BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027952
(216 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 20 PSKTSP-VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPC-NVTSK 77
P + P VVLLHGF S WR P L AG A+D G+G S R+ +
Sbjct: 29 PDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKEL 88
Query: 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130
+ +Y +VG GA VA FA HP+ +V I G
Sbjct: 89 VGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRG 141
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 20 PSKTSP-VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPC-NVTSK 77
P + P VVLLHGF S WR P L AG A+D G+G S R+ +
Sbjct: 23 PDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKEL 82
Query: 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130
+ +Y +VG GA VA FA HP+ +V I G
Sbjct: 83 VGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRG 135
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 1 MQVNFSESCI--MSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDI 58
M NF ++ + + + +K +P++LLHG+ + + W PLL A D+
Sbjct: 1 MFTNFEQTIVDTTEARINLVKAGHGAPLLLLHGYPQTHVMWHKIAPLLAN-NFTVVATDL 59
Query: 59 LGWGFSDLERLPPCNVT-SKR---EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE 114
G+G S P ++ SKR + ++ +VG GA VA A++HP
Sbjct: 60 RGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPH 119
Query: 115 AVENLVFID 123
V+ L +D
Sbjct: 120 RVKKLALLD 128
>pdb|2O2H|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With
1,2-Dichloroethane
pdb|2O2I|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With 1,3-Propandiol
Length = 300
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPC-----NVT 75
K +V HG +S WR P LE G A D++G G SD +L P +
Sbjct: 28 GKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASD--KLSPSGPDRYSYG 84
Query: 76 SKREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
+R+ + LW + ++LV G+A+ D+A H + V+ + F++A V
Sbjct: 85 EQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 136
>pdb|2QVB|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
pdb|2QVB|B Chain B, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
Length = 297
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPC-----NVT 75
K +V HG +S WR P LE G A D++G G SD +L P +
Sbjct: 26 GKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLV-ACDLIGMGASD--KLSPSGPDRYSYG 82
Query: 76 SKREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
+R+ + LW + ++LV G+A+ D+A H + V+ + F++A V
Sbjct: 83 EQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 134
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 21 SKTSPVVL-LHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSD-LERLPPCNVTSKR 78
S PVVL +HG L W+ L G A D+ G G S LE + + +
Sbjct: 23 SPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82
Query: 79 EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAE 129
++ + +P++LVG S+GA +A A P+ ++ L+ ++ + AE
Sbjct: 83 AQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAE 133
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 26 VVLLHGFDSSCLEW----RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHF 81
VVLLHG W R PL+E AG +D GWG SD N S+ +
Sbjct: 39 VVLLHGSGPGATGWANFSRNIDPLVE-AGYRVILLDCPGWGKSD----SVVNSGSRSDLN 93
Query: 82 YQLWKTYIKRPMI----LVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTG 132
++ K+ + + I L+G S+G +V F + PE V LV + GTG
Sbjct: 94 ARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGG-----GTG 143
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS---DLERLPPCNVTSKREHF 81
P++LLHG+ + L W P L E D+ G+G S D E R+
Sbjct: 33 PLLLLHGYPQTHLAWHRIAPRLAE-DYSVVLADLRGYGESRALDEEGADYSKAALARDQL 91
Query: 82 YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLV 120
+ + +R ++G GA V A++HP+AV V
Sbjct: 92 ETMGQLGFER-FAVIGHDRGARVGYRLALDHPQAVAAFV 129
>pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane
pdb|1G4H|A Chain A, Linb Complexed With Butan-1-Ol
pdb|1G42|A Chain A, Structure Of 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene
Hydrolase (Linb) From Sphingomonas Paucimobilis
Complexed With 1,2-Dichloropropane
Length = 296
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDLERLPPCN-----VTSK 77
P++ HG +S WR P AGL A D++G G SD +L P
Sbjct: 30 DPILFQHGNPTSSYLWRNIMPHC--AGLGRLIACDLIGMGDSD--KLDPSGPERYAYAEH 85
Query: 78 REHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
R++ LW+ + ++LV G+A+ D+A H E V+ + +++A
Sbjct: 86 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEA 133
>pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas
Paucimobilis Ut26 At Atomic Resolution
Length = 302
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDLERLPPCN-----VTSK 77
