Query 027950
Match_columns 216
No_of_seqs 166 out of 1802
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 05:43:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.5E-31 8.5E-36 194.4 11.0 142 56-201 7-160 (169)
2 4gpm_A Engineered protein OR26 100.0 2.7E-30 9.4E-35 188.8 16.4 155 23-181 7-164 (169)
3 2rfa_A Transient receptor pote 100.0 7.1E-29 2.4E-33 189.4 12.8 180 23-202 6-222 (232)
4 3hra_A Ankyrin repeat family p 100.0 3.3E-28 1.1E-32 181.7 13.3 179 22-200 7-201 (201)
5 4b93_B Ankyrin repeat domain-c 100.0 2.6E-28 8.7E-33 191.1 12.8 152 35-190 68-225 (269)
6 1oy3_D Transcription factor in 100.0 1.9E-28 6.5E-33 191.8 10.9 179 21-203 10-251 (282)
7 2f8y_A Notch homolog 1, transl 100.0 9.7E-28 3.3E-32 181.9 14.1 178 22-203 27-217 (223)
8 1ikn_D Protein (I-kappa-B-alph 100.0 6.9E-28 2.3E-32 184.6 12.9 178 21-202 9-209 (236)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-27 4.3E-32 185.1 14.4 168 32-203 35-216 (253)
10 3aji_A 26S proteasome non-ATPa 100.0 7.8E-28 2.7E-32 183.4 12.4 148 50-201 37-196 (231)
11 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.3E-27 1.8E-31 171.0 16.3 149 48-200 9-169 (169)
12 2f8y_A Notch homolog 1, transl 100.0 6.6E-27 2.3E-31 177.3 17.1 169 31-203 2-184 (223)
13 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-27 3.9E-32 186.3 12.9 171 27-202 10-191 (261)
14 2rfm_A Putative ankyrin repeat 99.9 1.5E-27 5.2E-32 177.2 12.3 149 48-200 30-190 (192)
15 3aji_A 26S proteasome non-ATPa 99.9 1.6E-27 5.5E-32 181.6 11.9 177 21-201 41-229 (231)
16 3v31_A Ankyrin repeat family A 99.9 5.9E-27 2E-31 170.2 13.7 145 52-200 2-158 (167)
17 1ihb_A P18-INK4C(INK6), cyclin 99.9 8.9E-27 3E-31 168.3 14.1 145 52-201 4-161 (162)
18 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-26 4.2E-31 180.4 15.9 148 52-203 2-160 (261)
19 3v30_A DNA-binding protein rfx 99.9 1.2E-27 4.3E-32 174.6 9.2 155 24-182 6-164 (172)
20 1yyh_A HN1;, notch 1, ankyrin 99.9 2.9E-27 9.9E-32 183.1 11.4 174 22-199 59-245 (253)
21 3d9h_A CDNA FLJ77766, highly s 99.9 2.3E-26 7.9E-31 181.2 16.5 138 49-190 55-197 (285)
22 1k1a_A B-cell lymphoma 3-encod 99.9 1E-26 3.5E-31 178.0 14.1 178 21-202 10-208 (241)
23 3b7b_A Euchromatic histone-lys 99.9 7.2E-27 2.5E-31 178.7 13.2 177 22-202 13-202 (237)
24 3d9h_A CDNA FLJ77766, highly s 99.9 6.9E-27 2.4E-31 184.2 13.2 176 22-202 61-247 (285)
25 3twr_A Tankyrase-2; ankyrin re 99.9 1.6E-26 5.4E-31 167.6 14.0 134 25-158 13-150 (165)
26 2etb_A Transient receptor pote 99.9 7.1E-28 2.4E-32 186.6 7.2 179 24-202 6-246 (256)
27 3f6q_A Integrin-linked protein 99.9 4.9E-27 1.7E-31 172.7 11.3 151 26-180 11-165 (179)
28 3f6q_A Integrin-linked protein 99.9 3.7E-26 1.3E-30 167.9 15.5 152 51-206 3-167 (179)
29 2dzn_A Probable 26S proteasome 99.9 8.2E-27 2.8E-31 177.3 12.3 173 26-202 8-200 (228)
30 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-26 4E-31 168.3 12.5 149 49-201 4-164 (165)
31 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.5E-27 8.6E-32 171.1 8.8 152 22-178 7-162 (162)
32 1d9s_A Cyclin-dependent kinase 99.9 4.6E-27 1.6E-31 165.4 9.8 127 47-178 6-136 (136)
33 3v30_A DNA-binding protein rfx 99.9 2.5E-26 8.6E-31 167.6 13.5 146 53-202 2-160 (172)
34 2pnn_A Transient receptor pote 99.9 1.9E-27 6.5E-32 186.0 7.9 185 21-205 14-261 (273)
35 3utm_A Tankyrase-1; tankyrase, 99.9 2.3E-26 8E-31 184.9 14.4 125 22-146 26-151 (351)
36 3jxi_A Vanilloid receptor-rela 99.9 1.8E-27 6.1E-32 184.7 7.0 181 22-202 7-250 (260)
37 3ljn_A Hypothetical protein; a 99.9 6.4E-27 2.2E-31 190.1 10.3 117 82-202 134-269 (364)
38 1s70_B 130 kDa myosin-binding 99.9 1.1E-26 3.6E-31 183.6 11.3 89 28-116 48-136 (299)
39 2y1l_E Darpin-8.4; hydrolase-i 99.9 8.5E-27 2.9E-31 169.9 9.9 151 22-176 16-169 (169)
40 1awc_B Protein (GA binding pro 99.9 9.1E-26 3.1E-30 161.7 15.1 133 53-190 2-140 (153)
41 2jab_A H10-2-G3; HER2, darpin, 99.9 4.1E-26 1.4E-30 160.5 13.0 126 47-176 8-136 (136)
42 4b93_B Ankyrin repeat domain-c 99.9 8.9E-27 3.1E-31 182.3 10.5 160 23-185 89-251 (269)
43 2dzn_A Probable 26S proteasome 99.9 2E-26 7E-31 175.1 11.5 165 22-190 38-215 (228)
44 2rfa_A Transient receptor pote 99.9 6.5E-26 2.2E-30 172.9 14.3 148 52-203 2-184 (232)
45 1s70_B 130 kDa myosin-binding 99.9 1.4E-25 4.7E-30 177.2 16.4 155 48-202 35-257 (299)
46 3b7b_A Euchromatic histone-lys 99.9 1E-25 3.5E-30 172.2 14.0 165 22-190 46-217 (237)
47 3kea_A K1L; tropism, ANK repea 99.9 2.6E-27 8.8E-32 186.7 4.9 175 22-202 33-220 (285)
48 2rfm_A Putative ankyrin repeat 99.9 2.2E-26 7.5E-31 170.9 9.6 152 21-176 36-190 (192)
49 1oy3_D Transcription factor in 99.9 2.4E-26 8.3E-31 179.8 10.3 167 22-192 47-264 (282)
50 3v31_A Ankyrin repeat family A 99.9 2.7E-26 9.4E-31 166.7 9.8 153 23-179 6-161 (167)
51 1k1a_A B-cell lymphoma 3-encod 99.9 2.1E-26 7.2E-31 176.3 9.5 165 22-190 48-223 (241)
52 3utm_A Tankyrase-1; tankyrase, 99.9 1.6E-25 5.5E-30 180.0 15.0 178 22-203 60-306 (351)
53 1wdy_A 2-5A-dependent ribonucl 99.9 2.2E-25 7.5E-30 174.2 14.9 180 23-202 42-245 (285)
54 1awc_B Protein (GA binding pro 99.9 2.8E-26 9.5E-31 164.5 8.8 138 26-164 8-148 (153)
55 1n11_A Ankyrin; clathrin, BAND 99.9 2.5E-25 8.7E-30 184.7 15.9 175 25-203 184-370 (437)
56 2vge_A RELA-associated inhibit 99.9 2.7E-25 9.3E-30 169.9 14.8 133 48-184 16-154 (229)
57 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-25 4.8E-30 157.9 12.1 117 48-164 5-124 (137)
58 3eu9_A Huntingtin-interacting 99.9 3.6E-25 1.2E-29 168.9 15.3 185 16-203 5-203 (240)
59 1bi7_B P16INK4A, MTS1, multipl 99.9 1.8E-26 6.2E-31 166.1 7.5 135 48-187 7-145 (156)
60 3aaa_C Myotrophin, protein V-1 99.9 1.9E-25 6.5E-30 154.4 12.3 112 50-161 4-118 (123)
61 2fo1_E LIN-12 protein; beta-ba 99.9 2E-25 6.7E-30 182.2 14.3 178 22-203 127-339 (373)
62 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.6E-25 8.7E-30 153.6 12.8 123 52-178 1-126 (126)
63 3kea_A K1L; tropism, ANK repea 99.9 1.1E-26 3.8E-31 183.1 6.5 150 47-202 25-186 (285)
64 4hbd_A KN motif and ankyrin re 99.9 2E-25 6.7E-30 175.2 13.0 150 47-200 105-273 (276)
65 1ikn_D Protein (I-kappa-B-alph 99.9 5.2E-25 1.8E-29 168.5 15.0 154 22-179 47-210 (236)
66 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.2E-25 1.1E-29 170.4 13.3 152 25-181 10-167 (239)
67 1n11_A Ankyrin; clathrin, BAND 99.9 1.6E-25 5.3E-30 185.9 12.3 176 23-202 17-204 (437)
68 1wdy_A 2-5A-dependent ribonucl 99.9 6.1E-25 2.1E-29 171.6 14.0 177 22-202 74-278 (285)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.5E-25 3.3E-29 156.7 13.9 132 53-190 2-140 (156)
70 3ljn_A Hypothetical protein; a 99.9 5.2E-25 1.8E-29 178.8 13.3 175 22-202 22-236 (364)
71 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-25 5.5E-30 160.7 8.1 139 24-164 6-148 (156)
72 3hra_A Ankyrin repeat family p 99.9 7.1E-24 2.4E-28 158.1 17.0 149 51-203 3-171 (201)
73 2fo1_E LIN-12 protein; beta-ba 99.9 7.7E-25 2.6E-29 178.7 12.1 172 27-200 100-302 (373)
74 3eu9_A Huntingtin-interacting 99.9 1.3E-24 4.6E-29 165.8 12.0 177 22-202 44-235 (240)
75 3deo_A Signal recognition part 99.9 7.6E-25 2.6E-29 161.7 9.6 110 50-160 41-154 (183)
76 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.9E-24 1.7E-28 140.2 12.3 93 52-144 1-93 (93)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.2E-25 1.4E-29 169.7 8.0 148 50-202 2-164 (239)
78 3ehr_A Osteoclast-stimulating 99.9 1.3E-24 4.5E-29 164.9 10.5 127 50-180 70-200 (222)
79 3jxi_A Vanilloid receptor-rela 99.9 1.9E-25 6.4E-30 173.3 5.6 149 29-181 58-253 (260)
80 2etb_A Transient receptor pote 99.9 2.9E-25 9.9E-30 171.9 6.3 145 31-179 57-247 (256)
81 1sw6_A Regulatory protein SWI6 99.9 3.3E-25 1.1E-29 177.9 6.3 156 37-202 114-308 (327)
82 2pnn_A Transient receptor pote 99.9 1.9E-24 6.4E-29 168.9 10.5 149 30-182 67-263 (273)
83 3t8k_A Uncharacterized protein 99.9 4.9E-26 1.7E-30 168.7 0.6 135 54-190 7-161 (186)
84 4g8k_A 2-5A-dependent ribonucl 99.9 4.4E-24 1.5E-28 171.6 12.0 169 22-190 27-246 (337)
85 4g8k_A 2-5A-dependent ribonucl 99.9 1.4E-23 4.8E-28 168.7 14.9 148 49-202 164-326 (337)
86 3t8k_A Uncharacterized protein 99.9 1.3E-23 4.4E-28 155.7 11.1 150 23-177 9-178 (186)
87 2vge_A RELA-associated inhibit 99.9 1.5E-25 5.2E-30 171.3 0.3 161 23-190 24-195 (229)
88 4hbd_A KN motif and ankyrin re 99.9 3.5E-24 1.2E-28 168.0 7.3 152 21-176 112-273 (276)
89 3ui2_A Signal recognition part 99.9 1.8E-23 6.2E-28 161.2 10.8 108 50-158 42-153 (244)
90 2b0o_E UPLC1; arfgap, structur 99.9 6.8E-23 2.3E-27 162.7 12.1 132 52-190 150-293 (301)
91 1bi7_B P16INK4A, MTS1, multipl 99.9 5.9E-24 2E-28 152.9 4.7 133 21-154 13-149 (156)
92 1d9s_A Cyclin-dependent kinase 99.9 9E-24 3.1E-28 148.5 5.5 123 21-144 13-136 (136)
93 2jab_A H10-2-G3; HER2, darpin, 99.9 4.2E-23 1.4E-27 145.1 8.6 121 22-142 16-136 (136)
94 2b0o_E UPLC1; arfgap, structur 99.9 2.5E-23 8.4E-28 165.2 7.5 135 24-161 155-298 (301)
95 3lvq_E ARF-GAP with SH3 domain 99.9 1.7E-22 5.8E-27 170.7 12.7 131 53-190 132-274 (497)
96 2l6b_A NR1C; ankyrin, consensu 99.9 5E-23 1.7E-27 140.4 6.7 104 49-152 5-111 (115)
97 3jue_A Arfgap with coiled-coil 99.9 3.2E-22 1.1E-26 162.7 12.3 125 50-178 196-326 (368)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-22 9.5E-27 138.2 8.7 118 27-144 9-126 (126)
99 1sw6_A Regulatory protein SWI6 99.9 7.7E-23 2.6E-27 164.1 5.1 159 21-189 132-322 (327)
100 1dcq_A PYK2-associated protein 99.9 3.4E-21 1.2E-25 151.2 14.3 124 53-180 130-265 (278)
101 3lvq_E ARF-GAP with SH3 domain 99.9 5.5E-22 1.9E-26 167.6 8.6 131 24-157 136-275 (497)
102 1dcq_A PYK2-associated protein 99.9 1.5E-21 5E-26 153.4 9.4 106 49-159 165-273 (278)
103 2zgd_A 3 repeat synthetic anky 99.8 2.6E-20 8.9E-25 126.1 12.7 95 44-138 15-109 (110)
104 3c5r_A BARD-1, BRCA1-associate 99.8 7.8E-21 2.7E-25 133.4 10.2 110 76-190 1-116 (137)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-20 8.5E-25 122.3 9.3 90 85-178 1-93 (93)
106 3aaa_C Myotrophin, protein V-1 99.8 1.9E-21 6.5E-26 134.1 4.0 109 21-129 8-116 (123)
107 3jue_A Arfgap with coiled-coil 99.8 3.6E-20 1.2E-24 150.6 9.1 134 25-158 204-346 (368)
108 2aja_A Ankyrin repeat family p 99.8 3.7E-22 1.3E-26 162.8 -3.9 143 50-201 89-249 (376)
109 3ehr_A Osteoclast-stimulating 99.8 5.4E-21 1.8E-25 144.9 2.8 127 22-148 75-202 (222)
110 3deo_A Signal recognition part 99.8 9.2E-20 3.1E-24 134.3 8.2 127 22-163 46-173 (183)
111 3ui2_A Signal recognition part 99.8 1.7E-19 6E-24 138.8 9.9 106 22-128 47-153 (244)
112 2aja_A Ankyrin repeat family p 99.8 8.4E-22 2.9E-26 160.7 -5.3 149 22-179 94-251 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.8 4E-19 1.4E-23 120.9 7.0 96 81-180 4-102 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 2.3E-17 7.9E-22 111.5 7.1 84 80-163 18-104 (110)
115 1gp8_A Protein (scaffolding pr 50.6 15 0.00052 18.7 2.5 18 56-73 16-33 (40)
116 3zrh_A Ubiquitin thioesterase 32.0 1.5E+02 0.0052 24.1 6.8 47 61-107 30-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.5e-31 Score=194.35 Aligned_cols=142 Identities=39% Similarity=0.521 Sum_probs=85.2
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 027950 56 QLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVY 135 (216)
Q Consensus 56 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~ 135 (216)
+|+.||..|+.++|+.|+++|+++|.+|..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcCC
Q 027950 136 NILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQAGS 201 (216)
Q Consensus 136 ~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g~ 201 (216)
++|+++|+++|.. |+||||+|+..+..+ ++++|++.|++++ ..+.||++.| .++++|++.|+
T Consensus 87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~----~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 87 KLLISKGADVNAKDSDGRTPLHHAAENGHKE----VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 6666666665543 666666666555433 3555666666553 3455666555 45566666655
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.7e-30 Score=188.80 Aligned_cols=155 Identities=32% Similarity=0.393 Sum_probs=139.0
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
.++..+..|+.+.++.++..+......+..|.||||+|+..++.++++.|++.|++++.++..|.||||+|+..|+.+++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 35667778999999998888887778889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |+|||++|+..+..+ ++++|+++|+++
T Consensus 87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~----iv~~Ll~~GA~i 162 (169)
T 4gpm_A 87 KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE----VVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHTC----
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCc
Confidence 9999999999999999999999999999999999999999999765 999999999988655 588999999998
Q ss_pred CC
Q 027950 180 TK 181 (216)
Q Consensus 180 ~~ 181 (216)
+.
