DM E KR + +G+
Sbjct: 65 RGAMGILLVYDTTDEKSFGNVRNWFSNIEQHASEGVNKILIGNKCDM-EDKRVISKEQGE 123
Query: 146 ALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
ALA E GI+F ETSAK N+ VEE FF +AR
Sbjct: 124 ALASELGIQFMETSAKANIGVEEAFFDLAR 153
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 152/204 (74%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF+N++ W+ I+++ASDNV KILVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYASDNVVKILVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ S + V + +A ADE GI F ETSAK + NVE+ F ++A +IK+R+A ++P
Sbjct: 124 DL-TSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKRVA-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ Q+S CC
Sbjct: 178 ASNATRPTTVPXRXXXXXQKSNCC 201
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T + E
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNEK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+++++ G ++ CC
Sbjct: 183 RSVQVG----PGQNVSSSPSGGCC 202
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 156/211 (73%), Gaps = 12/211 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDES+F N++ W++ IE++A + VNK+LVGNKA
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQWLQEIERYACEGVNKLLVGNKA 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA------DT 184
D+ SK AV + LADE GI F +TSAK NVE+ F ++A+ IK R+ +
Sbjct: 127 DLTNSK-AVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVSAMQNGS 185
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRS-ACC 214
A T+K+ Q G QA+ S CC
Sbjct: 186 AGGAGKSTLKVGQ----GQNVQASSNSGGCC 212
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A YD IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ +E+DGKRIKLQIW
Sbjct: 5 APYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQIW 64
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTITT+Y+RGA GILLVYDVTD SF +IRNWI I+QHA +VNKILVGNK
Sbjct: 65 DTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNK 124
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
DM + K V T +GQ LA E+G+ FFE SAK ++NVE+ F IAR +K R+
Sbjct: 125 CDMLDEK-VVSTEEGQKLAKEFGVDFFECSAKNDINVEQSFLGIARSVKDRMV 176
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 154/209 (73%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + K+ V +A ADE GI F ETS K LNV + F +++ IK R+A + A
Sbjct: 124 DLTD-KKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQPAANNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+ +CC S
Sbjct: 183 RPATVQIRGQP--------VEQKGSCCSS 203
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 160/212 (75%), Gaps = 20/212 (9%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN+++W++ I+++A++NV+K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKT 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V +G+ LAD+ G+ F ETSAK + NVE+ F ++ +IK R+ + P
Sbjct: 124 DL-TSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRV-----KTAP 177
Query: 191 QTIKINQPDQAGGAA------QAAQ--RSACC 214
QP+++G A Q A +S CC
Sbjct: 178 ------QPNRSGAGAARLRPGQPAHGNQSGCC 203
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 39 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 98
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 99 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 158
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 159 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 217
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 218 EKSNVKIQSTPVKQSGG--------GCC 237
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 155/210 (73%), Gaps = 14/210 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++ S+I+TIG+DFKIRT+E DGK IKL+IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNKILVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKILVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ + R V +A ADE GI F ETSAK NVE+ F ++ IK R+A + A
Sbjct: 124 DL-TANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNSA 182
Query: 189 EPQTIKI-NQP-DQAGGAAQAAQRSACCGS 216
+P T+ I QP Q+GG CC S
Sbjct: 183 KPPTVNIRGQPVTQSGG---------CCSS 203
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 152/205 (74%), Gaps = 8/205 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD +KLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ +E+DGKRIKLQIWDT
Sbjct: 7 YDMQVKLLMIGDSGVGKTCLLLRYANESFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDT 66
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITT+Y+RGA GILLVYDVTD SF +IRNWI I+QHA +VNKILVGNK D
Sbjct: 67 AGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCD 126
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAE 189
M + K V T +GQ LA E+G+ F+E SAK ++NVE F +IAR +K RL +
Sbjct: 127 MLDEK-VVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDGGGAGPA 185
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ +++ + D A G R CC
Sbjct: 186 KKGVQLGRNDPAAG-----NRKGCC 205
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 150/171 (87%), Gaps = 1/171 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RFS+ SF +++I+TIGIDFKIRT E++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE S+ NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENASAGVERMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
M E+KR VP +G+ LA E+GI+FFETSAK++LNV+E F ++A DI +++
Sbjct: 125 M-ENKRKVPKERGEKLAKEHGIRFFETSAKSSLNVDESFNTLATDILMKIS 174
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 154/207 (74%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
AR YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A ++GI+F ETSAK N++V+ F+ +A I ++ D+
Sbjct: 122 NKCDMSD-RRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDE 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
TI QP + GG+ CC
Sbjct: 181 QSRDTINPVQPQRPGGSG------GCC 201
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD K IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ E+KRAV T + +A AD GI+F ETSAK NVE+ F +A IK R+
Sbjct: 124 DL-EAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRM 173
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 118
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 178
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 179 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 237
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 238 EKSNVKIQSTPVKQSGG--------GCC 257
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 48 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 107
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 108 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 167
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 168 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 226
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 227 EKSNVKIQSTPVKQSGG--------GCC 246
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 154/207 (74%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
AR YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A ++GI+F ETSAK N++V+ F+ +A I ++ D+
Sbjct: 122 NKCDMSD-RRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDSTEE 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
T+ QP + GG+ CC
Sbjct: 181 QSRDTVNPVQPQRTGGSG------GCC 201
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 157/215 (73%), Gaps = 25/215 (11%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLL RF+D ++ S+I+TIG+DFKIRT+EL+GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLSEIDRYANENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DL-TSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMA-------- 174
Query: 191 QTIKINQPDQAGGAAQAAQ-----------RSACC 214
+QP A GA++ A +S+CC
Sbjct: 175 -----SQPQAASGASRGATIRPGEGRPVNAKSSCC 204
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 151/190 (79%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL + + F+ GIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLELYLKTLSMSFFLFLAGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK+++NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM+E +R V T KG+A+A E+GI+F ETSAK N+N++ F +A + + D
Sbjct: 122 NKSDMEE-RRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELA----EAILDKTHG 176
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSA--CC 214
EPQ + PD+ + +RS+ CC
Sbjct: 177 KEPQ----DAPDRV-TVDRRVERSSNRCC 200
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 157/208 (75%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASD+V+K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDSVSKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
DM E KR V ++ ADE GI F ETSAK NVE+ F ++A ++K+R+A T+
Sbjct: 124 DMTE-KRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNR 182
Query: 189 EPQTIKIN-QP-DQAGGAAQAAQRSACC 214
+ TI++ QP Q GG +CC
Sbjct: 183 KANTIEMKGQPLPQRGG--------SCC 202
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 157/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N N+E F +A I + + ++
Sbjct: 122 NKCDMTD-KRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTSGKEAA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
P+ + I++ + +A S CC
Sbjct: 181 ENPERVVIDRRNN----DKAPGYSKCCA 204
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM+E KR V T KG+A+A E+GI+F ETSAK N+N++ F +A I + + +
Sbjct: 122 NKSDMEE-KRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQ 180
Query: 188 AEPQTIKINQP 198
+ +N P
Sbjct: 181 DAADRVTVNIP 191
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 155/210 (73%), Gaps = 14/210 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASD VNKILVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDGVNKILVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ + R V +A ADE GI F ETSAK NVE+ F ++ IK R+A ++ A
Sbjct: 124 DL-TANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNSA 182
Query: 189 EPQTIKI-NQP-DQAGGAAQAAQRSACCGS 216
+P T+ I QP Q+GG CC S
Sbjct: 183 KPPTVNIRGQPVTQSGG---------CCSS 203
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/187 (62%), Positives = 150/187 (80%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK+ NVE+ F ++A +IK+R+ T A
Sbjct: 124 DL-TTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAA 182
Query: 189 EPQTIKI 195
E +KI
Sbjct: 183 EKSNVKI 189
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 157/207 (75%), Gaps = 6/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD FTT+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F++I W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM+E KR V +G+A+A E+GI+F ETSAK N+N++ F +A I + A ++
Sbjct: 122 NKCDMEE-KRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTAGREAD 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
A+ I + + ++A ACC
Sbjct: 181 ADHSRIAVERR-----PSRAPPSRACC 202
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RFS+ SF+ ++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
M E KR V + + L E+GI+FFETSAK++LNVEE F ++ARDI R
Sbjct: 125 M-EVKRKVSRDQAEKLCREHGIRFFETSAKSSLNVEEAFNTLARDILLR 172
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 156/203 (76%), Gaps = 7/203 (3%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SF+N++ W++ I+++AS+NVNK+LVGNK+DM
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDM 128
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
E+K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ S A P
Sbjct: 129 -ETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVIS-ASPD- 185
Query: 193 IKINQPDQAGGAAQAAQRS-ACC 214
N+P A+ ++S CC
Sbjct: 186 ---NKPSVKINASNPVKQSGGCC 205
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI L+ K +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SF+N++ WI+ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SKR V + +G+ LAD YGIKF ETSAK NVE+ F ++A +IK+R+ + +
Sbjct: 124 DL-VSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQNTKG 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T + P AG AQ ++ CC
Sbjct: 183 VTQQ--GPKLAG--AQPIRQGGCC 202
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 152/206 (73%), Gaps = 13/206 (6%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKS LLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A++NVNK+LVGNK D+
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCDL 154
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
E KR V T +G+ AD GI+F ETSAKT+ NVE+ F ++A IK R+ + S A
Sbjct: 155 -EGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPATK 213
Query: 193 IKIN----QPDQAGGAAQAAQRSACC 214
+N Q + GG CC
Sbjct: 214 PGVNLRSQQVKKEGG--------GCC 231
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 159/215 (73%), Gaps = 8/215 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA +A YD L KLLLIGDSGVGK+C+L R++D +F T+FI+TIGIDFKI+TIEL+
Sbjct: 1 MAAQAVPKKA-YDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELE 59
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T++ SF+NI W++NIE HAS +
Sbjct: 60 GKRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASAD 119
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V +IL+GNK D E++R VP +G ALA GI F ETSAKTN N+EE F +A KQ
Sbjct: 120 VERILIGNKCDW-EARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLA---KQI 175
Query: 181 LADTDSRAEPQTI-KINQPDQAGGAAQAAQRSACC 214
L ++ E +T+ +N+ ++ + + S CC
Sbjct: 176 LRKVPAKKEDETVLDLNRSKKS--TEDSDKSSKCC 208
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 146/187 (78%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 41 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 100
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 101 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKC 160
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ +K V G+A ADE GI F ETSAK NV F ++A DIK R+A + A
Sbjct: 161 DLTANK-VVSYETGKAFADEIGIPFMETSAKNATNVXHAFMAMAADIKNRMASQPAMNSA 219
Query: 189 EPQTIKI 195
P T++I
Sbjct: 220 RPPTVQI 226
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+ V + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMSE-KKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGSTATNNTK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++++ AG CC
Sbjct: 183 PSVQVG----AGHGVSNNSSGGCC 202
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 151/187 (80%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK++ NVE+ F ++A +IK+R+ T +
Sbjct: 124 DL-TTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGAS 182
Query: 189 EPQTIKI 195
E +KI
Sbjct: 183 EKSNVKI 189
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATSGGA 185
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +KI Q+ Q++ CC
Sbjct: 186 EKSNVKI----QSTPVKQSS--GGCC 205
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +KRAV +A ADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DL-TAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPALNQG 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+P + +A S CC
Sbjct: 183 PKGATVRPGEGRPVGKA--NSQCC 204
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 161/208 (77%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+++V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLSEIDRYANESVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T G+ALADE GI F ETSAK ++NVE+ F ++A +IK+++ + + A+
Sbjct: 124 DLVENK-VVDTQTGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAGAKK 182
Query: 191 --QTIKIN-QPDQAGGAAQAAQRSACCG 215
T++I QP + Q+S CCG
Sbjct: 183 TGSTVQIKGQPIE--------QKSNCCG 202
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +KI Q+ Q++ CC
Sbjct: 186 EKSNVKI----QSTKVKQSS--GGCC 205
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+ RAV +A ADE GI F ETSAK NVE+ F ++A IK + +A
Sbjct: 124 DL-EANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIK-----IEWQANL 177
Query: 191 QTIKI-NQPDQAGGAAQ 206
QT++ N DQ AQ
Sbjct: 178 QTMQASNSADQGQPVAQ 194
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 7/210 (3%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A A YD IKLL+IGDSGVGK+CLLLR+++ SF+ +FITTIGIDFKI+ ++++G RIK
Sbjct: 4 ASNSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDVEGTRIK 63
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITT+Y+RGA GILLVYDVTD SF +IRNWI I+QHA +VNKIL
Sbjct: 64 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKIL 123
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADT 184
VGNK DM + K V T +GQ LA E+GI FFE SAK +++VE F IA+ +K RL AD
Sbjct: 124 VGNKCDMLDEK-VVSTEEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKDRLKADG 182
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+T +P+Q+GG + CC
Sbjct: 183 QGGPSAKTGLNLKPNQSGG-----KDKKCC 207
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 150/171 (87%), Gaps = 1/171 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RFS+ SF +++I+TIGIDFKIRT E++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE S+ NI+NW+++I+++A+ V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
M E+KR VP +G+ LA E+GI+FFETSAK++ NV+E F ++ARDI +++
Sbjct: 125 M-ENKRKVPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMKIS 174
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 149/204 (73%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ S
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG---SSIAT 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N G +Q CC
Sbjct: 180 NNTKANVNVSPGHGVSNSQSGGCC 203
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 158/208 (75%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+A+A E+GI+F ETSAK+N N+EE F +A+ I + + +S
Sbjct: 122 NKCDMTD-KRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRESA 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
+ + I++ + +A + CC
Sbjct: 181 ENQERVIIDRRNN----DKAPGYNKCCA 204
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +KI Q+ Q++ CC
Sbjct: 186 EKSNVKI----QSTPVKQSS--GGCC 205
>gi|464553|sp|P35281.1|RAB10_RAT RecName: Full=Ras-related protein Rab-10
gi|455344|gb|AAA41991.1| RAB10 [Rattus norvegicus]
Length = 200
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 151/207 (72%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TI IDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI+QHA+++V ++L+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLR 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD KR VP KG+ +A E+ I+FFETSAK N+N+E+ F ++ DI ++ +
Sbjct: 122 NKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ I+++A DNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIDRYACDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ S A+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLGIPFLETSAKNASNVEQAFMTMAAEIKNRVGPPSSAADQ 182
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G +S CC
Sbjct: 183 ASKVKIDQ-----GRPIETTKSGCC 202
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 150/181 (82%), Gaps = 2/181 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+ +L RFSD F SFI+TIGIDFKIR IE+DGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT E++F NI+ WIRN ++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIKTWIRNTDEHAAADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEP 190
M++ R V +G+ LA E+GIKF ETSA +++NVE+ F+++ARDIK+++ ++A+P
Sbjct: 125 MNDL-RQVSRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKEKMERKVAAQAQP 183
Query: 191 Q 191
+
Sbjct: 184 K 184
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DL-TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA 174
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 151/187 (80%), Gaps = 2/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + D+ GI F ETSAK NVE+ F ++A +IK R+ + +E
Sbjct: 127 DL-TTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVTAASEN 185
Query: 191 Q-TIKIN 196
+ ++KIN
Sbjct: 186 KPSVKIN 192
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 150/209 (71%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E D K IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAV + AD+ GI F ETSAK NVE+ F ++ IK R+A S
Sbjct: 124 DL-TANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANNG 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP +S CC S
Sbjct: 183 RPPTVQIRGQP--------VGPKSGCCSS 203
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 125 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 184
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 185 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 244
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T + +P
Sbjct: 245 MSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNKP 302
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+CLL RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E+KR V +G+A+A E+ I F ETSAK N+NVE+ F +A+ I + D+R
Sbjct: 122 NKCDM-ENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAILNKSPSRDTR 180
Query: 188 AEPQTI 193
E Q I
Sbjct: 181 PEGQVI 186
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G RS CC
Sbjct: 186 ASKVKIDQ-----GRPVENTRSGCC 205
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 143/173 (82%), Gaps = 1/173 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YDYL KLLLIGDSGVGK+CLL RFSD +F T+FI+TIGIDFKI+T+E+DGK+IKLQ
Sbjct: 2 AKKAYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T E +F+NI W+RNI++HAS+ V ++++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIDEHASEGVERMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
NK DM++ KR KG+ +A E+ IKF+ETSAK N+ VEE F + +DI ++
Sbjct: 122 NKCDMND-KRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRK 173
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E KR V T +G+A+A E+GI+F ETSAK N+N++ F +A I ++ + +
Sbjct: 122 NKSDM-EDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQ 180
Query: 188 AEPQTIKINQ 197
P + +++
Sbjct: 181 DAPDRVTVDR 190
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 157/206 (76%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI L+ K +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SF+N++ WI+ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA--DTDSRA 188
D+ SKR V + +G+ LAD +GIKF ETSAK NVE+ F ++A +IK+R+ ++R
Sbjct: 124 DL-VSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNSQNTRG 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
Q P AG AQ ++ CC
Sbjct: 183 SAQ----QGPKLAG--AQPIRQGGCC 202
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIE D K IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYAAENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ +KR V T +G+ AD GI+F ETSAKT+ NVE+ F ++A IK R+
Sbjct: 124 DLT-AKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARM 173
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 155/206 (75%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +K A ++A + CC
Sbjct: 186 EKSNVKFR-------ALRSAVKWRCC 204
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ T + +P
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQIKERMGTTTANTKP 182
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 157/191 (82%), Gaps = 6/191 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFK++TIE+DGK++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V+++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP- 190
+ E+KR V G+ LA ++GI+FFETSAK+++NVEE F ++ARDI L + + P
Sbjct: 125 I-EAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDI---LKQSSKKPGPG 180
Query: 191 -QTIKINQPDQ 200
Q +KI +
Sbjct: 181 GQQVKITSSTE 191
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 151/204 (74%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 124 DMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSTTANNTK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
++++ G + CC
Sbjct: 183 PSVQVG----PGHGVSSNSGGGCC 202
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A++ GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G RS CC
Sbjct: 186 ASKVKIDQ-----GRPVENNRSGCC 205
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 25 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 84
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 85 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 144
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+AV + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 145 M-EDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 202
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 150/187 (80%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +++ V + + AD GI F ETSAK+ NVE+ F ++A +IK+R+ T A
