BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027949
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/206 (94%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQRL+DTDSRAEP
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
TIKI+Q DQA GA QA Q+SACCG+
Sbjct: 191 ATIKISQTDQAAGAGQATQKSACCGT 216
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/206 (93%), Positives = 200/206 (97%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DIKQRLADTD+RAEP
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEP 190
Query: 191 QTIKINQPDQAGGAAQAAQRSACCGS 216
QTIKINQ DQ G +QA Q+SACCG+
Sbjct: 191 QTIKINQSDQGAGTSQATQKSACCGT 216
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/207 (91%), Positives = 196/207 (94%), Gaps = 3/207 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
DMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD+D+R E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 191 Q-TIKINQPDQAGGAAQAAQRSACCGS 216
Q +I I DQ+G QAA +SACCGS
Sbjct: 191 QPSITIKPADQSGN--QAAAKSACCGS 215
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/214 (86%), Positives = 200/214 (93%), Gaps = 1/214 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
L +TD++AEPQ IKI + D A ++ A++SACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSS-TAEKSACC 213
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 359 bits (921), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 181/215 (84%), Positives = 198/215 (92%), Gaps = 1/215 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
Query: 181 LADTDSRAEPQTIKINQPD-QAGGAAQAAQRSACC 214
L ++D++AEPQ IKI + D ++ ++SACC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 311 bits (796), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 177/214 (82%), Gaps = 6/214 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F S+A+DIK+R
Sbjct: 121 VNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ DT + +PQ + QP G A ++ ACC
Sbjct: 180 MIDTPNE-QPQVV---QPGTNLG-ANNNKKKACC 208
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 304 bits (778), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 170/214 (79%), Gaps = 11/214 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YD+L+KLLLIGDSGVGKSCLLLRFSDGSFT SFI TIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNWIRNIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F +A+DIK+R
Sbjct: 121 VNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKR 179
Query: 181 LADTDSRAEPQTIKINQPDQAGGAAQAAQRSACC 214
+ DT N PD +++ CC
Sbjct: 180 MIDTP----------NDPDHTICITPNNKKNTCC 203
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 284 bits (726), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 168/218 (77%), Gaps = 6/218 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA P R DYD LIKLLL+GDSGVGKSCLLLRF+D FT+SFITTIGIDFKI+ +++D
Sbjct: 1 MARIPGRP--DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVD 58
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNW+RNIEQHASDN
Sbjct: 59 GKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDN 118
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNK D+ E KR V ++GQALADE+G +F+ETSAK N++VEE F ++A+D+ R
Sbjct: 119 VNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLAR 178
Query: 181 LADTDSRAEPQTIKINQPDQ----AGGAAQAAQRSACC 214
+ + + + Q G+ AQ +CC
Sbjct: 179 MEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N+EQHAS+NV KIL+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
E +R V +GQALADE G+KF E SAKTN+NV+E FF++AR+IK++ D ++ Q
Sbjct: 126 C-EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 268 bits (684), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE F+++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 159/191 (83%), Gaps = 5/191 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQP 198
+KI +
Sbjct: 184 GAGGPVKITES 194
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 159/191 (83%), Gaps = 5/191 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQP 198
+KI +
Sbjct: 184 GAGGPVKITES 194
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 266 bits (681), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 266 bits (681), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 191
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 266 bits (680), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 266 bits (680), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF E SAK+++NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 266 bits (680), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSR 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 AEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 263 bits (672), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+E KR V +G+ LA +YGIKF ETSAK+++NVEE F ++ARDI +L
Sbjct: 125 MNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 154/193 (79%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSR 187
++ KR V +G+ LA +GIKF ETSAK N+N+E FF++ARDIK ++L +
Sbjct: 125 AND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS--RA 188
D+ E+ RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A
Sbjct: 124 DLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP AQ++ CC +
Sbjct: 183 RPPTVQIRGQP--------VAQKNGCCST 203
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 159/212 (75%), Gaps = 13/212 (6%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ ++ YD LIKLLLIGDSGVGKSCLLLRF + FT SFITTIGIDFKIRTI++ +R+K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V IL
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD 185
VGNK D+DE KR V T +GQALAD++GI F E S+KTN+NVEE F+S+A I+ +A T