T Consensus 163 e~ 164 (169)
T 4gpm_A 163 EH 164 (169)
T ss_dssp --
T ss_pred CC
Confidence 74
No 3
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=7.1e-29 Score=189.40 Aligned_cols=180 Identities=17% Similarity=0.195 Sum_probs=155.6
Q ss_pred cccccccCCCCcccccCCCC-CCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCC-----CccCCCCchHHHHHHHc
Q 027950 23 MRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDV-----NSIDLDGRTALHIAACE 96 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~-----~~~~~~g~t~L~~a~~~ 96 (216)
+++.....++.+.++.++.. +......+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 85 (232)
T 2rfa_A 6 PLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVIN 85 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHc
Confidence 34455567777888777766 5555566788999999999999999999999999876 56677899999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCC
Q 027950 97 GHVEVVKLLLSKKANIDARDR-------------WGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPRE 160 (216)
Q Consensus 97 ~~~~~~~~Ll~~g~~~~~~~~-------------~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~ 160 (216)
|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|+++|.. |.||||+|+..+
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 86 QNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQP 165 (232)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCS
T ss_pred CCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999998866 7999999999999999999999999998765 999999999998
Q ss_pred CcccccchhhHHHHhhcCC---------CCCCCcchHHH------HHHHHHHHcCCC
Q 027950 161 VPEYELNPLELQVRKADGI---------TKAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 161 ~~~~~~~~~~~l~~~g~~~---------~~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
..++...++++++..|++. +..+.||++.| .++++|++.|..
T Consensus 166 ~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 166 NKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 8877666779999999854 47899999998 688888888764
No 4
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=3.3e-28 Score=181.71 Aligned_cols=179 Identities=13% Similarity=0.187 Sum_probs=150.9
Q ss_pred ccccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
..++.....++.+.++.++..+. .....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 86 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTE 86 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 44556666788888877777666 44455778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC---CCCchhcccCCCC-cccccchhhHHHH
Q 027950 101 VVKLLL-SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG-AKVPKT---KRTPMTVANPREV-PEYELNPLELQVR 174 (216)
Q Consensus 101 ~~~~Ll-~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g-~~~~~~---g~t~l~~a~~~~~-~~~~~~~~~~l~~ 174 (216)
++++|+ ..+.+++..+..|.||||+|+..|+.+++++|+++| ++++.. |.||||+|+..+. .....++++++++
T Consensus 87 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~ 166 (201)
T 3hra_A 87 ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME 166 (201)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH
T ss_pred HHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH
Confidence 999999 568899999999999999999999999999999999 887654 9999999987654 2222456899999
Q ss_pred hhcCCC---CCCCcchHHH------HHHHHHHHcC
Q 027950 175 KADGIT---KAWPVPLIFV------HYVILLRQAG 200 (216)
Q Consensus 175 ~g~~~~---~~~~~~l~~~------~~~~~l~~~g 200 (216)
.|++++ ..+.||++.| .++++|++.|
T Consensus 167 ~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 167 NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999986 4567888887 5666666654
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=191.06 Aligned_cols=152 Identities=22% Similarity=0.236 Sum_probs=134.3
Q ss_pred ccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 027950 35 PIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDA 114 (216)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~ 114 (216)
.+..++..+......+.+|.||||+|+..|+.+++++|++.|++++..+..|.||+|+|+..++.+++++|++.|++++.
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC
Confidence 45556666666666788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchH
Q 027950 115 RDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLI 188 (216)
Q Consensus 115 ~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~ 188 (216)
+|..|+||||+|+..|+.+++++|+++|+++|.. |.||||+|+..+..+ ++++|+..|++++ ..+.||++
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~----~v~~Ll~~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF----VVELLLLHGASVQVLNKRQRTAVD 223 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH----HHHHHHHTTCCSCCCCTTSCCSGG
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999765 999999999988655 5889999999986 67889998
Q ss_pred HH
Q 027950 189 FV 190 (216)
Q Consensus 189 ~~ 190 (216)
.|
T Consensus 224 ~A 225 (269)
T 4b93_B 224 CA 225 (269)
T ss_dssp GS
T ss_pred HH
Confidence 87
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=1.9e-28 Score=191.76 Aligned_cols=179 Identities=22% Similarity=0.174 Sum_probs=151.7
Q ss_pred cccccccccCCCCcccccCCCCCCC---CCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcC
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDEL---TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG 97 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~ 97 (216)
..+++.....+..+.++.++..+.. ....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 89 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVR 89 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3445555667777777766554433 3455678999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCC-----------------------------------------------CCCCCCCCCCHHHHHHHcC
Q 027950 98 HVEVVKLLLSKKAN-----------------------------------------------IDARDRWGSTAAADAKYYG 130 (216)
Q Consensus 98 ~~~~~~~Ll~~g~~-----------------------------------------------~~~~~~~g~t~L~~a~~~g 130 (216)
+.+++++|++.|++ ++..+..|.||||+|+..|
T Consensus 90 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g 169 (282)
T 1oy3_D 90 AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK 169 (282)
T ss_dssp CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTT
T ss_pred CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcC
Confidence 99999999998765 6778889999999999999
Q ss_pred CHHHHHHHHHCCCCCCCC----CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHH
Q 027950 131 NVEVYNILKARGAKVPKT----KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLR 197 (216)
Q Consensus 131 ~~~~~~~Ll~~g~~~~~~----g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~ 197 (216)
+.+++++|+++|++++.. |.||||+|+..+..+ ++++|+..|++++ ..+.||++.| .++++|+
T Consensus 170 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~----~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 170 DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS----VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH----HHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 999999999999998653 899999999888654 5889999999986 4578999998 7899999
Q ss_pred HcCCCC
Q 027950 198 QAGSFN 203 (216)
Q Consensus 198 ~~g~~~ 203 (216)
+.|+..
T Consensus 246 ~~ga~~ 251 (282)
T 1oy3_D 246 AHGAPE 251 (282)
T ss_dssp HTTCCC
T ss_pred HcCCCc
Confidence 999863
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=9.7e-28 Score=181.92 Aligned_cols=178 Identities=19% Similarity=0.125 Sum_probs=132.1
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
.+++.+...+..+.++.++..+......+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+
T Consensus 27 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 106 (223)
T 2f8y_A 27 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 106 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred chHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHH
Confidence 34444555677777776666665555666777888888888888888888887765 67777777888888888888888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|+
T Consensus 107 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga 182 (223)
T 2f8y_A 107 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE----TAKVLLDHFA 182 (223)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH----HHHHHHHTTC
T ss_pred HHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH----HHHHHHHcCC
Confidence 888888888888888888888888888888888888888888877654 788888887766443 4677777777
Q ss_pred CCC---CCCCcchHHH------HHHHHHHHcCCCC
Q 027950 178 GIT---KAWPVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 178 ~~~---~~~~~~l~~~------~~~~~l~~~g~~~ 203 (216)
+++ ..+.||++.| .++++|++.|+..
T Consensus 183 ~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 183 NRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 765 4567777777 5777777777753
No 8
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=6.9e-28 Score=184.57 Aligned_cols=178 Identities=19% Similarity=0.149 Sum_probs=152.3
Q ss_pred cccccccccCCCCcccccCCCCCC----CCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHc
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDE----LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACE 96 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~ 96 (216)
..+++.....+..+.++.++.... .....+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 88 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQ 88 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 455566666778887777766554 3455677899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----CCCCchhcccCCCCccccc
Q 027950 97 GHVEVVKLLLSKKAN------IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPK----TKRTPMTVANPREVPEYEL 166 (216)
Q Consensus 97 ~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~----~g~t~l~~a~~~~~~~~~~ 166 (216)
|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++. .|.||||+|+..+..+
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~--- 165 (236)
T 1ikn_D 89 GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD--- 165 (236)
T ss_dssp TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH---
T ss_pred CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHH---
Confidence 999999999999876 466788899999999999999999999999999865 4899999999988654
Q ss_pred chhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 167 NPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 167 ~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
++++|+..|++++ ..+.||++.| .++++|++.|+.
T Consensus 166 -~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 166 -LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp -HHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred -HHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh
Confidence 5889999999986 5678999888 789999999985
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=1.3e-27 Score=185.14 Aligned_cols=168 Identities=18% Similarity=0.139 Sum_probs=136.2
Q ss_pred CCcccccCCCCCCCCCC-CCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCC
Q 027950 32 SLDPIRRSPVQDELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (216)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~ 110 (216)
..+.++.++..+..... .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|+
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 67777777766655443 47889999999999999999999999999999999999999999999999999999999986
Q ss_pred -CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCC
Q 027950 111 -NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAW 183 (216)
Q Consensus 111 -~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~ 183 (216)
+++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++|++.|++++ ..+
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD----AAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH----HHHHHHHTTCCTTCCCTTS
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCCcCCCC
Confidence 89999999999999999999999999999999998755 999999999887544 5788999999886 567
Q ss_pred CcchHHH------HHHHHHHHcCCCC
Q 027950 184 PVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 184 ~~~l~~~------~~~~~l~~~g~~~ 203 (216)
.||++.| .++++|++.|+..
T Consensus 191 ~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 191 ETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 8999888 6889999998763
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=7.8e-28 Score=183.38 Aligned_cols=148 Identities=28% Similarity=0.295 Sum_probs=71.5
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 116 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK 116 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34445555555555555555555555555544444455555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHH
Q 027950 130 GNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLR 197 (216)
Q Consensus 130 g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~ 197 (216)
|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|++++ ..+.||++.| .++++|+
T Consensus 117 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 117 NRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK----MVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH----HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH----HHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 5555555555555544332 445555554444222 2444444444443 2344444444 3444444
Q ss_pred HcCC
Q 027950 198 QAGS 201 (216)
Q Consensus 198 ~~g~ 201 (216)
+.|+
T Consensus 193 ~~ga 196 (231)
T 3aji_A 193 TQGA 196 (231)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 4444
No 11
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=5.3e-27 Score=171.02 Aligned_cols=149 Identities=29% Similarity=0.387 Sum_probs=129.5
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
.....+.++|++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHH
Q 027950 128 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVIL 195 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~ 195 (216)
..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..+.||++.| .++++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLE----IVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 999999999999999998765 999999999888554 5888999999875 5677888877 45666
Q ss_pred HHHcC
Q 027950 196 LRQAG 200 (216)
Q Consensus 196 l~~~g 200 (216)
|++.|
T Consensus 165 L~~~G 169 (169)
T 2y1l_E 165 LQKLN 169 (169)
T ss_dssp HHTC-
T ss_pred HHHcC
Confidence 65543
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=6.6e-27 Score=177.31 Aligned_cols=169 Identities=18% Similarity=0.140 Sum_probs=146.9
Q ss_pred CCCcccccCCCCCCCCCC-CCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCC
Q 027950 31 SSLDPIRRSPVQDELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 109 (216)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g 109 (216)
++.+.++.++..+..... .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 455666666666554444 3788999999999999999999999999999999999999999999999999999999997
Q ss_pred C-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CC
Q 027950 110 A-NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KA 182 (216)
Q Consensus 110 ~-~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~ 182 (216)
. +++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~ 157 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD----AAVVLLKNGANKDMQNNR 157 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTT
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH----HHHHHHHcCCCCCCcCCC
Confidence 6 89999999999999999999999999999999998754 999999999888654 5888999999886 56
Q ss_pred CCcchHHH------HHHHHHHHcCCCC
Q 027950 183 WPVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 183 ~~~~l~~~------~~~~~l~~~g~~~ 203 (216)
+.||++.| .++++|++.|+..
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 78999998 6889999998853
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=186.28 Aligned_cols=171 Identities=23% Similarity=0.212 Sum_probs=119.8
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHH
Q 027950 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (216)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll 106 (216)
....++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+
T Consensus 10 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 10 AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34455556665555555444555666777777777777777777777777777777777777777777777777777777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC--C
Q 027950 107 SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT--K 181 (216)
Q Consensus 107 ~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~--~ 181 (216)
+.|++++. +..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ .
T Consensus 90 ~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~ 164 (261)
T 2xai_A 90 QHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA----CVKKLLESGADVNQGK 164 (261)
T ss_dssp HTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH----HHHHHHHHTCCTTCCB
T ss_pred HCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHH----HHHHHHHcCCCCCCCC
Confidence 77777764 344777777777777777777777777777654 777777777766443 4666777777764 4
Q ss_pred CCCcchHHH------HHHHHHHHcCCC
Q 027950 182 AWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 182 ~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
.+.||+|.| .++++|++.|+.
T Consensus 165 ~g~t~Lh~A~~~~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 165 GQDSPLHAVARTASEELACLLMDFGAD 191 (261)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCChHHHHHHcCCHHHHHHHHHcCCC
Confidence 566777776 567777777764
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.5e-27 Score=177.21 Aligned_cols=149 Identities=19% Similarity=0.220 Sum_probs=132.5
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 34677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHH
Q 027950 128 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVIL 195 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~ 195 (216)
..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|++++ ..+.||++.| .++++
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSE----IVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH----HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 999999999999999998665 999999999887554 5888999999986 5677888877 46666
Q ss_pred HHHcC
Q 027950 196 LRQAG 200 (216)
Q Consensus 196 l~~~g 200 (216)
|++.|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 65543
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.6e-27 Score=181.64 Aligned_cols=177 Identities=24% Similarity=0.213 Sum_probs=155.0
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
..++......+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHE 120 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 34455556678888888877777666677888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|+
T Consensus 121 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga 196 (231)
T 3aji_A 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE----EAKFLVTQGA 196 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHH----HHHHHHHCCC
Confidence 999999999999999999999999999999999999999999999765 999999999888654 5889999999
Q ss_pred CCC---CCCCcchHHH------HHHHHHHHcCC
Q 027950 178 GIT---KAWPVPLIFV------HYVILLRQAGS 201 (216)
Q Consensus 178 ~~~---~~~~~~l~~~------~~~~~l~~~g~ 201 (216)
+++ ..+.||++.| .++++|.+.|+
T Consensus 197 ~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 197 SIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 986 5678888887 55666666553
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5.9e-27 Score=170.21 Aligned_cols=145 Identities=17% Similarity=0.176 Sum_probs=119.6
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
.|.||||+|+..|+.++++.|++.+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46788999999999999999998888888888888999999999999999999999999998888888999999999999
Q ss_pred HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHc
Q 027950 132 VEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQA 199 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~ 199 (216)
.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|++++ ..+.||++.| .++++|++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVK----CVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 99999999988888654 889999988877544 4778888888875 4567777777 455555554
Q ss_pred C
Q 027950 200 G 200 (216)
Q Consensus 200 g 200 (216)
+
T Consensus 158 ~ 158 (167)
T 3v31_A 158 L 158 (167)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=8.9e-27 Score=168.27 Aligned_cols=145 Identities=25% Similarity=0.289 Sum_probs=122.0
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
...+|||+|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|++.|++++..+..|+||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35689999999999999999999999888888889999999888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCC----CCCCCcchHHH------HHHHHHHH
Q 027950 132 VEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGI----TKAWPVPLIFV------HYVILLRQ 198 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~----~~~~~~~l~~~------~~~~~l~~ 198 (216)
.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++. +..+.||++.| .++++|++
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR----VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999888654 889999998877544 577888888763 35677888887 67788888
Q ss_pred cCC
Q 027950 199 AGS 201 (216)
Q Consensus 199 ~g~ 201 (216)
.|+
T Consensus 159 ~GA 161 (162)
T 1ihb_A 159 NGA 161 (162)
T ss_dssp TC-
T ss_pred hCC
Confidence 775
No 18
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=180.44 Aligned_cols=148 Identities=24% Similarity=0.260 Sum_probs=135.4
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC--CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcC
Q 027950 132 VEVYNILKARGAKVPKT--KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQAG 200 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~--g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g 200 (216)
.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..+.||++.| .++++|++.|
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVE----CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp HHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHH----HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999998755 999999999988654 5889999999986 4577999988 6889999998
Q ss_pred CCC
Q 027950 201 SFN 203 (216)
Q Consensus 201 ~~~ 203 (216)
+..
T Consensus 158 ~~~ 160 (261)
T 2xai_A 158 ADV 160 (261)
T ss_dssp CCT
T ss_pred CCC
Confidence 763
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=1.2e-27 Score=174.59 Aligned_cols=155 Identities=21% Similarity=0.256 Sum_probs=105.9
Q ss_pred ccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 24 RFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
++.+...++.+.++.++..+.. ....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 85 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIV 85 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHH
Confidence 3444455666666665555544 333455677777777777777777777777777777777777777777777777777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.. |.|||++|+..+..+ +++++++.+++.
T Consensus 86 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~----~~~~L~~~~~~~ 161 (172)
T 3v30_A 86 GLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRK----VQQVIENHILKL 161 (172)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH----HHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHH----HHHHHHHHHHHH
Confidence 7777777777777777777777777777777777777777776544 777777777666444 356666666655
Q ss_pred CCC
Q 027950 180 TKA 182 (216)
Q Consensus 180 ~~~ 182 (216)
...