Sbjct: 124 DL-TTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAA 182
Query: 189 EPQTIKI 195
E +KI
Sbjct: 183 EKSNVKI 189
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 151/209 (72%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KL LIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E D K IKLQIWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVG+K
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGSKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + RAV + AD+ GI F ETSAK NVE+ F +++ IK R+A S
Sbjct: 124 DL-TANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNG 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 RPPTVQIRGQP--------VGQKSGCCSS 203
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+AV + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 155/208 (74%), Gaps = 5/208 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+++A E+ I+F ETSAK N+N+E F +A I + + ++
Sbjct: 122 NKCDMTD-KRVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTSGKETT 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
P + +N+ G + ACC
Sbjct: 181 DNPDRVVVNR----GTGDKPPAYKACCA 204
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 9/205 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 153
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAE 189
+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T AE
Sbjct: 154 L-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 212
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+KI Q+ Q++ CC
Sbjct: 213 KSNVKI----QSTPVKQSS--GGCC 231
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
P A A YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 15 PYANDLARYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 74
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
+KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK
Sbjct: 75 VKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNK 134
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
+LVGNK+DM E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+
Sbjct: 135 LLVGNKSDM-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGT 193
Query: 184 TDSRAEP 190
+P
Sbjct: 194 ATVNNKP 200
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 153/200 (76%), Gaps = 4/200 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + ++
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 PQTIKI-NQP-DQAGGAAQA 207
P T++I QP +Q G A +
Sbjct: 183 PPTVQIRGQPVNQQSGCASS 202
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ T + +
Sbjct: 124 SDL-TSKKVVEYSVAKDFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTASG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P P Q + Q CC
Sbjct: 183 PGKTSTVTPGQ---SVQQQASGGCC 204
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 155/207 (74%), Gaps = 9/207 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRT+T++YYRGA GI++VYDVTD+ SF+N++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V S + A I F ETSAK + NVE+ F ++A +IK RLA ++P
Sbjct: 124 DL-TSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIKNRLA-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRS--ACCG 215
T + QP A + +S CCG
Sbjct: 178 ITTQ-QQPSLGITPAPSKPQSNGGCCG 203
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 68 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+AV + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 128 M-EDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 185
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 149/212 (70%), Gaps = 9/212 (4%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A +R YD +KLLL+GDSGVGKSCLLLRF D SF SFITTIGIDFKIRT+E++GK
Sbjct: 2 ASRGTSRQQYDLTMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEINGK 61
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
++KLQIWDTAGQERFRTITTAYYRGAMGI+LVYDVTDE SFN++ NW + + QHA+++
Sbjct: 62 KVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHNWYQTLNQHANEDAQ 121
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
LVGNK D DE R V +G+ LA E G+ F E SAK+N NV+ +F +A+ ++++
Sbjct: 122 LFLVGNKCD-DEESRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEKMR 180
Query: 183 DTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+T I +N + +S+CC
Sbjct: 181 NTQQGPGSAGIDVNSSNDT--------KSSCC 204
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 150/204 (73%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +KR V T + A+ GI+F ETSAK NVE+ F +A IK+R+A+ P
Sbjct: 124 DL-TAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANA-----P 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K G + S CC
Sbjct: 178 VAPKAGVKLTPGQQVPSNGGSKCC 201
>gi|413945631|gb|AFW78280.1| hypothetical protein ZEAMMB73_175315 [Zea mays]
Length = 147
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/148 (83%), Positives = 126/148 (85%), Gaps = 22/148 (14%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITT +IRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITT----------------------DIRNWIRNIEQHASDNVNKILVGNKA 108
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
DMDESKRAVPT+KGQALADEYGIKFFET
Sbjct: 109 DMDESKRAVPTAKGQALADEYGIKFFET 136
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 153/204 (75%), Gaps = 3/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT++L+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V +A ADE GI F ETSAK NVEE F +A +IK R+A +
Sbjct: 124 DL-TAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKMAGEIKNRMASQPALNNG 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+P + G A +S CC
Sbjct: 183 PKGATVRPGE--GRPVNANKSNCC 204
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 151/206 (73%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGG 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +K+ G CC
Sbjct: 183 EKPNVKLTP-----GTTVKTSSGGCC 203
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G RS CC
Sbjct: 186 ASKVKIDQ-----GRPVENTRSGCC 205
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ ++I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASD+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +SK V T + +A A+ GI F ETSAK ++NVEE F +++ DIK+R+A +
Sbjct: 124 DLVDSK-VVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSSDIKKRMATQPAVERK 182
Query: 191 QTIKIN---QPDQ 200
T+ I+ QP Q
Sbjct: 183 PTVHIHMRGQPIQ 195
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 36 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 95
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 96 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 155
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+AV + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 156 M-EDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 213
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 146/190 (76%), Gaps = 1/190 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA A YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD
Sbjct: 1 MAETVVAAGGLYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++
Sbjct: 61 GKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEG 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R
Sbjct: 121 VNKLLVGNKSDMAD-KKVVEYTMAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKER 179
Query: 181 LADTDSRAEP 190
+ T +P
Sbjct: 180 MGTTTVNNKP 189
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 157/207 (75%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A+++GI+F ETSAK N+ +++ F+ +A I ++ + +
Sbjct: 122 NKCDMAD-RRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPNKEEN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
A+ TI+ P +G + R CC
Sbjct: 181 AKQPTIR---PVDSGA---STGRVGCC 201
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 28 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 87
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 88 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 147
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M + K+ V + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ T + +P
Sbjct: 148 MAD-KKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQIKERMGTTTANTKP 205
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ T +
Sbjct: 124 SDL-TSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTST--- 179
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + G Q Q S CC
Sbjct: 180 PSGTGKSSTITPGQTVQQQQASGCC 204
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 151/206 (73%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGG 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +K+ G CC
Sbjct: 183 EKPNVKLTP-----GTTVKPSSGGCC 203
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 152/206 (73%), Gaps = 11/206 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 144
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAEPQ 191
S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + ++P
Sbjct: 145 -TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPP 203
Query: 192 TIKI-NQPDQAGGAAQAAQRSACCGS 216
T++I QP Q+S CC S
Sbjct: 204 TVQIRGQP--------VNQQSGCCSS 221
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G +S CC
Sbjct: 186 ASKVKIDQ-----GRPVENTKSGCC 205
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T +
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACC 214
E + I + P ++ G CC
Sbjct: 183 EKSNVNIQSTPVKSSGG-------GCC 202
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK+ NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMG 174
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 159/216 (73%), Gaps = 5/216 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA ++ YDYLIKL+LIGDSGVGKS LLLRFSD SF + TIGIDFK+RTIELD
Sbjct: 1 MAGAGGKSMGSYDYLIKLMLIGDSGVGKSSLLLRFSDDSFDMNCTPTIGIDFKLRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+IKLQ+ DTAGQERF+TITTA+YR AMGILLVYD+T+E SF NI W++NIE+H S
Sbjct: 61 GKKIKLQLLDTAGQERFKTITTAHYRNAMGILLVYDITNEQSFKNIEEWLKNIEKHTSQP 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKIL+GNK D+ ++R V T +G+ LA++ + F+ETSAK V+E FF++ RDIK+R
Sbjct: 121 VNKILIGNKTDLG-AQRKVSTEEGRKLAEQLNMAFYETSAKDKSMVDEAFFALTRDIKKR 179
Query: 181 LADTDS-RAEPQTIKINQPDQAGGAAQAAQRSACCG 215
L + T+++++ ++ ++ A ++ +C G
Sbjct: 180 LGEHPGPNKSTGTVQVSKQEE---SSSAGKKKSCGG 212
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E +R V T +G+A+A E+GI+F ETSAK N+N++ F +A I ++ + +
Sbjct: 122 NKSDM-EDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQ 180
Query: 188 AEPQTIKINQ 197
P + +++
Sbjct: 181 DAPDRVTVDR 190
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD ++ N++ W++ I+++ASDNVNK+LVGNK+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQWLQEIDRYASDNVNKLLVGNKS 124
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D K V + A + GI F ETSAKT LNVE+ F ++AR+IK+R T ++A
Sbjct: 125 DRTNEK-VVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIKERTG-TATKANK 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+ + G A Q+ CC
Sbjct: 183 DTV----VPKEGQALQSNSGGNCC 202
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 141/172 (81%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 178
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K V G+A ADE GI F ET AK NVE+ F ++A DIK R+A
Sbjct: 179 DLTANK-VVSYETGKAFADEIGIPFMETGAKNATNVEQAFMAMAADIKNRMA 229
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 149/169 (88%), Gaps = 1/169 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFK++TI++DGK++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V+++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+ E+KR V G+ LA ++GI+FFETSAK+++NVEE F S+A DI Q+
Sbjct: 125 I-EAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQK 172
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 150/204 (73%), Gaps = 6/204 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LD K IKLQIW
Sbjct: 3 AEYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ I+++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ +K+AV T + AD GI F ETSAK + NVEE F +A IK RLA
Sbjct: 123 CDL-VTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKTRLA-----VS 176
Query: 190 PQTIKINQPDQAGGAAQAAQRSAC 213
+T +++P+ A + + C
Sbjct: 177 GETKSVSRPNLQNPPAPKKEDNCC 200
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ S
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG---SSIAT 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N G Q CC
Sbjct: 180 NNTKANVNVAPGHGVSNNQSGGCC 203
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 156/209 (74%), Gaps = 9/209 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A +DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQ
Sbjct: 2 AAQQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVG
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TD 185
NK D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T
Sbjct: 122 NKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 180
Query: 186 SRAEPQTIKINQPDQAGGAAQAAQRSACC 214
AE +KI Q+ Q++ CC
Sbjct: 181 GGAEKSNVKI----QSTPVKQSS--GGCC 203
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
P+ YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +
Sbjct: 973 PSLTYHRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTV 1032
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+
Sbjct: 1033 KLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKL 1092
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
LVGNK+DM E K+ V + + AD GI F ETSAK+ NVE+ F ++AR IK+R+
Sbjct: 1093 LVGNKSDM-EDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTA 1151
Query: 185 DSRAEP 190
+P
Sbjct: 1152 TVNNKP 1157
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 68
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 69 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 128
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+AV + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 129 M-EDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 186
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 906 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 965
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 966 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 1025
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+AV + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 1026 M-EDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 1083
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 9/204 (4%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYD+TD+ +FNN++ W++ I+++A +NVNK+LVGNK D+
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDL 124
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+KRAV T Q A + GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 125 -TAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAPG 183
Query: 193 IKI--NQPDQAGGAAQAAQRSACC 214
++I +QP Q + CC
Sbjct: 184 VRITGSQP------VQDKKSGGCC 201
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 156/207 (75%), Gaps = 5/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E +R V +G+ +A+++GI+F ETSAK N+ +++ F+ +A I ++ +
Sbjct: 122 NKCDMAE-RRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNEG 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ TI+ +P + A R +CC
Sbjct: 181 MKQPTIRPAEPQ----SNVAIGRLSCC 203
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI+F ETSAK NVE+ F ++AR IK+R+ +T +P
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKP 182
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA-E 189
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A +
Sbjct: 127 DL-HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASD 185
Query: 190 P-QTIKINQPDQAGGAAQAAQRSACC 214
P +KI G + +S CC
Sbjct: 186 PANKVKIEH-----GRPIESSKSGCC 206
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIW
Sbjct: 6 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIW 65
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNK 125
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S
Sbjct: 126 CDL-HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSS 181
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 154/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQ WD
Sbjct: 55 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQRWD 114
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 115 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 174
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 175 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 233
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 234 EKSNVKIQSTPVKQSGG--------GCC 253
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 153/210 (72%), Gaps = 11/210 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+++DGK IKLQIWD
Sbjct: 4 EYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ I++ AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKFASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA-- 188
D+ +K+AV T Q AD GI F ETSAK + NVE F +A++IK+R+A + +
Sbjct: 124 DL-VTKKAVDTQMAQEFADSLGIPFLETSAKESSNVETAFIEMAKNIKKRVAAQGANSGA 182
Query: 189 ----EPQTIKINQPDQAGGAAQAAQRSACC 214
P N+P G Q+S CC
Sbjct: 183 TAGGRPLLTGNNRPATNSG----GQKSGCC 208
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 154/208 (74%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 DYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSR 187
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ + +R
Sbjct: 124 DLVENK-VVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPNATAR 182
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
+ QP Q Q S CCG
Sbjct: 183 SSSTVQMKGQPIQ--------QNSNCCG 202
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 147/169 (86%), Gaps = 1/169 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ ++ T++I+TIGIDFK++TIE+DGK++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I ++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+ E+KR V G+ LA E+ I+FFETSAK+++NVEE F ++ARDI Q+
Sbjct: 125 V-EAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQK 172
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+AV + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 143/175 (81%), Gaps = 4/175 (2%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
P+RA YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE+DGKRI
Sbjct: 6 PSRA---YDSILKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRI 62
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQ+WDTAGQERFRTITTAYYRGA GI+LVYDVTDE +F N+RNW + + QHA+++ I
Sbjct: 63 KLQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHANEDTQLI 122
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 179
LVGNK D ++ RAV + +G++LA E GI F E SAKTN NV+E+FF +A+ I++
Sbjct: 123 LVGNKND-EKDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQE 176
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 154/206 (74%), Gaps = 11/206 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ E+K V T +A ADE GI F ETSAK + NVE+ F ++A +IK+++ T S++
Sbjct: 124 DLVENK-VVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKS 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
QP Q Q+S+CC
Sbjct: 183 SGNVQMKGQPIQ--------QKSSCC 200
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 154/206 (74%), Gaps = 5/206 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDS VGKSCLLLRF+D ++ ++I+TIG+DFKIRT+ELDGK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASD+V K+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ +SK V T + +A A+ G+ F ETSAK ++NVE F +++ +IK ++A +
Sbjct: 124 CDLVDSK-VVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPAAER 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCG 215
T+ ++ G Q+S+CC
Sbjct: 183 KSTVHVHMK----GQPIQQQQSSCCS 204
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 149/183 (81%), Gaps = 4/183 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+ +L RFSD F SFI+TIGIDFKIR IE+DGK+IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT E++F NI+ WIRN ++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHAAADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA--RDIKQRLA-DTDSRA 188
M+E R V +G+ LA E+ IKF ETSA +++NVEE F+++A RDIK+++ +RA
Sbjct: 125 MNEL-RQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLAXXRDIKEKMERKVAARA 183
Query: 189 EPQ 191
+P+
Sbjct: 184 QPK 186
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 148/187 (79%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQER RTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKI 195
E +KI
Sbjct: 186 EKSNVKI 192
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD FTT+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F++I W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR V +G+A+A E+GI+F ETSAK+N N+E F +A I + A ++
Sbjct: 122 NKCDM-EDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILDKSAGREAE 180
Query: 188 AEPQTIKI 195
A+ I +
Sbjct: 181 ADLARIAV 188
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 155/207 (74%), Gaps = 5/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 25 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 84
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+L+G
Sbjct: 85 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLLG 144
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E +R V +G+ +A+++GI+F ETSAK N+ +++ F+ +A I ++ +
Sbjct: 145 NKCDMAE-RRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNEG 203
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ TI+ +P A R +CC
Sbjct: 204 MKQPTIRPAEPQN----NVAIGRLSCC 226
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 152/209 (72%), Gaps = 6/209 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
++ YD L K+LLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 SKKTYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T SF NI WIRNI++HAS +V KI++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINKWIRNIDEHASKDVEKIILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D + KR V S+ + LA + I+F ETSAKTN+N++ F +A DI ++ S+
Sbjct: 122 NKVD-EADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRSQ 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCGS 216
A +TI I Q + Q+ CCGS
Sbjct: 181 A-SETISI----QNHSRPNSNQKRGCCGS 204
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
P + YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 3 PECCPQPPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 62
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
+KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK
Sbjct: 63 VKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNK 122
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
+LVGNK+DM E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+
Sbjct: 123 LLVGNKSDM-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGT 181
Query: 184 TDSRAEP 190
+P
Sbjct: 182 ATVNNKP 188
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
Query: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKL 66
R +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKL
Sbjct: 17 RGSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 76
Query: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILV 126
QIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV
Sbjct: 77 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLV 136
Query: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
GNK D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 137 GNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG 191
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 154/206 (74%), Gaps = 7/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWD
Sbjct: 40 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 99
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N++ W+ I+++A + VNK+LVGNK+
Sbjct: 100 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLHEIDRYACEGVNKLLVGNKS 159
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT--DSRA 188
D+ + K+ V + + AD+ I F ETSAK+ NVE+ F ++A+ IK R T ++ +
Sbjct: 160 DLTQ-KKVVEYTVAKDFADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTVNTGS 218
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
T+K+ AG Q Q S CC
Sbjct: 219 NKATLKVG----AGQNVQQQQSSGCC 240
