Query 027952
Match_columns 216
No_of_seqs 123 out of 1612
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 04:00:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02240 PHA_depoly_arom poly 99.9 8.4E-26 1.8E-30 177.4 15.2 121 3-127 7-127 (276)
2 PLN02824 hydrolase, alpha/beta 99.9 2.9E-25 6.4E-30 175.8 17.7 104 22-126 28-137 (294)
3 PLN02385 hydrolase; alpha/beta 99.9 4.7E-25 1E-29 178.7 15.5 124 4-127 68-198 (349)
4 PRK03592 haloalkane dehalogena 99.9 1.4E-24 3E-29 172.1 16.2 115 5-126 14-128 (295)
5 PHA02857 monoglyceride lipase; 99.9 3.7E-24 8.1E-29 168.0 15.0 124 3-127 6-133 (276)
6 PLN02679 hydrolase, alpha/beta 99.9 1.2E-23 2.6E-28 171.0 17.7 105 22-127 87-192 (360)
7 PRK10673 acyl-CoA esterase; Pr 99.9 2.2E-23 4.7E-28 161.5 17.6 108 16-126 9-116 (255)
8 KOG1455 Lysophospholipase [Lip 99.9 8.7E-24 1.9E-28 161.2 14.4 210 3-216 33-252 (313)
9 PRK10349 carboxylesterase BioH 99.9 1.4E-23 3.1E-28 163.0 15.1 97 24-127 14-110 (256)
10 PLN02578 hydrolase 99.9 3.4E-23 7.3E-28 168.1 17.5 105 21-127 84-188 (354)
11 PRK11126 2-succinyl-6-hydroxy- 99.9 8.7E-24 1.9E-28 162.6 12.2 100 23-126 2-102 (242)
12 PLN02298 hydrolase, alpha/beta 99.9 2.9E-23 6.3E-28 167.0 15.7 123 5-127 40-170 (330)
13 PRK00870 haloalkane dehalogena 99.9 6.1E-23 1.3E-27 163.2 14.8 104 22-125 45-149 (302)
14 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.1E-22 2.5E-27 159.8 15.6 106 21-126 28-136 (282)
15 COG2267 PldB Lysophospholipase 99.9 9.4E-23 2E-27 161.0 14.7 126 3-129 15-145 (298)
16 PRK06489 hypothetical protein; 99.9 8.3E-23 1.8E-27 166.2 13.8 104 23-126 69-189 (360)
17 KOG4409 Predicted hydrolase/ac 99.9 5.4E-23 1.2E-27 159.7 11.7 124 6-131 74-200 (365)
18 TIGR03056 bchO_mg_che_rel puta 99.9 3.2E-22 6.8E-27 156.6 16.2 105 21-126 26-130 (278)
19 PLN03084 alpha/beta hydrolase 99.9 6.9E-22 1.5E-26 160.9 17.4 106 21-127 125-233 (383)
20 PLN02965 Probable pheophorbida 99.9 1.7E-22 3.7E-27 156.9 12.7 102 25-126 5-107 (255)
21 TIGR03611 RutD pyrimidine util 99.9 2.3E-22 5.1E-27 155.1 13.4 106 21-127 11-116 (257)
22 PF12697 Abhydrolase_6: Alpha/ 99.9 9.3E-23 2E-27 153.8 10.5 101 26-127 1-102 (228)
23 TIGR03695 menH_SHCHC 2-succiny 99.9 2.9E-22 6.3E-27 153.2 13.1 103 23-126 1-105 (251)
24 KOG4178 Soluble epoxide hydrol 99.9 3.2E-22 7E-27 154.7 11.8 109 19-127 40-149 (322)
25 TIGR01738 bioH putative pimelo 99.9 1.5E-21 3.2E-26 149.2 13.7 98 23-127 4-101 (245)
26 PLN03087 BODYGUARD 1 domain co 99.9 2.2E-21 4.8E-26 161.2 15.4 122 6-127 184-310 (481)