T Consensus 162 ~~~ 164 (172)
T 3v30_A 162 FQS 164 (172)
T ss_dssp SCC
T ss_pred hcc
Confidence 433
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=2.9e-27 Score=183.13 Aligned_cols=174 Identities=19% Similarity=0.128 Sum_probs=151.5
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
.+++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+
T Consensus 59 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 59 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHH
Confidence 44455566788888888877777777778889999999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++|++.|+
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~----~v~~Ll~~ga 214 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE----TAKVLLDHFA 214 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH----HHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHH----HHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999765 999999999887554 5889999999
Q ss_pred CCC---CCCCcchHHH------HHHHHHHHc
Q 027950 178 GIT---KAWPVPLIFV------HYVILLRQA 199 (216)
Q Consensus 178 ~~~---~~~~~~l~~~------~~~~~l~~~ 199 (216)
+++ ..+.||++.| .++.++.+.
T Consensus 215 ~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 215 NRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred CccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 986 5678888887 455555443
No 21
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=2.3e-26 Score=181.22 Aligned_cols=138 Identities=24% Similarity=0.280 Sum_probs=75.7
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 027950 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (216)
Q Consensus 49 ~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~ 128 (216)
.+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 34455566666666666666666666665555555556666666666666666666666666666555556666666666
Q ss_pred cCCHHHHHHHHHCCCCCCCC--CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH
Q 027950 129 YGNVEVYNILKARGAKVPKT--KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~~~--g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~ 190 (216)
.|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|++++ ..+.||++.|
T Consensus 135 ~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE----CVNSLIAYGGNIDHKISHLGTPLYLA 197 (285)
T ss_dssp HTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHH----HHHHHHHTTCCTTCCBTTTBCHHHHH
T ss_pred cCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 55555555555555554332 555555555444322 2444444444443 2334444444
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=1e-26 Score=178.02 Aligned_cols=178 Identities=20% Similarity=0.148 Sum_probs=151.8
Q ss_pred cccccccccCCCCcccccCCC----CCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHc
Q 027950 21 NNMRFSFGRQSSLDPIRRSPV----QDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACE 96 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~ 96 (216)
.++++.....+..+.++.++. .+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 89 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH 89 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 345555566777777666543 4445555677899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----CCCCchhcccCCCCcccccch
Q 027950 97 GHVEVVKLLLSKKA----NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPK----TKRTPMTVANPREVPEYELNP 168 (216)
Q Consensus 97 ~~~~~~~~Ll~~g~----~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~----~g~t~l~~a~~~~~~~~~~~~ 168 (216)
++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++. .|.||||+|+..+..+ +
T Consensus 90 ~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~----~ 165 (241)
T 1k1a_A 90 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS----M 165 (241)
T ss_dssp TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH----H
T ss_pred CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHH----H
Confidence 99999999999987 8888999999999999999999999999999999864 3999999999887554 5
Q ss_pred hhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 169 LELQVRKADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 169 ~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
++++++.|++++ ..+.||++.| .++++|++.|+.
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 208 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 888899999986 5678999988 688899999885
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=7.2e-27 Score=178.68 Aligned_cols=177 Identities=21% Similarity=0.224 Sum_probs=137.9
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 92 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEV 92 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 34444555667777776666666555667778888888888888888888888888888888888888888888888888
Q ss_pred HHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 102 VKLLLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 102 ~~~Ll~~g-~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
+++|++.| .+++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|+
T Consensus 93 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~~~~Ll~~g~ 168 (237)
T 3b7b_A 93 VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVD----IAEILLAAKC 168 (237)
T ss_dssp HHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHH----HHHHHHTTTC
T ss_pred HHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHH----HHHHHHHcCC
Confidence 88888887 788888888888888888888888888888888887654 888888888776544 4777888888
Q ss_pred CCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 178 GIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 178 ~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
+++ ..+.||++.| .++.+|++.|+.
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 169 DLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202 (237)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred CCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC
Confidence 775 4567888877 677788877765
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=6.9e-27 Score=184.22 Aligned_cols=176 Identities=22% Similarity=0.198 Sum_probs=152.4
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~ 140 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDC 140 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHH
Confidence 34455566778888887777766666678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcC
Q 027950 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
+++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++
T Consensus 141 v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~ 215 (285)
T 3d9h_A 141 VNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA----CVKKLLESGAD 215 (285)
T ss_dssp HHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH----HHHHHHHTTCC
T ss_pred HHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH----HHHHHHHCCCC
Confidence 999999999998654 4999999999999999999999999998765 999999999888654 57888888988
Q ss_pred CC--CCCCcchHHH------HHHHHHHHcCCC
Q 027950 179 IT--KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 179 ~~--~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
++ ..+.||++.| .++++|++.|+.
T Consensus 216 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 216 VNQGKGQDSPLHAVVRTASEELACLLMDFGAD 247 (285)
T ss_dssp TTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 76 4678999988 688999998875
No 25
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.6e-26 Score=167.61 Aligned_cols=134 Identities=26% Similarity=0.364 Sum_probs=80.8
Q ss_pred cccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHH
Q 027950 25 FSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (216)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~ 103 (216)
+.....++.+.++.++..... ....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++++
T Consensus 13 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 92 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 92 (165)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHH
Confidence 344445555555555443322 2223444556666666666666666666666666666666666666666666666666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccC
Q 027950 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANP 158 (216)
Q Consensus 104 ~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~ 158 (216)
+|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.. |.||+++|+.
T Consensus 93 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 93 LLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 666666666666666666666666666666666666666665443 6666666555
No 26
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=7.1e-28 Score=186.64 Aligned_cols=179 Identities=18% Similarity=0.131 Sum_probs=143.1
Q ss_pred ccccccCCCCcccccCCC----CCCCCCC----CCccchHHHHHHHHc---CCHHHHHHHHhCCCCCCcc----------
Q 027950 24 RFSFGRQSSLDPIRRSPV----QDELTVP----ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSI---------- 82 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~t~L~~a~~~---g~~~~v~~Ll~~~~~~~~~---------- 82 (216)
++.+...++.+.++.+.. .+..... .+..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 6 L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 85 (256)
T 2etb_A 6 LFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTD 85 (256)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccccc
Confidence 344445566654443322 3333333 578899999999999 9999999999998776532
Q ss_pred -CCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHH---CCCCC
Q 027950 83 -DLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-------------GSTAAADAKYYGNVEVYNILKA---RGAKV 145 (216)
Q Consensus 83 -~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-------------g~t~L~~a~~~g~~~~~~~Ll~---~g~~~ 145 (216)
+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++ +|+++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 367999999999999999999999999999999886 9999999999999999999999 99999
Q ss_pred CCC---CCCchhcccC--CCCcc---cccchhhHHHHhhcCC----------CCCCCcchHHH------HHHHHHHHcCC
Q 027950 146 PKT---KRTPMTVANP--REVPE---YELNPLELQVRKADGI----------TKAWPVPLIFV------HYVILLRQAGS 201 (216)
Q Consensus 146 ~~~---g~t~l~~a~~--~~~~~---~~~~~~~~l~~~g~~~----------~~~~~~~l~~~------~~~~~l~~~g~ 201 (216)
|.. |+||||+|+. .+..+ +...++++|+..|+++ +..+.||++.| .++++|++.|.
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 765 9999999987 44332 1223678899988777 46789999998 67888888775
Q ss_pred C
Q 027950 202 F 202 (216)
Q Consensus 202 ~ 202 (216)
.
T Consensus 246 ~ 246 (256)
T 2etb_A 246 S 246 (256)
T ss_dssp H
T ss_pred C
Confidence 4
No 27
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=4.9e-27 Score=172.66 Aligned_cols=151 Identities=24% Similarity=0.245 Sum_probs=84.2
Q ss_pred ccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHH
Q 027950 26 SFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (216)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ 104 (216)
.....++.+.++.++.... .....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++
T Consensus 11 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (179)
T 3f6q_A 11 TQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQK 90 (179)
T ss_dssp HHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 3334444444444444322 223334455566666666666666666666666666655566666666666666666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC
Q 027950 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT 180 (216)
Q Consensus 105 Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~ 180 (216)
|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.. |.||+++|+..+.. .+++++++.|++++
T Consensus 91 Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~----~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 91 LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE----LLRERAEKMGQNLN 165 (179)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH----HHHHHHHHTTCCCS
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH----HHHHHHHHhhcCcc
Confidence 66666666666666666666666666666666666666665432 66666666544322 23455555555554
No 28
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=3.7e-26 Score=167.92 Aligned_cols=152 Identities=20% Similarity=0.155 Sum_probs=134.8
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 51 LDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 51 ~~~~t~L~~a~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
.++.++|+.|+..|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4578899999999999999999998 677999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHH
Q 027950 130 GNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLR 197 (216)
Q Consensus 130 g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~ 197 (216)
|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|++++ ..+.||++.| .++.+|+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQ----VAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999765 999999999888654 5889999999985 6788999887 6888999
Q ss_pred HcCCCCCcc
Q 027950 198 QAGSFNQEL 206 (216)
Q Consensus 198 ~~g~~~~~~ 206 (216)
+.|+.....
T Consensus 159 ~~g~~~~~~ 167 (179)
T 3f6q_A 159 KMGQNLNRI 167 (179)
T ss_dssp HTTCCCSCB
T ss_pred HhhcCcccC
Confidence 999864433
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=8.2e-27 Score=177.27 Aligned_cols=173 Identities=20% Similarity=0.196 Sum_probs=126.2
Q ss_pred ccccCCCCcccccCCCCCCCCC-CCCccchHHHHHHHHcCCHHHHHHHHhCC--CCCCc-cCCCCchHHHHHHHcCCHHH
Q 027950 26 SFGRQSSLDPIRRSPVQDELTV-PENLDSTMQLLFMACSGDVKGVEDLLNEG--IDVNS-IDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~--~~~~~-~~~~g~t~L~~a~~~~~~~~ 101 (216)
.....++.+.++.++..+.... ..+..|.||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+..|+.++
T Consensus 8 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (228)
T 2dzn_A 8 QACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEV 87 (228)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHH
Confidence 3344555565555544443333 25667888888888888888888888887 44444 66778888888888888888
Q ss_pred HHHHHhCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh
Q 027950 102 VKLLLSKK--ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA 176 (216)
Q Consensus 102 ~~~Ll~~g--~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g 176 (216)
+++|++.| ++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++++..|
T Consensus 88 ~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g 163 (228)
T 2dzn_A 88 VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK----LIELLCGLG 163 (228)
T ss_dssp HHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH----HHHHHHTTT
T ss_pred HHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH----HHHHHHhcC
Confidence 88888887 777888888888888888888888888888888887654 888888888776544 467777777
Q ss_pred -cCCC---CCCCcchHHH------HHHHHHH-HcCCC
Q 027950 177 -DGIT---KAWPVPLIFV------HYVILLR-QAGSF 202 (216)
Q Consensus 177 -~~~~---~~~~~~l~~~------~~~~~l~-~~g~~ 202 (216)
++++ ..+.||++.| .++++|+ +.|+.
T Consensus 164 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 164 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 6554 5677788777 5677777 66764
No 30
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.2e-26 Score=168.32 Aligned_cols=149 Identities=32% Similarity=0.362 Sum_probs=131.8
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 49 ENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 49 ~~~~~~t~L~~a~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
.+.++.++||.|+..|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 366789999999999999999999984 5677778888999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH-----HHHHHH
Q 027950 128 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV-----HYVILL 196 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~-----~~~~~l 196 (216)
..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..+.||++.| .++++|
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i~~~L 159 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE----ICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQDLL 159 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHHHHHH
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCChhHhHhcCChHHHHHH
Confidence 999999999999999999765 999999999988655 5888999999886 5788999887 688888
Q ss_pred HHcCC
Q 027950 197 RQAGS 201 (216)
Q Consensus 197 ~~~g~ 201 (216)
++.|+
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 88775
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=2.5e-27 Score=171.15 Aligned_cols=152 Identities=21% Similarity=0.187 Sum_probs=133.8
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
..++.....++.+.++.++..+......+..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|+.++
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 85 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT 85 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 34455566778888888777776666778889999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCC---CCCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK-VPK---TKRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~-~~~---~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
+++|++.|++++..+..|+||||+|+..|+.+++++|+++|++ ++. .|.|||++|+..+..+ ++++++++|+
T Consensus 86 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~----~~~~Ll~~GA 161 (162)
T 1ihb_A 86 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE----VVSLMQANGA 161 (162)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTC-
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH----HHHHHHHhCC
Confidence 9999999999999999999999999999999999999999997 344 3999999999988655 5788888887
Q ss_pred C
Q 027950 178 G 178 (216)
Q Consensus 178 ~ 178 (216)
+
T Consensus 162 d 162 (162)
T 1ihb_A 162 G 162 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 32
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4.6e-27 Score=165.41 Aligned_cols=127 Identities=23% Similarity=0.268 Sum_probs=117.2
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCCHHHH
Q 027950 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-GSTAAAD 125 (216)
Q Consensus 47 ~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~ 125 (216)
...+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|++.|++++.++.. |+||||+
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHD 84 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHH
Confidence 3446779999999999999999999999999999999999999999999 9999999999999999999999 9999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcC
Q 027950 126 AKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
|+..|+.+++++|+++|++++.. |.|||++|+..+..+ ++++|++.|++
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~----~~~~Ll~~Gad 136 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD----IARYLHAATGD 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHH----HHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH----HHHHHHHcCCC
Confidence 99999999999999999998765 999999999877544 57888888875
No 33
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=2.5e-26 Score=167.63 Aligned_cols=146 Identities=19% Similarity=0.212 Sum_probs=130.8
Q ss_pred chHHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 53 STMQLLFMACSGDVKGVEDLLNEGID-VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 53 ~~t~L~~a~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
+.+|||+|+..|+.+.++.|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 56899999999999999999999876 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHc
Q 027950 132 VEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQA 199 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~ 199 (216)
.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..+.||++.| .++++|++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVK----CVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 99999999999999764 999999999887554 5788999999986 5578899888 577778777
Q ss_pred CCC
Q 027950 200 GSF 202 (216)
Q Consensus 200 g~~ 202 (216)
|+.
T Consensus 158 ~~~ 160 (172)
T 3v30_A 158 ILK 160 (172)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.9e-27 Score=185.97 Aligned_cols=185 Identities=16% Similarity=0.152 Sum_probs=148.8
Q ss_pred cccccccccCCCCcccccCCCC---CCCCC-----CCCccchHHHHHHHHc---CCHHHHHHHHhCCCCC-------Cc-
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQ---DELTV-----PENLDSTMQLLFMACS---GDVKGVEDLLNEGIDV-------NS- 81 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~t~L~~a~~~---g~~~~v~~Ll~~~~~~-------~~- 81 (216)
...++.+...++.+.++.++.. ....+ ..+..|.||||+|+.. |+.+++++|++.|+++ +.
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~ 93 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNAS 93 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCC
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcc
Confidence 3455666778888877766541 12112 3467899999999987 9999999999987542 22
Q ss_pred ---cCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCC--------------CCCCHHHHHHHcCCHHHHHHHHH---C
Q 027950 82 ---IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR--------------WGSTAAADAKYYGNVEVYNILKA---R 141 (216)
Q Consensus 82 ---~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~--------------~g~t~L~~a~~~g~~~~~~~Ll~---~ 141 (216)
.+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|++ +
T Consensus 94 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 94 YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ 173 (273)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC
Confidence 466899999999999999999999999999999987 79999999999999999999999 9
Q ss_pred CCCCCCC---CCCchhcccCCCC-----cccccchhhHHHHhhcCC----------CCCCCcchHHH------HHHHHHH
Q 027950 142 GAKVPKT---KRTPMTVANPREV-----PEYELNPLELQVRKADGI----------TKAWPVPLIFV------HYVILLR 197 (216)
Q Consensus 142 g~~~~~~---g~t~l~~a~~~~~-----~~~~~~~~~~l~~~g~~~----------~~~~~~~l~~~------~~~~~l~ 197 (216)
|++++.. |+||||+|+..+. .++..+++++|+..|+++ +..+.||++.| .++++|+
T Consensus 174 gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 253 (273)
T 2pnn_A 174 PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYIL 253 (273)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHH
Confidence 9999765 9999999987543 222245688899988875 56789999998 7899999
Q ss_pred HcCCCCCc
Q 027950 198 QAGSFNQE 205 (216)
Q Consensus 198 ~~g~~~~~ 205 (216)
+.|+....