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 150/205 (73%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V S + AD+ GI F ETSAK NVE+ F ++A+ IK R+ T + A
Sbjct: 124 SDL-TSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTTAAG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P Q Q CC
Sbjct: 183 TGKSSTITPGQ---TVQQQAAGGCC 204
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
Query: 5 PARARAD----YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
P R D YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD
Sbjct: 19 PERTPTDELNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD 78
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++
Sbjct: 79 GKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEG 138
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R
Sbjct: 139 VNKLLVGNKSDMSD-KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKER 197
Query: 181 LADTDSRAEP 190
+ T + +P
Sbjct: 198 IGTTTANNKP 207
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G +S CC
Sbjct: 186 ASKVKIDQ-----GRPVENTKSGCC 205
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 148/166 (89%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFK++TIE++GK++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE S+ NI+NW+++I+++AS V+++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
+ E+KR V G+ LA E+GI+FFETSAK+++NVEE F S+ARDI
Sbjct: 125 I-EAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDI 169
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 153/207 (73%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSC+LLRF+D ++T SFI+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+NN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL---ADTDSR 187
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ A S
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSE 182
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
I+ Q+GG CC
Sbjct: 183 KPDLKIESTPVQQSGG--------GCC 201
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 153/206 (74%), Gaps = 13/206 (6%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 121
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEP 190
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T AE
Sbjct: 122 -TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 180
Query: 191 QTIKINQP--DQAGGAAQAAQRSACC 214
+KI Q+GG CC
Sbjct: 181 SNVKIQSTPVKQSGG--------GCC 198
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S ++
Sbjct: 127 DL-HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGNSD 185
Query: 190 P-QTIKINQPDQAGGAAQAAQRSACC 214
P +KI G + +S CC
Sbjct: 186 PANKVKIEH-----GRPIESSKSGCC 206
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 153/206 (74%), Gaps = 13/206 (6%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEP 190
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T AE
Sbjct: 129 -TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 191 QTIKINQP--DQAGGAAQAAQRSACC 214
+KI Q+GG CC
Sbjct: 188 SNVKIQSTPVKQSGG--------GCC 205
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 151/179 (84%), Gaps = 7/179 (3%)
Query: 4 PPA-----RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE 58
PPA A+A YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++
Sbjct: 18 PPALLVSAMAKA-YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVD 76
Query: 59 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS 118
+DGK+IKLQ+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS
Sbjct: 77 IDGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS 136
Query: 119 DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
V ++L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 137 AGVERLLLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 194
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRT+T++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 153/206 (74%), Gaps = 13/206 (6%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEP 190
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T AE
Sbjct: 121 -TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 179
Query: 191 QTIKINQP--DQAGGAAQAAQRSACC 214
+KI Q+GG CC
Sbjct: 180 SNVKIQSTPVKQSGG--------GCC 197
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G +S CC
Sbjct: 186 ASKVKIDQ-----GRPVENTKSGCC 205
>gi|389612086|dbj|BAM19568.1| ras-related protein Rab-8, partial [Papilio xuthus]
Length = 211
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+ +L RFS+ +F SFI+TIGIDFKIRTI+LDGK++KLQIWDT
Sbjct: 5 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRG+MGI+LVYDVT+E SF NI+N IRNIE++AS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNGIRNIEENASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+D+ KR V +G+ LA +Y IKF ETSAK +LNVE F+++ARDIK ++ + P
Sbjct: 125 LDD-KRQVSKERGEQLAIDYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 154/206 (74%), Gaps = 7/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDRYAAEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT--DSRA 188
D+ + K+AV T + + AD I ETSAK NVE+ F ++A+ IK R+ + +
Sbjct: 124 DLVD-KKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQIKDRMGSSMQQQQQ 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
T+++ Q G A Q Q CC
Sbjct: 183 NKSTVRVGQ----GAAVQPQQSGGCC 204
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 152/198 (76%), Gaps = 7/198 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
+ APP + DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD
Sbjct: 125 LGAPPGCS----DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD 180
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+N
Sbjct: 181 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASEN 240
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R
Sbjct: 241 VNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 299
Query: 181 LAD--TDSRAEPQTIKIN 196
+ T AE +KI
Sbjct: 300 MGPGATAGGAEKSNVKIQ 317
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA-E 189
D+ +K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A +
Sbjct: 127 DL-HTKKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASD 185
Query: 190 P-QTIKINQPDQAGGAAQAAQRSACC 214
P +KI G + +S CC
Sbjct: 186 PANKVKIEH-----GRPIESSKSGCC 206
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD K IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A++ GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G + +S CC
Sbjct: 186 TSKVKIDQ-----GRPVESTKSGCC 205
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 149/174 (85%), Gaps = 2/174 (1%)
Query: 5 PARARAD-YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
P A A YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT++++GK+
Sbjct: 1825 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKK 1884
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQ+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V +
Sbjct: 1885 IKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER 1944
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
+L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 1945 LLLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 1997
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F E SAK+ NVE+ F ++A +IK+R+ T +
Sbjct: 124 DL-TTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGGS 182
Query: 189 EPQTIKI 195
E +KI
Sbjct: 183 EKSNVKI 189
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 152/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ + E
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATVGGE 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+K+ G + CC
Sbjct: 183 KPNVKLTP-----GTSVKPSSGGCC 202
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 157/210 (74%), Gaps = 7/210 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT++ SFNN++ W+ I+++A +NV+++LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLDEIDRYACENVSRLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-----TD 185
D+ SK+ V + Q LA I F ETSAK++ NVE F ++A +I +RLA
Sbjct: 124 DL-VSKKVVDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEIHKRLASEGGGMEG 182
Query: 186 SRAEPQTIKINQ-PDQAGGAAQAAQRSACC 214
AE +T KIN P GG Q + + CC
Sbjct: 183 ESAEARTAKINSAPLWLGGDKQTQEANNCC 212
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 156/208 (75%), Gaps = 9/208 (4%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
R +DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQI
Sbjct: 57 RRMHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 116
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGN
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 176
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDS 186
K D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T
Sbjct: 177 KCDLT-TKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 235
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSACC 214
AE +KI Q+ Q++ CC
Sbjct: 236 GAEKSNVKI----QSTPVKQSS--GGCC 257
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 148/186 (79%), Gaps = 3/186 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 12 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 132 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 190
Query: 189 EPQTIK 194
E +K
Sbjct: 191 EKSNVK 196
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 156/206 (75%), Gaps = 11/206 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
+DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWDT
Sbjct: 3 FDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWDT 62
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++VYD++D+ SFNN++ W+ IE++A +NVNK+LVGNK+D
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLLEIERYACENVNKLLVGNKSD 122
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSRA 188
++RAV + AD+ GI F ETSAK + NVE+ F ++A +IK+RL+ T + A
Sbjct: 123 R-TAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAGA 181
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+P + P Q Q+S CC
Sbjct: 182 QPGVRITSTPVQ-------PQKSGCC 200
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 149/204 (73%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ S
Sbjct: 124 DMAD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG---SSIAT 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N G + + CC
Sbjct: 180 NNTKANVNVAPGQGVSSNNNNGCC 203
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T + +P
Sbjct: 124 DMSD-KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERIGTTTANNKP 182
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+ V + + AD GI F ETSAK+ NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 147/204 (72%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + AD GI F ETSAK NVE+ F ++AR IK+R+ S
Sbjct: 124 DMAD-KKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG---SSIAT 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N G Q CC
Sbjct: 180 NNTKANVNVSPGQGVSNNQSGGCC 203
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 157/211 (74%), Gaps = 9/211 (4%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+L+GK IK
Sbjct: 2 ASMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTIT++YYRGA GI++VYD+TD+ SFNN++ W++ I+++A +NVNK+L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+ +RAV S + AD+ GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 122 VGNKCDLI-IRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQ 180
Query: 186 SRAEPQTIKINQPDQAGGAAQAAQRSA--CC 214
+++I GG+ ++ + CC
Sbjct: 181 QVGTGPSVRI------GGSQPVNEKKSGGCC 205
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T + +P
Sbjct: 124 DMSD-KKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERIGTTTANNKP 182
>gi|170042777|ref|XP_001849089.1| ras-related protein Rab-8A [Culex quinquefasciatus]
gi|167866246|gb|EDS29629.1| ras-related protein Rab-8A [Culex quinquefasciatus]
Length = 209
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 136/155 (87%), Gaps = 1/155 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 166
++E KR V +G+ LA EYGIKF ETSAK ++N+
Sbjct: 125 LNE-KRQVTRDRGEQLAVEYGIKFMETSAKASINI 158
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
AR YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A ++GI+F ETSAK N++V+ F+ +A I ++ ++
Sbjct: 122 NKCDMSD-RRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPESTDE 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
T+ QP + G + CC
Sbjct: 181 QSRDTVNPVQPQRPGSSG------GCC 201
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+EL GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ ++P
Sbjct: 124 DLVENK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMG-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
K + Q G Q+S CCG
Sbjct: 178 TGSKSAETVQMKGQP-IPQKSNCCG 201
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F+N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ T + A
Sbjct: 124 SDL-TSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P G + Q S CC
Sbjct: 183 GAKSTTITP----GQSVQQQSSGCC 203
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 147/201 (73%), Gaps = 9/201 (4%)
Query: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E D K IKLQIWDTAGQER
Sbjct: 2 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQER 61
Query: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESK 136
FRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+D+ +
Sbjct: 62 FRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL-TAN 120
Query: 137 RAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAEPQTIKI 195
RAV +A ADE GI F ETSAK NVE+ F ++A IK R+A + A P T+ I
Sbjct: 121 RAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPANNARPPTVNI 180
Query: 196 NQPDQAGGAAQAAQRSACCGS 216
+ Q S CC S
Sbjct: 181 S-------GKPVGQSSGCCSS 194
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++D+ K+LLIGDSGVGKSCLLLRF+D S+T + I+TIG+DFKI+T+ LDGK IKLQIWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI+LVYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIERYACENVNKLLVGNKT 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSR 187
D+ +++ V +++ ++ A+ GI F ETSAK NVEE F S+ARDIK RLA D+ S+
Sbjct: 126 DL-VNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDIKNRLADIQDSPSK 184
Query: 188 AEPQTIKINQPDQAG 202
+E IK +P ++G
Sbjct: 185 SEDVDIKAKKPIKSG 199
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
DM + K+ V S + AD GI F ETSAK NVE+ F ++AR IK+R+ T
Sbjct: 124 DMSD-KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTT 176
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQP--DQAGGAAQAAQRSACC 214
+KI+ QAGG CC
Sbjct: 183 RPNLKIDSTPVKQAGG--------GCC 201
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YD+L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD SF +++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ S +
Sbjct: 124 SDL-TSKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMG---SSST 179
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + G Q+ Q +CC
Sbjct: 180 PSGAAKSSTVTPGQTVQSQQSGSCC 204
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 152/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + GI F ETSAK+ NVE+ F ++A +IK R+ S +
Sbjct: 127 DL-TTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 191 QT-IKINQPDQAGGAAQAAQRSACC 214
+ +KI+Q G S CC
Sbjct: 186 ASKVKIDQ-----GRPVEKPNSGCC 205
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 157/207 (75%), Gaps = 5/207 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FT++FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KRAV +G+ +A E+ I+F ETSAK N N+E F +A I ++A ++
Sbjct: 122 NKCDMAD-KRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILDKVAGKETT 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
P + +N ++ G A + ACC
Sbjct: 181 DNPDRVVVN---RSTGERLPAYK-ACC 203
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 153/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD I F ETSAKT NVE+ F ++A +IK R+ + +
Sbjct: 126 DL-TTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEIKNRMGPGTAASPG 184
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
Q+ K++ + Q CC
Sbjct: 185 QSNKVDISSKPVDGKQG----GCC 204
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 150/195 (76%), Gaps = 5/195 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKI+T EL GK+IKLQ
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYR AMGI+LVYDVT+ SF+NI W++NI++HA++ V+K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNIQEHAAEEVDKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR + KG+A++ EYGI+F ETSAKTN+N+E F +A I +R T
Sbjct: 122 NKCDM-EDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILER---TPGV 177
Query: 188 AEPQTIKINQPDQAG 202
EP+ + P+ +G
Sbjct: 178 EEPRP-SLPPPNSSG 191
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLL+IGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLHEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ ++P
Sbjct: 124 DLTENK-VVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMG-----SQP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
K + Q G Q + CCG
Sbjct: 178 SGSKSAESVQMKGQP-IPQNNNCCG 201
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+D +++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL + P
Sbjct: 124 DL-VAKKVVDYNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K+ G +A + +S CC
Sbjct: 183 DKNKV----VPGQSAPISTKSGCC 202
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 2 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 121
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 122 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 171
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 143/185 (77%), Gaps = 4/185 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+ K IKLQIW
Sbjct: 3 AEYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ IE++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDS 186
D+ +K+AV T + AD GI F ETSAK + NVEE F +A IK RLA + S
Sbjct: 123 CDL-VTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 187 RAEPQ 191
A P
Sbjct: 182 AARPN 186
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 17 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 76
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 77 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 136
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 137 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 195
Query: 190 PQTIKINQP--DQAGGAAQAAQRSACC 214
+KI+ QAG S CC
Sbjct: 196 RPNLKIDSTPVKQAG--------SGCC 214
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
+ A A AR YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD
Sbjct: 8 ITANQATARR-YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD 66
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++
Sbjct: 67 GKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEG 126
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R
Sbjct: 127 VNKLLVGNKSDMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKER 185
Query: 181 LADT 184
+ T
Sbjct: 186 MGTT 189
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT+ ++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I++HAS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV E F S+ARDI
Sbjct: 125 M-EAKRRVQKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLARDI 169
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 147/190 (77%), Gaps = 1/190 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FTT+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI +HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNINEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR V S+G+ +A E+ I F ETSAK N+N+E+ F + I + +
Sbjct: 122 NKCDMDD-KRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSILNKTPGREPT 180
Query: 188 AEPQTIKINQ 197
P+ I I++
Sbjct: 181 DVPEKINIDR 190
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 139/179 (77%), Gaps = 1/179 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YDYL KLLLIGDSGVGK+CLL RF++ SF +FI+TIGIDFKI+T+E+DGKRIKLQ
Sbjct: 15 AQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKRIKLQ 74
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
+WDTAGQERFRTITTAYYRGAMGILLVYDVT + +F NI NW++NIE+HA++ V ++LV
Sbjct: 75 VWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITNWLKNIEEHAAEGVEQLLVA 134
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
NK D E KR + +GQ LA +GI F E SA T NV E F+ +AR +K + +S
Sbjct: 135 NKCD-QEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVREAFYRMARRVKTKHESKES 192
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
DM + K+ V S + AD GI F ETSAK NVE+ F ++AR IK+R+ T
Sbjct: 124 DMSD-KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTT 176
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+ K IKLQIW
Sbjct: 3 AEYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ IE++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+AV T + AD GI F ETSAK + NVEE F +A IK RLA
Sbjct: 123 CDL-VTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLA 174
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 147/183 (80%), Gaps = 2/183 (1%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T +F+NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D+ E KRAV KG+ +A E+GI+F ETSAK N+N+E F+ +A+ I + + +
Sbjct: 122 NKCDV-EDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAILTKTCGRE-Q 179
Query: 188 AEP 190
AEP
Sbjct: 180 AEP 182
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 154/207 (74%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ +K+ V + + A+ G+ F ETSAK NVE+ F ++A +IK R+ + + +
Sbjct: 127 DL-TTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQGA 185
Query: 190 PQTIKINQ--PDQAGGAAQAAQRSACC 214
+KIN P + GG CC
Sbjct: 186 GSNVKINSSTPVKQGGG-------GCC 205
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 154/204 (75%), Gaps = 9/204 (4%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEP 190
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T AE
Sbjct: 121 -TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI Q+ Q++ CC
Sbjct: 180 SNVKI----QSTPVKQSS--GGCC 197
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT++L+GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SF+N++ W+ I+++A DNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V S + A++ GI F ETSAK + NVE+ F ++A +IK R+ + A P
Sbjct: 124 DL-TTKKVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAP 182
Query: 191 Q-TIKINQPDQAGGAAQAAQRSACC 214
+KI+Q G +S+CC
Sbjct: 183 AGHVKIDQ-----GQPIDTGKSSCC 202
>gi|351726990|ref|NP_001238169.1| GTP binding protein [Glycine max]
gi|450635|gb|AAA50159.1| GTP binding protein [Glycine max]
Length = 218
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 155/223 (69%), Gaps = 25/223 (11%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTD-ESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
TAGQERFRTIT++YYRGA GI++VYDVTD E SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDGEESFNNVKQWLSEIDRYASDNVNKLLVGNK 123
Query: 130 ADMD-------------ESKRAVPT-SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
D++ E+ RAV +A AD GI F ETSAK NVE+ F ++
Sbjct: 124 CDLEANRAVSNIETADLEANRAVSNIETAKAFADGIGIPFIETSAKDATNVEQAFMAMTA 183
Query: 176 DIKQRLADTDS-RAEPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
IK R+A + A P T++I QP AQ+ CC S
Sbjct: 184 SIKDRMASQPANNARPPTVQIRGQP--------VAQKGGCCSS 218
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 151/203 (74%), Gaps = 5/203 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 51 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 110
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 111 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 170
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
M + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +
Sbjct: 171 MSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTA----N 225
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
K + G +A ++CC
Sbjct: 226 NTKPSVQVGQGQGVGSASSNSCC 248
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 152/184 (82%), Gaps = 4/184 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT+++ GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI---KQRLADTDSRA 188
M E KR V + + LA E+GI+FFETSAK++LNV+E F S+ARDI R + ++A