27 PLN02652 hydrolase; alpha/beta 99.9 2.5E-21 5.5E-26 158.4 15.3 120 6-126 119-245 (395)
28 PRK10749 lysophospholipase L2; 99.9 3.6E-21 7.8E-26 154.9 15.0 121 5-127 38-167 (330)
29 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.9E-21 4.1E-26 149.0 12.6 104 22-127 12-115 (251)
30 PRK03204 haloalkane dehalogena 99.9 4.1E-21 8.8E-26 151.6 13.7 105 21-126 32-136 (286)
31 PLN02894 hydrolase, alpha/beta 99.9 9.3E-21 2E-25 155.9 15.8 117 9-128 93-213 (402)
32 PLN02211 methyl indole-3-aceta 99.9 6E-21 1.3E-25 149.6 13.8 106 21-126 16-122 (273)
33 TIGR01250 pro_imino_pep_2 prol 99.9 2E-20 4.3E-25 146.4 16.8 120 5-126 9-131 (288)
34 PRK07581 hypothetical protein; 99.9 7.2E-21 1.6E-25 153.7 14.2 122 6-127 24-160 (339)
35 TIGR03101 hydr2_PEP hydrolase, 99.9 2E-20 4.3E-25 145.0 15.0 123 4-127 6-135 (266)
36 PRK14875 acetoin dehydrogenase 99.8 3E-20 6.5E-25 151.6 15.4 106 20-127 128-233 (371)
37 COG1647 Esterase/lipase [Gener 99.8 1.3E-20 2.9E-25 137.5 10.7 105 21-128 13-120 (243)
38 PLN02980 2-oxoglutarate decarb 99.8 1.6E-20 3.6E-25 175.6 14.2 104 22-126 1370-1480(1655)
39 PLN02511 hydrolase 99.8 1.8E-20 4E-25 153.6 11.7 120 6-126 80-210 (388)
40 KOG1454 Predicted hydrolase/ac 99.8 2.1E-20 4.5E-25 149.2 9.4 108 21-128 56-168 (326)
41 TIGR01392 homoserO_Ac_trn homo 99.8 2.9E-19 6.3E-24 145.0 12.7 123 6-128 14-164 (351)
42 PRK10985 putative hydrolase; P 99.8 4E-19 8.6E-24 142.6 12.5 122 6-127 40-169 (324)
43 PRK08775 homoserine O-acetyltr 99.8 3.8E-19 8.3E-24 143.8 12.1 115 6-127 44-174 (343)
44 TIGR01249 pro_imino_pep_1 prol 99.8 2E-18 4.4E-23 137.5 12.9 118 6-127 13-131 (306)
45 PRK00175 metX homoserine O-ace 99.8 1.9E-18 4.1E-23 141.5 12.9 122 6-127 31-183 (379)
46 TIGR01607 PST-A Plasmodium sub 99.8 3.9E-18 8.4E-23 137.2 13.2 122 4-127 4-186 (332)
47 KOG2984 Predicted hydrolase [G 99.8 5.6E-19 1.2E-23 127.3 4.4 178 21-216 40-222 (277)
48 PRK05077 frsA fermentation/res 99.8 1.9E-17 4.1E-22 136.6 13.8 124 2-126 172-300 (414)
49 KOG2564 Predicted acetyltransf 99.7 1.1E-16 2.4E-21 120.9 12.0 105 20-125 71-181 (343)
50 PRK05855 short chain dehydroge 99.7 6E-17 1.3E-21 139.4 12.1 117 4-124 9-129 (582)
51 TIGR03100 hydr1_PEP hydrolase, 99.7 4.5E-16 9.7E-21 122.1 14.2 119 4-127 8-135 (274)
52 PRK06765 homoserine O-acetyltr 99.7 3.5E-16 7.7E-21 127.8 14.0 121 8-128 41-198 (389)
53 COG0429 Predicted hydrolase of 99.7 3.5E-16 7.7E-21 121.3 12.7 123 6-128 58-187 (345)
54 PRK13604 luxD acyl transferase 99.7 5.3E-16 1.2E-20 121.4 13.8 119 6-127 18-142 (307)