T Consensus 254 ~~ga~dp~ 261 (273)
T 2pnn_A 254 QREIHEPE 261 (273)
T ss_dssp HHHTC---
T ss_pred HCCCCCch
Confidence 99995443
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=2.3e-26 Score=184.89 Aligned_cols=125 Identities=27% Similarity=0.310 Sum_probs=99.7
Q ss_pred ccccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
..++...+.++.+.++.++..... ....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 445666667777777766655333 3344667888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~ 146 (216)
++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 106 iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (351)
T 3utm_A 106 VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 8888888888888888888888888888888888888888877654
No 36
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=1.8e-27 Score=184.70 Aligned_cols=181 Identities=17% Similarity=0.157 Sum_probs=145.4
Q ss_pred ccccccccCCCCcccccCCC----CCCCCCCCC----ccchHHHHHHH---HcCCHHHHHHHHhCCCC-----------C
Q 027950 22 NMRFSFGRQSSLDPIRRSPV----QDELTVPEN----LDSTMQLLFMA---CSGDVKGVEDLLNEGID-----------V 79 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~t~L~~a~---~~g~~~~v~~Ll~~~~~-----------~ 79 (216)
..++.+.+.++.+.++.++. .+......+ ..|.||||+|+ ..|+.+++++|++.|++ +
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 86 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPF 86 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccc
Confidence 34555666777776655544 333333222 56999999999 67999999999998743 3
Q ss_pred CccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCC--------------CCCCCHHHHHHHcCCHHHHHHHHH---CC
Q 027950 80 NSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD--------------RWGSTAAADAKYYGNVEVYNILKA---RG 142 (216)
Q Consensus 80 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~--------------~~g~t~L~~a~~~g~~~~~~~Ll~---~g 142 (216)
+..+..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|+..|+.+++++|++ +|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 4445589999999999999999999999999999998 689999999999999999999999 99
Q ss_pred CCCCCC---CCCchhcccCCCC-----cccccchhhHHHHhhcCC----------CCCCCcchHHH------HHHHHHHH
Q 027950 143 AKVPKT---KRTPMTVANPREV-----PEYELNPLELQVRKADGI----------TKAWPVPLIFV------HYVILLRQ 198 (216)
Q Consensus 143 ~~~~~~---g~t~l~~a~~~~~-----~~~~~~~~~~l~~~g~~~----------~~~~~~~l~~~------~~~~~l~~ 198 (216)
+++|.. |+||||+|+..+. .++..+++++|+..|+++ +..+.||++.| .++++|++
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 246 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999765 9999999985433 333356788999999865 46899999998 68889988
Q ss_pred cCCC
Q 027950 199 AGSF 202 (216)
Q Consensus 199 ~g~~ 202 (216)
.|..
T Consensus 247 ~g~~ 250 (260)
T 3jxi_A 247 REIA 250 (260)
T ss_dssp HHHH
T ss_pred hCCC
Confidence 8865
No 37
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=6.4e-27 Score=190.08 Aligned_cols=117 Identities=20% Similarity=0.169 Sum_probs=104.1
Q ss_pred cCCCCchHHHHHHHcC--CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCC---CCC
Q 027950 82 IDLDGRTALHIAACEG--HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK-----VPKT---KRT 151 (216)
Q Consensus 82 ~~~~g~t~L~~a~~~~--~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~-----~~~~---g~t 151 (216)
.+..|.||||+|+..| +.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++ +|.. |.|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 6678999999999999 99999999999999999999999999999999999999999999988 7654 999
Q ss_pred chhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 152 PMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 152 ~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
|||+|+..+..+ ++++|++.|++++ ..+.||++.| .++++|++.|..
T Consensus 214 ~L~~A~~~g~~~----~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 214 HLHWAILINWED----VAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp TTHHHHTTTCHH----HHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred HHHHHHHcCCHH----HHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 999999988655 5889999999986 5678999988 688899988754
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1.1e-26 Score=183.63 Aligned_cols=89 Identities=22% Similarity=0.276 Sum_probs=49.5
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHh
Q 027950 28 GRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (216)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~ 107 (216)
...|+.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus 48 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 127 (299)
T 1s70_B 48 CSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLIS 127 (299)
T ss_dssp HHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 33455555555444444434444555566666666666666666666555555555555666666666666666666665
Q ss_pred CCCCCCCCC
Q 027950 108 KKANIDARD 116 (216)
Q Consensus 108 ~g~~~~~~~ 116 (216)
+|++++..+
T Consensus 128 ~g~~~~~~~ 136 (299)
T 1s70_B 128 QGAHVGAVN 136 (299)
T ss_dssp TTCCTTCCC
T ss_pred CCCCCCCcC
Confidence 555555443
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=8.5e-27 Score=169.90 Aligned_cols=151 Identities=27% Similarity=0.353 Sum_probs=133.7
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
...+.+...++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 95 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEI 95 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 44555666888888888877776666678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh
Q 027950 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA 176 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g 176 (216)
+++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||+++|+..+..+ +++++++.|
T Consensus 96 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~----~~~~L~~~G 169 (169)
T 2y1l_E 96 VEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED----LAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHTC-
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH----HHHHHHHcC
Confidence 99999999999999999999999999999999999999999998654 999999999888655 356665543
No 40
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=9.1e-26 Score=161.74 Aligned_cols=133 Identities=26% Similarity=0.291 Sum_probs=103.2
Q ss_pred chHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 027950 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 132 (216)
Q Consensus 53 ~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~ 132 (216)
..++|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4678888888888888888888887765 466788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH
Q 027950 133 EVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 133 ~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~ 190 (216)
+++++|+++|++++.. |.||||+|+..+..+ +++++++.|++++ ..+.||++.|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~t~l~~A 140 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQE----VVELLIKYGADVHTQSKFCKTAFDIS 140 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCccccCCCCCCHHHHH
Confidence 8888888888887654 888888888776544 4677778887775 3455666555
No 41
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=4.1e-26 Score=160.53 Aligned_cols=126 Identities=29% Similarity=0.364 Sum_probs=112.3
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 027950 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (216)
Q Consensus 47 ~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a 126 (216)
......+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++..|..|.||||+|
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh
Q 027950 127 KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA 176 (216)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g 176 (216)
+..|+.+++++|+++|++++.. |.|||++|+..+..+ +++++++.|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~----~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNED----LAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHH----HHHHHHHcC
Confidence 9999999999999999998654 999999999888655 356666543
No 42
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=8.9e-27 Score=182.28 Aligned_cols=160 Identities=25% Similarity=0.240 Sum_probs=129.8
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
++..+...+..+.++.++..+......+..|.||+++|+..++.++++.|++.|++++.+|..|.||||+|+..|+.+++
T Consensus 89 pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 89 PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 34445567788888887777777777788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
++|++.|++++..+..|+||||+|+..|+.+++++|+++|+++|.. |+||||+|+..+. ..++++.+...++..
T Consensus 169 ~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~---i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 169 ALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK---IMELLQVVPSCVASL 245 (269)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH---HHHHTTC--------
T ss_pred HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc---HHHHHHHHHHhchhh
Confidence 9999999999999999999999999999999999999999999765 9999999987653 233455555556555
Q ss_pred CCCCCc
Q 027950 180 TKAWPV 185 (216)
Q Consensus 180 ~~~~~~ 185 (216)
+..+.|
T Consensus 246 ~~~~~t 251 (269)
T 4b93_B 246 DDVAET 251 (269)
T ss_dssp ------
T ss_pred hhccCC
Confidence 543333
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=2e-26 Score=175.06 Aligned_cols=165 Identities=16% Similarity=0.105 Sum_probs=141.6
Q ss_pred ccccccccCCCCcccccCCCCC--CCCCC-CCccchHHHHHHHHcCCHHHHHHHHhCC--CCCCccCCCCchHHHHHHHc
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQD--ELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEG--IDVNSIDLDGRTALHIAACE 96 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~t~L~~a~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~a~~~ 96 (216)
.++......+..+.++.++..+ ..... .+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+..
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~ 117 (228)
T 2dzn_A 38 IPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGK 117 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHc
Confidence 4445555577777777766655 22222 5678999999999999999999999998 88889999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC---CCCchhcccCCCCcccccchhhHH
Q 027950 97 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG-AKVPKT---KRTPMTVANPREVPEYELNPLELQ 172 (216)
Q Consensus 97 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g-~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l 172 (216)
++.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++| ++++.. |.||||+|+..+..+ +++++
T Consensus 118 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~----~v~~L 193 (228)
T 2dzn_A 118 KWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD----AAVLL 193 (228)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH----HHHHH
T ss_pred CCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH----HHHHH
Confidence 9999999999999999999999999999999999999999999999 888654 999999999988655 47888
Q ss_pred H-HhhcCCC---CCCCcchHHH
Q 027950 173 V-RKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 173 ~-~~g~~~~---~~~~~~l~~~ 190 (216)
+ ..|++++ ..+.||++.|
T Consensus 194 l~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 194 VEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHhcCCCCCccCCCCCcHHHHH
Confidence 8 8899986 5677888777
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=6.5e-26 Score=172.91 Aligned_cols=148 Identities=26% Similarity=0.252 Sum_probs=133.0
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCC-----CCCCCCCCCHHHH
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANI-----DARDRWGSTAAAD 125 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~-----~~~~~~g~t~L~~ 125 (216)
.|.||||+|+..|+.++++.|++. |++++.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 478999999999999999999997 9999999999999999999999999999999999887 6778899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCC----------------CCCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcc
Q 027950 126 AKYYGNVEVYNILKARGAKVPK----------------TKRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVP 186 (216)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~~----------------~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~ 186 (216)
|+..|+.+++++|+++|++++. .|.||||+|+..+..+ ++++|++.|++++ ..+.||
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE----IVRLLIEHGADIRAQDSLGNTV 157 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH----HHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCCCCCCCCH
Confidence 9999999999999999999865 4999999999887554 5888999999986 568899
Q ss_pred hHHH------HHH----HHHHHcCCCC
Q 027950 187 LIFV------HYV----ILLRQAGSFN 203 (216)
Q Consensus 187 l~~~------~~~----~~l~~~g~~~ 203 (216)
++.| .++ ++|++.|+..
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 9988 344 8899998853
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-25 Score=177.22 Aligned_cols=155 Identities=27% Similarity=0.335 Sum_probs=131.3
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
..+..+.|+||.||..|+.++++.|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCccc----------------------------------------
Q 027950 128 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY---------------------------------------- 164 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~---------------------------------------- 164 (216)
..|+.+++++|+++|++++.. |.||||+|+..+..++
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 999999999999999998643 6677666654322111
Q ss_pred ----------------ccchhhHHHHhhcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 165 ----------------ELNPLELQVRKADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 165 ----------------~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
...++++|+..|++++ ..+.||++.| .++++|++.|+.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad 257 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD 257 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Confidence 1235677888888875 5677888887 678888888875
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=1e-25 Score=172.24 Aligned_cols=165 Identities=25% Similarity=0.316 Sum_probs=146.7
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCC-CCCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEG-IDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
.++......+..+.++.+...+......+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+
T Consensus 46 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 3445555678888888887777777777888999999999999999999999998 789999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKAD 177 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~ 177 (216)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ +++++++.|+
T Consensus 126 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ga 201 (237)
T 3b7b_A 126 LVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYD----CVVLFLSRDS 201 (237)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH----HHHHHHTTTC
T ss_pred HHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHh----HHHHHHHcCC
Confidence 999999999999999999999999999999999999999999998765 999999999888554 5788999999
Q ss_pred CCC---CCCCcchHHH
Q 027950 178 GIT---KAWPVPLIFV 190 (216)
Q Consensus 178 ~~~---~~~~~~l~~~ 190 (216)
+++ ..+.||++.|
T Consensus 202 d~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 202 DVTLKNKEGETPLQCA 217 (237)
T ss_dssp CTTCCCTTSCCHHHHS
T ss_pred CCCccCCCCCCHHHHH
Confidence 986 5677888776
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=2.6e-27 Score=186.74 Aligned_cols=175 Identities=16% Similarity=0.104 Sum_probs=139.1
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
.+++.+...+..+.++.++..+...... +|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~ 110 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQT 110 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 3445555577777777766554433222 48899999999999999999999999888888889999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCchhcccCCCCcccccchhhHHHHhhcC
Q 027950 102 VKLLLSKKANIDARDRWG-STAAADAKYYGNVEVYNILKARGAKVPK--TKRTPMTVANPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g-~t~L~~a~~~g~~~~~~~Ll~~g~~~~~--~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
+++|++.|++++..+..| .||||+|+..|+.+++++|+++|++... .|.||||+|+..+..+ ++++|++.|++
T Consensus 111 v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~gad 186 (285)
T 3kea_A 111 VKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVD----MMILLLDYMTS 186 (285)
T ss_dssp HHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHH----HHHHHHHHHHH
T ss_pred HHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHH----HHHHHHHcCCC
Confidence 999999999998888888 7999999999999999999998888733 4889999998877554 47888888888
Q ss_pred CC---CCCCcc-hHHH------HHHHHHHHcCCC
Q 027950 179 IT---KAWPVP-LIFV------HYVILLRQAGSF 202 (216)
Q Consensus 179 ~~---~~~~~~-l~~~------~~~~~l~~~g~~ 202 (216)
++ ..+.|| ++.| .++++|++.|+.
T Consensus 187 ~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 187 TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 76 446676 8877 578888888875
No 48
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=2.2e-26 Score=170.93 Aligned_cols=152 Identities=20% Similarity=0.213 Sum_probs=134.5
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
..+++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE 115 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 34555556678888888777776666667788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA 176 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g 176 (216)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||+++|+..+..+ +++++++.|
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~----~v~~Ll~~~ 190 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE----VIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH----HHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH----HHHHHHhcc
Confidence 999999999999999999999999999999999999999999998654 999999999888655 466666655
No 49
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=2.4e-26 Score=179.76 Aligned_cols=167 Identities=17% Similarity=0.096 Sum_probs=139.0
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCC-----------------------
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGID----------------------- 78 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~----------------------- 78 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|++++++
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (282)
T 1oy3_D 47 TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA 126 (282)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcc
Confidence 445555667888888888777777777788899999999999999999999988754
Q ss_pred ------------------------CCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCCHHHHHHHcCCHH
Q 027950 79 ------------------------VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-GSTAAADAKYYGNVE 133 (216)
Q Consensus 79 ------------------------~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~a~~~g~~~ 133 (216)
++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred hhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 6677889999999999999999999999999999999864 999999999999999
Q ss_pred HHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCCCCcchHHHHH
Q 027950 134 VYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKAWPVPLIFVHY 192 (216)
Q Consensus 134 ~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~~~ 192 (216)
++++|+++|++++.. |.||||+|+..+..+ ++++|++.|++++..+..+.++.++
T Consensus 207 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 207 VLELLLKAGADPTARMYGGRTPLGSALLRPNPI----LARLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHH----HHHHHHHTTCCCCCCC---------
T ss_pred HHHHHHHcCCCCcccccCCCCHHHHHHHcCCcH----HHHHHHHcCCCcCcCCCcccccccc
Confidence 999999999999765 999999999988655 5889999999998544444444433
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=2.7e-26 Score=166.66 Aligned_cols=153 Identities=19% Similarity=0.198 Sum_probs=134.7
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
+++.+...++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 6 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 85 (167)
T 3v31_A 6 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIV 85 (167)
T ss_dssp CHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 44555667788888777776666666788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||+++|+..+..++ ++++++++.+.
T Consensus 86 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~----~~~L~~~~~~~ 161 (167)
T 3v31_A 86 KMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV----QQVIESHLLKL 161 (167)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH----HHHHHHHHHHH
T ss_pred HHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH----HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998655 9999999998886654 66666665543
No 51
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.1e-26 Score=176.28 Aligned_cols=165 Identities=20% Similarity=0.202 Sum_probs=145.6
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCC----CCCccCCCCchHHHHHHHcC
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI----DVNSIDLDGRTALHIAACEG 97 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~L~~a~~~~ 97 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..+
T Consensus 48 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 127 (241)
T 1k1a_A 48 TPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC
Confidence 44455556778888888777777666778889999999999999999999999886 78888999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHH
Q 027950 98 HVEVVKLLLSKKANIDARD-RWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQV 173 (216)
Q Consensus 98 ~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~ 173 (216)
+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++|+
T Consensus 128 ~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll 203 (241)
T 1k1a_A 128 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP----LVRTLV 203 (241)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH----HHHHHH
T ss_pred CHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHH
Confidence 9999999999999999998 78999999999999999999999999999764 999999999887654 588999
Q ss_pred HhhcCCC---CCCCcchHHH
Q 027950 174 RKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 174 ~~g~~~~---~~~~~~l~~~ 190 (216)
+.|++++ ..+.||++.|
T Consensus 204 ~~ga~~~~~~~~g~tpl~~A 223 (241)
T 1k1a_A 204 RSGADSSLKNCHNDTPLMVA 223 (241)
T ss_dssp HTTCCTTCCCTTSCCTTTTC
T ss_pred hcCCCCCCcCCCCCCHHHHH
Confidence 9999986 5678888877
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.6e-25 Score=180.01 Aligned_cols=178 Identities=24% Similarity=0.162 Sum_probs=150.0
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEV 139 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 44555566788888888877777777778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC------------------------------------------------------CCCCCHHHHHH
Q 027950 102 VKLLLSKKANIDARD------------------------------------------------------RWGSTAAADAK 127 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~------------------------------------------------------~~g~t~L~~a~ 127 (216)
+++|+++|++++..+ ..|.||||+|+
T Consensus 140 v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~ 219 (351)
T 3utm_A 140 CSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAV 219 (351)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHH
T ss_pred HHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHH
Confidence 999999999887654 45678888888
Q ss_pred Hc---CCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH------HH
Q 027950 128 YY---GNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV------HY 192 (216)
Q Consensus 128 ~~---g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~------~~ 192 (216)
.. +..+++++|+++|+++|.. |.||||+|+..+..+ ++++|++.|++++ ..+.||++.| .+
T Consensus 220 ~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~ 295 (351)
T 3utm_A 220 ASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHND----VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQT 295 (351)
T ss_dssp HCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 88 4578899999999998654 889999998887554 5788888898886 5568888888 67
Q ss_pred HHHHHHcCCCC
Q 027950 193 VILLRQAGSFN 203 (216)
Q Consensus 193 ~~~l~~~g~~~ 203 (216)
+++|++.|+..