Sbjct: 125 M-EVKRKVQKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLARDILLKSGRRSGNSNKA 183
Query: 189 EPQT 192
P T
Sbjct: 184 PPTT 187
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+L+GK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +RAV S + AD+ GI F ETSAK++ NVE+ F ++A +IK R+
Sbjct: 127 DLI-IRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGTG 185
Query: 191 QTIKINQPDQAGGAAQAAQRSA--CC 214
+++I GG+ ++ + CC
Sbjct: 186 PSVRI------GGSQPVNEKKSGGCC 205
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A+ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATQGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 154/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL---ADTDSR 187
D+ +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ A T+
Sbjct: 127 DL-TTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGAVTNET 185
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ I+ Q+GG CC
Sbjct: 186 KQNVKIQSTPVKQSGG--------GCC 204
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 6 ATAAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK 65
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVN
Sbjct: 66 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVN 125
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
K+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 126 KLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 184
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 154/208 (74%), Gaps = 10/208 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRTIE++GK IKLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ES R V TS QA A+E GI F ETSAK ++NVEE F +++ IK+ A + + E
Sbjct: 124 DLAES-RTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALER 182
Query: 191 QTIKI----NQPDQAGGAAQAAQRSACC 214
+ I QP Q Q Q+S CC
Sbjct: 183 KPSNIVQMKGQPIQ-----QEQQKSRCC 205
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 63
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 64 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 123
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 124 M-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 181
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 152/207 (73%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +FNN++ W++ I+++A ++VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYACESVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSR 187
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK R+ T R
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPPQTTADR 182
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E +K P + G CC
Sbjct: 183 SEKVPLKSGSPVKPSGG-------GCC 202
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T
Sbjct: 124 DMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTT 176
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E KR V T++G+A+A E+GI+F ETSAK ++N++ F + I ++ + +
Sbjct: 122 NKSDM-EDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQ 180
Query: 188 AEPQTIKINQ 197
P + +++
Sbjct: 181 DAPDRVTVDR 190
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 124 DM-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 182
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 151/204 (74%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+EL+ K +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +V+DVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVFDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ T +P
Sbjct: 124 DIAD-KKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGSTTVNNKP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+ + Q G Q CC
Sbjct: 183 -TVSVQQ----GTGVQQGSAGGCC 201
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 1 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 60
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+D
Sbjct: 61 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 120
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
M E K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ +P
Sbjct: 121 M-EDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKP 178
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 149/173 (86%), Gaps = 2/173 (1%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
A A+A YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+I
Sbjct: 1 SAMAKA-YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI 59
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQ+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++
Sbjct: 60 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERL 119
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
L+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 120 LLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 171
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K V +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMA 174
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 143/185 (77%), Gaps = 4/185 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL KLLLIGD+GVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+ K IKLQIW
Sbjct: 3 AEYDYLFKLLLIGDTGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ IE++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDS 186
D+ +K+AV T + AD GI F ETSAK + NVEE F +A IK RLA + S
Sbjct: 123 CDL-VTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 187 RAEPQ 191
A P
Sbjct: 182 AARPN 186
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 157/220 (71%), Gaps = 22/220 (10%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESK-RAVPTSK-----------GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK 178
D+ +K + T+K A ADE GI F ETSAK NVE+ F ++A +IK
Sbjct: 124 DLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMAAEIK 183
Query: 179 QRLADTD-SRAEPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
R+A + A P T++I QP Q++ CC +
Sbjct: 184 NRMASQPVNNARPPTVQIRGQP--------VNQKAGCCST 215
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ +
Sbjct: 127 DL-TTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGS 185
Query: 191 QTIKINQ---PDQAGGAAQAAQRSACC 214
KIN P + G S CC
Sbjct: 186 SHDKINPSTTPVKPSG-------SGCC 205
>gi|340509261|gb|EGR34812.1| Rab8-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 205
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 151/207 (72%), Gaps = 2/207 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+ P + +YD+L+KLL+IGDSGVGK+ +LLRF D F+ + +TTIGIDFK++ IE+D
Sbjct: 1 MSRQPQKD-TEYDWLVKLLIIGDSGVGKTNILLRFCDDKFSQTHLTTIGIDFKMKKIEID 59
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
K+IKLQ+WDTAGQERFRTIT YY+GAMGI++ Y + D+ SFNN+ W++ I + A N
Sbjct: 60 NKKIKLQVWDTAGQERFRTITQNYYKGAMGIIMTYAINDKESFNNVELWMKQIREQADSN 119
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V KILVGNK+DM ES+R V +G+ALAD +GIKFFETSAKTN NV + F SI RDIK++
Sbjct: 120 VQKILVGNKSDM-ESERQVTLQEGKALADSFGIKFFETSAKTNENVHDAFISICRDIKEK 178
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQA 207
+ ++ A+ + N Q G +
Sbjct: 179 MMQNENNAKNSHLSNNPNQQNKGGCEC 205
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
P + +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 22 PXSSXNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 81
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK
Sbjct: 82 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK 141
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+LVGNK D+ +K+ V + + AD GI F ETSAK NVE+ F + A +IK+R
Sbjct: 142 LLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFXTXAAEIKKR 197
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+Y YL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 158/208 (75%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ ++K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ S++
Sbjct: 124 DLVDNK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGSQPAASKS 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACCG 215
T+++ QP Q Q++ CCG
Sbjct: 183 TGTTVQMKGQPIQ--------QKNNCCG 202
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+D +++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD +F+N+R W++ I++ A ++VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V T+ ++ AD GI F ETSAK + NVE+ F ++A +IK RL T S+ P
Sbjct: 124 DL-VAKKVVDTNTAKSFADTLGIPFLETSAKQSTNVEQAFMTMATEIKNRL--TASQPAP 180
Query: 191 QT--IKINQPDQAGGAAQAAQRSACC 214
T K+ G +A +S CC
Sbjct: 181 TTGGAKV----VPGSSAPIQTKSGCC 202
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 159/208 (76%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+++V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANESVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE- 189
D+ E+K V T G+ALADE GI F ETSAK ++NVE+ F ++A +IK+++ + + A+
Sbjct: 124 DLVENK-VVDTQMGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAGAKR 182
Query: 190 -PQTIKIN-QPDQAGGAAQAAQRSACCG 215
T++I QP + Q+ CCG
Sbjct: 183 TGSTVQIKGQPIE--------QKGNCCG 202
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
AR YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A ++GI F ETSAK N++V+ F+ +A I ++ D+
Sbjct: 122 NKCDMSD-RRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDE 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
T+ QP + + CC
Sbjct: 181 QSRDTVNPVQPQRQSSSG------GCC 201
>gi|390342453|ref|XP_796218.3| PREDICTED: ras-related protein Rab-8A-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
ARA YD+L K+++IGD GVGK+C++ RFS+ F T+F++ IGIDFKI+ IELDGK+IKLQ
Sbjct: 2 ARA-YDFLYKIVVIGDPGVGKTCVIFRFSEDVFHTTFLSVIGIDFKIKMIELDGKKIKLQ 60
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF+TITT YYRGA+GI+++YD+T+++SF N+R WIR E+H S + K+++G
Sbjct: 61 IWDTAGQERFKTITTGYYRGALGIMVLYDITNQNSFVNMRKWIRESEEHGSADAEKMILG 120
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL---ADT 184
NK DMDE+ RAV KG+ LA ++GIKF ETSAK N+N+E+ F ++ RDIK ++ D
Sbjct: 121 NKCDMDET-RAVSQEKGEQLAKDFGIKFLETSAKANINIEQAFMTLVRDIKSKMDRNMDA 179
Query: 185 DSRAEPQTIKINQPD 199
+ +P+ IK+ + +
Sbjct: 180 KGQQKPEVIKVTKKN 194
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F+T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E +F NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK+DM E KR V T +G+A+A E+GI+F ETSAK ++N++ F + I ++ + +
Sbjct: 122 NKSDM-EDKRVVSTGRGEAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQ 180
Query: 188 AEPQTIKINQ 197
P + +++
Sbjct: 181 DAPDRVTVDR 190
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 151/203 (74%), Gaps = 3/203 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF D F SFITTIGIDFKI+T++++GK+IKLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKIKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F+NIR W + + +HA+D+ +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQWFKTVNEHANDDAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
MD R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++ D D A
Sbjct: 137 MDT--RTVTYEQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI-DNDKLAGGS 193
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
A+ ++ACC
Sbjct: 194 GAGKEGNININSGNNASSKNACC 216
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 149/172 (86%), Gaps = 2/172 (1%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A A+A YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IK
Sbjct: 41 AMAKA-YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 99
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQ+WDTAGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L
Sbjct: 100 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLL 159
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
+GNK DM E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 160 LGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 210
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
AR YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 1 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 60
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+RNI++HAS++V K+++G
Sbjct: 61 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 120
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + +R V +G+ +A ++GI F ETSAK N++V+ F+ +A I ++ D+
Sbjct: 121 NKCDMSD-RRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDE 179
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
T+ QP + + CC
Sbjct: 180 QSRDTVNPVQPQRQSSSG------GCC 200
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+D +++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL + ++P
Sbjct: 124 DL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRL----TASQP 178
Query: 191 -QTIKINQPDQAGGAAQAAQRSACC 214
QT+ N+ G +A + +S CC
Sbjct: 179 TQTVDKNKV-VPGSSAPISPKSGCC 202
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+ K IKLQIW
Sbjct: 3 SEYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ IE++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+AV T + AD GI F ETSAK + NVEE F +A IK RLA
Sbjct: 123 CDL-VTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLA 174
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 149/204 (73%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF+N++ W++ I+++A +NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ + P
Sbjct: 127 DL-TTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMG---PGSMP 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
Q K N Q CC
Sbjct: 183 QDGKQNVKIQGASTPVKQSSGGCC 206
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 67 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 126
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 127 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 186
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 187 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 245
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 246 RPNLKIDSTPVKPAGG-------GCC 264
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 72 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 131
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 132 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 191
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 192 DLT-TKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 250
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 251 RPNLKIDSTPVKPAGG-------GCC 269
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGK+CLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 12 EYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 132 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 181
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 153/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +FNN++ W I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVKTWFHEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ AE
Sbjct: 124 DITD-KKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMG---GAAEN 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K N + +Q + S+CC
Sbjct: 180 TAAKANVNLRGQNVSQGSS-SSCC 202
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 149/191 (78%), Gaps = 4/191 (2%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDS VGKSCLLLRF+D S+ ++I+TIG+DFKIRTIELDGK +KLQIWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++ASD+V K+LVGNK D+
Sbjct: 65 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDL 124
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+SK V T + +A A+ GI F ETSAK ++NVEE F +++ DIK+R+A + T
Sbjct: 125 VDSK-VVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSSDIKKRMATQPAVERKPT 183
Query: 193 IKIN---QPDQ 200
+ I+ QP Q
Sbjct: 184 VHIHMRGQPIQ 194
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D ++ S+I+TIG+DFKIRTIE DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD T+ SFNN++ W+ I+++A+++V K+L+GNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSR 187
DM ESK V T G+ALADE GI F ETSAK ++NVE+ F +IA +IK+++ + +
Sbjct: 124 DMVESK-VVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKT 182
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACCG 215
+ P T+++ QP Q CCG
Sbjct: 183 SGPGTVQMKGQPIQ-------QNNGGCCG 204
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ SF +++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F +ARDI
Sbjct: 125 M-EAKRKVRKEQATKLAQEHGIRFFETSAKSSVNVDEAFSCLARDI 169
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 153/206 (74%), Gaps = 6/206 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +FTT+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF NI W+RNI++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM + KR V +G+ +A E+GI+F ETSAK N+N+++ F +A I + A +
Sbjct: 122 NKCDMSD-KRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGREPG 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSAC 213
+ +++ Q+ RS C
Sbjct: 181 DHVDRVLVDRKQQSN-----TSRSCC 201
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I++ A + VN +LVGNK D
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRFAVEGVNCLLVGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT--DSRAE 189
+ + K+ V + + AD GI F ETSAK + NVE+ F ++AR IK+R++++ ++ +
Sbjct: 126 ITD-KKVVEYTVAKEFADGLGIPFLETSAKDSTNVEQAFLTMARQIKERMSNSTLNTASS 184
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
T+K+ Q G + S CC
Sbjct: 185 KTTVKVGQ-----GTNVSQSSSGCC 204
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 153/208 (73%), Gaps = 5/208 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+GK IKLQIW
Sbjct: 3 SEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ I++ AS+NVNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDATDMESFNNVKTWLSEIDKFASENVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ +K+AV T + AD GI F ETSAK NVEE F +A DIK+R+A + +
Sbjct: 123 CDL-VTKKAVDTQMAKEFADSLGIPFLETSAKEASNVEEAFVRMATDIKKRVAAQGANSG 181
Query: 190 PQTIKINQPDQAGG---AAQAAQRSACC 214
++P +GG A + + CC
Sbjct: 182 SGGPN-SKPLLSGGNKPAGASGNKGGCC 208
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ SF ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 95 YDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDT 154
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 155 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 214
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK++ NV+E F S+ARDI
Sbjct: 215 M-EAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDI 259
>gi|380023908|ref|XP_003695751.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Apis florea]
Length = 208
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 152/192 (79%), Gaps = 10/192 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGI++ I+++ K IKL+IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGINYHFLLIKIN-KIIKLEIWDT 63
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVT+E SF NI+NWIRNIE++AS +V K+L+GNK +
Sbjct: 64 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 123
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+ E KR V +G+ LA EYGIKF ETSAK+++NVEE F+++ARDIK ++ +
Sbjct: 124 LTE-KRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKM--------EK 174
Query: 192 TIKINQPDQAGG 203
++ + P + GG
Sbjct: 175 KLEASNPPKGGG 186
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ L+ K IKLQIW
Sbjct: 3 AEYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ IE++AS+NVNKILVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V T + AD GI F ETSAK + NVEE F +A IK RLA
Sbjct: 123 CDL-VTKKVVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLA 174
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 156/210 (74%), Gaps = 11/210 (5%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
+ +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELD K IKLQ
Sbjct: 5 SNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTIKLQ 64
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS++VNK+LVG
Sbjct: 65 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVG 124
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D+ +K+ V + + AD+ G+ F ETSAK NVE+ F ++A +IK R+ +
Sbjct: 125 NKCDL-TTKKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPVAAA 183
Query: 188 AEPQ-TIKIN--QPDQAGGAAQAAQRSACC 214
+ + +KIN P + GG CC
Sbjct: 184 GDSKPNVKINASTPVKQGGG-------GCC 206
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 147/204 (72%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ S
Sbjct: 124 DMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG---SSIAT 179
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K + G CC
Sbjct: 180 NNTKASVNVSPGHGVSNNSSGGCC 203
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++D+ K+LLIGDSGVGKSCLLLRF+D S+T + I+TIG+DFKI+T+ LDGK IKLQIWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI+LVYD TD+ SFNN++ W+ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIDRYACENVNKLLVGNKT 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +++ V T++ ++ A+ GI F ETSAK NVEE F S+ARDIK RLAD +
Sbjct: 124 DL-VNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEAPKG 182
Query: 191 QTIKINQPDQAG 202
+ I+ P + G
Sbjct: 183 DGVTISTPSKTG 194
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ K+ V + + AD+ I F ETSAK NVE+ F ++A+ IK R+ S
Sbjct: 124 SDL-TGKKVVEYTVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMG---SATA 179
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + G + Q+ Q + CC
Sbjct: 180 PTGAAKSSTVTPGQSVQSQQSNGCC 204
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 142/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD +++ S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS++VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
DM +K+ V + + AD I F ETSAK N NVE+ F ++A +IK ++
Sbjct: 124 DM-TTKKVVDYTTAKEYADSLNIPFLETSAKNNTNVEQAFLTMASEIKNKM 173
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI L+ K +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SF+N++ WI+ I+++A +NVNK+LVGNK
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKC 124
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ SKR V + +G+ LAD +GIKF ETSAK NVE+ F ++A +IK+R+
Sbjct: 125 DL-VSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRV 174
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+NN++ W++ IE++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD I F ETSAK NVE+ F ++A +IK+R+ + +
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLSIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGD 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + GG CC
Sbjct: 183 RPNLKIDSTPVKQGGG-------GCC 201
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 183 RPNLKIDSTPVKPAGG-------GCC 201
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ SF ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK++ NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLARDI 169
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRTIE++GK IKLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDRYANDTVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ES R V TS QA A+E GI F ETSAK ++NVEE F +++ IK A + + E
Sbjct: 124 DLAES-RTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARSQAALER 182
Query: 191 QTIKI----NQPDQAGGAAQAAQRSACCGS 216
+ I QP Q Q Q+S CC +
Sbjct: 183 KPSNIVQMKGQPIQ-----QEQQKSRCCST 207
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 124
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 125 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 175
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
+D D IKLLLIG+SGVGKS LLLRFS+ +F +ITT+GIDF+++ IELD K++KLQIW
Sbjct: 2 SDKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIW 61
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTI ++YYRG MGI+LVYD+T SFNNI W+RNIE +A NVNKILVGNK
Sbjct: 62 DTAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNIEYWMRNIEANADQNVNKILVGNK 121
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D E KR V + +GQ +A++ GI F ETSAK +L V++ F S+ARD+ QR+ ++ A+
Sbjct: 122 CDA-EDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQRIGESSQSAQ 180
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + Q Q + + CC
Sbjct: 181 PGIVDPTQ------QTQPTESTGCC 199
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 153/203 (75%), Gaps = 6/203 (2%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 69
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTDE SF +++ W++ I+++A++ VNK+LVGNK+D+