P++ HG +S WR P AGL A D++G G SD +L P
Sbjct: 30 DPILFQHGNPTSSYLWRNIMPHC--AGLGRLIACDLIGMGDSD--KLDPSGPERYAYAEH 85
Query: 78 REHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
R++ LW+ + ++LV G+A+ D+A H E V+ + +++A
Sbjct: 86 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEA 133
>pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.6 A Resolution
pdb|1D07|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 With 1,3-Propanediol, A Product Of
Debromidation Of Dibrompropane, At 2.0a Resolution
pdb|2BFN|A Chain A, The Crystal Structure Of The Complex Of The Haloalkane
Dehalogenase Linb With The Product Of Dehalogenation
Reaction 1,2-Dichloropropane
Length = 296
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDLERLPPCN-----VTSK 77
P++ HG +S WR P AGL A D++G G SD +L P
Sbjct: 30 DPILFQHGNPTSSYLWRNIMPHC--AGLGRLIACDLIGMGDSD--KLDPSGPERYAYAEH 85
Query: 78 REHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
R++ LW+ + ++LV G+A+ D+A H E V+ + +++A
Sbjct: 86 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEA 133
>pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At
1.6 A Resolution
pdb|1IZ8|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
With 1,3-Propanediol, A Product Of Debromidation Of
Dibrompropane, At 2.0a Resolution
pdb|1K5P|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.8a Resolution
pdb|1K63|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis With Ut26
2-Bromo-2-Propene-1-Ol At 1.8a Resolution
pdb|1K6E|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,2-Propanediol
(Product Of Dehalogenation Of 1,2-Dibromopropane) At
1.85a
Length = 295
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDLERLPPCN-----VTSK 77
P++ HG +S WR P AGL A D++G G SD +L P
Sbjct: 29 DPILFQHGNPTSSYLWRNIMPHC--AGLGRLIACDLIGMGDSD--KLDPSGPERYAYAEH 84
Query: 78 REHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
R++ LW+ + ++LV G+A+ D+A H E V+ + +++A
Sbjct: 85 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEA 132
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 28 LLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT 87
L HGF S WR P L +AG A+D+ G+G S PP E + T
Sbjct: 261 LCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSS---SPPEIEEYAMELLCKEMVT 317
Query: 88 YIKR----PMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTGNSAKLPSIIAY 143
++ + + +G + + A+ +PE V A + N+ +P
Sbjct: 318 FLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVR----------AVASLNTPFMPPDPDV 367
Query: 144 AGVYLLRSIPVRLY 157
+ + ++RSIPV Y
Sbjct: 368 SPMKVIRSIPVFNY 381
>pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3V|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3W|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3W|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3X|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R3X|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R40|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
pdb|3R40|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
Length = 306
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL----ERLPPCNVTSKREH 80
P++LLHGF + + W P L E + D+ G+G+SD+ E+ P + +
Sbjct: 35 PLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQ 93
Query: 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
+ + L G + GA V+ A++ P + L +D
Sbjct: 94 LIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL----ERLPPCNVTSKREH 80
P++LLHGF + + W P L E + D+ G+G+SD+ E+ P + +
Sbjct: 35 PLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQ 93
Query: 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
+ + L G GA V+ A++ P + L +D
Sbjct: 94 LIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL----ERLPPCNVTSKREH 80
P++LLHGF + + W P L E + D+ G+G+SD+ E+ P + +
Sbjct: 35 PLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQ 93
Query: 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
+ + L G GA V+ A++ P + L +D
Sbjct: 94 LIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 19 KPSKTSPVVLL--HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCN--- 73
KP+ T ++ HG + +L L +A D +G G S+ ER+ +
Sbjct: 54 KPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHV 113
Query: 74 -VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128
V +H + K Y P+ L+G S+G A+A+ A P +V I V A
Sbjct: 114 FVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 169
>pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
pdb|3R3Y|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
Length = 306
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL----ERLPPCNVTSKREH 80