55 TIGR01838 PHA_synth_I poly(R)- 99.7 1.7E-15 3.6E-20 127.5 15.4 118 13-130 177-306 (532)
56 KOG1838 Alpha/beta hydrolase [ 99.7 3.9E-15 8.5E-20 119.3 14.0 122 5-126 101-235 (409)
57 TIGR03230 lipo_lipase lipoprot 99.6 5.2E-15 1.1E-19 121.4 13.8 104 22-126 40-154 (442)
58 PRK11071 esterase YqiA; Provis 99.6 3.3E-15 7.1E-20 110.9 10.6 89 24-127 2-94 (190)
59 PRK10566 esterase; Provisional 99.6 5.5E-15 1.2E-19 114.3 11.7 103 21-124 25-140 (249)
60 PLN00021 chlorophyllase 99.6 5E-15 1.1E-19 117.7 11.5 117 9-126 38-166 (313)
61 PF12146 Hydrolase_4: Putative 99.6 2.6E-15 5.6E-20 95.0 7.9 79 7-86 1-79 (79)
62 KOG2382 Predicted alpha/beta h 99.6 1.2E-14 2.6E-19 112.9 11.4 109 17-127 46-160 (315)
63 TIGR01836 PHA_synth_III_C poly 99.6 8.3E-15 1.8E-19 118.9 10.7 104 21-128 60-173 (350)
64 PRK07868 acyl-CoA synthetase; 99.6 6E-14 1.3E-18 127.5 16.7 104 21-127 65-178 (994)
65 PLN02872 triacylglycerol lipas 99.6 6.7E-15 1.4E-19 120.4 8.8 126 4-130 50-201 (395)
66 cd00707 Pancreat_lipase_like P 99.6 1.4E-14 3E-19 113.5 10.1 106 21-127 34-148 (275)
67 PF00561 Abhydrolase_1: alpha/ 99.6 1.5E-14 3.3E-19 109.7 8.9 75 51-125 1-78 (230)
68 PF12695 Abhydrolase_5: Alpha/ 99.6 6.3E-14 1.4E-18 99.2 10.9 92 25-124 1-93 (145)
69 PF06500 DUF1100: Alpha/beta h 99.5 5E-14 1.1E-18 113.7 10.5 124 2-126 169-296 (411)
70 TIGR00976 /NonD putative hydro 99.5 5.8E-14 1.3E-18 120.2 11.4 120 5-126 4-132 (550)
71 PF03096 Ndr: Ndr family; Int 99.5 2.8E-14 6E-19 109.8 8.3 123 5-129 6-137 (283)
72 TIGR02821 fghA_ester_D S-formy 99.5 3.7E-13 8.1E-18 105.7 14.2 123 5-127 22-174 (275)
73 TIGR01840 esterase_phb esteras 99.5 2.3E-13 5E-18 102.9 12.4 114 14-127 3-131 (212)
74 PF06342 DUF1057: Alpha/beta h 99.5 9E-13 2E-17 100.6 14.9 106 24-131 36-142 (297)
75 COG0596 MhpC Predicted hydrola 99.5 4.2E-13 9E-18 102.5 13.2 102 23-127 21-124 (282)
76 KOG2931 Differentiation-relate 99.5 9.1E-13 2E-17 100.5 13.7 110 20-130 43-161 (326)
77 TIGR03502 lipase_Pla1_cef extr 99.5 5E-13 1.1E-17 116.2 12.9 90 23-112 449-576 (792)
78 PLN02442 S-formylglutathione h 99.4 4.6E-12 9.9E-17 99.9 12.7 121 7-127 29-179 (283)
79 PRK10162 acetyl esterase; Prov 99.4 6.1E-12 1.3E-16 100.8 11.9 122 4-127 63-196 (318)
80 COG2021 MET2 Homoserine acetyl 99.4 4.4E-12 9.6E-17 100.2 10.4 122 7-128 35-184 (368)
81 PRK11460 putative hydrolase; P 99.3 1.5E-11 3.3E-16 94.2 11.4 106 20-125 13-137 (232)
82 PF00975 Thioesterase: Thioest 99.3 1.2E-11 2.7E-16 94.3 10.7 100 24-126 1-104 (229)