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQWMQEIDRYAAEGVNKLLVGNKSDL 129
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ- 191
+ K+AV T + A+ I ETSAK NVE+ F ++A+ IK R+ T + + +
Sbjct: 130 TD-KKAVSTEQANEFAESIKISLLETSAKDATNVEQAFLTMAKQIKDRMGTTMQQTQTKS 188
Query: 192 TIKINQPDQAGGAAQAAQRSACC 214
T+K+ Q G + + Q CC
Sbjct: 189 TVKVGQ----GASLEPKQSGGCC 207
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 156/216 (72%), Gaps = 15/216 (6%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M PP + DYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELD
Sbjct: 1 MFFPPFCS----DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELD 56
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+
Sbjct: 57 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDS 116
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V K+LVGNK D+ E+K V T +A ADE GI F ETSAK + NVE+ F ++A +IK++
Sbjct: 117 VCKLLVGNKCDLVENK-VVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKK 175
Query: 181 LAD--TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ T S++ QP Q Q+S+CC
Sbjct: 176 MGSQPTSSKSSGNVQMKGQPIQ--------QKSSCC 203
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK D+
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDL 130
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A
Sbjct: 131 -HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDPA 189
Query: 193 IKINQPDQAGGAAQAAQRSACC 214
N+ G + +S CC
Sbjct: 190 ---NKVKIEHGRPIESSKSGCC 208
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 153/208 (73%), Gaps = 10/208 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRTIE++GK IKLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN + W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNAKQWLSEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ES R V TS QA A+E GI F ETSAK ++NVEE F +++ IK+ A + + E
Sbjct: 124 DLAES-RTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALER 182
Query: 191 QTIKI----NQPDQAGGAAQAAQRSACC 214
+ I QP Q Q Q+S CC
Sbjct: 183 KPSNIVQMKGQPIQ-----QEQQKSRCC 205
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 124
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 125 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 175
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK IKLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYD TD+ +FNN++ W+ I+++A DNVNK+LVGNK D+
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDL 130
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+K+ V + + AD+ GI F ETSAK +NVE+ F ++A +IK R+ S A
Sbjct: 131 -HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDPA 189
Query: 193 IKINQPDQAGGAAQAAQRSACC 214
N+ G + +S CC
Sbjct: 190 ---NKVKIEHGRPIESSKSGCC 208
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 154/207 (74%), Gaps = 5/207 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL K+LLIG+SGVGKS LLLRF+D FT +F+ TIG+DFKIRTIE+DGK IKLQIWD
Sbjct: 4 EYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERF+TIT++YY+GA GI++ YD+TD SF+ I NW+ +E+HASDN+++ILVGNK+
Sbjct: 64 TAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMNEVEKHASDNISRILVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--- 187
DM+++ R V T +G+ LA+ Y ++F ETSAK NVEE F + R+IK R+A T +
Sbjct: 124 DMEDA-RQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREIKSRVAITQPKKAT 182
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+ Q +IN+ Q ++ CC
Sbjct: 183 EQTQAQRINKNQHQTKKIQ-EKKGGCC 208
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 159/208 (76%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ + T +++
Sbjct: 124 DLIENK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKRKMGNQPTANKS 182
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACCG 215
T+++ QP Q Q++ CCG
Sbjct: 183 TGGTVQMKGQPIQ--------QKNNCCG 202
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 148/206 (71%), Gaps = 10/206 (4%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++V+DVTDE SF N++ W+ I++ A+DN+NK+LVGNK D+
Sbjct: 82 GQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKGWLTEIDKFATDNINKLLVGNKCDV 141
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RAEP 190
+KR V +A ADE GI F ETSAK NVE+ F ++A +IK+R+A + P
Sbjct: 142 -TNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMASQPAANAVRP 200
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
T+ I Q + CC S
Sbjct: 201 TTVPIR-------GKPVNQSTTCCSS 219
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 156/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D ++ S+I+TIG+DFKIRTIE DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD T+ SFNN++ W+ I+++A+++V K+L+GNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSR 187
DM E+K V T G+ALADE GI F ETSAK ++NVE+ F +IA +IK+++ + +
Sbjct: 124 DMVENK-VVSTETGKALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKT 182
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACCG 215
+ P T+++ QP Q CCG
Sbjct: 183 SGPGTVQMKGQPIQ-------QNNGGCCG 204
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 152/203 (74%), Gaps = 4/203 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++D+ K+LLIGDSGVGKSCLLLRF+D S+T + I+TIG+DFKI+T+ LDGK IKLQIWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI+LVYD TD+ SF N++ W+ I+++A +NVNK+LVGNK
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKT 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +++ V +++ ++ A+ YGI F ETSAK NVEE F S+ARDIK RLAD +P
Sbjct: 126 DL-VNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPKP 184
Query: 191 QTIKINQPDQAGGAAQAAQRSAC 213
+ I ++ ++S C
Sbjct: 185 DEVDIKSKNK---TKSGGKKSFC 204
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT++++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 149/195 (76%), Gaps = 5/195 (2%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFS+ +F T+FI+TIGIDFKI+T +L GK+IKLQ
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYR AMGI+LVYDVT+ SF+NI W+RNI++HA++ V+K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLRNIQEHAAEEVDKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR + KG+A++ EYGI+F ETSAKTN+N+E F +A I R T
Sbjct: 122 NKCDM-EDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDR---TPGI 177
Query: 188 AEPQTIKINQPDQAG 202
EP+ + P+ +G
Sbjct: 178 EEPRP-SLPPPNVSG 191
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 148/204 (72%), Gaps = 9/204 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLL+RF+D SF+ ++I+TIG+DFKIRTI+LDGK +KLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD++SF N+++W++ IE +A+ VN++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +S RAV T A E+ + F ETSAK +NVE+ F +AR IK A S +
Sbjct: 124 DLPKS-RAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSSN 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+ QP G CC
Sbjct: 183 VTVNSTQPVTKSG--------GCC 198
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 150/179 (83%), Gaps = 6/179 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+ W+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-----KQRLADTD 185
M E+KR V + LA E+GI+FFETSAK++ NV+E F S+ARDI +RL D++
Sbjct: 125 M-EAKRKVQKERADKLAREHGIRFFETSAKSSTNVDEAFSSLARDILHKSGARRLGDSN 182
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT++++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDF+IRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A A+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQ
Sbjct: 2 AAAEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++A + VNK+LVG
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQWLQEIDRYAVEGVNKLLVG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
NK+D+ +K+ V ++ ++ ADE GI F ETSAK NVE+ F ++++ IK R+ T
Sbjct: 122 NKSDL-TTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGST 177
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 149/204 (73%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK R+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI+ Q+ S CC
Sbjct: 183 GQVKIDST-----PVQSKSGSGCC 201
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+NN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD I F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|89257659|gb|ABD65146.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 235
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 152/216 (70%), Gaps = 21/216 (9%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
+PP R DY L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK
Sbjct: 39 SPPLRCYRDY--LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGK 96
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
IKLQIWDTAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W+ I+++AS++VN
Sbjct: 97 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASESVN 156
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
K+LVGNK D+ K A ADE GI F ETSAK NVEE F ++ IK R+A
Sbjct: 157 KLLVGNKNDLTSQK---------AFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMA 207
Query: 183 DTDS-RAEPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
S ++P T++I QP Q+S CC S
Sbjct: 208 SQPSGGSKPATVQIRGQP--------VNQQSGCCSS 235
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+NN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD I F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 153/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 183 RPNLKIDSTPVKPAGG-------GCC 201
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 147/200 (73%), Gaps = 7/200 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W++ I+++A +NVNK+LVGN+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQWLQEIDRYACENVNKLLVGNQC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ K+ V + AD GI F ETSAK NVE+ F ++A +IK R+ +
Sbjct: 127 DLTH-KKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPSAPGS- 184
Query: 191 QTIKIN-----QPDQAGGAA 205
+KIN +P GG
Sbjct: 185 AGVKINPSVPVEPQPGGGCC 204
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 154/208 (74%), Gaps = 8/208 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT +YYRGA GI++VYDVTD +F N++ W++ I++ AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRFASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A+ IK R+ T + A
Sbjct: 124 SDL-TNKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 190 PQT---IKINQPDQAGGAAQAAQRSACC 214
+ +K+ Q G A ++CC
Sbjct: 183 GASKGGVKVGQ----GQAVGQQTSNSCC 206
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ + +P
Sbjct: 124 DLVENK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGN-----QP 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACCG 215
K Q G Q++ CCG
Sbjct: 178 TASKSTGTVQMKGQP-IEQKNNCCG 201
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 150/205 (73%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ SK+ V + AD+ I F ETSAK NVE+ F ++A+ IK R+ T + +
Sbjct: 124 SDL-TSKKVVEYGVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTTSG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P G Q Q S CC
Sbjct: 183 TGKSTTITP---GQTVQQNQSSGCC 204
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 157/208 (75%), Gaps = 10/208 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+ VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLQEIDRYASETVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT-DSRAE 189
D+ +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ ++ +
Sbjct: 124 DL-TTKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVFPAKEK 182
Query: 190 PQTIKINQPDQAGGAAQAA--QRSACCG 215
Q+I I GG+ A Q + CG
Sbjct: 183 GQSINI------GGSTTIAKPQGGSDCG 204
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 153/205 (74%), Gaps = 12/205 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 137 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 196
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+
Sbjct: 197 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 256
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAEPQ 191
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 257 -TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 315
Query: 192 TIKINQPD--QAGGAAQAAQRSACC 214
+KI+ QAGG CC
Sbjct: 316 NLKIDSTPVKQAGG--------GCC 332
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 153/206 (74%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A + VN++LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
DM + K+ V S + AD I F ETSAK + NVE+ F +++R IK+R+ + S
Sbjct: 124 DMVD-KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSN 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
++K+ Q G + S CC
Sbjct: 183 AKSSVKVGQ-----GTNVSQSSSNCC 203
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 149/206 (72%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
D L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQIWD
Sbjct: 12 DNHLLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERF TITT+YYRGA GILLVYD+T +F+NI W+RNI +HAS++V ++L+GNK
Sbjct: 72 TAGQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIGNKC 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI--KQRLADTDSRA 188
DM E KR + +G+ +A+E GIKFFETSAK N+N+E F S+A DI KQR + + R
Sbjct: 132 DM-EDKRLISEERGRKVAEENGIKFFETSAKENINIEIAFNSLAEDILNKQRPVEDNERK 190
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
P G A + +CC
Sbjct: 191 GGVV-----PGLGDGQAGSGGPGSCC 211
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRT+T++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLL+IGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 159/219 (72%), Gaps = 19/219 (8%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+AP +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+
Sbjct: 1 MSAP------EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELE 54
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD ++ N++ W++ I+++A +
Sbjct: 55 GKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEG 114
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK+D+ +K+ V ++ +A ADE GI F ETSAK NVE+ F ++++ IK R
Sbjct: 115 VNKLLVGNKSDL-ATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDR 173
Query: 181 LADTDSRAEP---QTIKINQPDQAGGAAQAAQRSA--CC 214
+ + + P TIK G Q++A CC
Sbjct: 174 MGSSTMASGPGAKSTIK-------GLGQNVEQKTAGGCC 205
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 147/204 (72%), Gaps = 9/204 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLL+RF+D SF+ ++I+TIG+DFKIRTI+LDGK +KLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD++SF N+++W++ IE +A+ VN++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +S RAV T A E+ + F ETSAK +NVE+ F +AR IK A S
Sbjct: 124 DLPKS-RAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMPSN 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
T+ QP G CC
Sbjct: 183 VTVNSTQPVTKSG--------GCC 198
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 141/170 (82%), Gaps = 1/170 (0%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 684 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 743
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+
Sbjct: 744 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 803
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 804 T-TKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 852
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRM 173
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF N++ W++ I+++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK R+ T
Sbjct: 124 DL-AAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPT 176
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T ++I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 183 RPNLKIDSTPVKPAGG-------GCC 201
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 151/206 (73%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT++LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ ++++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQWLEEVDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA-- 188
D + +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ S A
Sbjct: 124 D-EVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAVT 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
E +KI+Q G +S CC
Sbjct: 183 ESAKVKIDQ-----GRTIETNKSGCC 203
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 149/205 (72%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F+N++ W+ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLSEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ K+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ T + +
Sbjct: 124 SDL-TGKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P Q Q+ CC
Sbjct: 183 AAKSSTVTPGQ---TVQSQTGGGCC 204
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 154/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQER RTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQP--DQAGGAAQAAQRSACC 214
+KI+ QAGG CC
Sbjct: 183 RPNLKIDSTPVKQAGG--------GCC 201
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 154/214 (71%), Gaps = 7/214 (3%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+A A+A +D +KLLL+GDSGVGKSCLLLRF D F SFITTIGIDFKI+TI+++
Sbjct: 1 MSANRAKA---FDRTMKLLLVGDSGVGKSCLLLRFVDDKFNPSFITTIGIDFKIKTIDIN 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQ+WDTAGQERFRTITTAYYRGAMGI++VYDV DE+SF +++ W + + QHA D+
Sbjct: 58 GKRIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVNQHAKDD 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
LVGNK D DE R V T +G+ LA E GI F E SAK+++NV EVF+ +A I ++
Sbjct: 118 AQLFLVGNKCD-DEESRQVSTKQGELLAQELGIPFMEASAKSSVNVSEVFYKLAGLILEK 176
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+D ++ +E Q+ K N + G S CC
Sbjct: 177 TSDEEAASE-QSQKGNVDVRQAG--HTVSXSGCC 207
>gi|343470855|emb|CCD16567.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 154/209 (73%), Gaps = 7/209 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LDGK IKLQIW
Sbjct: 3 SEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN+++W+ I++ AS++VNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSWLSEIDKFASESVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ +K+AV T Q AD GI F ETSAK NVE+ F +A++IK+R+A + +
Sbjct: 123 CDL-VTKKAVDTQMAQEFADSLGIPFLETSAKEAANVEKAFVEMAKNIKKRVAAQGASSG 181
Query: 190 PQTIKINQPDQAGGA----AQAAQRSACC 214
+P G + A+QR CC
Sbjct: 182 GAGSA--RPVLTGASRPANNTASQRGGCC 208
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 143/181 (79%), Gaps = 1/181 (0%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
+ P R++ DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDG
Sbjct: 35 SCPVKRSQRGSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 94
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
K IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W+ I ++AS+NV
Sbjct: 95 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENV 154
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NK+LVGNK+D+ +K+ V + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 155 NKLLVGNKSDL-TTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 213
Query: 182 A 182
Sbjct: 214 G 214
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++ D IKLLLIG+SGVGKS LLLRFS+ +F +ITT+GIDF+++ IELD K++KLQIW
Sbjct: 2 SEKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIW 61
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTI ++YYRG MGI+LVYD+T SFNNI W+RNIE +A NVNKILVGNK
Sbjct: 62 DTAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNIEYWMRNIEANADQNVNKILVGNK 121
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D E KR V + +GQ +A++ GI F ETSAK +L V++ F S+ARD+ QR+ ++ A+
Sbjct: 122 CDA-EDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQRIGESSQSAQ 180
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + Q Q + + CC
Sbjct: 181 PGIVDPTQ------QTQPTESTGCC 199
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 154/209 (73%), Gaps = 11/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D ++ S+I+TIG+DFKIRTIE DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD T+ SFNN++ W+ I+++A+D+V K+L+GNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANDSVCKLLIGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSR 187
DM ESK V T G+ALADE GI F ETSAK + NVE+ F +IA +IK+++ + +
Sbjct: 124 DMVESK-VVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNANKT 182
Query: 188 AEPQTIKI-NQPDQAGGAAQAAQRSACCG 215
+ T+++ QP Q CCG
Sbjct: 183 SGSGTVQMKGQPIQQNNGG------GCCG 205
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 152/205 (74%), Gaps = 8/205 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT EL+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A + VN++LVGNK+D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAE 189
M + K+ V S + AD I F ETSAK + NVE+ F +++R IK+R+ + S
Sbjct: 128 MVD-KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNA 186
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
++K+ Q G + S CC
Sbjct: 187 KSSVKVGQ-----GTNVSQSSSNCC 206
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 142/171 (83%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 2 EYDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 121
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 122 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 171
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVG K
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG 174
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W+ I ++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 124 DL-TTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVQRLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK++ NV+E F S+ARDI
Sbjct: 125 M-EAKRRVRKEQADQLAREHGIRFFETSAKSSTNVDEAFSSLARDI 169
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 147/208 (70%), Gaps = 12/208 (5%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEKDGKTIKLXIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYR A GI++VYDV DE FNN++ W+ I+++ASDNVNK+LVGNK+D
Sbjct: 65 AGQERFRTITSSYYREAHGIIIVYDVIDEDRFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RAE 189
M + R V + AD+ GI F ETSAK NVE+ F +++ IK R+A S A+
Sbjct: 125 M-TTNRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSTAIKNRMASQPSANNAK 183
Query: 190 PQTIKIN-QPDQAGGAAQAAQRSACCGS 216
P + I QP +S CC S
Sbjct: 184 PPIVHIKGQP--------VGPKSGCCSS 203
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 150/202 (74%), Gaps = 4/202 (1%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ +FNN++ W++ I++ AS+ V+K+LVGNK+D+
Sbjct: 104 GQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQWLQEIDRFASEGVHKLLVGNKSDL 163
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
E+K+ V A + GI F ETSAK NVE+ F ++A+ IK ++ S A+
Sbjct: 164 -ETKKVVDAKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGAASS-AQSNQ 221
Query: 193 IKINQPDQAGGAAQAAQRSACC 214
K N + G A Q S CC
Sbjct: 222 AKAN--IKVGQAVAPQQSSGCC 241
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 153/206 (74%), Gaps = 6/206 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADTDSRA 188
+D+ +K+ V + AD+ I F ETSAK NVE+ F ++A+ IK R+ A + S+
Sbjct: 124 SDL-TAKKVVEYGAAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATSTSQG 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
+ + + AG + Q CC
Sbjct: 183 TGKGVTVT----AGQSVQQQSGGGCC 204
>gi|190345453|gb|EDK37339.2| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
A P+RA YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE G
Sbjct: 3 ARAPSRA---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 59
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
K+IKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ W + + QHA+++
Sbjct: 60 KKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVETWYQTVTQHANEDA 119
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
LVGNK D D+S R V T +GQ LA + + F E SAK+N NV+ +F+ +A I+++
Sbjct: 120 QIFLVGNKCD-DDSSRQVSTEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQEKH 178
Query: 182 ADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
D D+ P I ++Q G ++ CC
Sbjct: 179 GDNDAGTGPSGIDVSQGSNTG------FKNNCC 205
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D V K+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD---TDSR 187
D+ ++K V + +A ADE GI F ETSAK ++NVE+ F ++A +IK+++ T