P++LLHGF + + W P L E + D+ G+G+SD+ E+ P + +
Sbjct: 35 PLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQ 93
Query: 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
+ + L G GA V+ A++ P + L +D
Sbjct: 94 LIEAMEQLGHVHFALAGHXRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 19 KPSKTSPVVLL--HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCN--- 73
KP+ T ++ HG + +L L +A D +G G S+ ER+ +
Sbjct: 53 KPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHV 112
Query: 74 -VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128
V +H + K Y P+ L+G S+G A+A+ A P +V I V A
Sbjct: 113 FVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 168
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 18 LKPSKTSPVVLLHGFDSSCL---EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNV 74
L+ K PV+L+HG + WR P+L A+D+LG+G + P
Sbjct: 31 LEAGKGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKT---AKPDIEY 86
Query: 75 TSKRE--HFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125
T R H + K + +VG S+G A + +V H E V LV + ++
Sbjct: 87 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA 140
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 53 TWAVDILGWGFSDLERLPPCNVTSKR--EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110
T AVD G G SD P + + L +T + ILVG SLGA +V A
Sbjct: 97 TIAVDQRGHGLSDK---PETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAA 153
Query: 111 NHPEAVENLVFIDASVYAE 129
+P+ V ++V ID + Y E
Sbjct: 154 KYPDLVRSVVAIDFTPYIE 172
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 22 KTSPVVLLHGFD---SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTS-- 76
++ VVLLHG + WR P L E A D++G+G S+ P ++ S
Sbjct: 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWV 86
Query: 77 --KREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTGNS 134
+ E L + +VG S+G AV + V PE + + + SV A
Sbjct: 87 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALM-GSVGAPMNARP 145
Query: 135 AKLPSIIAY 143
+L ++A+
Sbjct: 146 PELARLLAF 154
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 30 HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCN----VTSKREHFYQLW 85
HG + +L L +A D +G G S+ ER+ + V +H +
Sbjct: 49 HGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ 108
Query: 86 KTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128
K Y P+ L+G S+G A+A+ A P +V I V A
Sbjct: 109 KDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 151
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
V L HGF S WR P L +AG A+D+ G+G S
Sbjct: 42 VCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGES 80
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole
Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole
Inhibitor
Length = 344
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
V L HGF S WR P L +AG A+D+ G+G S
Sbjct: 57 VCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGES 95
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
V L HGF S WR P L +AG A+D+ G+G S
Sbjct: 261 VCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGES 299
>pdb|2XMS|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
Length = 281
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 93 MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG---------TGNSAKLPSII 141
+I VG GA + +A+NHP+ VE LV I+ A+G TG ++ +P +I
Sbjct: 103 IIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMI 160
>pdb|2XMQ|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
pdb|2XMQ|B Chain B, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
pdb|2XMQ|C Chain C, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
Length = 281
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 93 MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG---------TGNSAKLPSII 141
+I VG GA + +A+NHP+ VE LV I+ A+G TG ++ +P +I
Sbjct: 103 IIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMI 160
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 1 MQVNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEE--AGLETWAVDI 58
+ F ++ +++S P P+VLLHG S W YP + + + T+AVDI
Sbjct: 50 ISTRFGQTHVIAS-----GPEDAPPLVLLHGALFSSTXW---YPNIADWSSKYRTYAVDI 101
Query: 59 LGWGFSDLERLPPCNVTSKREHF----YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE 114
+G D + P NV+ R + ++ +G SLG +F + PE
Sbjct: 102 IG----DKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHXIGLSLGGLHTXNFLLRXPE 157
Query: 115 AVE 117
V+
Sbjct: 158 RVK 160
>pdb|2XMR|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
pdb|2XMR|B Chain B, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
pdb|2XMR|C Chain C, Crystal Structure Of Human Ndrg2 Protein Provides Insight
