BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027951
MSMASVSVIAFLAIFFVLQPLTAPSNFLSPLSPLLAPAFENVCDKVTCGKGKCKASQNST
FFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSPSPAQEKAAKKNESIFDLC
RWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPCYKECSIGMDCKNMGISVPLPPPP
PPPTSLADSSENQAASNLLGNAHWLILLTWSLALVL

High Scoring Gene Products

Symbol, full name Information P value
AT4G14746 protein from Arabidopsis thaliana 6.2e-46

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027951
        (216 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955446 - symbol:AT4G14746 "AT4G14746" speci...   482  6.2e-46   1


>TAIR|locus:504955446 [details] [associations]
            symbol:AT4G14746 "AT4G14746" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0031225
            "anchored to membrane" evidence=TAS] InterPro:IPR000742
            SMART:SM00181 EMBL:CP002687 GO:GO:0031225 IPI:IPI00534860
            RefSeq:NP_680687.2 UniGene:At.45360 ProteinModelPortal:F4JIF2
            SMR:F4JIF2 EnsemblPlants:AT4G14746.1 GeneID:827129
            KEGG:ath:AT4G14746 OMA:CKEVECG PhylomeDB:F4JIF2 Uniprot:F4JIF2
        Length = 212

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 89/176 (50%), Positives = 115/176 (65%)

Query:    40 ENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCA 99
             +N+C +V CGKGKCKA  N+TF YECEC+ GWKQ     DQ+LKFLPCI P+CT +  C 
Sbjct:    36 DNICKEVECGKGKCKAPSNTTFMYECECEDGWKQ----FDQHLKFLPCITPNCTFDLTCG 91

Query:   100 PSPSPAQEKAAKKNE--SIFDLCRWIDCGGGSCKNTSMFSYSCQCAVDHYNLLNTSTFPC 157
              + SPAQ K   K+   S FD C+W+DCGGG C ++  F YSC C   + NL+N +TFPC
Sbjct:    92 EAASPAQPKPPPKDNITSFFDPCQWMDCGGGLCNSSMPFQYSCNCREGYSNLMNITTFPC 151

Query:   158 YKECSIGMDCKNMGISVXXXXXXXXXTSLADSSENQAASNLLGNAHWLILLTWSLA 213
              K+C++GMDC N+GI +          +L DSS+NQ   NL G++ W I L  SLA
Sbjct:   152 LKQCALGMDCLNLGIPLSNSSSSSP-PALPDSSKNQGL-NLRGSSLWWITLCVSLA 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       190   0.00091  110 3  11 22  0.41    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  193 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.17u 0.17s 16.34t   Elapsed:  00:00:01
  Total cpu time:  16.17u 0.17s 16.34t   Elapsed:  00:00:01
  Start:  Tue May 21 02:56:40 2013   End:  Tue May 21 02:56:41 2013

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