Sbjct: 124 DLVDNK-VVDSLTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQTTTGKS 182
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACCG 215
AE +K QP Q+S CCG
Sbjct: 183 AESVQMK-GQP--------IPQKSNCCG 201
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TIT +YYRGAMGI+LVYD+T++ SF NI W+RNIE+HAS++V K+L+G
Sbjct: 62 IWDTAGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITKWLRNIEEHASEDVEKMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NK D++E KR V +G+ +A ++GI+F ETSAK +N+++ F+ +A I ++
Sbjct: 122 NKCDIEE-KRMVSKERGEEIAGKHGIRFLETSAKAKINIDKAFYDLAEAILNKV 174
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 150/210 (71%), Gaps = 17/210 (8%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W+ IE++A DNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIERYACDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + A + I F ETSAK+ NVE+ F ++A IK R+ P
Sbjct: 124 DL-TTKKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAHIKLRVG-------P 175
Query: 191 QTIKINQPDQAGGA------AQAAQRSACC 214
QT + DQ G + +S CC
Sbjct: 176 QT---SMGDQGGKVKFDQSRPVESTKSGCC 202
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
+D+ SK+ V S + AD+ I F ETSAK NVE+ F ++A+ IK R+ T +
Sbjct: 124 SDL-TSKKVVEYSVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTST 179
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 153/209 (73%), Gaps = 8/209 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+G+ IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN+ W+ I ++AS+NVNK++VGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMHLWMEEINRYASENVNKLIVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+AV + + AD G+ F ETSAK NVE+ F ++A +IK R++ ++ +
Sbjct: 127 DL-TSKKAVDYTTAKEYADSLGVPFLETSAKNATNVEQAFLTMAAEIKNRVSSGPTQNDS 185
Query: 191 QTIKINQPDQAGGAAQ-----AAQRSACC 214
K N Q+G Q CC
Sbjct: 186 H--KSNLHIQSGPLRQEGAGQEDGGGGCC 212
>gi|167387029|ref|XP_001737993.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898955|gb|EDR25679.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 199
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++ D IKLLLIG+SGVGKS LLLRFS+ +F +ITT+GIDF+++ IELD K++KLQIW
Sbjct: 2 SEKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIW 61
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTI ++YYRG MGI+LVYD+T SFNNI W+RNIE +A NVNKILVGNK
Sbjct: 62 DTAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNIEYWMRNIEANADQNVNKILVGNK 121
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D E KR V + +GQ +A++ GI F ETSAK +L V++ F S+ARD+ QR+ ++ A+
Sbjct: 122 CDA-EDKRVVTSVEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQRIGESSQSAQ 180
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P + Q Q + + CC
Sbjct: 181 PGIVDPTQ------QTQPTESTGCC 199
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ + + AD I F ETSAK NVE+ F ++A +IK+R+ + + + P
Sbjct: 124 DL-TSKKVIDYVTAKEYADALDIPFLETSAKNATNVEQAFLTMAAEIKKRMGPSSAASAP 182
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 159/219 (72%), Gaps = 19/219 (8%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+AP +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+
Sbjct: 1 MSAP------EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELE 54
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD ++ N++ W++ I+++A +
Sbjct: 55 GKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEG 114
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+LVGNK+D+ +K+ V ++ ++ ADE GI F ETSAK NVE+ F ++++ IK R
Sbjct: 115 VNKLLVGNKSDL-ATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDR 173
Query: 181 LADTDSRAEP---QTIKINQPDQAGGAAQAAQRSA--CC 214
+ + + P TIK G Q++A CC
Sbjct: 174 MGSSTMASGPGAKSTIK-------GLGQNVEQKTAGGCC 205
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 153/204 (75%), Gaps = 8/204 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL K+L+IGDSGVGKSCLLLRFSD F+ ++ITTIG+DFKI+T++++G+ IKLQIWD
Sbjct: 4 EFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFN+IR W+ IE +AS NV K+L+GNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQWLNEIEGNASPNVVKMLIGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D D +K AV T + A + G+KFFETSAK ++NVE F +A+DIK ++ +T R P
Sbjct: 124 DKDATK-AVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQDIKNQMKET-PRVTP 181
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ I +P+ Q + CC
Sbjct: 182 DNVAI-KPE-----VQQEPQPGCC 199
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 155/210 (73%), Gaps = 12/210 (5%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
ADYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 6 ADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 65
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++A + VNK+LVGNK
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYACEGVNKLLVGNK 125
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT---DS 186
+D+ +K+ V + + AD+ I F ETSAK+ NVE+ F ++A+ IK R+ + +
Sbjct: 126 SDL-TNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSA--CC 214
T+K+ G +Q+SA CC
Sbjct: 185 AGGKSTLKV------GAGQNVSQQSAGGCC 208
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 7/206 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++ +ITTIG+DFKIRT++LDGK +KLQIW
Sbjct: 3 SEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A++NV K+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTWLHEIDRYANENVVKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
AD+ +K+ V + AD GI+F ETSAK + NVE F ++AR+I Q+ A S
Sbjct: 123 ADL-TAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQKNASVQSG-- 179
Query: 190 PQTIKINQPDQAGGAAQAAQRSACCG 215
P+ K P AA+ + CCG
Sbjct: 180 PKGAK---PTVVPSAAKKESK-GCCG 201
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 150/205 (73%), Gaps = 11/205 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 15 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTA 74
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+
Sbjct: 75 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 134
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+K+ V + + AD+ I F ETSAK NVE+ F ++A +IK R+ +
Sbjct: 135 -TTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGSSH 193
Query: 193 IKINQ---PDQAGGAAQAAQRSACC 214
KIN P + G S CC
Sbjct: 194 DKINPSTTPVKPSG-------SGCC 211
>gi|448089189|ref|XP_004196738.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|448093406|ref|XP_004197769.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359378160|emb|CCE84419.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359379191|emb|CCE83388.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
Length = 205
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 150/210 (71%), Gaps = 10/210 (4%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
P+R+ YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE GK+I
Sbjct: 6 PSRS---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKI 62
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD +F N+ NW + QHA+++
Sbjct: 63 KLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVENWFHTVTQHANEDAQIF 122
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
LVGNK D DE R V GQALA + + F E SAK+N NV+ +F+ +A I+++ +T
Sbjct: 123 LVGNKCD-DEENRQVSKEDGQALASKLNVPFLEASAKSNENVDSIFYELASIIQEKHVNT 181
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
++ + ++Q GGA ++ +S CC
Sbjct: 182 ETNTASSGVDVSQ----GGA--SSFKSNCC 205
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T++ SF NI W+R I++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAKWLRYIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
NK DM E KR + KG+A+A ++ I F ETSAK N+N+EE F +A I Q+
Sbjct: 122 NKCDM-ELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQK 173
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 153/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++Y RGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYCRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + Q AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTCQEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 183 RPNLKIDSTPVKPAGG-------GCC 201
>gi|343475422|emb|CCD13178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 154/209 (73%), Gaps = 7/209 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LDGK IKLQIW
Sbjct: 3 SEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN+++W+ I++ AS++VNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSWLSEIDKFASESVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ +K+AV T Q AD GI F ETSAK NVE+ F +A++IK+R+A + +
Sbjct: 123 CDL-VTKKAVDTQMAQEFADSLGIPFLETSAKEAANVEKAFVEMAKNIKKRVAAQGASSG 181
Query: 190 PQTIKINQPDQAGGA----AQAAQRSACC 214
+P G + A+Q+ CC
Sbjct: 182 GAGSA--RPVLTGASRPANNTASQKGGCC 208
>gi|146419610|ref|XP_001485766.1| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
A P+RA YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE G
Sbjct: 3 ARAPSRA---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 59
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
K+IKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ W + + QHA+++
Sbjct: 60 KKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDLRSFENVETWYQTVTQHANEDA 119
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
LVGNK D D+S R V T +GQ LA + + F E SAK+N NV+ +F+ +A I+++
Sbjct: 120 QIFLVGNKCD-DDSSRQVSTEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQEKH 178
Query: 182 ADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
D D+ P I ++Q G ++ CC
Sbjct: 179 GDNDAGTGPSGIDVSQGSNTG------FKNNCC 205
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 153/206 (74%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRT+E++GK +KLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+ RAV TS QA A+E GI F ETSAK ++NVEE F +++ IK+ A + + E
Sbjct: 124 DLAEN-RAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALER 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+ + Q + + S CC +
Sbjct: 183 KPSNVVQMKGRPIQQEQQKSSRCCST 208
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 153/205 (74%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T ++I+TIG+DFKIRT+EL+GK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SF ++ W+ I+++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKGWLNEIDRYANENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A A
Sbjct: 124 DL-TSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEIKNRMASQPQMNAG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
P+ + + G +S+CC
Sbjct: 183 PRGNTV----RPGEGRSVNAKSSCC 203
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 150/184 (81%), Gaps = 12/184 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT+E++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI---KQRLADTDSRA 188
M+ ++ LA E+GI+FFETSAK++LNV+E F S+ARDI R + ++A
Sbjct: 125 MEVKRK---------LAREHGIRFFETSAKSSLNVDEAFSSLARDILLKSSRRSGNSNKA 175
Query: 189 EPQT 192
P T
Sbjct: 176 TPTT 179
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+ +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK +KLQI
Sbjct: 2 KPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++NW+ I+++A + V+K+LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGN 121
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K D+ SKR V +G+ AD ++F ETSAK NVE+ F +A +IK R+ ++
Sbjct: 122 KCDL-TSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQS 180
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
P P Q + S CC
Sbjct: 181 RPNANVRLGPSQPVRSVS----SGCC 202
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 155/212 (73%), Gaps = 9/212 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT++ SFNN++ W+ I+++A ++V+++LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVIVYDVTEQESFNNVKLWLDEIDRYACESVSRLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ++ V + Q L I F ETSAK + NVE+VF ++A DI QRL+ +
Sbjct: 124 DL-VGRKVVDAAAAQDLTSSLEISFLETSAKNSDNVEKVFLTMASDIHQRLSAEEGAIHQ 182
Query: 191 QT-------IKINQ-PDQAGGAAQAAQRSACC 214
Q+ KIN P GG Q + S CC
Sbjct: 183 QSRGAQTPRAKINSAPVWLGGEKQTQETSNCC 214
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 157/208 (75%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLL+IGDS VGKSCLLLRF+D S+ ++I+TIG+DFKIRT+EL+GK KLQIWD
Sbjct: 5 EYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWD 64
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ +V+K+LVGNK
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKC 124
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ ++K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK ++ T S++
Sbjct: 125 DLTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKS 183
Query: 189 EPQTIKIN-QPDQAGGAAQAAQRSACCG 215
+++++ QP Q Q + CCG
Sbjct: 184 AAESVQMKGQPIQ--------QNTNCCG 203
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 10/204 (4%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 122
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAEPQ 191
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 123 -TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 181
Query: 192 TIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 182 NLKIDSTPVKPAGG-------GCC 198
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 149/188 (79%), Gaps = 4/188 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+ +LLRFSD F +FI+TIGIDFKIRT+++DGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+T++ SFNNI+ W++NI++HA+++V K+L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIKTWMQNIDEHANNDVEKMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK---QRLADTDSRA 188
+DE KR + +G LA+ + I F ETSAK+N+N+ E F ++A IK +R D ++
Sbjct: 125 VDE-KRQISFQQGLQLANSHNILFMETSAKSNINITEAFEALATGIKVKMERNMDLNNPP 183
Query: 189 EPQTIKIN 196
T IN
Sbjct: 184 REDTKNIN 191
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 150/194 (77%), Gaps = 2/194 (1%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+R I++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-KQRLADTDS 186
NK DM E KR + +G+A+A ++ I+F ETSAKTN+N+E F +A I +++A D
Sbjct: 122 NKCDM-EDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQMAGKDQ 180
Query: 187 RAEPQTIKINQPDQ 200
+K+ P++
Sbjct: 181 AENQDRLKVLPPEK 194
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 10/204 (4%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 120
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAEPQ 191
+K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 121 -TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 179
Query: 192 TIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 180 NLKIDSTPVKPAGG-------GCC 196
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 151/205 (73%), Gaps = 6/205 (2%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YDYL K+LL+GDS VGKSCLLLRF++ S+ S+I+TIG+DFKI+T+ELDGK IK QIW
Sbjct: 4 AEYDYLFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIW 63
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERF+T+T++YYRGA GI++VYD+TD SF+++++W+ IE++ SDNVN ILVGNK
Sbjct: 64 DTAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLTEIERYTSDNVNMILVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
D+ E KRAV +A A++ GI F ETSAK NVE+ F ++AR+IK+R+ +
Sbjct: 124 CDLAE-KRAVEQQMAKAFANDVGIPFLETSAKDATNVEQAFLTMAREIKKRVGGQTTSNN 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
Q I G Q Q++ CC
Sbjct: 183 SQ---IGTVQMKGKPLQ--QKNNCC 202
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 142/166 (85%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+L YD+TDE SF NI+NW+++I ++AS V +L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 146/183 (79%), Gaps = 4/183 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD ++K+LL+GDSGVGKSCLL+RF + FT +FITTIGIDFKI+T++++GKR+KLQ+WD
Sbjct: 16 NYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLWD 75
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGI+L+YDVTDE +F NIR W + QHAS++V +LVGNK
Sbjct: 76 TAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQHASEDVVMLLVGNKK 135
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
DMD R V +G+ALA E GI F E SAK + NV E+FF++A+ I++++ D + +A
Sbjct: 136 DMD--TRTVSYEQGEALAKELGIPFIEASAKDDTNVSEIFFTLAKLIQEKIDDGKMEGKA 193
Query: 189 EPQ 191
E +
Sbjct: 194 EKE 196
>gi|71410660|ref|XP_807614.1| small GTP-binding protein Rab1 [Trypanosoma cruzi strain CL Brener]
gi|70871653|gb|EAN85763.1| small GTP-binding protein Rab1, putative [Trypanosoma cruzi]
Length = 210
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LDGK +KLQIW
Sbjct: 3 AEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ I++ AS+NVNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKFASENVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ K+AV T + AD GI F ETSAK NVEE F +A DIK+RL
Sbjct: 123 CDL-VLKKAVDTQMAKDFADNLGIPFLETSAKEASNVEEAFTRMAMDIKKRL 173
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 152/208 (73%), Gaps = 8/208 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
ADYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 6 ADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 65
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F+N++ W++ I+++A + VNK+LVGNK
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNK 125
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT---DS 186
+D+ +K+ V + + AD+ I F ETSAK+ NVE+ F ++A+ IK R+ + +
Sbjct: 126 SDL-TNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSACC 214
T+K+ AG CC
Sbjct: 185 AGGKSTLKVG----AGQNVSQQSNGGCC 208
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 149/208 (71%), Gaps = 14/208 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF D F SFITTIGIDFKI+T++++GK+ KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKTKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NIR W + + +HA+D+ +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIRQWFKTVNEHANDDAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ-----RLADTDS 186
MD R V +G+ LA E GI F E+SAK + NV E+FF++AR I++ +LA +
Sbjct: 137 MD--TRTVTYEQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQEKIDNDKLAGGAN 194
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSACC 214
I IN + + +S CC
Sbjct: 195 SGREGNININ-------SGSGSTKSGCC 215
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 152/208 (73%), Gaps = 8/208 (3%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
ADYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 6 ADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 65
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F+N++ W++ I+++A + VNK+LVGNK
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNK 125
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT---DS 186
+D+ +K+ V + + AD+ I F ETSAK+ NVE+ F ++A+ IK R+ + +
Sbjct: 126 SDL-TNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 187 RAEPQTIKINQPDQAGGAAQAAQRSACC 214
T+K+ Q G CC
Sbjct: 185 AGGKSTLKVGQ----GQNVSQQSNGGCC 208
>gi|407835694|gb|EKF99361.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 206
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
A+YD+L KLLLIGDSGVGKSCLLLRF+D S+T S+I+TIG+DFKIRT+ LDGK +KLQIW
Sbjct: 3 AEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYD TD SFNN++ W+ I++ AS+NVNK+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKFASENVNKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ K+AV T + AD GI F ETSAK NVEE F +A DIK+RL
Sbjct: 123 CDL-VLKKAVDTQMAKDFADNLGIPFLETSAKEASNVEEAFTRMAMDIKKRL 173
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 153/209 (73%), Gaps = 11/209 (5%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+ +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK +KLQI
Sbjct: 2 KPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++NW+ I+++A + V+K+LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKNWMMEIDKYAMEGVSKLLVGN 121
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K D+ SKR V +G+ AD ++F ETSAK NVE+ F +A +IK R+ ++
Sbjct: 122 KCDL-TSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQS 180
Query: 189 EPQ-TIKINQPDQAGGAAQAAQR--SACC 214
P ++I G +Q + S CC
Sbjct: 181 RPNANVRI-------GPSQPVRNVSSGCC 202
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+D +++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD +F+N+R W++ I++ A ++VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL A
Sbjct: 124 DL-VAKKVVDYNTAKAFADLLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-----ASQ 177
Query: 191 QTIKINQPDQAGGAAQAAQ-RSACC 214
T +++ G +Q Q +S CC
Sbjct: 178 PTQTVDRNKVVPGTSQPIQAKSGCC 202
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 150/194 (77%), Gaps = 2/194 (1%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+R I++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAKWLRYIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-KQRLADTDS 186
NK DM E KR V +G A+A ++GI+F ETSAKTN+N+E F +A I +++A D
Sbjct: 122 NKCDM-EDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAILNKQMAGKDL 180
Query: 187 RAEPQTIKINQPDQ 200
+++ P++
Sbjct: 181 AENQDRLRVLPPEK 194
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 153/210 (72%), Gaps = 5/210 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D ++ S+I+TIG+DFKIRT+E+DGK IKLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQWLSEIDKYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ES R V TS QA ADE GI F ETSAK ++NVEE F +++ IK+ A + E
Sbjct: 124 DLAES-RVVDTSVAQAYADEIGIPFLETSAKDSINVEEAFLAMSEAIKKSKAGSQGALER 182
Query: 191 QTIKINQPD----QAGGAAQAAQRSACCGS 216
+ + Q Q Q +S+CC +
Sbjct: 183 KASNLVQMKGQLIQQQQQQQQQNKSSCCST 212
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
D+ +K+ V + + AD I F ETSAK NVE+ F ++A +IK R+ R
Sbjct: 127 DL-TTKKVVDYTTAKEFADHLNIPFLETSAKNATNVEQAFMTMAAEIKNRMGPLPQR 182
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRT+E++GK +KLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+ RAV TS QA A E GI F ETSAK ++NVEE F +++ IK+ A + + E
Sbjct: 124 DLAEN-RAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALER 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+ + Q + + S CC +
Sbjct: 183 KPSNVVQMKGRPIQQEQQKSSRCCST 208
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 150/208 (72%), Gaps = 12/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A + K R+ P
Sbjct: 127 DL-TTKKVVDYTTAKEFADQLGIPFLETSAKNATNVEQAFMTMAAENKNRMG-------P 178
Query: 191 QTIKINQPDQAG----GAAQAAQRSACC 214
T + N G G + S CC
Sbjct: 179 PTTEANLRGGDGKINPGTPVQPRGSGCC 206
>gi|313242103|emb|CBY34279.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 142/179 (79%), Gaps = 3/179 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
D L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQIWD
Sbjct: 12 DNHLLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERF TITT+YYRGA GILLVYD+T +F+NI W+RNI +HAS++V ++L+GNK
Sbjct: 72 TAGQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIGNKC 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI--KQRLADTDSR 187
DM E KR + +G+ +A+E GIKFFETSAK N+N+E F S+A DI KQR + + R
Sbjct: 132 DM-EDKRLISEERGRKVAEENGIKFFETSAKENINIEIAFNSLAEDILNKQRPVEDNER 189
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIW
Sbjct: 27 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 86
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGNK
Sbjct: 87 DTAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQWLQEIDRYASEGVNKLLVGNK 146
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
+D+ SK+ V + + AD+ GI F ETSAK NVE+ F ++A+ IK ++
Sbjct: 147 SDL-TSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMG 198
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 154/212 (72%), Gaps = 21/212 (9%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T +A ADE GI F ETSAK ++NVE+ F ++A +IK++++
Sbjct: 124 DLVENK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMS-------- 174
Query: 191 QTIKINQP--DQAGGAAQA-----AQRSACCG 215
NQP + + G Q Q++ CCG
Sbjct: 175 -----NQPTANNSTGTVQMKGQPIEQKNNCCG 201
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT++LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SF+N++ W+ I+++A D+VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDSVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADTDSRAE 189
D+ +K+AV + + A++ GI F ETSAK + NVE+ F ++A +IK R+ +
Sbjct: 124 DL-TTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSAGAPA 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+KI+Q G R++CC