Into Its Role As A Tumor Suppressor
Length = 281
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 93 MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG---------TGNSAKLPSII 141
+I VG GA + +A+NHP+ VE LV I+ A+G TG ++ +P +I
Sbjct: 103 IIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMI 160
>pdb|2QMQ|A Chain A, Crystal Structure Of A N-Myc Downstream Regulated 2
Protein (Ndrg2, Syld, Ndr2, Ai182517, Au040374) From Mus
Musculus At 1.70 A Resolution
Length = 286
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 93 MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG---------TGNSAKLPSII 141
+I VG GA + +A+NHP+ VE LV I+ A+G TG ++ +P +I
Sbjct: 113 IIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMI 170
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 19 KPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR 78
K + ++L HG + W T +L +AG AVD +G+ C +
Sbjct: 42 KKANGRTILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGF----------CKSSKPA 91
Query: 79 EHFYQLWKTYIKRPMIL----------VGPSLGAAVAVDFAVNHPEAVENLVFID 123
+ Y + +L +G S G +A +A+ +P VE LV ++
Sbjct: 92 HYQYSFQQLAANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLVLVN 146
>pdb|3P2M|A Chain A, Crystal Structure Of A Novel Esterase Rv0045c From
Mycobacterium Tuberculosis
Length = 330
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 10 IMSSVVKPLKPSKTSP-VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS---- 64
+ + + L+ ++P V+ LHG + W L E L AVD+ G G S
Sbjct: 67 VQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGEPAL---AVDLPGHGHSAWRE 123
Query: 65 DLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
D P N E + + +VG SLG A+ A P+ V LV +D
Sbjct: 124 DGNYSPQLN----SETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDV 179
Query: 125 SVYA 128
+ A
Sbjct: 180 TPSA 183
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PVVL+HG+ S W P L EAG D G+G S
Sbjct: 28 KPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKS 68
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial
Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial
Origin
Length = 309
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PV+ LHG +S WR P + AG A D++G G S
Sbjct: 30 QPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDS 70
>pdb|1R3D|A Chain A, Crystal Structure Of Protein Vc1974 From Vibrio Cholerae,
Pfam Abhydrolase
Length = 264
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 10 IMSSVVKPLKPSKTSP-VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER 68
++S+ + KP+ +P VVL+HG S +W+ L +D+ G G ++ ER
Sbjct: 2 LLSNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHG-TNPER 60
Query: 69 LPPC-NVTSKREHFYQLWKTYIKR--PMILVGPSLGA 102
C N E Q + ++ P+ILVG SLG
Sbjct: 61 --HCDNFAEAVEXIEQTVQAHVTSEVPVILVGYSLGG 95
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLW 85
+VLLHG+ + WRC L + VD+ G+G S ++ E Q
Sbjct: 16 LVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRS--RGFGALSLADXAEAVLQ-- 70
Query: 86 KTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125
I +G SLG VA A+ HPE V LV + +S
Sbjct: 71 --QAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASS 108
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 19 KPSKTSPVVLL--HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCN--- 73
KP+ T ++ HG + L L +A D +G G S+ ER +
Sbjct: 53 KPTGTPKALIFVSHGAGEHSGRYEELARXLXGLDLLVFAHDHVGHGQSEGERXVVSDFHV 112
Query: 74 -VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128
V +H K Y P+ L+G S G A+A+ A P V I V A
Sbjct: 113 FVRDVLQHVDSXQKDYPGLPVFLLGHSXGGAIAILTAAERPGHFAGXVLISPLVLA 168
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLW 85
+VLLHG+ + WRC L + VD+ G+G S ++ E Q
Sbjct: 16 LVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRS--RGFGALSLADMAEAVLQ-- 70
Query: 86 KTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125
I +G +LG VA A+ HPE V+ LV + +S
Sbjct: 71 --QAPDKAIWLGWALGGLVASQIALTHPERVQALVTVASS 108
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 14/105 (13%)
Query: 26 VVLLHGFDSSCLEW----RCTYPLLEEAGLETWAVDILGWGFSDLE----RLPPCNVTSK 77
VVLLHG W R L AVD G+G SD + +
Sbjct: 59 VVLLHGGGPGAASWTNFSRNIAVLARH--FHVLAVDQPGYGHSDKRAEHGQFNRYAAMAL 116
Query: 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFI 122
+ F QL + LVG SLG AV FA+++P LV +
Sbjct: 117 KGLFDQLGLGRVP----LVGNSLGGGTAVRFALDYPARAGRLVLM 157
>pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
pdb|3B12|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
Length = 304
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNV--------TSK 77
++LLHGF + W PLL D+ G+G S P + + +