83 TIGR01839 PHA_synth_II poly(R) 99.3 8.8E-11 1.9E-15 98.6 16.3 113 13-129 204-331 (560)
84 KOG1552 Predicted alpha/beta h 99.3 4E-11 8.7E-16 90.5 12.1 118 5-126 43-163 (258)
85 PF07819 PGAP1: PGAP1-like pro 99.3 3.1E-11 6.7E-16 91.8 11.4 104 22-129 3-126 (225)
86 PF12740 Chlorophyllase2: Chlo 99.3 4.1E-11 8.8E-16 91.6 9.3 113 13-126 7-131 (259)
87 COG0412 Dienelactone hydrolase 99.2 4.1E-10 8.9E-15 86.3 13.3 126 2-128 6-148 (236)
88 PF10230 DUF2305: Uncharacteri 99.2 3.9E-10 8.5E-15 88.0 12.0 106 23-128 2-124 (266)
89 COG3319 Thioesterase domains o 99.2 4.1E-10 8.9E-15 86.6 10.5 100 24-127 1-104 (257)
90 PRK10252 entF enterobactin syn 99.2 3.2E-10 6.8E-15 106.3 11.7 102 21-126 1066-1171(1296)
91 PF05448 AXE1: Acetyl xylan es 99.1 1.4E-09 3E-14 86.9 13.3 120 5-126 64-209 (320)
92 KOG4667 Predicted esterase [Li 99.1 5.4E-10 1.2E-14 82.0 9.7 104 21-126 31-139 (269)
93 COG2945 Predicted hydrolase of 99.1 1.2E-09 2.6E-14 78.8 10.5 107 20-127 25-138 (210)
94 KOG4391 Predicted alpha/beta h 99.1 1.4E-10 3E-15 85.2 5.8 107 19-126 74-184 (300)
95 PF02129 Peptidase_S15: X-Pro 99.1 9.1E-10 2E-14 86.4 10.7 119 6-126 1-136 (272)
96 PF01738 DLH: Dienelactone hyd 99.1 1.5E-09 3.3E-14 82.3 10.9 112 12-124 3-130 (218)
97 PLN02733 phosphatidylcholine-s 99.1 3.8E-10 8.3E-15 93.4 7.5 93 34-127 105-202 (440)
98 KOG2565 Predicted hydrolases o 99.1 1.4E-09 3E-14 85.9 9.5 124 3-126 129-264 (469)
99 PF07224 Chlorophyllase: Chlor 99.0 1.4E-09 2.9E-14 82.3 8.7 114 13-127 36-158 (307)
100 COG3458 Acetyl esterase (deace 99.0 1.2E-09 2.7E-14 82.8 7.6 122 3-126 62-210 (321)
101 KOG2624 Triglyceride lipase-ch 99.0 1.5E-09 3.2E-14 88.5 8.5 127 3-129 53-202 (403)
102 PF06821 Ser_hydrolase: Serine 99.0 2.3E-09 5E-14 78.1 8.4 89 26-127 1-92 (171)
103 PF02230 Abhydrolase_2: Phosph 99.0 1.8E-09 3.9E-14 81.8 7.9 109 19-127 10-141 (216)
104 COG3208 GrsT Predicted thioest 99.0 2.6E-09 5.5E-14 80.3 8.3 105 20-126 4-112 (244)
105 PF08538 DUF1749: Protein of u 99.0 1.1E-08 2.4E-13 79.9 12.1 106 22-131 32-153 (303)
106 PRK10115 protease 2; Provision 99.0 7.8E-09 1.7E-13 90.7 12.4 124 5-128 424-561 (686)
107 PF05728 UPF0227: Uncharacteri 99.0 8.3E-09 1.8E-13 76.1 10.6 88 25-127 1-92 (187)
108 PF06028 DUF915: Alpha/beta hy 99.0 5.7E-09 1.2E-13 80.5 9.9 108 21-128 9-145 (255)
109 PF12715 Abhydrolase_7: Abhydr 99.0 9.8E-09 2.1E-13 82.2 10.9 120 6-126 97-260 (390)
110 PF01674 Lipase_2: Lipase (cla 98.9 1.8E-09 4E-14 81.3 6.1 86 24-111 2-95 (219)
111 COG1506 DAP2 Dipeptidyl aminop 98.9 1.1E-08 2.3E-13 89.1 11.3 119 6-126 374-507 (620)