Sbjct: 183 AAAVKIDQ-----GRPIDTNRTSCC 202
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A P DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 7 AVPVAPGGWRDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK 66
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVN
Sbjct: 67 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVN 126
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
K+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 127 KLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 185
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 149/206 (72%), Gaps = 4/206 (1%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQI
Sbjct: 2 HTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQI 61
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT++YYRGA GI++VYDVTD +F N++ W++ I+++AS+ VNK+LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGN 121
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
K+D+ K+ V + + AD+ I F ETSAK NVE+ F ++A+ IK R+ S A
Sbjct: 122 KSDL-TGKKVVEYTVAKEFADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMG--SSSA 178
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
P K + G + Q CC
Sbjct: 179 APGAGK-SSTITPGQSVNQQQGGGCC 203
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK R+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI+ + + CC
Sbjct: 183 GQVKIDST-----PVSSKSGTGCC 201
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 147/181 (81%), Gaps = 3/181 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
+++ A A++ YD ++K+LL+GDSGVGKSCLL+RF + F+ SFITTIGIDFKI+T++++
Sbjct: 7 VSSSSANAKS-YDSIMKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDIN 65
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK++KLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F+NI+ W + QHA+D
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFSTVNQHANDE 125
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+LVGNK+DMD RAV T +G+ALA E GI F E SAK + NV ++FF +A+ I+++
Sbjct: 126 AQLLLVGNKSDMDT--RAVSTDQGEALAKELGIPFVEASAKDDTNVNDIFFLLAKLIQEK 183
Query: 181 L 181
+
Sbjct: 184 I 184
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 150/194 (77%), Gaps = 2/194 (1%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TIEL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF+NI W+R I++HA+++V K+++G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVEKMILG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-KQRLADTDS 186
NK DM E KR + +G+A+A ++ I+F ETSAKTN+N+E F +A I +++A D
Sbjct: 122 NKCDM-EDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQMAGKDQ 180
Query: 187 RAEPQTIKINQPDQ 200
+++ P++
Sbjct: 181 AENQDRLRVLPPEK 194
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 144/183 (78%), Gaps = 1/183 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+K V T +A ADE GI F ETSAK + NVE+ F ++A +IK++ + R
Sbjct: 124 DLVENK-VVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKWGASQLRPSR 182
Query: 191 QTI 193
Q +
Sbjct: 183 QEM 185
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 151/206 (73%), Gaps = 6/206 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SF N++ W++ I+++AS NV+K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVKTWLQEIDRYASTNVSKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ I F ETSAK NVE+ F ++A +IK+ + P
Sbjct: 124 DL-TNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEIKRAQGPDNGHVTP 182
Query: 191 --QTIKINQPDQAGGAAQAAQRSACC 214
T++I Q Q ++ CC
Sbjct: 183 GGNTVRITPSSQ---PLQQDKKKGCC 205
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 154/207 (74%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDES-SFNNIRNWIRNIEQHASDNVNKILVGNK 129
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQWLQEIDRYASENVNKLLVGNK 123
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRA 188
+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S
Sbjct: 124 SDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG 182
Query: 189 EPQTIKINQ-PDQAGGAAQAAQRSACC 214
E +KI+ P + G CC
Sbjct: 183 ERPNLKIDSTPVKPAGG-------GCC 202
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
Length = 210
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 156/208 (75%), Gaps = 15/208 (7%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 13 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 72
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F+N++ W + + +HA+D +LVGNK+D
Sbjct: 73 AGQERFRTITTAYYRGAMGIILVYDVTDERTFSNVKQWFKTVNEHANDEAQLLLVGNKSD 132
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP- 190
MD R V +G++LA E G+ F E+SAK + NV E+FF++A+ I++++ D++ A P
Sbjct: 133 MDT--RVVTYEQGESLAKELGLPFIESSAKNDDNVNEIFFTLAKLIQEKI-DSNKLAGPG 189
Query: 191 ----QTIKINQPDQAGGAAQAAQRSACC 214
I IN D GG+ +S CC
Sbjct: 190 NGKDANISINAKD--GGS-----KSNCC 210
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++ + S
Sbjct: 124 DLSD-KKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNTSSGNA 182
Query: 191 QTIKINQPDQA--GGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 NNANSGKSNVNLRGQSLTSNQANSCC 208
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++D+ K+LLIGDSGVGKSCLLLRF+D S+T + I+TIG+DFKI+T+ LDGK IKLQIWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI+LVYD TD+ SFNN++ W+ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIDRYACENVNKLLVGNKT 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
D+ +++ V T++ ++ A+ GI F ETSAK NVEE F S+ARDIK RLAD
Sbjct: 124 DL-VNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLAD 175
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 141/172 (81%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D +++ S+I+TIG+DFKIRTI+LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD TD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ +K+ V + + A++ GI F ETSAK NVE+ F ++A +IK R+
Sbjct: 124 DL-STKKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG 174
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 154/215 (71%), Gaps = 5/215 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+A ++ YD ++K+LLIGDSGVGKSCLL+RF + F+ SFITTIGIDFKI+T++++
Sbjct: 1 MSASGENSKQ-YDSIMKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDIN 59
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+IKLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F N++NW + + HA+D+
Sbjct: 60 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENVKNWFKTVSDHATDD 119
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+LVGNK DMD R V +G+AL E GI F E SAK + NV EVFF++A+ I+ R
Sbjct: 120 AQLLLVGNKCDMD--TRLVTHEQGEALGKELGIPFVEASAKDDTNVNEVFFTLAKLIQGR 177
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSA-CC 214
L D+ S A+ + N + S+ CC
Sbjct: 178 L-DSQSAADSTAGRGNSKGGVNINENGKKSSSNCC 211
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 153/206 (74%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERF+TIT++YY GA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADTDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMWPGAASGGE 182
Query: 190 PQTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 183 RPNLKIDSTPVKPAGG-------GCC 201
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 158/207 (76%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+EL+GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+V K+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL-ADTDSRAE 189
D+ ++K V + +A ADE GI F ETSAK +++VE+ F ++ +IK+++ + T +
Sbjct: 124 DLVDNK-VVDSLTAKAFADELGIPFLETSAKDSISVEQAFLTMTAEIKKKMGSQTTAGKS 182
Query: 190 PQTIKIN-QPDQAGGAAQAAQRSACCG 215
+T+++ QP Q+S CCG
Sbjct: 183 AETVQMKGQP--------IPQKSNCCG 201
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK +
Sbjct: 124 DL-TTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNTVGPPAPSGAS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI+ Q+ S CC
Sbjct: 183 GQVKIDST-----PVQSKSGSGCC 201
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 153/205 (74%), Gaps = 4/205 (1%)
Query: 10 ADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
++YDYL KLLLIGDSGVGKSCLLLRF++ ++T +I+TIG+DFKIRTIELDGK IKLQIW
Sbjct: 3 SEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIW 62
Query: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129
DTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN+ W++ I+++A+ V K+LVGNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATGGVMKLLVGNK 122
Query: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
+D+ + K+ V + + AD I ETSA + NVE+ FF++AR IK ++ + + +
Sbjct: 123 SDLKD-KKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQIKSQMVNNQAGSG 181
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ IN Q+ G +Q S+CC
Sbjct: 182 TEKASINLRGQSVG---GSQNSSCC 203
>gi|322698527|gb|EFY90296.1| small GTP-binding protein YPTI [Metarhizium acridum CQMa 102]
Length = 208
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
Query: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
PP I+LLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK
Sbjct: 3 PPHETNTASLAAIQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 62
Query: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK 123
+KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK
Sbjct: 63 VKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNK 122
Query: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+
Sbjct: 123 LLVGNKSDMSD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGT 181
Query: 184 TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
T + K + G +A ++CC
Sbjct: 182 TTA----NNTKPSVQVGQGQGVGSASSNSCC 208
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGD+GVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK R+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI+ + + CC
Sbjct: 183 GQVKIDST-----PVSSKSGTGCC 201
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 154/205 (75%), Gaps = 2/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK-QRLADTDSRAE 189
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK Q ++T+S
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNTNSGNA 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 GNAKGKSNVNLRGESLTSNQSNSCC 207
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 153/206 (74%), Gaps = 7/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+L +LLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQIWD
Sbjct: 4 EYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N++ W++ I+++A + VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLQEIDRYACEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL--ADTDSRA 188
D+ + K+ V + + AD+ I F ETSAK + NVE+ F ++A+ IK R A ++ +
Sbjct: 124 DLTQ-KKVVEYTVAKDFADQLSIPFLETSAKNSTNVEQAFLTMAKQIKDRTGSAPVNATS 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
T+K+ Q Q S CC
Sbjct: 183 NKATLKVGSSQN----VQQPQSSGCC 204
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRT+++DGK IKLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I ++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEINKYANDSVRKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE- 189
D+ ES R V T+ QA ADE GI F ETSAK ++NVEE F +++ IK+ A + E
Sbjct: 124 DLAES-RVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQGVLER 182
Query: 190 -PQTIKINQPDQAGGAAQAAQRSACCGS 216
P + + Q Q Q+S+CC +
Sbjct: 183 KPSNL-VQMRGQPIQQQQEKQKSSCCST 209
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I ++A +NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIARYACENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK R+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLNMPFLEASAKNVTNVEQAFMTMAAEIKNRVGPPAPSGPS 182
Query: 191 QTIKIN 196
+KI+
Sbjct: 183 GQVKID 188
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
++DYL KLLLIGDS VGKSC LLRF+D S+ S+I+TIG+DFKIRT+E++GK +KLQIWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V +LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRNVLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ E+ RAV TS QA A E GI F ETSAK ++NVEE F +++ IK+ A + + E
Sbjct: 124 DLAEN-RAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALER 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
+ + Q + + S CC +
Sbjct: 183 KPSNVVQMKGRPIQQEQQKSSRCCST 208
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 142/179 (79%), Gaps = 4/179 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF++ +FT S+++TIG+DFKIRTIEL+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTI AYYRGA GI++VYDVTD SF+N++ W++ IE++AS+NV K+L+GNK+D
Sbjct: 65 AGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYASENVKKLLIGNKSD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
+ E ++ V + ADE I F ETSAKT+ NVEE F ++++ IK+ + D EP
Sbjct: 125 LVE-RKVVAYGSAKEFADELAIPFIETSAKTSSNVEEAFLTMSKQIKESV---DIAPEP 179
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 151/205 (73%), Gaps = 6/205 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF++ ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN+ W++ I+++A+ V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATSGVMKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD GIKF ETSA + NVE+ F +++ IK ++A+ ++P
Sbjct: 124 DLTD-KKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAFIVMSKQIKSQMAN----SQP 178
Query: 191 QTIKINQPD-QAGGAAQAAQRSACC 214
+ +P G + Q+ CC
Sbjct: 179 ASNTAGKPSVNLSGTSVINQQGGCC 203
>gi|353464471|gb|AER06797.1| putative rab GTPase [Rhizoctonia solani]
Length = 175
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 136/172 (79%), Gaps = 15/172 (8%)
Query: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
++T SFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT
Sbjct: 1 AWTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 60
Query: 99 DESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
DE SFNNIR W N+EQHAS+ VNKIL+GNK+D + K+A+ +G+ALADE GIKF ET
Sbjct: 61 DEKSFNNIRTWHANVEQHASEGVNKILIGNKSDWVD-KKAITEEQGRALADELGIKFMET 119
Query: 159 SAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPD--QAGGAAQAA 208
SAK N VE+ FF++ARDIK RL D+ QPD QAGGA + A
Sbjct: 120 SAKANEGVEDAFFALARDIKTRLIDS------------QPDAGQAGGATEGA 159
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 154/210 (73%), Gaps = 18/210 (8%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
MD R V +G+ALA E G+ F E+SAK + NV E+FF++AR I++++ D++ + P
Sbjct: 137 MD--TRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKI-DSNKLSGPN 193
Query: 192 -------TIKINQPDQAGGAAQAAQRSACC 214
+I N+ D + +S CC
Sbjct: 194 SGKDGNISINANKGD--------SSKSNCC 215
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 1/204 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK + + +
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAHMVNNNVGTAA 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ G + + Q ++CC
Sbjct: 183 GNKGKTNVNLRGESLTSNQSNSCC 206
>gi|384483936|gb|EIE76116.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 212
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 155/214 (72%), Gaps = 15/214 (7%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI-- 68
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIEL+GK +KLQI
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIKN 63
Query: 69 -------WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
WDTAGQERFRTIT++YYRGA GI++VYDVTD+ SF +++ W++ I+++A++ V
Sbjct: 64 SLVISLQWDTAGQERFRTITSSYYRGAHGIIVVYDVTDDDSFQHVKQWLQEIDRYAAEGV 123
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
NK+LVGNK+D+ + K+ V T + LA+ I ETSAK NVE+ F ++A+ IK R+
Sbjct: 124 NKLLVGNKSDLTD-KKVVSTEQANELAESIKIPLLETSAKDATNVEQAFLTMAKQIKDRM 182
Query: 182 ADTDSRAEPQ-TIKINQPDQAGGAAQAAQRSACC 214
T + + + T+K+ Q G + + Q CC
Sbjct: 183 GSTMQQTQAKSTVKVGQ----GASLEPKQAGGCC 212
>gi|342873298|gb|EGU75501.1| hypothetical protein FOXB_13988 [Fusarium oxysporum Fo5176]
Length = 214
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
D +I LLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDTA
Sbjct: 18 DSVISLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTA 77
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+DM
Sbjct: 78 GQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDM 137
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
+ K+ V S + AD GI F ETSAK NVE+ F ++AR IK+R+ T
Sbjct: 138 SD-KKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTT 188
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 152/205 (74%), Gaps = 2/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++ + +
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNANAGNV 182
Query: 191 QTIKINQPDQAGGAAQAA-QRSACC 214
K G + A+ Q ++CC
Sbjct: 183 SNAKGKSNVNLRGESLASNQSNSCC 207
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 155/205 (75%), Gaps = 3/205 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK-QRLADTDSRAE 189
D+ + K+ V + + A+ I F ETSA ++ NVE+ F+++AR IK Q +++ + A
Sbjct: 124 DLSD-KKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQIKAQMTSNSGAGAS 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
K N + G + + Q ++CC
Sbjct: 183 GGNAKSN-VNLRGQSLTSNQSNSCC 206
>gi|260942787|ref|XP_002615692.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
gi|238850982|gb|EEQ40446.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
Length = 204
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 61
A P+R+ YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE +G
Sbjct: 3 AKAPSRS---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESNG 59
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNV 121
K+IKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD +F N+ NW + + QHA+++
Sbjct: 60 KKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARTFENVENWFQTVTQHANEDA 119
Query: 122 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
LVGNK+D DE R V +GQ LA I F E SAKTN NVE +F+ +A I+++
Sbjct: 120 QIFLVGNKSD-DEENRQVSREQGQQLASSLNIPFLEASAKTNENVESIFYELASLIQEKH 178
Query: 182 ADTD 185
D +
Sbjct: 179 IDEE 182
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
MD R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 MDT--RVVTADQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLIQEKI 184
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 145/193 (75%), Gaps = 4/193 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M PP DYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRT+ELD
Sbjct: 1 MFFPPPFCS---DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELD 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I+++A+D+
Sbjct: 58 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDS 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V K+LVGNK D+ E+K V T +A ADE GI F ETSAK + NVE+ F ++A +IK++
Sbjct: 118 VCKLLVGNKCDLVENK-VVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKK 176
Query: 181 LADTDSRAEPQTI 193
+ R Q +
Sbjct: 177 WGASQLRPSRQEM 189
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHATDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
MD R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 MD--TRVVTVDQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 146/202 (72%), Gaps = 5/202 (2%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI+LDGK +KLQIWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI++VYDVTD SFNN++NW+ I+++A + V+K+LVGNK D+
Sbjct: 94 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDL 153
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
SKR V +G+ AD ++F ETSAK NVE+ F +A +IK R+ ++ P
Sbjct: 154 -TSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNA 212
Query: 193 IKINQPDQAGGAAQAAQRSACC 214
P Q + S CC
Sbjct: 213 NVRLGPSQPVRSVS----SGCC 230
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 150/204 (73%), Gaps = 2/204 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYD+L KLLLIGDSGVGKSCLLLRF+D ++T+S+I+TIG+DFKIRTIE+DGK +KLQIWD
Sbjct: 4 DYDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SF+++ W++ I+++A + VNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRYACEGVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ ESK++V + + A++ I F ETSAK + NVE+ F ++A+ IK R+ T+S
Sbjct: 124 DL-ESKKSVEFNVAKEFAEQLNIPFLETSAKDSTNVEQAFLTMAKHIKDRMG-TNSVGSG 181
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K +G CC
Sbjct: 182 AGTKSGVKLSSGQQLDQQTSGGCC 205
>gi|302419185|ref|XP_003007423.1| GTP-binding protein SAS1 [Verticillium albo-atrum VaMs.102]
gi|261353074|gb|EEY15502.1| GTP-binding protein SAS1 [Verticillium albo-atrum VaMs.102]
Length = 229
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/159 (71%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+LIKLLLIGDSGVGKSC LLRFS+ SFT SFITTIGIDFKIRTIELDGKR+KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W+ VNKIL+GNK
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWVGKRRAARHRGVNKILIGNKC 125
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETS-AKTNLNVEE 168
D + R P ++GQ LADE GI F S + N+N+++
Sbjct: 126 DWEGQPRRFPGNRGQQLADELGIPFPRGSPPRANINIDQ 164
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 148/196 (75%), Gaps = 3/196 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLL+RF+D SF+ ++I+TIG+DFKIRTI+LDGK +KLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VY VTD++SF N+++W++ IE +A+ VN++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKC 122
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +S RAV T A E+ + F ETSAK +NVE+ F +AR IK A S +
Sbjct: 123 DLPKS-RAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSSN 181
Query: 191 QTIKINQP-DQAGGAA 205
T+ QP ++GG
Sbjct: 182 VTVNSTQPVTKSGGCC 197
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 154/206 (74%), Gaps = 4/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++A + A
Sbjct: 124 DLAD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMASNSNVGNA 182
Query: 189 EPQTIKINQPDQAGGAAQAAQRSACC 214
K N + G + + Q ++CC
Sbjct: 183 AGNKGKTN-VNLRGESLTSNQSNSCC 207
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A D+V ++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 179
D+ E K+ V TS + AD GI F ETSAK++ NVE+ F +A +IK+
Sbjct: 124 DLIE-KKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKK 171
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
Length = 218
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 152/212 (71%), Gaps = 7/212 (3%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A + A +YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T+++ G+
Sbjct: 14 ANSSTAAKNYDSVMKILLIGDSGVGKSCLLVRFVENKFNPSFITTIGIDFKIKTLDIQGR 73
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
+IKLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NIR W + +HA++ V
Sbjct: 74 KIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFQNIRQWYSTVNEHANEQVQ 133
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
+LVGNK+D+ R V +G+ LA E G+ F E SAK + NV ++F +A+ I++++
Sbjct: 134 LLLVGNKSDL--GNRQVTKEQGEELARELGLPFMEASAKNDDNVNDLFLQLAKLIQEKI- 190
Query: 183 DTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
D D EP+T K N ++ + S+CC
Sbjct: 191 DNDEMGEPRTAKKN----VNIKSKDGKTSSCC 218
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD ++K+LLIGDSGVGKSCLL+RF D F SFITTIGIDFKI+T+E++GK+IKLQ+WD
Sbjct: 15 NYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVEINGKKIKLQLWD 74
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NIR W + + +HA+D +LVGNK+
Sbjct: 75 TAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQWFKTVTEHANDEAQLLLVGNKS 134
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
DMD RAV +G+ L+ E GI F E+SAK + NV E+F ++A+ I++++
Sbjct: 135 DMD--TRAVTYEQGEELSKELGIPFIESSAKNDENVNEIFSTLAKLIQEKI 183
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 153/208 (73%), Gaps = 5/208 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIE++GK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT++ SFNN++ W+ I+++A +NV+K+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V + + I ETSAK NVE+ F ++A +I++R+ + E
Sbjct: 124 DLS-SKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLAMASEIQKRIGADSVQNET 182
Query: 191 QTI--KINQPDQAGGAAQ--AAQRSACC 214
I KIN GA + A + S+CC
Sbjct: 183 VKIGSKINSAPLWPGAEKSVAEEVSSCC 210
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A D+V ++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 179