T Consensus 296 v~~Ll~~gad~ 306 (351)
T 3utm_A 296 CRLLLSYGSDP 306 (351)
T ss_dssp HHHHHHTTCCT
T ss_pred HHHHHHcCCCC
Confidence 88888888753
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.2e-25 Score=174.15 Aligned_cols=180 Identities=27% Similarity=0.247 Sum_probs=138.4
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
++......+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 42 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 121 (285)
T 1wdy_A 42 PLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH
Confidence 34444556777777777666666666677788888888888888888888888888888888888888888888888888
Q ss_pred HHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC---CCCchhcccCCCCcccccch
Q 027950 103 KLLLSKKANIDAR----------DRWGSTAAADAKYYGNVEVYNILKAR-GAKVPKT---KRTPMTVANPREVPEYELNP 168 (216)
Q Consensus 103 ~~Ll~~g~~~~~~----------~~~g~t~L~~a~~~g~~~~~~~Ll~~-g~~~~~~---g~t~l~~a~~~~~~~~~~~~ 168 (216)
++|++.|++++.. +..|.||||+|+..|+.+++++|+++ |++++.. |.||||+|+..+.......+
T Consensus 122 ~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i 201 (285)
T 1wdy_A 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201 (285)
T ss_dssp HHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHH
T ss_pred HHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHH
Confidence 8888888888776 66788888888888888888888876 8887654 88888888776654444556
Q ss_pred hhHHHHhhcCCC---CCCCcchHHH------HHHHHHHH-cCCC
Q 027950 169 LELQVRKADGIT---KAWPVPLIFV------HYVILLRQ-AGSF 202 (216)
Q Consensus 169 ~~~l~~~g~~~~---~~~~~~l~~~------~~~~~l~~-~g~~ 202 (216)
+++++..|++++ ..+.||++.| .++++|++ .|+.
T Consensus 202 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245 (285)
T ss_dssp HHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC
Confidence 778888888775 4577888877 56777777 5553
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=2.8e-26 Score=164.46 Aligned_cols=138 Identities=26% Similarity=0.287 Sum_probs=121.0
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHH
Q 027950 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (216)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~L 105 (216)
.....++.+.++.++..+.. ...+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|
T Consensus 8 ~A~~~g~~~~v~~Ll~~g~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 86 (153)
T 1awc_B 8 EAARAGQDDEVRILMANGAP-FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVL 86 (153)
T ss_dssp HHHHHTCHHHHHHHHHHTCC-CCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHH
Confidence 34445666666655544433 34577899999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCccc
Q 027950 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 164 (216)
Q Consensus 106 l~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~ 164 (216)
++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |.||+++|+..+..++
T Consensus 87 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 87 LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999765 9999999998876553
No 55
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.5e-25 Score=184.69 Aligned_cols=175 Identities=27% Similarity=0.274 Sum_probs=131.3
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHH
Q 027950 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (216)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ 104 (216)
......+..+.++.++..+......+..|.||||+|+..|+.++++.|++.|++++..+..|.||||+|+..|+.+++++
T Consensus 184 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 263 (437)
T 1n11_A 184 HVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 263 (437)
T ss_dssp HHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 33344556666666666665555556677788888888888888888888888887777778888888888888888888
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC-
Q 027950 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT- 180 (216)
Q Consensus 105 Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~- 180 (216)
|++.|++++..+..|.||||+|+..|+.+++++|+++|+++|.. |.||||+|+..+..+ ++++|++.|++++
T Consensus 264 Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 264 LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK----LVKFLLQHQADVNA 339 (437)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH----HHHHHHHTTCCTTC
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH----HHHHHHhcCCCCCC
Confidence 88888888888888888888888888888888888888877654 888888888776544 4677778887775
Q ss_pred --CCCCcchHHH------HHHHHHHHcCCCC
Q 027950 181 --KAWPVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 181 --~~~~~~l~~~------~~~~~l~~~g~~~ 203 (216)
..+.||++.| .++++|++.|+..
T Consensus 340 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 340 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 4567788777 5777888877753
No 56
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.7e-25 Score=169.90 Aligned_cols=133 Identities=20% Similarity=0.223 Sum_probs=120.9
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 44667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCC----CCCCchhcc--cCCCCcccccchhhHHHHhhcCCCCCCC
Q 027950 128 YYGNVEVYNILKARGAKVPK----TKRTPMTVA--NPREVPEYELNPLELQVRKADGITKAWP 184 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~----~g~t~l~~a--~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 184 (216)
..|+.+++++|+++|++++. .|.||||+| +..+..+ ++++|++.|++++..+.
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~----~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYAD----CATYLADVEQSMGLMNS 154 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHH----HHHHHHHHHHHTTTSGG
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHH----HHHHHHHcCCCcccccC
Confidence 99999999999999999864 499999999 7766444 58889999988875443
No 57
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.4e-25 Score=157.87 Aligned_cols=117 Identities=29% Similarity=0.380 Sum_probs=109.8
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~ 127 (216)
..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCccc
Q 027950 128 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 164 (216)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~ 164 (216)
..|+.+++++|+++|++++.. |.||+++|+..+..++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~ 124 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHH
Confidence 999999999999999998655 9999999998765543
No 58
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=3.6e-25 Score=168.93 Aligned_cols=185 Identities=19% Similarity=0.170 Sum_probs=151.8
Q ss_pred CCccccccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCchHHHHHH
Q 027950 16 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAA 94 (216)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~a~ 94 (216)
.++.....++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++... ..|.||||+|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 34444555666677888888888777776666667889999999999999999999999998877654 45899999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhH
Q 027950 95 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLEL 171 (216)
Q Consensus 95 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~ 171 (216)
..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+..+.. ...+++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~---~~~~~~ 161 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS---VDPTRL 161 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCS---STTHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCh---HHHHHH
Confidence 999999999999999999999999999999999999999999999999998654 89999999854431 235678
Q ss_pred HHHhhcCCCC----CCCcchHHH------HHHHHHHHcCCCC
Q 027950 172 QVRKADGITK----AWPVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 172 l~~~g~~~~~----~~~~~l~~~------~~~~~l~~~g~~~ 203 (216)
+...|++++. .+.||++.| .++++|++.|+..
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 8888888873 556888888 6788888888753
No 59
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.8e-26 Score=166.09 Aligned_cols=135 Identities=23% Similarity=0.243 Sum_probs=113.6
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC-HHHHH
Q 027950 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGST-AAADA 126 (216)
Q Consensus 48 ~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~a 126 (216)
..+..+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|++.|++++.++..|+| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 34566899999999999999999999999999999999999999985 89999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCCCCcch
Q 027950 127 KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKAWPVPL 187 (216)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l 187 (216)
+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++|++.|++++..+..+.
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD----VARYLRAAAGGTRGSNHARI 145 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH----HHHHHSSCC-----------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH----HHHHHHHcCCCCCccCcCcC
Confidence 9999999999999999999765 999999999887554 58889999999875544443
No 60
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.9e-25 Score=154.40 Aligned_cols=112 Identities=29% Similarity=0.412 Sum_probs=103.8
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
+..+.||||+|+..|+.++++.|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCC---CCCchhcccCCCC
Q 027950 130 GNVEVYNILKARGAKVPKT---KRTPMTVANPREV 161 (216)
Q Consensus 130 g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~ 161 (216)
|+.+++++|+++|++++.. |.||+++|...+.
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 9999999999999998655 9999999966543
No 61
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=2e-25 Score=182.25 Aligned_cols=178 Identities=20% Similarity=0.199 Sum_probs=151.2
Q ss_pred ccccccccCCCCcccccCC--------CCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSP--------VQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIA 93 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a 93 (216)
.++..+...+..+.++.++ ..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A 206 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA 206 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Confidence 3344445566676666554 34555555678899999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCC-----------CCCCchhcc
Q 027950 94 ACEGHVEVVKLLLSKK---ANIDARDRWGSTAAADAKYYG---NVEVYNILKARGAKVPK-----------TKRTPMTVA 156 (216)
Q Consensus 94 ~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~a~~~g---~~~~~~~Ll~~g~~~~~-----------~g~t~l~~a 156 (216)
+..|+.+++++|++.+ ++++..+..|.||||+|+..+ +.+++++|+++|++++. .|.||||+|
T Consensus 207 ~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A 286 (373)
T 2fo1_E 207 AANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA 286 (373)
T ss_dssp HHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHH
T ss_pred HHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHH
Confidence 9999999999999998 899999999999999999998 89999999999999875 499999999
Q ss_pred cCCCCcccccchhhHHHHhh-cCCC---CCCCcchHHH------HHHHHHHHcCCCC
Q 027950 157 NPREVPEYELNPLELQVRKA-DGIT---KAWPVPLIFV------HYVILLRQAGSFN 203 (216)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~g-~~~~---~~~~~~l~~~------~~~~~l~~~g~~~ 203 (216)
+..+..+ ++++|+..+ ++++ ..+.||++.| .++++|++.|+..
T Consensus 287 ~~~g~~~----~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 287 AQVSNMP----IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp HSSCCHH----HHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHhCCHH----HHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9988655 578888776 7765 5688999998 6889999998863
No 62
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.6e-25 Score=153.61 Aligned_cols=123 Identities=37% Similarity=0.503 Sum_probs=114.6
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcC
Q 027950 132 VEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
.+++++|+++|++++.. |.||+++|+..+..+ +++++++.|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~----~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE----VVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHH----HHHHHHHcCCC
Confidence 99999999999998654 999999999887554 57888888874
No 63
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=1.1e-26 Score=183.07 Aligned_cols=150 Identities=18% Similarity=0.123 Sum_probs=135.0
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 027950 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (216)
Q Consensus 47 ~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a 126 (216)
...+..|.||||+|+..|+.+++++|+++|++++.. .|.||||+|+..|+.+++++|++.|++++..+..|+||||+|
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 455778999999999999999999999999999887 489999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCC---C-CCchhcccCCCCcccccchhhHHHHhhcCCCC--CCCcchHHH------HHHH
Q 027950 127 KYYGNVEVYNILKARGAKVPKT---K-RTPMTVANPREVPEYELNPLELQVRKADGITK--AWPVPLIFV------HYVI 194 (216)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~~~---g-~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~~l~~~------~~~~ 194 (216)
+..|+.+++++|+++|++++.. | .||||+|+..+..+ ++++++..|++... .+.||++.| .+++
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~ 178 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVS----IVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMI 178 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHH----HHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHH----HHHHHHhCCCccccccCCccHHHHHHHcChHHHHH
Confidence 9999999999999999998765 6 79999999988654 58889999988743 678999988 6888
Q ss_pred HHHHcCCC
Q 027950 195 LLRQAGSF 202 (216)
Q Consensus 195 ~l~~~g~~ 202 (216)
+|++.|+.
T Consensus 179 ~Ll~~gad 186 (285)
T 3kea_A 179 LLLDYMTS 186 (285)
T ss_dssp HHHHHHHH
T ss_pred HHHHcCCC
Confidence 88888764
No 64
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=2e-25 Score=175.21 Aligned_cols=150 Identities=19% Similarity=0.185 Sum_probs=133.5
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCchHHHHHH-----HcCCHHHHHHHHhCCCCCCCCCCCCC
Q 027950 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAA-----CEGHVEVVKLLLSKKANIDARDRWGS 120 (216)
Q Consensus 47 ~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~a~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~ 120 (216)
...+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|.+++..+..|+
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQ 184 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCC
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCC
Confidence 3457789999999999999999999999998 99999999999999999 66889999999999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHH-hhcCCC---CCCCcchHHH---
Q 027950 121 TAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVR-KADGIT---KAWPVPLIFV--- 190 (216)
Q Consensus 121 t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~-~g~~~~---~~~~~~l~~~--- 190 (216)
||||+|+..|+.+++++|+++|+++|.. |.||||+|+..+..+ ++++|+. .|++++ ..+.||++.|
T Consensus 185 tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~----iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 185 TALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKE----IAGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH----HHHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH----HHHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999999765 999999999988654 5788888 898876 6678888888
Q ss_pred ---HHHHHHHHcC
Q 027950 191 ---HYVILLRQAG 200 (216)
Q Consensus 191 ---~~~~~l~~~g 200 (216)
.++++|++.+
T Consensus 261 g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 261 GQSEIASMLYSRM 273 (276)
T ss_dssp TCHHHHHHHHHHC
T ss_pred CCHHHHHHHHhcc
Confidence 5677777654
No 65
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=5.2e-25 Score=168.51 Aligned_cols=154 Identities=18% Similarity=0.130 Sum_probs=136.3
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCC------CCccCCCCchHHHHHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGID------VNSIDLDGRTALHIAAC 95 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~a~~ 95 (216)
.++......+..+.++.++..+......+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+.
T Consensus 47 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 126 (236)
T 1ikn_D 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 126 (236)
T ss_dssp CHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHH
Confidence 444555567888888888888777777788999999999999999999999999875 46677889999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhH
Q 027950 96 EGHVEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLEL 171 (216)
Q Consensus 96 ~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~ 171 (216)
.|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.. |.|||++|+..+..+ ++++
T Consensus 127 ~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~----~~~~ 202 (236)
T 1ikn_D 127 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR----IQQQ 202 (236)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH----HHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH----HHHH
Confidence 9999999999999999999997 9999999999999999999999999998765 999999999988655 5788
Q ss_pred HHHhhcCC
Q 027950 172 QVRKADGI 179 (216)
Q Consensus 172 l~~~g~~~ 179 (216)
|++.|++.
T Consensus 203 Ll~~ga~~ 210 (236)
T 1ikn_D 203 LGQLTLEN 210 (236)
T ss_dssp HHTTSCGG
T ss_pred HHHcchhh
Confidence 99999855
No 66
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=3.2e-25 Score=170.35 Aligned_cols=152 Identities=24% Similarity=0.163 Sum_probs=115.0
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHH
Q 027950 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (216)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ 104 (216)
....+.+..+.++.++..+.. +..+..+.||||+|+..|+.++++.|++.|++++..+..|.||||+|+..|+.+++++
T Consensus 10 ~~a~~~~~~~~~~~ll~~g~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 88 (239)
T 1ycs_B 10 PPGKRTNLRKTGSERIAHGMR-VKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF 88 (239)
T ss_dssp ----------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred chhhhhhhHHHHHHHhccCCC-cccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 344445666666665555433 3456788999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CC-Cchhcc--cCCCCcccccchhhHHHHhhcC
Q 027950 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KR-TPMTVA--NPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 105 Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~-t~l~~a--~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |. ||+|+| +..+..+ ++++|+..|++
T Consensus 89 Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~----~~~~Ll~~~a~ 164 (239)
T 1ycs_B 89 LVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ----CSQFLYGVQEK 164 (239)
T ss_dssp HHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCC----HHHHHHHHHHH
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHH----HHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999765 44 999999 5555444 57888888888
Q ss_pred CCC
Q 027950 179 ITK 181 (216)
Q Consensus 179 ~~~ 181 (216)
++.
T Consensus 165 ~~~ 167 (239)
T 1ycs_B 165 MGI 167 (239)
T ss_dssp TTT
T ss_pred ccc
Confidence 764
No 67
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-25 Score=185.95 Aligned_cols=176 Identities=26% Similarity=0.198 Sum_probs=114.5
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
++......|+.+.++.++..+......+..+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 17 ~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v 96 (437)
T 1n11_A 17 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMV 96 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 33444456666666666655555555566677777777777777777777777777777777777777777777777777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPK---TKRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~---~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
++|++.|++++..+..|.||||+|+..|+.+++++|++++++++. .|.||||+|+..+..+ +++++++.|+++
T Consensus 97 ~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~ 172 (437)
T 1n11_A 97 KLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR----VAELLLERDAHP 172 (437)
T ss_dssp HHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCT
T ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH----HHHHHHhCCCCC
Confidence 777777777777777777777777777777777777777666543 2667777666665433 355666666655
Q ss_pred C---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 180 T---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 180 ~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
+ ..+.||++.| .++++|++.|..
T Consensus 173 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 204 (437)
T 1n11_A 173 NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204 (437)
T ss_dssp TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 4 3445566555 455555555543
No 68
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=6.1e-25 Score=171.64 Aligned_cols=177 Identities=23% Similarity=0.239 Sum_probs=154.4
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCcc----------CCCCchHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSI----------DLDGRTALH 91 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~----------~~~g~t~L~ 91 (216)
.++......++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~ 153 (285)
T 1wdy_A 74 TPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 153 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHH
Confidence 3344445577778777777777666677888999999999999999999999999998876 678999999
Q ss_pred HHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcc
Q 027950 92 IAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGN----VEVYNILKARGAKVPKT---KRTPMTVANPREVPE 163 (216)
Q Consensus 92 ~a~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~a~~~g~----~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~ 163 (216)
+|+..|+.+++++|++. |++++..+..|.||||+|+..++ .+++++|+++|++++.. |.||||+|+..+..+
T Consensus 154 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp HHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 99999999999999987 99999999999999999999999 89999999999998765 999999999988655
Q ss_pred cccchhhHHHH-hhcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 164 YELNPLELQVR-KADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 164 ~~~~~~~~l~~-~g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
+++++++ .|++++ ..+.||++.| .++++|++.|+.