Sbjct: 28 LLLLHGFPQNLHMWARVAPLLANE-YTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQ 86
Query: 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
RE L +T LVG + G A++HP++V +L +D
Sbjct: 87 RE----LMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLD 128
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR--EHFYQ 83
V+ LHG +S WR P +E D++G G S S R +H+
Sbjct: 46 VIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSG-----KSGNGSYRLLDHYKY 99
Query: 84 L--WKTYIKRP--MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
L W + P +I VG GAA+A +A H + ++ +V +++ V
Sbjct: 100 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 146
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR--EHFYQ 83
V+ LHG +S WR P +E D++G G S S R +H+
Sbjct: 47 VIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSG-----KSGNGSYRLLDHYKY 100
Query: 84 L--WKTYIKRP--MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
L W + P +I VG GAA+A +A H + ++ +V +++ V
Sbjct: 101 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 147
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR--EHFYQ 83
V+ LHG +S WR P +E D++G G S S R +H+
Sbjct: 47 VIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSG-----KSGNGSYRLLDHYKY 100
Query: 84 L--WKTYIKRP--MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
L W + P +I VG GAA+A +A H + ++ +V +++ V
Sbjct: 101 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 147
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR--EHFYQ 83
V+ LHG +S WR P +E D++G G S S R +H+
Sbjct: 46 VIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSG-----KSGNGSYRLLDHYKY 99
Query: 84 L--WKTYIKRP--MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
L W + P +I VG GAA+A +A H + ++ +V +++ V
Sbjct: 100 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 146
>pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
pdb|1Y37|B Chain B, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
Length = 304
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNV--------TSK 77
++LLHGF + W PLL D+ G+G S P + + +
Sbjct: 28 LLLLHGFPQNLHMWARVAPLLANE-YTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQ 86
Query: 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
RE L +T LVG G A++HP++V +L +D
Sbjct: 87 RE----LMRTLGFERFHLVGHDRGGRTGHRMALDHPDSVLSLAVLD 128
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG S+G A A++FA+ +P+ + L+ +
Sbjct: 108 LVGNSMGGATALNFALEYPDRIGKLILM 135
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG S+G A A++FA+ +P+ + L+ +
Sbjct: 108 LVGNSMGGATALNFALEYPDRIGKLILM 135
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PVVL+HGF S W L +AG D G+G S
Sbjct: 26 PVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS 65
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE---HFY 82
V+L+HGF + EW P L + A D+ G G S+ PP S + + +
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSE----PPKTGYSGEQVAVYLH 87
Query: 83 QLWKTYI-KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
+L + + RP LV +G V + + LV+++A +
Sbjct: 88 KLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPI 132
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE---HFY 82
V+L+HGF + EW P L + A D+ G G S+ PP S + + +
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSE----PPKTGYSGEQVAVYLH 87
Query: 83 QLWKTYI-KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
+L + + RP LV +G V + + LV+++A +
Sbjct: 88 KLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPI 132
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE---HFY 82
V+L+HGF + EW P L + A D+ G G S+ PP S + + +
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSE----PPKTGYSGEQVAVYLH 87
Query: 83 QLWKTYI-KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126
+L + + RP LV +G V + + LV+++A +
Sbjct: 88 KLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPI 132
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PVVL+HGF S W L +AG D G+G S
Sbjct: 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS 64
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PVVL+HGF S W L +AG D G+G S
Sbjct: 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS 64
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 24 SPVVLLHG--FDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHF 81
PV+ HG D+ E++ Y L G T A D G+G SD + + + +
Sbjct: 20 KPVLFSHGWLLDADMWEYQMEY--LSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDI 76
Query: 82 YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDA 124
QL + + + LVG S+G + H A V LV + A
Sbjct: 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 24 SPVVLLHG--FDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHF 81