112 PF00326 Peptidase_S9: Prolyl 98.9 3.6E-09 7.8E-14 79.9 7.0 89 39-127 3-100 (213)
113 COG0400 Predicted esterase [Ge 98.9 7.6E-09 1.7E-13 77.3 8.3 110 20-130 15-138 (207)
114 PF10503 Esterase_phd: Esteras 98.9 2.6E-08 5.6E-13 75.2 11.2 116 12-127 3-133 (220)
115 COG4757 Predicted alpha/beta h 98.9 9.8E-09 2.1E-13 76.3 8.4 117 6-124 13-136 (281)
116 COG2936 Predicted acyl esteras 98.9 2.7E-08 5.8E-13 83.6 11.6 122 6-127 28-160 (563)
117 KOG1553 Predicted alpha/beta h 98.9 1.9E-08 4E-13 79.0 9.5 115 6-124 223-343 (517)
118 PF07859 Abhydrolase_3: alpha/ 98.8 1E-08 2.2E-13 77.2 7.3 94 26-127 1-111 (211)
119 PF05990 DUF900: Alpha/beta hy 98.8 5.8E-08 1.3E-12 74.3 10.4 108 20-127 15-138 (233)
120 TIGR01849 PHB_depoly_PhaZ poly 98.8 8.5E-08 1.9E-12 78.5 11.9 103 24-129 103-211 (406)
121 PF00151 Lipase: Lipase; Inte 98.8 4.5E-09 9.8E-14 84.3 3.8 106 21-127 69-188 (331)
122 COG3509 LpqC Poly(3-hydroxybut 98.8 1.4E-07 3.1E-12 72.8 11.4 123 4-126 41-179 (312)
123 COG0657 Aes Esterase/lipase [L 98.8 1.1E-07 2.4E-12 76.0 11.5 117 9-129 63-194 (312)
124 smart00824 PKS_TE Thioesterase 98.7 1.8E-07 3.9E-12 69.8 10.4 95 28-126 2-102 (212)
125 COG3571 Predicted hydrolase of 98.7 4.6E-07 1E-11 63.8 11.3 108 23-130 14-128 (213)
126 PF02273 Acyl_transf_2: Acyl t 98.7 5.3E-07 1.2E-11 67.8 11.1 116 8-126 13-134 (294)
127 COG1075 LipA Predicted acetylt 98.7 1.2E-07 2.6E-12 76.5 8.2 103 22-127 58-165 (336)
128 PF03403 PAF-AH_p_II: Platelet 98.6 1.1E-07 2.4E-12 77.8 7.5 106 21-127 98-263 (379)
129 COG3545 Predicted esterase of 98.6 6.5E-07 1.4E-11 64.1 9.9 92 23-127 2-95 (181)
130 PF06057 VirJ: Bacterial virul 98.6 3.8E-07 8.2E-12 66.5 8.5 97 25-127 4-108 (192)
131 COG4814 Uncharacterized protei 98.5 9.9E-07 2.1E-11 66.6 9.6 105 23-127 45-177 (288)
132 PF00756 Esterase: Putative es 98.5 3.5E-07 7.7E-12 70.7 7.6 118 9-126 7-150 (251)
133 PF05057 DUF676: Putative seri 98.5 3.4E-07 7.3E-12 69.5 6.5 87 22-110 3-97 (217)
134 KOG4627 Kynurenine formamidase 98.5 3.9E-07 8.5E-12 66.7 6.1 114 9-127 55-173 (270)
135 KOG1515 Arylacetamide deacetyl 98.5 3.7E-06 8.1E-11 67.4 12.3 121 6-130 70-211 (336)
136 COG4099 Predicted peptidase [G 98.5 1.2E-06 2.6E-11 67.7 8.8 117 5-127 169-305 (387)
137 PRK10439 enterobactin/ferric e 98.5 3.8E-06 8.2E-11 69.6 12.2 104 21-126 207-323 (411)
138 PTZ00472 serine carboxypeptida 98.5 3.2E-06 7E-11 71.1 12.0 119 7-126 60-216 (462)
139 PF05677 DUF818: Chlamydia CHL 98.5 5.4E-06 1.2E-10 65.6 12.2 117 4-124 118-252 (365)