D+ E K+ V TS + AD GI F ETSAK++ NVE+ F +A +IK+
Sbjct: 124 DLIE-KKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKK 171
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 140/157 (89%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK+D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKSD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
M E+KR VP + LA E+GI+FFETSAK+++NV+E
Sbjct: 125 M-EAKRKVPGEQADKLAREHGIRFFETSAKSSMNVDE 160
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDS VGKSCLLLRF+D S+ S+I+TIG+DFKIRTIEL+GK +K + WD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELEGKSVKYRFWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVT+ SFNN++ W+ I ++A+D+V K+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEINRYANDSVCKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
D+ E+ R V T GQALADE GI F ETSAK +NVE+ F ++A +IK+++ +
Sbjct: 124 DLVEN-RVVDTQMGQALADELGIPFLETSAKDAVNVEKAFLTMAGEIKKKVGN 175
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 153/205 (74%), Gaps = 2/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD+L KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT-DSRAE 189
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++ + S A
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNASSGAG 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 GANASKSNVNLRGQSLTSNQSNSCC 207
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 138/177 (77%), Gaps = 1/177 (0%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +K
Sbjct: 2 ATMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W++ I+++A +NVNK+L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
VGNK D+ +K+ V S A + I F ETSAK + NVE+ F +A DI R+
Sbjct: 122 VGNKCDL-TTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMG 177
>gi|403072080|pdb|4FMD|F Chain F, Espg-Rab1 Complex Structure At 3.05 A
Length = 164
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 138/165 (83%), Gaps = 1/165 (0%)
Query: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWDTAGQER
Sbjct: 1 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 60
Query: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESK 136
FRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK D+ +K
Sbjct: 61 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTK 119
Query: 137 RAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+
Sbjct: 120 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 164
>gi|414588873|tpg|DAA39444.1| TPA: hypothetical protein ZEAMMB73_754957 [Zea mays]
gi|414588874|tpg|DAA39445.1| TPA: hypothetical protein ZEAMMB73_754957 [Zea mays]
Length = 126
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/128 (86%), Positives = 121/128 (94%), Gaps = 2/128 (1%)
Query: 89 MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148
MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTS+GQALA
Sbjct: 1 MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSRGQALA 60
Query: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAA 208
DEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLA++DS+ E +TI IN+P+ GG A A+
Sbjct: 61 DEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESDSKPEDRTISINRPE--GGEASAS 118
Query: 209 QRSACCGS 216
Q+SACCGS
Sbjct: 119 QKSACCGS 126
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 141/182 (77%), Gaps = 1/182 (0%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+ DYDYL K+LLIG+S VGKS LLLRFSD F+ SF+ TIG+DFKIRT ++ GK +K+QI
Sbjct: 4 QQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQI 63
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERF+TIT +YY+GA GI+L YD+TD+ SF +I NW+ +E+HAS+NV ++LVGN
Sbjct: 64 WDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVEKHASENVVRLLVGN 123
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
KAD+ ESKR V +G+ LAD GIKF E SAK N NV++ F ++A +IK ++ ++ +
Sbjct: 124 KADL-ESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDKP 182
Query: 189 EP 190
P
Sbjct: 183 TP 184
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 141/182 (77%), Gaps = 1/182 (0%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
+ DYDYL K+LLIG+S VGKS LLLRFSD F+ SF+ TIG+DFKIRT ++ GK +K+QI
Sbjct: 4 QQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQI 63
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERF+TIT +YY+GA GI+L YD+TD+ SF +I NW+ +E+HAS+NV ++LVGN
Sbjct: 64 WDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIENWLAEVEKHASENVVRLLVGN 123
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 188
KAD+ ESKR V +G+ LAD GIKF E SAK N NV++ F ++A +IK ++ ++ +
Sbjct: 124 KADL-ESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDKP 182
Query: 189 EP 190
P
Sbjct: 183 TP 184
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 151/206 (73%), Gaps = 3/206 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++ +
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNVNANAA 182
Query: 191 QTIKINQP--DQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 SGANAGKSNVNLRGQSLTSGQTNSCC 208
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 153/204 (75%), Gaps = 2/204 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++ ++ +
Sbjct: 124 DLSD-KKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMT-NNNNSSA 181
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 182 NGNNKSNVNLRGQSLNSNQSNSCC 205
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 150/207 (72%), Gaps = 11/207 (5%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A YD IKLL+IGDS VGK+ LLLR+++ +F+++FITTIGIDFKI+TI LDGKR+KLQ
Sbjct: 3 AHGPYDLQIKLLMIGDSAVGKTSLLLRYANDTFSSTFITTIGIDFKIKTINLDGKRVKLQ 62
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQE+FRTIT +Y+RGA GI+LVYD+TD +FN++R+W+ I +HA VNKILVG
Sbjct: 63 IWDTAGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRSWMAQINEHADGQVNKILVG 122
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK D + S R V +G+ LADEYG++F ETSAK N+NV E F +IA+ + R+ SR
Sbjct: 123 NKCD-NSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFRAIAQQVTSRIP---SR 178
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
A +K+ + GG + CC
Sbjct: 179 AAG-GVKLQSAAKPGG------KKGCC 198
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDTAGQER
Sbjct: 2 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 61
Query: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESK 136
F+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK DM E+K
Sbjct: 62 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAK 120
Query: 137 RAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
R V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 121 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 161
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 152/205 (74%), Gaps = 2/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK-QRLADTDSRAE 189
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK Q ++ +
Sbjct: 124 DLAD-KKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMARQIKAQMTSNANVGGA 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 AGNKGKSNVNLRGESLTSTQSNSCC 207
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 140/171 (81%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++
Sbjct: 124 DLSD-KKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQM 173
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 ME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 141/157 (89%), Gaps = 1/157 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFK++TI++DGK++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V+++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
+ E+KR V G+ LA ++GIKFFETSAK+++NVEE
Sbjct: 125 I-EAKRKVSRETGEKLAKDHGIKFFETSAKSSINVEE 160
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 ME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 140/171 (81%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK ++
Sbjct: 124 DLSD-KKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQM 173
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 140/170 (82%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 10 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 69
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F+NI+ W + + +HA+D +LVGNK+D
Sbjct: 70 AGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFKTVNEHANDEAQLLLVGNKSD 129
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
MD R V +G++LA E G+ F E+SAK + NV E+FF++A+ I++++
Sbjct: 130 MD--TRVVTYEQGESLAKELGLPFVESSAKNDDNVNEIFFTLAKLIQEKI 177
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 ME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 152/205 (74%), Gaps = 2/205 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T +I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A+ V K+LVGNKA
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK-QRLADTDSRAE 189
D+ + K+ V + + AD I F ETSA ++ NVE+ F+++AR IK Q + ++
Sbjct: 124 DLSD-KKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNANAGNA 182
Query: 190 PQTIKINQPDQAGGAAQAAQRSACC 214
+ + G + + Q ++CC
Sbjct: 183 ANAKGKSNVNLRGESLTSNQSNSCC 207
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LLIGDSGVGKSCLL+RF + F SFITTIGIDFKI+T++++GK++KLQ+WDT
Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++
Sbjct: 137 ME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTI LDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A D+V ++LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 179
D+ E K+ V T+ + AD GI F ETSAK++ NVE+ F +A +IK+
Sbjct: 124 DLIE-KKVVETNVAREYADSAGIPFLETSAKSSANVEDAFMIMASEIKK 171
>gi|145522135|ref|XP_001446917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833715|emb|CAI39332.1| rab_C73 [Paramecium tetraurelia]
gi|124414406|emb|CAK79520.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA+ A + ++D+LIK+LLIGDSGVGK+ +LLRF + +F ++++TIGIDFKI++I+++
Sbjct: 1 MASSMANKKENFDWLIKVLLIGDSGVGKTNVLLRFCENNFQPTYLSTIGIDFKIKSIDVE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+IK+QIWDTAGQERF+TIT YY+GAMGI+LVY + D SF NI+NW+ I+QHAS+N
Sbjct: 61 GKKIKMQIWDTAGQERFKTITQTYYKGAMGIILVYSIDDRESFKNIQNWMSQIKQHASEN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
V K+L+GNK D+ R V +G+ LA YG+ FFETSAK V + F++IA+ +K
Sbjct: 121 VCKLLIGNKIDV--PNRQVTKEEGEELAKSYGVSFFETSAKEGTQVSDAFYAIAKAVKAN 178
Query: 181 LAD--TDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
L++ T + + PQ IN Q AA + CC
Sbjct: 179 LSNEKTPNPSAPQNASINLT-QNNHAADEKKNGGCC 213
>gi|150865512|ref|XP_001384762.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
gi|149386768|gb|ABN66733.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
Length = 207
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 136/181 (75%), Gaps = 4/181 (2%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
A P+R+ YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE GK
Sbjct: 5 AAPSRS---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGK 61
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
+IKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ NW + + QHA+++
Sbjct: 62 KIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVDNWFQTVTQHANEDAQ 121
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
LVGNK D DES R V +GQ LA + I F E SAK+N NV+ +F+ +A I+ +
Sbjct: 122 IFLVGNKCD-DESNRQVSKEQGQELASKLNIPFLEASAKSNENVDSIFYELAGIIQDKHV 180
Query: 183 D 183
D
Sbjct: 181 D 181
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
Length = 206
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 140/171 (81%), Gaps = 2/171 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD ++K+LLIGDSGVGKSCLL+RF + F+ SFITTIGIDFKI+T++++GK++KLQ+WD
Sbjct: 7 NYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + HA+D+ +LVGNK+
Sbjct: 67 TAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNDHANDDAQLLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
DMD R V +G+ALA E G+ F E+SAK + NV E+FF++AR I+ ++
Sbjct: 127 DMDT--RLVTYEQGEALAKELGLPFVESSAKDDQNVNEIFFTLARLIQDKI 175
>gi|363755488|ref|XP_003647959.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891995|gb|AET41142.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 213
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD ++K+LL+GDSGVGKSCLL+RF + F+ SFITTIGIDFKI+T+++DGK+IKLQ+WDT
Sbjct: 17 YDSIMKVLLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDIDGKKIKLQLWDT 76
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYDVTDE +F NIR W + QHA+++ +LVGNK D
Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFSTVNQHATEDAQILLVGNKKD 136
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
MD RAV +G++LA E G+ F E SAK + NV ++FF++A+ I++++
Sbjct: 137 MD--TRAVTYEQGESLAKELGVPFIEASAKDDENVSDIFFTLAKIIQEKI 184
>gi|158343289|gb|ABW35317.1| Rab1B [Gymnochlora stellata]
Length = 206
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 148/207 (71%), Gaps = 7/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A +YDYL KLLLIGDSGVGKSCLLLRF+D ++T ++I+TIG+DFKIRTI+LDGK IKLQ
Sbjct: 6 AATEYDYLFKLLLIGDSGVGKSCLLLRFADQTYTPNYISTIGVDFKIRTIDLDGKTIKLQ 65
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A +NVNK+LVG
Sbjct: 66 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDIDSFNNVKQWLCEIDRYACENVNKLLVG 125
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM+ +AV + + AD+ I F ETSAKT VE F +A +IK R+A
Sbjct: 126 NKCDME--NKAVDYATAKHFADQLEIPFIETSAKTGDQVEFAFVKMAAEIKARVA----- 178
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
++P + K + + CC
Sbjct: 179 SQPASGKNEYDSGVNFSGNSVSGGGCC 205
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDT 67
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTIT++YYRGA GI++ YDVTD+ SFNN++ W++ I+++A +NVNK+LVGNK D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
+ +K+ V S A + I F ETSAK + NVE+ F +A DI R+
Sbjct: 128 L-TTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMG 177
>gi|193806493|sp|Q92928.2|RAB1C_HUMAN RecName: Full=Putative Ras-related protein Rab-1C; Short=hRab1c
gi|119578676|gb|EAW58272.1| hCG2011109 [Homo sapiens]
Length = 201
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 149/205 (72%), Gaps = 10/205 (4%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGKSCLLLRF+D +T S+I+TIG+DFKI+TIELDGK IKLQIWDT
Sbjct: 5 YDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF TIT++YYRGA G L+VYDVTD+ S+ N++ W++ I++HAS+NVNK+LVGNK+D
Sbjct: 65 AGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAEP 190
+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+++ S E
Sbjct: 125 L-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGER 183
Query: 191 QTIKINQ-PDQAGGAAQAAQRSACC 214
+KI+ P + G CC
Sbjct: 184 PNLKIDSTPVKPAGG-------GCC 201
>gi|344228933|gb|EGV60819.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 203
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 148/210 (70%), Gaps = 12/210 (5%)
Query: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
P+R+ YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE GK+I
Sbjct: 6 PSRS---YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKI 62
Query: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKI 124
KLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ NW + + QHA+++
Sbjct: 63 KLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARSFENVDNWYQTVTQHANEDAQIF 122
Query: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
LVGNK D D R V T +GQ LA I F E SAK+N+NV+ +F+ +A I+ + D
Sbjct: 123 LVGNKCD-DSEGRQVSTEQGQELAARLNIPFLEASAKSNINVDSIFYELASIIQDKNVD- 180
Query: 185 DSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
AEP+ K D + G A +++CC
Sbjct: 181 ---AEPEK-KSTGIDVSKG---ALSKNSCC 203
>gi|149246283|ref|XP_001527611.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447565|gb|EDK41953.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 208
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 138/183 (75%), Gaps = 2/183 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M++ + +RA YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTI+
Sbjct: 1 MSSKGSSSRA-YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIDSK 59
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+IKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N++NW + + QHA++
Sbjct: 60 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARSFENVQNWFQTVSQHANEE 119
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
LVGNK D DE R V +G+ LA + I F E SAKTN NVE +F+ +A I+++
Sbjct: 120 AQIFLVGNKCD-DEENRQVSREQGEELAQKLQIPFLEASAKTNQNVESIFYELAGIIQEK 178
Query: 181 LAD 183
D
Sbjct: 179 HVD 181
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 147/204 (72%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ ++ I+++A +NVNK LVG+K
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVVVYDVTDQDSFNNLKQRLQEIDRYACENVNKPLVGDKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ + F E SAK NVE+ F ++A +IK R+
Sbjct: 124 DL-TTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPS 182
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
+KI+ Q+ S CC
Sbjct: 183 GQVKIDST-----PVQSKSGSGCC 201
>gi|169599378|ref|XP_001793112.1| hypothetical protein SNOG_02508 [Phaeosphaeria nodorum SN15]
gi|160704592|gb|EAT90720.2| hypothetical protein SNOG_02508 [Phaeosphaeria nodorum SN15]
Length = 832
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 150/209 (71%), Gaps = 14/209 (6%)
Query: 9 RADYDYLIKLLLIGD--SGVGKSCLLL-RFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
R +D+L+++ + D SG+ + ++ R + SFT SFITTIGIDFKIRTIELDGKR+K
Sbjct: 635 RIFHDFLVEVDELVDVRSGLERQQKVVDRIREDSFTPSFITTIGIDFKIRTIELDGKRVK 694
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNIR W N+EQHA++ VNKIL
Sbjct: 695 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKIL 754
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
+GNK D +E KRAV T +GQALADE ++N+NV++ F+S+A DIK+RL DT
Sbjct: 755 IGNKCDWEE-KRAVSTEQGQALADEL---------RSNINVDKAFYSLASDIKKRLIDT- 803
Query: 186 SRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+R +P QAG A CC
Sbjct: 804 ARTDPAAGPKVDVGQAGDANGGGMGGKCC 832
>gi|47209142|emb|CAF90455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 152/193 (78%), Gaps = 10/193 (5%)
Query: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
DYL KLLLIGDSGVGKSCLLLRF+DG++T S+I+TIG+DFKIRT+++DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADGAYTDSYISTIGVDFKIRTVDMDGKTVKLQIWDTA 60
Query: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
GQERFRTIT++YYRGA GI+LVYDVT+++SF+N+R W+ IE++A ++V+++LVGNK+D+
Sbjct: 61 GQERFRTITSSYYRGAHGIVLVYDVTEQASFDNVRLWMDEIERYACEDVSRLLVGNKSDL 120
Query: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQT 192
+++ V + Q LA I F ETSAK + NVE+VF ++A DI +RL+ AE
Sbjct: 121 -LAQKVVDAAAAQDLASCLKIPFLETSAKNSENVEKVFLTLASDIHRRLS-----AEGGG 174
Query: 193 IKINQPDQAGGAA 205
+ +QAGGA
Sbjct: 175 VH----EQAGGAG 183
>gi|255722273|ref|XP_002546071.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
gi|240136560|gb|EER36113.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
Length = 211
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 148/219 (67%), Gaps = 13/219 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+ +RA YD ++KLLL+GDSGVGKSCLLLRF + F SFITTIGIDFKIRTIE
Sbjct: 1 MSGKGTSSRA-YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESK 59
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ NW + + QHA+++
Sbjct: 60 GKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANED 119
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA-----R 175
LVGNK D DE R V +GQ LA + I F E SAK+N NV+ +F+ +A +
Sbjct: 120 AQIFLVGNKCD-DEVNRQVSKEQGQELAAKLNIPFLEASAKSNENVDSIFYELAGIIQEK 178
Query: 176 DIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+++ + +T I ++Q + ++ + CC
Sbjct: 179 HVEENVGNTTGGGASGGIDVSQSN------SGSKNNNCC 211
>gi|444319260|ref|XP_004180287.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
gi|387513329|emb|CCH60768.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 144/190 (75%), Gaps = 3/190 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
++A A+ +YD ++K+LLIGDSGVGKSCLL+RF D F SFITTIGIDFKI+TI+++
Sbjct: 7 VSASSGNAK-NYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTIDIN 65
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK+IKLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE++F NIR W + + +HA+
Sbjct: 66 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDENTFENIRTWFKTVNEHANGE 125
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
+LVGNK+DM+ R V +G++LA E GI F E+SAK + NV E+FF++ I+++
Sbjct: 126 AQLLLVGNKSDME--TRTVTYEQGESLAKELGIPFIESSAKDDKNVNEIFFTLTNLIQEK 183
Query: 181 LADTDSRAEP 190
+ P
Sbjct: 184 IDSNKMTETP 193
>gi|320584083|gb|EFW98295.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 202
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 146/214 (68%), Gaps = 12/214 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M+A A+ +D +KLLL+GDSGVGKSCLLLRF D F SFITTIGIDFKI+TIEL+
Sbjct: 1 MSANRAKT---FDKTMKLLLVGDSGVGKSCLLLRFVDDKFNPSFITTIGIDFKIKTIELN 57
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
G +IKLQ+WDTAGQERFRTITTAYYRGAMGI++VYDV DE+SF +++ W + + QHA D
Sbjct: 58 GSKIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVNQHAKDE 117
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
LVGNK D ES R V +G+ LA+E + F E SAK+ LNV EVF+ +A I ++
Sbjct: 118 AQLFLVGNKCDDTES-RQVSEKQGELLAEELNVPFMEASAKSGLNVNEVFYKLASLILEK 176
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
D D + +NQ A G S+CC
Sbjct: 177 NGD-DLAVPADKLNVNQQGSATG-------SSCC 202
>gi|449491717|ref|XP_004174631.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Taeniopygia
guttata]
Length = 181
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 134/193 (69%), Gaps = 31/193 (16%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEQ--------------- 109
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
G+ LA +GIKF ETSAK N+N+E FF++ARDIK ++L +
Sbjct: 110 ------------GEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 157
Query: 188 AEPQTIKINQPDQ 200
Q +KI Q Q
Sbjct: 158 GSNQGVKITQDQQ 170
>gi|242018600|ref|XP_002429762.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514774|gb|EEB17024.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 210
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 144/183 (78%), Gaps = 12/183 (6%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTS-----FITTIGIDFKIRTIELDGKRIKL 66
YDYL KLLLIGDSGVGK+ L F G TTS F+ GIDFK+RTI++DGK+IKL
Sbjct: 5 YDYLFKLLLIGDSGVGKTIL---FMIGIKTTSVNLLIFLVVAGIDFKVRTIDVDGKKIKL 61
Query: 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILV 126
QIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF NI+NWIRNIE++AS +V K+L+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLL 121
Query: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 186
GNK +++E KR V KG+ LA EYGIKF ETSAK +++V++ F+ +ARDIK A T+
Sbjct: 122 GNKCELEE-KRQVTKEKGEQLAIEYGIKFIETSAKASIHVQDAFYMLARDIK---AKTEK 177
Query: 187 RAE 189
+ E
Sbjct: 178 KLE 180
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 137/171 (80%), Gaps = 2/171 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD ++K+LLIGDSGVGKSCLL+RF + F+ SFITTIGIDFKI+T+E++GK+IKLQ+WD
Sbjct: 12 NYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLWD 71
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI W + + +HA+D+ +LVGNK
Sbjct: 72 TAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKWFKTVTEHANDDAQLLLVGNKN 131
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
DMD R V +G+ LA E G+ F E+SAK N NV ++F S+A+ I+ ++
Sbjct: 132 DMDT--RVVSCEQGEVLAKELGLPFVESSAKDNNNVSDIFLSLAKLIQDKI 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,117,460,805
Number of Sequences: 23463169
Number of extensions: 115519316
Number of successful extensions: 490437
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19049
Number of HSP's successfully gapped in prelim test: 7466
Number of HSP's that attempted gapping in prelim test: 441392
Number of HSP's gapped (non-prelim): 27718
length of query: 216
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 79
effective length of database: 9,144,741,214
effective search space: 722434555906
effective search space used: 722434555906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)