T Consensus 234 ----~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 234 ----LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp ----HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred ----HHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 4778887 788775 6788999998 689999999986
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=9.5e-25 Score=156.68 Aligned_cols=132 Identities=22% Similarity=0.285 Sum_probs=97.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 53 STMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 53 ~~t~L~~a~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
+.++||+|+..|+.++++.|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46778888888888888888876 33677777778888888 77788888888888888888888788888888888888
Q ss_pred HHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH
Q 027950 132 VEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 132 ~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~ 190 (216)
.+++++|+++|++++.. |.||||+|+..+..+ ++++++.. ++++ ..+.||++.|
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~-~~~~~~~~~g~t~l~~A 140 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA----VVSFLAAE-SDLHRRDARGLTPLELA 140 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH----HHHHHHTT-SCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHH----HHHHHHhc-cCCCCcCCCCCCHHHHH
Confidence 88888888888777554 778888887766544 35666665 5554 4566666666
No 70
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=5.2e-25 Score=178.78 Aligned_cols=175 Identities=19% Similarity=0.153 Sum_probs=131.0
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
..++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..|+.++
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~ 99 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDL 99 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHH
Confidence 334444556666666666666555555566677777777777777777777777765433 356777777777777777
Q ss_pred HHHHHhC----CCCCCC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCC---CCCchhc
Q 027950 102 VKLLLSK----KANIDA-----------------RDRWGSTAAADAKYYG--NVEVYNILKARGAKVPKT---KRTPMTV 155 (216)
Q Consensus 102 ~~~Ll~~----g~~~~~-----------------~~~~g~t~L~~a~~~g--~~~~~~~Ll~~g~~~~~~---g~t~l~~ 155 (216)
+++|++. |++++. .+..|.||||+|+..| +.+++++|+++|++++.. |.||||+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 179 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 7777776 666555 7778999999999999 899999999999998765 8999999
Q ss_pred ccCCCCcccccchhhHHHHhhcC-----CC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 156 ANPREVPEYELNPLELQVRKADG-----IT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 156 a~~~~~~~~~~~~~~~l~~~g~~-----~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
|+..+..+ ++++|+..|++ ++ ..+.||+|.| .++++|++.|+.
T Consensus 180 A~~~g~~~----~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad 236 (364)
T 3ljn_A 180 AMEFRNRE----ALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID 236 (364)
T ss_dssp HHHTTCHH----HHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC
T ss_pred HHHcCCHH----HHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99887654 57888888887 54 5788999988 688899988875
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.6e-25 Score=160.71 Aligned_cols=139 Identities=21% Similarity=0.243 Sum_probs=120.5
Q ss_pred ccccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 24 RFSFGRQSSLDPIRRSPVQD-ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
++.....++.+.++.++... ......+..|.||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 84 (156)
T 1bd8_A 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTL 84 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 33444566666666665552 2344557779999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCccc
Q 027950 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 164 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~ 164 (216)
++|++.|++++.+|..|+||||+|+..|+.+++++|+++ ++++.. |.|||++|+..+..++
T Consensus 85 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 85 KVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred HHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 999999999999999999999999999999999999999 888654 9999999998886654
No 72
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=7.1e-24 Score=158.09 Aligned_cols=149 Identities=21% Similarity=0.272 Sum_probs=132.4
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 51 LDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 51 ~~~~t~L~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
..+.||||.|+..|+.+.++.|+..+. +++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 457899999999999999999998875 8999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-HCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh-cCCC---CCCCcchHHH-----------
Q 027950 130 GNVEVYNILK-ARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA-DGIT---KAWPVPLIFV----------- 190 (216)
Q Consensus 130 g~~~~~~~Ll-~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g-~~~~---~~~~~~l~~~----------- 190 (216)
|+.+++++|+ ..+++++.. |.||||+|+..+..+ +++++++.| ++++ ..+.||++.|
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID----NVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH----HHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH----HHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 9999999999 667677654 999999999988654 588888888 6665 5688999887
Q ss_pred HHHHHHHHcCCCC
Q 027950 191 HYVILLRQAGSFN 203 (216)
Q Consensus 191 ~~~~~l~~~g~~~ 203 (216)
.++++|++.|+..
T Consensus 159 ~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 159 DIVKLLMENGADQ 171 (201)
T ss_dssp HHHHHHHHTTCCT
T ss_pred HHHHHHHHCCCCC
Confidence 3788999998763
No 73
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=7.7e-25 Score=178.73 Aligned_cols=172 Identities=16% Similarity=0.190 Sum_probs=142.5
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHH--------hCCCCCCccCCCCchHHHHHHHcCC
Q 027950 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLL--------NEGIDVNSIDLDGRTALHIAACEGH 98 (216)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll--------~~~~~~~~~~~~g~t~L~~a~~~~~ 98 (216)
++..++.+.+..+ ....++...+..|.||||+|+..|+.+++++|+ +.|+++|..|..|.||||+|+..|+
T Consensus 100 ~Aa~~~~~~~~~L-~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~ 178 (373)
T 2fo1_E 100 TEAAGSYAITEPI-TRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR 178 (373)
T ss_dssp HHHHSSSCCCSCC-STTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHhcCCchHHHHh-ccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcCh
Confidence 3333444544444 344455444578999999999999988777765 8899999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCC---CCCCchhcccCCCCcccccchhhHH
Q 027950 99 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG---AKVPK---TKRTPMTVANPREVPEYELNPLELQ 172 (216)
Q Consensus 99 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g---~~~~~---~g~t~l~~a~~~~~~~~~~~~~~~l 172 (216)
.+++++|++.|++++..+..|.||||+|+..|+.+++++|++++ ++++. .|.||||+|+..+... ...+++++
T Consensus 179 ~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~-~~~~v~~L 257 (373)
T 2fo1_E 179 RRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRD-QVASAKLL 257 (373)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTT-HHHHHHHH
T ss_pred HHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcc-hHHHHHHH
Confidence 99999999999999999999999999999999999999999988 67754 4999999998765221 23468899
Q ss_pred HHhhcCCCC-----------CCCcchHHH------HHHHHHHHcC
Q 027950 173 VRKADGITK-----------AWPVPLIFV------HYVILLRQAG 200 (216)
Q Consensus 173 ~~~g~~~~~-----------~~~~~l~~~------~~~~~l~~~g 200 (216)
+..|++++. .+.||++.| .++++|++.+
T Consensus 258 l~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 302 (373)
T 2fo1_E 258 VEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 302 (373)
T ss_dssp HHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS
T ss_pred HHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc
Confidence 999999864 688999998 6888898776
No 74
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=1.3e-24 Score=165.75 Aligned_cols=177 Identities=19% Similarity=0.189 Sum_probs=150.9
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCC-ccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPEN-LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
.++......+..+.++.++..+....... ..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS 123 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH
Confidence 34455556778888887776665554443 44899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCC----CCCchhcccCCCCcccccchhhHHHHh
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGN-VEVYNILKARGAKVPKT----KRTPMTVANPREVPEYELNPLELQVRK 175 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~-~~~~~~Ll~~g~~~~~~----g~t~l~~a~~~~~~~~~~~~~~~l~~~ 175 (216)
++++|++.|++++..+..|.||||+|+..++ .+++++|++.|++++.. |.||||+|+..+..+ +++++++.
T Consensus 124 ~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~ 199 (240)
T 3eu9_A 124 IVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT----VISLLLEA 199 (240)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH----HHHHHHHH
T ss_pred HHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH----HHHHHHHc
Confidence 9999999999999999999999999997776 89999999999999754 889999999888554 58899999
Q ss_pred hcCCC---CCCCcchHHH------HHHHHHHHcCCC
Q 027950 176 ADGIT---KAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 176 g~~~~---~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
|++++ ..+.||++.| .++++|++.+..
T Consensus 200 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 200 GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 99986 5678899888 688888887764
No 75
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=7.6e-25 Score=161.65 Aligned_cols=110 Identities=31% Similarity=0.312 Sum_probs=103.9
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHH
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 128 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~a~~ 128 (216)
+..|.||||+|+..|+.++++.|++ |++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCchhcccCCC
Q 027950 129 YGNVEVYNILKARGAKVPKT---KRTPMTVANPRE 160 (216)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~ 160 (216)
.|+.+++++|+++|++++.. |.||||+|+..+
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 99999999999999998755 999999998643
No 76
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.9e-24 Score=140.16 Aligned_cols=93 Identities=42% Similarity=0.578 Sum_probs=89.3
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~ 131 (216)
+|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCC
Q 027950 132 VEVYNILKARGAK 144 (216)
Q Consensus 132 ~~~~~~Ll~~g~~ 144 (216)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=4.2e-25 Score=169.73 Aligned_cols=148 Identities=15% Similarity=0.103 Sum_probs=100.4
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
+..|.||||.|+..++.+.++.|+++|++++. +..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34689999999999999999999999999986 46789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCC----CCcchHHH--------HHHH
Q 027950 130 GNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKA----WPVPLIFV--------HYVI 194 (216)
Q Consensus 130 g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~l~~~--------~~~~ 194 (216)
|+.+++++|+++|+++|.. |.||||+|+..+..+ ++++|+..|++++.. ..||++.+ .+++
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ----VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 9999999999999999765 999999999888654 588999999998732 33888876 4677
Q ss_pred HHHHcCCC
Q 027950 195 LLRQAGSF 202 (216)
Q Consensus 195 ~l~~~g~~ 202 (216)
+|++.|+.
T Consensus 157 ~Ll~~~a~ 164 (239)
T 1ycs_B 157 FLYGVQEK 164 (239)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhc
Confidence 88877664
No 78
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=1.3e-24 Score=164.93 Aligned_cols=127 Identities=23% Similarity=0.337 Sum_probs=108.8
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHH
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKY 128 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~a~~ 128 (216)
+..|.||||+|+..|+.++++.|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC
Q 027950 129 YGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT 180 (216)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~ 180 (216)
.|+.+++++|+++|++++.. |.|||++|+..+..+ +++.+...++...
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~----~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACAS----LLKKKQGTDAVRT 200 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHH----HHC----------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHH----HHHHHhccchhhh
Confidence 99999999999999998765 999999999877554 4566666676664
No 79
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=1.9e-25 Score=173.28 Aligned_cols=149 Identities=19% Similarity=0.185 Sum_probs=127.1
Q ss_pred cCCCCcccccCCCCCC-----------CCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccC--------------
Q 027950 29 RQSSLDPIRRSPVQDE-----------LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-------------- 83 (216)
Q Consensus 29 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-------------- 83 (216)
..+..+.++.++..+. .....+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 4677777766655431 122334589999999999999999999999999999988
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCCCC-----
Q 027950 84 LDGRTALHIAACEGHVEVVKLLLS---KKANIDARDRWGSTAAADAKYYGN---------VEVYNILKARGAKVP----- 146 (216)
Q Consensus 84 ~~g~t~L~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~a~~~g~---------~~~~~~Ll~~g~~~~----- 146 (216)
..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 217 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence 689999999999999999999999 999999999999999999999887 799999999999873
Q ss_pred -----CCCCCchhcccCCCCcccccchhhHHHHhhcCCCC
Q 027950 147 -----KTKRTPMTVANPREVPEYELNPLELQVRKADGITK 181 (216)
Q Consensus 147 -----~~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~ 181 (216)
..|.||||+|+..+..+ ++++|+++|.....
T Consensus 218 ~~~~d~~g~tpL~~A~~~g~~~----~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 218 EALLNNDGLSPLMMAAKTGKIG----IFQHIIRREIADAA 253 (260)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHH----HHHHHHHHHHHHHC
T ss_pred hhcccCCCCCHHHHHHHcCCHH----HHHHHHHhCCCccc
Confidence 33999999999988655 57888888876543
No 80
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=2.9e-25 Score=171.90 Aligned_cols=145 Identities=22% Similarity=0.214 Sum_probs=124.3
Q ss_pred CCCcccccCCCCCCCCC-----------CCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCC-------------C
Q 027950 31 SSLDPIRRSPVQDELTV-----------PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD-------------G 86 (216)
Q Consensus 31 ~~~~~~~~~~~~~~~~~-----------~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~-------------g 86 (216)
+..+.++.++..+.... ..+..|.||||+|+..|+.+++++|+++|++++..+.. |
T Consensus 57 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 57 GVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp TBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSC
T ss_pred chHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCC
Confidence 77777766554433222 22367999999999999999999999999999998876 9
Q ss_pred chHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CC
Q 027950 87 RTALHIAACEGHVEVVKLLLS---KKANIDARDRWGSTAAADAKY--YGNVE-------VYNILKARGAKV-------PK 147 (216)
Q Consensus 87 ~t~L~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~a~~--~g~~~-------~~~~Ll~~g~~~-------~~ 147 (216)
.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 216 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI 216 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc
Confidence 999999999999999999999 999999999999999999999 78888 999999999988 44
Q ss_pred C---CCCchhcccCCCCcccccchhhHHHHhhcCC
Q 027950 148 T---KRTPMTVANPREVPEYELNPLELQVRKADGI 179 (216)
Q Consensus 148 ~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~ 179 (216)
. |.||||+|+..+..+ ++++|+++|...
T Consensus 217 ~d~~g~tpL~~A~~~g~~~----~v~~Ll~~g~~~ 247 (256)
T 2etb_A 217 SNHQGLTPLKLAAKEGKIE----IFRHILQREFSG 247 (256)
T ss_dssp CCTTSCCHHHHHHHTTCHH----HHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCCHH----HHHHHHhCCCCC
Confidence 3 999999999988655 477888887654
No 81
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=3.3e-25 Score=177.94 Aligned_cols=156 Identities=13% Similarity=0.011 Sum_probs=120.9
Q ss_pred ccCCCCCCCCCC-CCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCC---HHHHHHHHhCC-CC
Q 027950 37 RRSPVQDELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH---VEVVKLLLSKK-AN 111 (216)
Q Consensus 37 ~~~~~~~~~~~~-~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~Ll~~g-~~ 111 (216)
+.++..+..... .+..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+ .++++.|++.+ ++
T Consensus 114 ~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~ 193 (327)
T 1sw6_A 114 DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193 (327)
T ss_dssp HHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred HHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc
Confidence 334444443444 68889999999999999999999999999999999999999999999998 67888888875 78
Q ss_pred CCCCCCCCCCHHHHHHH----cCCHHHHHHHHHC--------------------CCCCCCC---CCCchhcccCCCCccc
Q 027950 112 IDARDRWGSTAAADAKY----YGNVEVYNILKAR--------------------GAKVPKT---KRTPMTVANPREVPEY 164 (216)
Q Consensus 112 ~~~~~~~g~t~L~~a~~----~g~~~~~~~Ll~~--------------------g~~~~~~---g~t~l~~a~~~~~~~~ 164 (216)
++..+..|+||||+|+. .|+.+++++|++. |++++.. |.||||.|+.
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------ 267 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------ 267 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------
Confidence 99999999999999999 8999999999987 6776554 8888888774
Q ss_pred ccchhhHHHHhhcCC-CCCCCcchHHH------HHHHHHHHcCCC
Q 027950 165 ELNPLELQVRKADGI-TKAWPVPLIFV------HYVILLRQAGSF 202 (216)
Q Consensus 165 ~~~~~~~l~~~g~~~-~~~~~~~l~~~------~~~~~l~~~g~~ 202 (216)
+++++..+.+. +..+.||+|.| .++++|++.|+.
T Consensus 268 ----~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad 308 (327)
T 1sw6_A 268 ----LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 308 (327)
T ss_dssp ----HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC
T ss_pred ----HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44555554332 46678888887 577888888775
No 82
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=1.9e-24 Score=168.92 Aligned_cols=149 Identities=22% Similarity=0.234 Sum_probs=124.9
Q ss_pred CCCCcccccCCCCCCC-----------CCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCC--------------
Q 027950 30 QSSLDPIRRSPVQDEL-----------TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDL-------------- 84 (216)
Q Consensus 30 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~-------------- 84 (216)
.+..+.++.++..+.. ....+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 67 ~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 146 (273)
T 2pnn_A 67 NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY 146 (273)
T ss_dssp TTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCC
T ss_pred cCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccccccc
Confidence 3777777665554321 112356799999999999999999999999999999886
Q ss_pred CCchHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCCCC------
Q 027950 85 DGRTALHIAACEGHVEVVKLLLS---KKANIDARDRWGSTAAADAKYYGN---------VEVYNILKARGAKVP------ 146 (216)
Q Consensus 85 ~g~t~L~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~a~~~g~---------~~~~~~Ll~~g~~~~------ 146 (216)
.|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+ .+++++|+++|+++|
T Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~ 226 (273)
T 2pnn_A 147 FGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE 226 (273)
T ss_dssp SCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence 79999999999999999999999 999999999999999999999998 799999999999875
Q ss_pred ----CCCCCchhcccCCCCcccccchhhHHHHhhc-CCCCC
Q 027950 147 ----KTKRTPMTVANPREVPEYELNPLELQVRKAD-GITKA 182 (216)
Q Consensus 147 ----~~g~t~l~~a~~~~~~~~~~~~~~~l~~~g~-~~~~~ 182 (216)
..|.||||+|+..+..+ ++++|+++|+ ++...