140 COG3243 PhaC Poly(3-hydroxyalk 98.4 6.1E-07 1.3E-11 72.5 7.0 105 22-130 106-221 (445)
141 PF12048 DUF3530: Protein of u 98.4 1.3E-05 2.8E-10 64.0 13.9 120 7-126 70-229 (310)
142 cd00312 Esterase_lipase Estera 98.4 2.6E-06 5.6E-11 72.5 10.5 121 5-127 74-214 (493)
143 PRK04940 hypothetical protein; 98.4 3.3E-06 7.2E-11 61.4 9.2 86 25-128 1-94 (180)
144 COG4188 Predicted dienelactone 98.4 1.7E-06 3.6E-11 69.1 7.6 91 22-112 70-180 (365)
145 COG3150 Predicted esterase [Ge 98.4 3.3E-06 7.2E-11 59.9 8.0 90 26-127 2-92 (191)
146 KOG3975 Uncharacterized conser 98.3 1.9E-05 4.1E-10 59.7 12.4 107 20-126 26-147 (301)
147 PF09752 DUF2048: Uncharacteri 98.3 1.1E-05 2.4E-10 64.3 11.7 119 6-124 73-208 (348)
148 KOG3847 Phospholipase A2 (plat 98.3 1.2E-06 2.6E-11 68.1 5.8 120 7-127 100-276 (399)
149 PRK05371 x-prolyl-dipeptidyl a 98.3 5.2E-06 1.1E-10 73.9 10.0 83 42-126 271-373 (767)
150 PF05577 Peptidase_S28: Serine 98.3 1.6E-05 3.5E-10 66.6 12.1 104 23-127 29-149 (434)
151 COG4782 Uncharacterized protei 98.3 5.5E-06 1.2E-10 65.9 8.6 106 21-126 114-234 (377)
152 COG2272 PnbA Carboxylesterase 98.3 7.9E-06 1.7E-10 67.6 9.7 124 4-127 74-218 (491)
153 KOG3101 Esterase D [General fu 98.3 2.5E-06 5.4E-11 62.8 6.0 125 6-130 25-180 (283)
154 KOG2281 Dipeptidyl aminopeptid 98.2 1.1E-05 2.4E-10 68.3 9.7 121 5-125 621-761 (867)
155 KOG3724 Negative regulator of 98.2 1.5E-05 3.2E-10 69.0 10.1 105 22-130 88-224 (973)
156 PF02450 LCAT: Lecithin:choles 98.2 8.1E-06 1.7E-10 67.3 8.4 81 38-127 66-161 (389)
157 PF10340 DUF2424: Protein of u 98.2 3.4E-05 7.3E-10 62.5 11.2 107 21-129 120-238 (374)
158 PLN02606 palmitoyl-protein thi 98.1 7.8E-05 1.7E-09 58.5 11.3 102 22-127 25-133 (306)
159 KOG2112 Lysophospholipase [Lip 98.0 4.3E-05 9.4E-10 56.3 7.9 104 23-126 3-128 (206)
160 PF00135 COesterase: Carboxyle 98.0 4.7E-05 1E-09 65.2 9.1 122 6-127 105-246 (535)
161 PF03959 FSH1: Serine hydrolas 97.9 6.9E-05 1.5E-09 56.6 8.0 105 22-127 3-146 (212)
162 COG0627 Predicted esterase [Ge 97.9 8.6E-05 1.9E-09 59.2 8.4 107 22-128 53-189 (316)
163 KOG2100 Dipeptidyl aminopeptid 97.9 0.00013 2.7E-09 65.1 10.2 120 6-127 506-645 (755)
164 PLN02633 palmitoyl protein thi 97.8 0.00034 7.3E-09 55.1 10.9 103 21-127 23-132 (314)
165 PF02089 Palm_thioest: Palmito 97.8 3.4E-05 7.4E-10 59.9 4.4 106 21-127 3-117 (279)
166 COG2819 Predicted hydrolase of 97.7 0.0012 2.6E-08 50.8 12.2 54 75-128 114-174 (264)
167 PF00450 Peptidase_S10: Serine 97.6 0.00093 2E-08 55.5 11.6 120 6-126 22-181 (415)