PV+ HG D+ E++ Y L G T A D G+G SD + + + +
Sbjct: 20 KPVLFSHGWILDADMWEYQMEY--LSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDI 76
Query: 82 YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDA 124
QL + + + LVG S+G + H A V LV + A
Sbjct: 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 24 SPVVLLHG--FDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHF 81
PV+ HG D+ E++ Y L G T A D G+G SD + + + +
Sbjct: 20 KPVLFSHGWLLDADMWEYQMEY--LSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDI 76
Query: 82 YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDA 124
QL + + + LVG S+G + H A V LV + A
Sbjct: 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
PV+ HG+ W L G T A D G+G SD + + + + Q
Sbjct: 20 KPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDIAQ 78
Query: 84 LWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDA 124
L + + + LVG S+G + H A V LV + A
Sbjct: 79 LIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
PV+ HG+ W L G T A D G+G SD + + + + Q
Sbjct: 20 KPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDIAQ 78
Query: 84 LWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDA 124
L + + + LVG S+G + H A V LV + A
Sbjct: 79 LIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64
PVVL+HGF S W L +AG D G+G S
Sbjct: 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS 64
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG ++G A A++FA+ +P+ + L+ +
Sbjct: 108 LVGNAMGGATALNFALEYPDRIGKLILM 135
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG ++G A A++FA+ +P+ + L+ +
Sbjct: 108 LVGNAMGGATALNFALEYPDRIGKLILM 135
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG ++G A A++FA+ +P+ + L+ +
Sbjct: 105 LVGNAMGGATALNFALEYPDRIGKLILM 132
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 95 LVGPSLGAAVAVDFAVNHPEAVENLVFI 122
LVG ++G A A++FA+ +P+ + L+ +
Sbjct: 108 LVGNAMGGATALNFALEYPDRIGKLILM 135
>pdb|3DQZ|A Chain A, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|B Chain B, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|C Chain C, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|D Chain D, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
Length = 258
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 27 VLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWK 86
VL+H W PLLE AG AV++ G ++ P V + E+ L +
Sbjct: 8 VLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASG---IDPRPIQAVETVDEYSKPLIE 64
Query: 87 TYIKRP----MILVGPSLGA---AVAVDFAVNHPEAVENLVFIDA 124
T P +ILVG S G A+A D P ++ LVF++A
Sbjct: 65 TLKSLPENEEVILVGFSFGGINIALAADI---FPAKIKVLVFLNA 106
>pdb|3FLB|A Chain A, Rifr - Type Ii Thioesterase From Rifamycin NrpsPKS
Biosynthetic Pathway - Form 2
Length = 267
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 62 GFSDLERLPPCN-VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA 115
G D PP + + ++ + + RP+ L G ++GA + + A+ PEA
Sbjct: 56 GRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHAMGAIIGYELALRMPEA 110
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 26 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 75
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 76 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 123
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|3FLA|A Chain A, Rifr - Type Ii Thioesterase From Rifamycin NrpsPKS
BIOSYNTHETIC Pathway - Form 1
pdb|3FLA|B Chain B, Rifr - Type Ii Thioesterase From Rifamycin NrpsPKS
BIOSYNTHETIC Pathway - Form 1
Length = 267
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 62 GFSDLERLPPCN-VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA 115
G D PP + + ++ + + RP+ L G S GA + + A+ PEA
Sbjct: 56 GRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHSXGAIIGYELALRXPEA 110
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEAVGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|3QVM|A Chain A, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
pdb|3QVM|B Chain B, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
Length = 282
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLE 67
V+L HGF WR P LE+ D +G G SDLE
Sbjct: 31 VLLAHGFGCDQNXWRFXLPELEKQ-FTVIVFDYVGSGQSDLE 71
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 26 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 75
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 76 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 123
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79
P +PV+ LHG +S WR P + + A D++G G SD L +
Sbjct: 29 PRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPDLIGMGKSDKPDL---------D 78
Query: 80 HFYQLWKTYIK--------RPMILVGPSLGAAVAVDFAVNHPEAVENL 119
+F+ Y+ ++LV G+A+ +A +PE V+ +
Sbjct: 79 YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 8 SCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLE 67
+ I+S +K S + ++ GF W P EE D +G G SDL
Sbjct: 5 TSILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDL- 62
Query: 68 RLPPCNVTSKREHFYQ----LWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123
R N + + Q + + + + VG S+GA + + ++ PE +LV +
Sbjct: 63 RAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVG 122
Query: 124 AS 125
S
Sbjct: 123 PS 124
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 27 VLLHGFDSSCLE---WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
VL+HG CL W PLLE AG + AVD+ G + RL + + R++
Sbjct: 14 VLVHG---GCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINP-RRLD--EIHTFRDYSEP 67
Query: 84 LWKTYIKRP----MILVGPSLGAAVAVDFAVN-HPEAVENLVFIDA 124
L + P ++L+G S G +++ A+ +PE + VF+ A
Sbjct: 68 LMEVMASIPPDEKVVLLGHSFG-GMSLGLAMETYPEKISVAVFMSA 112
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 27 VLLHGFDSSCLE---WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
VL+HG CL W PLLE AG + AVD+ G + RL + + R++
Sbjct: 14 VLVHG---GCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINP-RRLD--EIHTFRDYSEP 67
Query: 84 LWKTYIKRP----MILVGPSLGAAVAVDFAVN-HPEAVENLVFIDA 124
L + P ++L+G S G +++ A+ +PE + VF+ A
Sbjct: 68 LMEVMASIPPDEKVVLLGHSFG-GMSLGLAMETYPEKISVAVFMSA 112
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 27 VLLHGFDSSCLE---WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
VL+HG CL W PLLE AG + AVD+ G + RL + + R++
Sbjct: 14 VLVHG---GCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINP-RRLD--EIHTFRDYSEP 67
Query: 84 LWKTYIKRP----MILVGPSLGAAVAVDFAVN-HPEAVENLVFIDA 124
L + P ++L+G S G +++ A+ +PE + VF+ A
Sbjct: 68 LMEVMASIPPDEKVVLLGHSFG-GMSLGLAMETYPEKISVAVFMSA 112
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 27 VLLHGFDSSCLE---WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83
VL+HG CL W PLLE AG + AVD+ G + RL + + R++
Sbjct: 8 VLVHG---GCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINP-RRLD--EIHTFRDYSEP 61
Query: 84 LWKTYIKRP----MILVGPSLGAAVAVDFAVN-HPEAVENLVFIDA 124
L + P ++L+G S G +++ A+ +PE + VF+ A
Sbjct: 62 LMEVMASIPPDEKVVLLGHSFG-GMSLGLAMETYPEKISVAVFMSA 106
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide
Hydrolase I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide
Hydrolase I (Steh1)
Length = 328
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWG 62
++ +HGF WR L E G A D+ G+G
Sbjct: 34 ILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYG 70
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWG 62
++ +HGF WR L E G A D+ G+G
Sbjct: 34 ILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYG 70
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
Length = 268
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 27 VLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQL-- 84
VL+HG W PLLE AG + A+D+ G +DL ++ + Y L
Sbjct: 8 VLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASG-TDLRKIEELRTL----YDYTLPL 62
Query: 85 ----WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
+ILVG SLG +P+ + VF+ A
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAA 106
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 27 VLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQL-- 84
VL+HG W PLLE AG + A+D+ G +DL ++ + Y L
Sbjct: 8 VLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASG-TDLRKIEELRTL----YDYTLPL 62
Query: 85 ----WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124
+ILVG SLG +P+ + VF+ A
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAA 106
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 19 KPSKTSPVVLL-HGFDSSCLEWRC-TYPLLEEAGLETWAVDILGWGFSDL---ERLPPCN 73
K PV+LL HG S L W T ++ A+D+ G + + E L
Sbjct: 33 KSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAET 92
Query: 74 VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFA 109
+ + + + P++L+G S+G A+AV A
Sbjct: 93 MAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTA 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,592,539
Number of Sequences: 62578
Number of extensions: 265351
Number of successful extensions: 670
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 91
length of query: 216
length of database: 14,973,337
effective HSP length: 95
effective length of query: 121
effective length of database: 9,028,427
effective search space: 1092439667
effective search space used: 1092439667
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)