BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027951
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 37.4 bits (85), Expect = 0.069, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 14/71 (19%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWKQN------TMAVDQNLK-----FLPCIAPD 91
C + G G+C QN + C C +GW + MA NL C+ PD
Sbjct: 738 CPGLCYGNGRCTLDQNG---WHCVCQVGWSGSGCNVVMEMACGDNLDNDGDGLTDCVDPD 794
Query: 92 CTLNQDCAPSP 102
C +C SP
Sbjct: 795 CCQQNNCYASP 805
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 35.4 bits (80), Expect = 0.30, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G G+C QNS ++C C GW+ T D + + C+ PD
Sbjct: 838 CPDLCNGNGRCTLGQNS---WQCVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLVPD 894
Query: 92 CTLNQDCAPS 101
C L C S
Sbjct: 895 CCLQSTCQNS 904
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 35.4 bits (80), Expect = 0.30, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 38 AFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQN------TMAVDQNLK-----FLP 86
A + C + G G+C QN + C C +GW M NL
Sbjct: 760 AVRDGCPGLCFGNGRCTLDQNG---WHCVCQVGWSGTGCNVVMEMLCGDNLDNDGDGLTD 816
Query: 87 CIAPDCTLNQDCAPSP----SPAQEKAAKKNESIF 117
C+ PDC +C SP SP ++++++F
Sbjct: 817 CVDPDCCQQSNCYISPLCQGSPDPLDLIQQSQTLF 851
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 34.7 bits (78), Expect = 0.46, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 38 AFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQN------TMAVDQNLK-----FLP 86
A + C + G G+C QN + C C +GW M NL
Sbjct: 759 AVRDGCPGLCFGNGRCTLDQNG---WHCVCQVGWSGTGCNIVMEMLCGDNLDNDGDGLTD 815
Query: 87 CIAPDCTLNQDCAPSP 102
C+ PDC +C SP
Sbjct: 816 CVDPDCCQQSNCYVSP 831
>sp|Q9R1K2|TEN2_RAT Teneurin-2 OS=Rattus norvegicus GN=Tenm2 PE=1 SV=2
Length = 2774
Score = 34.7 bits (78), Expect = 0.54, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G G+C QNS ++C C GW+ T D + + C+ PD
Sbjct: 810 CPDLCNGNGRCTLGQNS---WQCVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLDPD 866
Query: 92 CTLNQDCAPS 101
C L C S
Sbjct: 867 CCLQSACQNS 876
>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1
Length = 2764
Score = 34.7 bits (78), Expect = 0.55, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G G+C QNS ++C C GW+ T D + + C+ PD
Sbjct: 800 CPDLCNGNGRCTLGQNS---WQCVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLDPD 856
Query: 92 CTLNQDCAPS 101
C L C S
Sbjct: 857 CCLQSACQNS 866
>sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=TENM2 PE=1 SV=3
Length = 2774
Score = 34.3 bits (77), Expect = 0.63, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G G+C QNS ++C C GW+ T D + + C+ PD
Sbjct: 810 CPDLCNGNGRCTLGQNS---WQCVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCLDPD 866
Query: 92 CTLNQDCAPS 101
C L C S
Sbjct: 867 CCLQSACQNS 876
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 14/71 (19%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G+C QN + C C GW+ T+ D + + C+ PD
Sbjct: 752 CPGLCNSNGRCTLDQNG---WHCVCQPGWRGAGCDVAMETLCTDSKDNEGDGLIDCMDPD 808
Query: 92 CTLNQDCAPSP 102
C L C P
Sbjct: 809 CCLQSSCQNQP 819
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 14/71 (19%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G+C QN + C C GW+ T+ D + + C+ PD
Sbjct: 743 CPGLCNSNGRCTLDQNG---WHCVCQPGWRGAGCDVAMETLCTDSKDNEGDGLIDCMDPD 799
Query: 92 CTLNQDCAPSP 102
C L C P
Sbjct: 800 CCLQSSCQNQP 810
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 32.3 bits (72), Expect = 2.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 14/71 (19%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWK-------QNTMAVD----QNLKFLPCIAPD 91
C + G+C QN + C C GW+ T+ D + + C+ PD
Sbjct: 633 CPGLCNSNGRCTLDQNG---WHCVCQPGWRGAGCDVAMETLCADGKDSEGDGLVDCMDPD 689
Query: 92 CTLNQDCAPSP 102
C L C P
Sbjct: 690 CCLQSSCQTQP 700
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 30 PLSPLLAPAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIA 89
P+ + P E C K C G C+ S S F CEC+ GW DQ PC+
Sbjct: 1316 PMQTGILPGCE-PCHKKVCAHGMCQPSSQSGF--TCECEEGWM--GPLCDQRTND-PCLG 1369
Query: 90 PDCTLNQDCAPSPSPAQE---------KAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSC 140
C ++ C P + + + E +F+ C+ I C G C+ + + C
Sbjct: 1370 NKC-VHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQMIKCKHGKCRLSGVGQPYC 1428
Query: 141 QC 142
+C
Sbjct: 1429 EC 1430
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 37 PAFENVCDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMA 77
PA +NVCD TC G +Q F CEC LG+ + A
Sbjct: 1572 PAKKNVCDSNTCHNGGTCVNQWDAF--SCECPLGFGGKSCA 1610
>sp|G5EFX6|SLIT1_CAEEL Slit homolog 1 protein OS=Caenorhabditis elegans GN=slt-1 PE=3 SV=1
Length = 1410
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 33 PLLAPAFE--NVCDKVTCGKGKCKASQNSTFFYECECDLGW 71
P++ ++ + C + CG+G+C ASQNS+ F C+C G+
Sbjct: 1064 PMMDMEYQKTDACQQSACGQGECVASQNSSDF-TCKCHEGF 1103
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 43 CDKVTCGKGKCKASQNSTFFYECECDLGWKQNTMAVDQNLKFLPCIAPDCTLNQDCAPSP 102
C K C G C+ S + F CEC GW DQ PC+ C ++ C P
Sbjct: 1336 CHKKVCAHGTCQPSSQAGF--TCECQEGWM--GPLCDQRTND-PCLGNKC-VHGTCLPIN 1389
Query: 103 SPAQE---------KAAKKNESIFDLCRWIDCGGGSCKNTSMFSYSCQCA 143
+ + + E +F+ C+ I C G C+ + + C+C+
Sbjct: 1390 AFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECS 1439
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,978,958
Number of Sequences: 539616
Number of extensions: 3596746
Number of successful extensions: 27448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 26540
Number of HSP's gapped (non-prelim): 867
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)