T Consensus 227 ~~~d~~g~TpL~~A~~~g~~~----iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 227 EITNRKGLTPLALAASSGKIG----VLAYILQREIHEPECR 263 (273)
T ss_dssp GCCCTTSCCHHHHHHHTTCHH----HHHHHHHHHTC-----
T ss_pred cccCCCCCCHHHHHHHhChHH----HHHHHHHCCCCCchhh
Confidence 23999999999988655 5889999999 66543
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=4.9e-26 Score=168.71 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=72.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCchHHHHHHHcCCH----HHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 027950 54 TMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHV----EVVKLLLSKKANIDARDRWGSTAAADAKY 128 (216)
Q Consensus 54 ~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~a~~~~~~----~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~ 128 (216)
.++|+.|+..|+.+.++.++..+. +..+ ..|.||||+|+..++. +++++|++.|++++.+|..|+||||+|+.
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 345566666666666655555432 2233 4455666666655543 35566666666666666666666666665
Q ss_pred cCC------HHHHHHHHHCCCCCCCC---CC-CchhcccCCCCcc-cccchhhHHHH-hhcCCC---CCCCcchHHH
Q 027950 129 YGN------VEVYNILKARGAKVPKT---KR-TPMTVANPREVPE-YELNPLELQVR-KADGIT---KAWPVPLIFV 190 (216)
Q Consensus 129 ~g~------~~~~~~Ll~~g~~~~~~---g~-t~l~~a~~~~~~~-~~~~~~~~l~~-~g~~~~---~~~~~~l~~~ 190 (216)
.|+ .+++++|+++|+++|.. |. ||||+|+..+..+ -...++++|+. .|++++ ..+.||++.|
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 554 34556666666665544 55 6666655533221 12233455555 555554 3445555555
No 84
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=4.4e-24 Score=171.61 Aligned_cols=169 Identities=24% Similarity=0.204 Sum_probs=114.0
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCC-CccchHHHHHHHHcCCHHHHHHHHhCCCCCC--------------------
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPE-NLDSTMQLLFMACSGDVKGVEDLLNEGIDVN-------------------- 80 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~-------------------- 80 (216)
..++.....++++.++.++..+...... +..|.||||+|+..|+.++|++|+++|++++
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 106 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVK 106 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccch
Confidence 4456667788888888877766544333 3458899999999999999999998877554
Q ss_pred -------------ccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHH
Q 027950 81 -------------SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR----------DRWGSTAAADAKYYGNVEVYNI 137 (216)
Q Consensus 81 -------------~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~g~t~L~~a~~~g~~~~~~~ 137 (216)
..+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++
T Consensus 107 ~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~ 186 (337)
T 4g8k_A 107 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 186 (337)
T ss_dssp HHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHH
T ss_pred hhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHH
Confidence 34566778888888888888888888887777654 3357788888888888888888
Q ss_pred HHH-CCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH
Q 027950 138 LKA-RGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 138 Ll~-~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~ 190 (216)
|++ .|+++|.. |.|+++.++..........++++|++.|++++ ..+.||+|.+
T Consensus 187 LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 187 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 246 (337)
T ss_dssp HHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred HHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 774 47776544 66776655332222212234555666666554 2344555554
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.4e-23 Score=168.65 Aligned_cols=148 Identities=22% Similarity=0.221 Sum_probs=130.8
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCchHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCCHH
Q 027950 49 ENLDSTMQLLFMACSGDVKGVEDLLN-EGIDVNSIDLDGRTALHIAACEGH----VEVVKLLLSKKANIDARDRWGSTAA 123 (216)
Q Consensus 49 ~~~~~~t~L~~a~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~a~~~~~----~~~~~~Ll~~g~~~~~~~~~g~t~L 123 (216)
.+..|.||||+|+..|+.+++++|++ .|++++..+..|.|+++.++..+. ..++++|+++|++++.++..|+|||
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L 243 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 243 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 35568999999999999999999995 699999999999999998876543 3578999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHC-CCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCCCCcchHHH------HHH
Q 027950 124 ADAKYYGNVEVYNILKAR-GAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKAWPVPLIFV------HYV 193 (216)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~-g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~------~~~ 193 (216)
|+|+..|+.++++.|++. |+++|.. |+||||+|+..+..+ ++++|+++|++++.. +|++.| .++
T Consensus 244 ~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~----iv~~Ll~~GAd~n~~--~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 244 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK----IAELLCKRGASTDCG--DLVMTARRNYDHSLV 317 (337)
T ss_dssp HHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHH----HHHHHHTTSCSSTTC--CHHHHHHHTTCHHHH
T ss_pred HHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCC--CHHHHHHHcCCHHHH
Confidence 999999999999999975 8888764 999999999988655 588999999998864 588887 689
Q ss_pred HHHHHcCCC
Q 027950 194 ILLRQAGSF 202 (216)
Q Consensus 194 ~~l~~~g~~ 202 (216)
++|++.|+.
T Consensus 318 ~~Ll~~GA~ 326 (337)
T 4g8k_A 318 KVLLSHGAK 326 (337)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHCcCC
Confidence 999999985
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.3e-23 Score=155.66 Aligned_cols=150 Identities=16% Similarity=0.102 Sum_probs=122.8
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCH----HHHHHHHhCCCCCCccCCCCchHHHHHHHcCC
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDV----KGVEDLLNEGIDVNSIDLDGRTALHIAACEGH 98 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~ 98 (216)
.+|..++.|..+.+....... .+...+..|.||||+|+..|+. +++++|+++|+++|.++..|.||||+|+..++
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~-~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~ 87 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKG-YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGG 87 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHS-SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHhcC-cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 356667778877776655443 3333336699999999999975 58999999999999999999999999999887
Q ss_pred ------HHHHHHHHhCCCCCCCCCCCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCCC---CCCchhcccCCCCc
Q 027950 99 ------VEVVKLLLSKKANIDARDRWGS-TAAADAKYYG-----NVEVYNILKA-RGAKVPKT---KRTPMTVANPREVP 162 (216)
Q Consensus 99 ------~~~~~~Ll~~g~~~~~~~~~g~-t~L~~a~~~g-----~~~~~~~Ll~-~g~~~~~~---g~t~l~~a~~~~~~ 162 (216)
.+++++|++.|++++.+|..|+ ||||+|+..+ ..+++++|++ +|++++.. |.||||+|+..+..
T Consensus 88 ~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 88 NDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp TCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 5789999999999999999999 9999999954 3569999999 99999765 99999999998876
Q ss_pred ccccchhhHHHHhhc
Q 027950 163 EYELNPLELQVRKAD 177 (216)
Q Consensus 163 ~~~~~~~~~l~~~g~ 177 (216)
+. ++++.....
T Consensus 168 ~~----v~~L~~~~~ 178 (186)
T 3t8k_A 168 IA----LKMMEDYIK 178 (186)
T ss_dssp HH----HHHHHHHHH
T ss_pred HH----HHHHHHHHH
Confidence 54 445444443
No 87
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.5e-25 Score=171.31 Aligned_cols=161 Identities=18% Similarity=0.142 Sum_probs=137.5
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHH
Q 027950 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (216)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 102 (216)
+++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++
T Consensus 24 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v 103 (229)
T 2vge_A 24 LLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVIC 103 (229)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 34555667888888888777766666788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCC-CCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhh
Q 027950 103 KLLLSKKANIDARD-RWGSTAAADA--KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKA 176 (216)
Q Consensus 103 ~~Ll~~g~~~~~~~-~~g~t~L~~a--~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g 176 (216)
++|++.|++++..+ ..|+||||+| +..|+.+++++|+++|++++.. |.++++.++.....+ +++..|
T Consensus 104 ~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~-------~ll~~g 176 (229)
T 2vge_A 104 MALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDE-------LSFREG 176 (229)
T ss_dssp HHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTB-------CCBCTT
T ss_pred HHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccc-------cCcccc
Confidence 99999999999986 6999999999 9999999999999999998776 788888666555433 334556
Q ss_pred cCC-----CCCCCcchHHH
Q 027950 177 DGI-----TKAWPVPLIFV 190 (216)
Q Consensus 177 ~~~-----~~~~~~~l~~~ 190 (216)
+++ +..+.||++.|
T Consensus 177 a~~~~~~~d~~G~TpL~~A 195 (229)
T 2vge_A 177 ESVTVLRRDGPEETDWWWA 195 (229)
T ss_dssp CEEEEEESSCTTCSSEEEE
T ss_pred ccccccccCCCcccHHHHH
Confidence 663 46688998876
No 88
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=3.5e-24 Score=168.03 Aligned_cols=152 Identities=23% Similarity=0.216 Sum_probs=133.6
Q ss_pred cccccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHH-----HcCCHHHHHHHHhCCCCCCccCCCCchHHHHHH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMA-----CSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAA 94 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~L~~a~-----~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~ 94 (216)
..++......+..+.++.++..+. .....+..|.||||+|+ ..++.++++.|++.|.+++..+..|.||||+|+
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~ 191 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAV 191 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 355555666888888888888776 66667888999999999 568899999999999988888999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC---CCCchhcccCCCCcccccchhh
Q 027950 95 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA-RGAKVPKT---KRTPMTVANPREVPEYELNPLE 170 (216)
Q Consensus 95 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~-~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~ 170 (216)
..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++ .|++++.. |.|||++|+..+..+ +++
T Consensus 192 ~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~----iv~ 267 (276)
T 4hbd_A 192 SHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSE----IAS 267 (276)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHH----HHH
T ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHH----HHH
Confidence 9999999999999999999999999999999999999999999999 89998755 999999999988655 466
Q ss_pred HHHHhh
Q 027950 171 LQVRKA 176 (216)
Q Consensus 171 ~l~~~g 176 (216)
+|++++
T Consensus 268 ~Ll~~~ 273 (276)
T 4hbd_A 268 MLYSRM 273 (276)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 666654
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.8e-23 Score=161.17 Aligned_cols=108 Identities=31% Similarity=0.334 Sum_probs=102.7
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHH
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 128 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~a~~ 128 (216)
+..|.||||+|+..|+.++++.|++ |++++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4579999999999999999999999 99999999999999999999999999999999999999998 789999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCchhcccC
Q 027950 129 YGNVEVYNILKARGAKVPKT---KRTPMTVANP 158 (216)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~ 158 (216)
.|+.+++++|+++|++++.. |.||||+|+.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999999999755 9999999975
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=6.8e-23 Score=162.70 Aligned_cols=132 Identities=21% Similarity=0.296 Sum_probs=118.2
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhCCCCCCc------cCCCCchHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCCH
Q 027950 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNS------IDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTA 122 (216)
Q Consensus 52 ~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~ 122 (216)
...++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|+||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 356889999999999999999999999987 588999999999987 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCCCCcchHHH
Q 027950 123 AADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKAWPVPLIFV 190 (216)
Q Consensus 123 L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~ 190 (216)
||+|+..|+.+++++|+++|++++.. |.|||++|+..+..+ ++++|+..|++ .+.||++.|
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~----iv~~Ll~~ga~---~g~tpLh~A 293 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE----CEELLEQAQAG---TFAFPLHVD 293 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH----HHHHHHHHHHH---TTSSCCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHhcCC---CCCChhHHH
Confidence 99999999999999999999999665 999999999887655 47888888887 467898877
No 91
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=5.9e-24 Score=152.88 Aligned_cols=133 Identities=21% Similarity=0.243 Sum_probs=110.5
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCch-HHHHHHHcCCH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRT-ALHIAACEGHV 99 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-~L~~a~~~~~~ 99 (216)
...++.....+..+.++.++..+......+..|.||||+|+ .|+.+++++|+++|++++.++..|.| |||+|+..|+.
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~ 91 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFL 91 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCH
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCH
Confidence 34555666678888888888777666677888999999985 99999999999999999999999999 99999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchh
Q 027950 100 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMT 154 (216)
Q Consensus 100 ~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~ 154 (216)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |.||.+
T Consensus 92 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 92 DTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 9999999999999999999999999999999999999999999999765 777765
No 92
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=9e-24 Score=148.50 Aligned_cols=123 Identities=20% Similarity=0.210 Sum_probs=112.2
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCC-CchHHHHHHHcCCH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD-GRTALHIAACEGHV 99 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~a~~~~~~ 99 (216)
..+++.....+..+.++.++..+......+..|.||||+|+. |+.+++++|+++|++++.++.. |.||||+|+..|+.
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 91 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFL 91 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 344555666788888888777776666778889999999999 9999999999999999999999 99999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 027950 100 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (216)
Q Consensus 100 ~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~ 144 (216)
+++++|+++|++++..|..|+||||+|+..++.+++++|+++|++
T Consensus 92 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 92 DTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999985
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=4.2e-23 Score=145.05 Aligned_cols=121 Identities=29% Similarity=0.378 Sum_probs=109.9
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
...+.+...+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 95 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 44455566788888888777776666678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 027950 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG 142 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g 142 (216)
+++|+++|++++..|..|+||||+|+..|+.+++++|+++|
T Consensus 96 v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 96 AEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999876
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.5e-23 Score=165.24 Aligned_cols=135 Identities=20% Similarity=0.170 Sum_probs=112.3
Q ss_pred ccccccCCCCcccccCCCCCCCCCC------CCccchHHHHHHHHc---CCHHHHHHHHhCCCCCCccCCCCchHHHHHH
Q 027950 24 RFSFGRQSSLDPIRRSPVQDELTVP------ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAA 94 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~t~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~ 94 (216)
++.....++.+.+..++..+..... .+..|.||||+|+.. |+.+++++|+++|+++|.+|..|.||||+|+
T Consensus 155 L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~ 234 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAA 234 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHH
T ss_pred HhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 3444556666666665544443333 477899999999997 8999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCchhcccCCCC
Q 027950 95 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREV 161 (216)
Q Consensus 95 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~g~t~l~~a~~~~~ 161 (216)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..++
T Consensus 235 ~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 235 LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFAFPLHVDYSWVI 298 (301)
T ss_dssp HTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---TTSSCCC-------
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---CCCChhHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999987 68999999987664
No 95
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.7e-22 Score=170.73 Aligned_cols=131 Identities=21% Similarity=0.285 Sum_probs=112.2
Q ss_pred chHHHHHHHHcCCHHHHHHHHhCCCCCCcc------CCCCchHHHHHHH---cCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 027950 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSI------DLDGRTALHIAAC---EGHVEVVKLLLSKKANIDARDRWGSTAA 123 (216)
Q Consensus 53 ~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~------~~~g~t~L~~a~~---~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 123 (216)
..+.||.|+..|+.+.++.|++.|+++|.. +..|.||||+|+. .|+.+++++|+++|++++.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 447899999999999999999999999877 7889999999976 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCCCCCCcchHHH
Q 027950 124 ADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKAWPVPLIFV 190 (216)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~ 190 (216)
|+|+..|+.+++++|+++|+++|.. |.||||+|+..+..+ ++++|+..|++++. +|+|.+
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~----~~~~Ll~~ga~~~~---~~~h~~ 274 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE----CEELLEQAQAGTFA---FPLHVD 274 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHH----HHHHHHHTCC-------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHhCCCCCC---Ccceee
Confidence 9999999999999999999999765 999999999888655 58899999999875 455544
No 96
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=5e-23 Score=140.45 Aligned_cols=104 Identities=39% Similarity=0.538 Sum_probs=96.7
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 027950 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (216)
Q Consensus 49 ~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~ 128 (216)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++..|..|+||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCc
Q 027950 129 YGNVEVYNILKARGAKVPKT---KRTP 152 (216)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~~~---g~t~ 152 (216)
.|+.+++++|+++|+++|.. |.+|
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 99999999999999998644 5554
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=3.2e-22 Score=162.67 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=112.4
Q ss_pred CccchHHHHHHHHc-CCHHHHHHHHhCCCCCCccC--CCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 027950 50 NLDSTMQLLFMACS-GDVKGVEDLLNEGIDVNSID--LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (216)
Q Consensus 50 ~~~~~t~L~~a~~~-g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a 126 (216)
...+.|+||+|+.. |+.++++.|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34567899999999 99999999999999999988 8899999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcC
Q 027950 127 KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADG 178 (216)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~ 178 (216)
+..|+.+++++|+++|++++.. |.||||+|+..+..++ +++|+..+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~i----v~lLl~~~~~ 326 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI----VTLLRLAKMR 326 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH----HHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHH----HHHHHHcCCC
Confidence 9999999999999999999765 9999999998886653 5666665533
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=2.8e-22 Score=138.22 Aligned_cols=118 Identities=35% Similarity=0.459 Sum_probs=105.0
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHH
Q 027950 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (216)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll 106 (216)
....++.+.++.+...+......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+
T Consensus 9 A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 88 (126)
T 1n0r_A 9 AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (126)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 33455566665555555445556778999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 027950 107 SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (216)
Q Consensus 107 ~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~ 144 (216)
+.|++++..+..|.|||++|+..|+.+++++|+++|++
T Consensus 89 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 89 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999986
No 99
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=7.7e-23 Score=164.11 Aligned_cols=159 Identities=13% Similarity=0.005 Sum_probs=104.5
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCC---HHHHHHHHhCC-CCCCccCCCCchHHHHHHH-
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGD---VKGVEDLLNEG-IDVNSIDLDGRTALHIAAC- 95 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~---~~~v~~Ll~~~-~~~~~~~~~g~t~L~~a~~- 95 (216)
..+++.+...+..+.++.++..+......+..|.||||+|+..|+ .++++.|++.+ ++++.++..|.||||+|+.