Sbjct: 122 VGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT- 179
Query: 186 SRAEPQTIKINQPDQAG-GAAQAAQRSA--CC 214
K N+ G A+ + SA CC
Sbjct: 180 --------KGNESGSGGINIAEGEENSASKCC 203
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 253 bits (647), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 160/207 (77%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR--A 188
D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A + +
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNAS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACC 214
+P T+++ QP AQ+S+CC
Sbjct: 183 KPATVQMRGQP--------VAQQSSCC 201
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 252 bits (643), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 155/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGID KI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRA 188
D+ +K V T +A ADE GI F ETSAK NV++ F ++A IK R+A + A
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+++CC S
Sbjct: 183 RPATVQIRGQP--------VNQKTSCCSS 203
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 20/212 (9%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ SK+ V S +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DL-TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMAS------- 175
Query: 191 QTIKINQPDQAGGAAQAAQR--------SACC 214
Q I P +AGG Q S+CC
Sbjct: 176 QPI----PTKAGGPVVRPQEGKPINSKSSSCC 203
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 158/205 (77%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + + AD+ GI F ETSAK NVE+ F ++A +IK R+ + ++
Sbjct: 127 DL-TTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDS 185
Query: 191 Q-TIKINQPDQAGGAAQAAQRSACC 214
+ ++KIN +A + CC
Sbjct: 186 KPSVKINS-----STPVSANKGGCC 205
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 246 bits (629), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + A+
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAK 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQQSGCCSS 202
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 246 bits (629), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 9/207 (4%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DM E KR V SKG+ +A E+ I+FFETSAK N+N+E+ F ++A DI Q+
Sbjct: 122 NKCDM-EDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTP----V 176
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
EP ++ GG CC
Sbjct: 177 KEPDRENVDISTTGGGTGL----KKCC 199
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS-RAE 189
D+ S++ V T +A ADE GI F ETSAK NVEE F ++ IK R+A + ++
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 PQTIKI-NQPDQAGGAAQAAQRSACCGS 216
P T++I QP Q+S CC S
Sbjct: 183 PPTVQIRGQP--------VNQQSGCCSS 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 13/208 (6%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIKINQP--DQAGGAAQAAQRSACC 214
E +KI Q+GG CC
Sbjct: 186 EKSNVKIQSTPVKQSGG--------GCC 205
>sp|P35281|RAB10_RAT Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=1 SV=1
Length = 200
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 151/207 (72%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TI IDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI+QHA+++V ++L+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLR 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 187
NK DMD KR VP KG+ +A E+ I+FFETSAK N+N+E+ F ++ DI ++ +
Sbjct: 122 NKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPN 180
Query: 188 AEPQTIKINQPDQAGGAAQAAQRSACC 214
+E D + G +S CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
D+ K+ V +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 124 DL-TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA 174
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 150/204 (73%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +KR V T + A+ GI+F ETSAK NVE+ F +A IK+R+A+ P
Sbjct: 124 DL-TAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANA-----P 177
Query: 191 QTIKINQPDQAGGAAQAAQRSACC 214
K G + S CC
Sbjct: 178 VAPKAGVKLTPGQQVPSNGGSKCC 201
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRA 188
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ T +
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 182
Query: 189 EPQTIKI-NQPDQAGGAAQAAQRSACC 214
E + I + P ++ G CC
Sbjct: 183 EKSNVNIQSTPVKSSGG-------GCC 202
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + LA E+GI+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 240 bits (613), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 155/207 (74%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAE 189
D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIKINQP--DQAGGAAQAAQRSACC 214
+KI+ QAGG CC
Sbjct: 183 RPNLKIDSTPVKQAGG--------GCC 201
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD+L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
M E+KR V + + LA E+ I+FFETSAK+++NV+E F S+ARDI
Sbjct: 125 M-EAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+D +++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEP 190
D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL + ++P
Sbjct: 124 DL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRL----TASQP 178
Query: 191 -QTIKINQPDQAGGAAQAAQRSACC 214
QT+ N+ G +A + +S CC
Sbjct: 179 TQTVDKNKV-VPGSSAPISPKSGCC 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,743,576
Number of Sequences: 539616
Number of extensions: 2750836
Number of successful extensions: 14396
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 631
Number of HSP's that attempted gapping in prelim test: 11775
Number of HSP's gapped (non-prelim): 1686
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)