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~ 211 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 211 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHH
Confidence 345555666888888888888887777888899999999999998 78888888876 6799999999999999999
Q ss_pred ---cCCHHHHHHHHhC--------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCC
Q 027950 96 ---EGHVEVVKLLLSK--------------------KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV-PKTKRT 151 (216)
Q Consensus 96 ---~~~~~~~~~Ll~~--------------------g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~-~~~g~t 151 (216)
.|+.+++++|++. |++++..+..|.||||+|+. +++|++++.+. +..|+|
T Consensus 212 ~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~~n~~d~~G~T 285 (327)
T 1sw6_A 212 SGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANMLNAQDSNGDT 285 (327)
T ss_dssp HTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHTTTCCCTTSCC
T ss_pred ccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhCCCCCCCCCCC
Confidence 8999999999987 56666555555555555553 45555553322 222555
Q ss_pred chhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHH
Q 027950 152 PMTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIF 189 (216)
Q Consensus 152 ~l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~ 189 (216)
|||+|+..+..+ ++++|++.|++++ ..+.||++.
T Consensus 286 pLh~A~~~g~~~----~v~~Ll~~Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 286 CLNIAARLGNIS----IVDALLDYGADPFIANKSGLRPVDF 322 (327)
T ss_dssp HHHHHHHHCCHH----HHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred HHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHH
Confidence 555555554332 3455555555554 334445443
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.4e-21 Score=151.22 Aligned_cols=124 Identities=23% Similarity=0.258 Sum_probs=112.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHhCCCCCC------ccCCCCchHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 027950 53 STMQLLFMACSGDVKGVEDLLNEGIDVN------SIDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTAA 123 (216)
Q Consensus 53 ~~t~L~~a~~~g~~~~v~~Ll~~~~~~~------~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L 123 (216)
..++|+.|+..|+.+.++.+++.|++++ ..+..|.||||+|+.. ++.+++++|+++|++++.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 4579999999999999999999998854 4478899999999999 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCCcccccchhhHHHHhhcCCC
Q 027950 124 ADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGIT 180 (216)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~l~~~g~~~~ 180 (216)
|+|+..|+.+++++|+++|++++.. |.||||+|+..+..+ ++++|++.|++..
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~----~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH----CEELLTQALSGRF 265 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCC
Confidence 9999999999999999999999765 999999999988655 4788888888653
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=5.5e-22 Score=167.58 Aligned_cols=131 Identities=20% Similarity=0.170 Sum_probs=107.6
Q ss_pred ccccccCCCCcccccCCCCCCCCCCC------CccchHHHHHHHH---cCCHHHHHHHHhCCCCCCccCCCCchHHHHHH
Q 027950 24 RFSFGRQSSLDPIRRSPVQDELTVPE------NLDSTMQLLFMAC---SGDVKGVEDLLNEGIDVNSIDLDGRTALHIAA 94 (216)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~L~~a~~---~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~ 94 (216)
++.+...++.+.++.++..+...... +..|.||||+||. .|+.+++++|+++|+++|.+|..|.||||+|+
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~ 215 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAA 215 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHT
T ss_pred HHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 45555677777777766666544333 6789999999976 89999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCchhccc
Q 027950 95 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVAN 157 (216)
Q Consensus 95 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~g~t~l~~a~ 157 (216)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|.++
T Consensus 216 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~---~~~h~~~ 275 (497)
T 3lvq_E 216 LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA---FPLHVDY 275 (497)
T ss_dssp TTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC---Ccceeec
Confidence 99999999999999999999999999999999999999999999999999876 5777654
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.5e-21 Score=153.36 Aligned_cols=106 Identities=23% Similarity=0.188 Sum_probs=98.3
Q ss_pred CCccchHHHHHHHHc---CCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 027950 49 ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (216)
Q Consensus 49 ~~~~~~t~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 125 (216)
.+..|.||||+|+.. |+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 367799999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCchhcccCC
Q 027950 126 AKYYGNVEVYNILKARGAKVPKTKRTPMTVANPR 159 (216)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~~~g~t~l~~a~~~ 159 (216)
|+..|+.+++++|+++|++ .+++|.+...
T Consensus 245 A~~~~~~~~v~~Ll~~ga~-----~~~~~~~v~~ 273 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSG-----RFNSHVHVEY 273 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTT-----CCCSSCCCCC
T ss_pred HHHcCCHHHHHHHHHcCCC-----CCCcceeeec
Confidence 9999999999999999885 3666666543
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=2.6e-20 Score=126.11 Aligned_cols=95 Identities=38% Similarity=0.467 Sum_probs=86.0
Q ss_pred CCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 027950 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (216)
Q Consensus 44 ~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 123 (216)
......+.+|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHH
Q 027950 124 ADAKYYGNVEVYNIL 138 (216)
Q Consensus 124 ~~a~~~g~~~~~~~L 138 (216)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999876
No 104
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=7.8e-21 Score=133.43 Aligned_cols=110 Identities=25% Similarity=0.301 Sum_probs=97.7
Q ss_pred CCCCCccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCc
Q 027950 76 GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTP 152 (216)
Q Consensus 76 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~ 152 (216)
|+|+ .++..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.. |.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5666 67889999999999999999999999999999999999999999999999999999999999999766 9999
Q ss_pred hhcccCCCCcccccchhhHHHHhhcCCC---CCCCcchHHH
Q 027950 153 MTVANPREVPEYELNPLELQVRKADGIT---KAWPVPLIFV 190 (216)
Q Consensus 153 l~~a~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~l~~~ 190 (216)
||+|+..+..+ ++++++..|++++ ..+.||++.|
T Consensus 80 L~~A~~~~~~~----~v~~Ll~~ga~~~~~~~~g~tpl~~A 116 (137)
T 3c5r_A 80 LHDAAKNGHVD----IVKLLLSYGASRNAVNIFGLRPVDYT 116 (137)
T ss_dssp HHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCGGGGC
T ss_pred HHHHHHcCCHH----HHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 99999888654 5888899999986 5677888877
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.5e-20 Score=122.27 Aligned_cols=90 Identities=39% Similarity=0.533 Sum_probs=81.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcccCCCC
Q 027950 85 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREV 161 (216)
Q Consensus 85 ~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~~~~~ 161 (216)
+|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |.||||+|+..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 4789999999999999999999999999999999999999999999999999999999998665 9999999998885
Q ss_pred cccccchhhHHHHhhcC
Q 027950 162 PEYELNPLELQVRKADG 178 (216)
Q Consensus 162 ~~~~~~~~~~l~~~g~~ 178 (216)
.+ +++++++.|++
T Consensus 81 ~~----~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LE----VVKLLLEAGAY 93 (93)
T ss_dssp HH----HHHHHHHTTCC
T ss_pred HH----HHHHHHHcCCC
Confidence 54 47788888764
No 106
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=1.9e-21 Score=134.14 Aligned_cols=109 Identities=28% Similarity=0.248 Sum_probs=96.7
Q ss_pred cccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHH
Q 027950 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
...++.....++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS 87 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 34455566677888888777777666667788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYY 129 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~ 129 (216)
++++|++.|++++.+|..|+||+|+|...
T Consensus 88 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 88 CVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 99999999999999999999999999543
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=3.6e-20 Score=150.58 Aligned_cols=134 Identities=23% Similarity=0.279 Sum_probs=106.5
Q ss_pred cccccC-CCCcccccCCCCCCCCCCCC--ccchHHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCchHHHHHHHcCCHHH
Q 027950 25 FSFGRQ-SSLDPIRRSPVQDELTVPEN--LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (216)
Q Consensus 25 ~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~ 101 (216)
+..... +..+.++.++..+......+ ..|.||||+|+..|+.+++++|+++|+++|..|..|.||||+|+..|+.++
T Consensus 204 ~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~ 283 (368)
T 3jue_A 204 FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGL 283 (368)
T ss_dssp HHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHH
Confidence 344555 77777777766665555555 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCchhcccC
Q 027950 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV------PKTKRTPMTVANP 158 (216)
Q Consensus 102 ~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~------~~~g~t~l~~a~~ 158 (216)
+++|+++|++++..|..|.||||+|+..|+.+++++|+..+..- +..+.|++.++..
T Consensus 284 v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 284 ACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999876442 1227777766543
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=3.7e-22 Score=162.81 Aligned_cols=143 Identities=15% Similarity=0.051 Sum_probs=97.1
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhCCCCC---CccCCCCchHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCCHH
Q 027950 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDV---NSIDLDGRTALHIAACEGHVEVVKLLLSKKANI---DARDRWGSTAA 123 (216)
Q Consensus 50 ~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L 123 (216)
+.++.||||+|+..|+.+++++|++.|+.. +..+..|.||||+|+..|+.+++++|++.|+++ +..+.. .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 344568888888888888888888887621 123345678888888888888888888888652 222222 7888
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCC-----CCCCCchhccc-CCCCcccccchhhHHHHhhcCCCCCCCcchHHH------H
Q 027950 124 ADAKYYGNVEVYNILKARGAKVP-----KTKRTPMTVAN-PREVPEYELNPLELQVRKADGITKAWPVPLIFV------H 191 (216)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~-----~~g~t~l~~a~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~------~ 191 (216)
|+|+..|+.+++++|+++|++++ ..|.||||+|+ ..+..+ ++++|+..|+. +.||++.| .
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e----iv~~Ll~~ga~----~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN----VINFLLDCPVM----LAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH----HHHHHTTSHHH----HHHHHHCTTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH----HHHHHHhCCCc----cchHHHHHHHCCCHH
Confidence 88888888888888888888844 34888888888 777655 36666666643 45565555 4
Q ss_pred HHHHHHHcCC
Q 027950 192 YVILLRQAGS 201 (216)
Q Consensus 192 ~~~~l~~~g~ 201 (216)
++++|++.|+
T Consensus 240 vv~lL~~~ga 249 (376)
T 2aja_A 240 VNPFIARHVN 249 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhcCc
Confidence 5566665553
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=5.4e-21 Score=144.93 Aligned_cols=127 Identities=23% Similarity=0.194 Sum_probs=104.1
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~ 100 (216)
..++.....+..+.++.++..+......+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 75 NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYAD 154 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHH
T ss_pred cccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHH
Confidence 344445567778888877777766666788899999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT 148 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~ 148 (216)
++++|+++|++++.+|..|+|||++|+..++.++++.|++.|+..+..
T Consensus 155 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 155 IVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp HHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------
T ss_pred HHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhcc
Confidence 999999999999999999999999999999999999999999986443
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=9.2e-20 Score=134.26 Aligned_cols=127 Identities=27% Similarity=0.269 Sum_probs=106.5
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~a~~~~~~~ 100 (216)
.+++.....+..+.++.++. +......+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+
T Consensus 46 t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~ 124 (183)
T 3deo_A 46 TPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 124 (183)
T ss_dssp HHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHH
Confidence 34455566788888887777 55555667889999999999999999999999999999888 88999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCchhcccCCCCcc
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPE 163 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~g~t~l~~a~~~~~~~ 163 (216)
++++|+++|++++.+|..|+||||+|+..++. ..+.+++++|+..+..+
T Consensus 125 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--------------~~~~~~l~~a~~~~~~~ 173 (183)
T 3deo_A 125 VVEALVELGADIEVEDERGLTALELAREILKT--------------TPKGNPMQFGRRIGLEK 173 (183)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT--------------CCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC--------------cccccHHHHHHHcCHHH
Confidence 99999999999999999999999999875322 23567888777665433
No 111
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=1.7e-19 Score=138.81 Aligned_cols=106 Identities=29% Similarity=0.292 Sum_probs=94.7
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCchHHHHHHHcCCHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVE 100 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~a~~~~~~~ 100 (216)
..++.....+..+.++.++. +......+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 47 TPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 125 (244)
T ss_dssp HHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 44555666788888888777 55556677889999999999999999999999999999988 78999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 027950 101 VVKLLLSKKANIDARDRWGSTAAADAKY 128 (216)
Q Consensus 101 ~~~~Ll~~g~~~~~~~~~g~t~L~~a~~ 128 (216)
++++|+++|++++.+|..|+||||+|+.
T Consensus 126 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 126 VVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 9999999999999999999999999984
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=8.4e-22 Score=160.70 Aligned_cols=149 Identities=12% Similarity=-0.032 Sum_probs=120.6
Q ss_pred ccccccccCCCCcccccCCCCCCCC---CCCCccchHHHHHHHHcCCHHHHHHHHhCCCCC---CccCCCCchHHHHHHH
Q 027950 22 NMRFSFGRQSSLDPIRRSPVQDELT---VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDV---NSIDLDGRTALHIAAC 95 (216)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~L~~a~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~a~~ 95 (216)
..++..+..|..+.++.++..+... ...+..+.||||+|+..|+.++|++|+++|+++ +..+.. .||||+|+.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence 4455566788888888877766522 234557899999999999999999999999752 222222 899999999
Q ss_pred cCCHHHHHHHHhCCCCCCC--CCCCCCCHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCchhcccCCCCcccccchhhHH
Q 027950 96 EGHVEVVKLLLSKKANIDA--RDRWGSTAAADAK-YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQ 172 (216)
Q Consensus 96 ~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~a~-~~g~~~~~~~Ll~~g~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l 172 (216)
.|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|+++|++ |.||+++|+..+..+ +++++
T Consensus 173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----~~taL~~Aa~~g~~e----vv~lL 244 (376)
T 2aja_A 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----LAYAEIHEFEYGEKY----VNPFI 244 (376)
T ss_dssp TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----HHHHHHCTTTTTTTT----HHHHH
T ss_pred CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----cchHHHHHHHCCCHH----HHHHH
Confidence 9999999999999999887 7888999999999 99999999999998753 899999999988765 46777
Q ss_pred HHhhcCC
Q 027950 173 VRKADGI 179 (216)
Q Consensus 173 ~~~g~~~ 179 (216)
+..|+++
T Consensus 245 ~~~ga~~ 251 (376)
T 2aja_A 245 ARHVNRL 251 (376)
T ss_dssp HHHHHHH
T ss_pred HhcCccc
Confidence 7777654
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=4e-19 Score=120.92 Aligned_cols=96 Identities=36% Similarity=0.409 Sum_probs=88.7
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhccc
Q 027950 81 SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVAN 157 (216)
Q Consensus 81 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a~ 157 (216)
.+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.. |.|||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999998654 999999999
Q ss_pred CCCCcccccchhhHHHHhhcCCC
Q 027950 158 PREVPEYELNPLELQVRKADGIT 180 (216)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~g~~~~ 180 (216)
..+..+ +++++++.|++++
T Consensus 84 ~~~~~~----~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHE----IVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHH----HHHHHHTTSSSHH
T ss_pred HCCCHH----HHHHHHHcCCCCC
Confidence 988554 5889999999986
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=2.3e-17 Score=111.46 Aligned_cols=84 Identities=26% Similarity=0.340 Sum_probs=75.5
Q ss_pred CccCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCchhcc
Q 027950 80 NSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVA 156 (216)
Q Consensus 80 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~a~~~g~~~~~~~Ll~~g~~~~~~---g~t~l~~a 156 (216)
...+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |.||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 345778999999999999999999999999999999999999999999999999999999999998755 99999999
Q ss_pred cCCCCcc
Q 027950 157 NPREVPE 163 (216)
Q Consensus 157 ~~~~~~~ 163 (216)
+..+..+
T Consensus 98 ~~~~~~~ 104 (110)
T 2zgd_A 98 IDNGNED 104 (110)
T ss_dssp HHHTCHH
T ss_pred HHcCCHH
Confidence 9877654
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=50.55 E-value=15 Score=18.74 Aligned_cols=18 Identities=33% Similarity=0.327 Sum_probs=14.2
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 027950 56 QLLFMACSGDVKGVEDLL 73 (216)
Q Consensus 56 ~L~~a~~~g~~~~v~~Ll 73 (216)
.+..||..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 466788889999988774
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=31.97 E-value=1.5e+02 Score=24.09 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=34.8
Q ss_pred HHcCCHHHHHHHHhCCCCCCccC--------------CCCchHHHHHHHcCCHHHHHHHHh
Q 027950 61 ACSGDVKGVEDLLNEGIDVNSID--------------LDGRTALHIAACEGHVEVVKLLLS 107 (216)
Q Consensus 61 ~~~g~~~~v~~Ll~~~~~~~~~~--------------~~g~t~L~~a~~~~~~~~~~~Ll~ 107 (216)
+..|+...|...+..|.+++..- .-|.|.+|+|.+..+-+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 45799999999998887765321 236778888888888777777765
Done!