168 PLN02517 phosphatidylcholine-s 97.6 0.00019 4.2E-09 61.0 6.7 87 38-126 157-263 (642)
169 KOG2541 Palmitoyl protein thio 97.5 0.0015 3.3E-08 50.2 10.1 99 24-126 24-128 (296)
170 KOG4840 Predicted hydrolases o 97.5 0.00032 6.9E-09 52.4 6.3 104 22-129 35-147 (299)
171 KOG3043 Predicted hydrolase re 97.5 0.00022 4.8E-09 53.2 5.4 101 24-126 40-154 (242)
172 KOG2182 Hydrolytic enzymes of 97.5 0.0014 3E-08 54.5 10.3 108 20-127 83-208 (514)
173 PF11339 DUF3141: Protein of u 97.5 0.0022 4.8E-08 53.8 11.3 98 21-126 66-175 (581)
174 KOG2183 Prolylcarboxypeptidase 97.5 0.00095 2.1E-08 54.3 8.6 103 24-126 81-202 (492)
175 cd00741 Lipase Lipase. Lipase 97.4 0.00042 9E-09 49.5 5.9 39 89-127 26-68 (153)
176 PF11187 DUF2974: Protein of u 97.4 0.00052 1.1E-08 52.2 6.2 55 75-130 69-127 (224)
177 KOG3967 Uncharacterized conser 97.3 0.0026 5.6E-08 47.3 9.0 103 22-126 100-227 (297)
178 KOG2237 Predicted serine prote 97.3 0.00042 9E-09 59.1 5.4 137 6-142 450-600 (712)
179 PF08840 BAAT_C: BAAT / Acyl-C 97.3 0.00069 1.5E-08 51.2 6.1 50 77-127 5-57 (213)
180 PF07082 DUF1350: Protein of u 97.3 0.0048 1.1E-07 47.1 10.1 82 38-126 35-125 (250)
181 PF01764 Lipase_3: Lipase (cla 97.2 0.00094 2E-08 46.7 5.3 37 76-112 49-85 (140)
182 KOG2551 Phospholipase/carboxyh 97.1 0.0072 1.6E-07 45.3 8.9 102 22-126 4-147 (230)
183 PF03583 LIP: Secretory lipase 97.0 0.0017 3.7E-08 51.5 6.0 86 41-126 17-113 (290)
184 COG3946 VirJ Type IV secretory 97.0 0.0074 1.6E-07 49.1 9.0 83 25-113 262-348 (456)
185 COG2939 Carboxypeptidase C (ca 96.9 0.011 2.4E-07 49.6 9.5 113 17-130 95-240 (498)
186 PF11144 DUF2920: Protein of u 96.8 0.025 5.4E-07 46.4 11.2 36 92-127 185-220 (403)
187 PF06259 Abhydrolase_8: Alpha/ 96.8 0.0053 1.1E-07 44.9 6.5 54 74-127 87-145 (177)
188 COG2382 Fes Enterochelin ester 96.8 0.0059 1.3E-07 47.9 6.9 37 91-127 177-213 (299)
189 cd00519 Lipase_3 Lipase (class 96.8 0.0028 6.1E-08 48.4 5.0 24 89-112 126-149 (229)
190 COG1505 Serine proteases of th 96.7 0.00099 2.1E-08 56.6 2.4 122 3-127 400-536 (648)
191 PLN02209 serine carboxypeptida 96.7 0.027 5.8E-07 47.3 10.4 118 8-126 52-212 (437)
192 PLN02162 triacylglycerol lipas 96.6 0.0072 1.6E-07 50.4 6.4 35 76-110 263-297 (475)
193 KOG2369 Lecithin:cholesterol a 96.5 0.0046 9.9E-08 51.3 4.9 83 38-126 125-225 (473)
194 PLN00413 triacylglycerol lipas 96.5 0.0093 2E-07 49.8 6.4 35 76-110 269-303 (479)
195 KOG1202 Animal-type fatty acid 96.5 0.018 3.9E-07 53.1 8.5 95 21-126 2121-2219(2376)
196 COG1770 PtrB Protease II [Amin 96.4 0.038 8.3E-07 47.8 9.9 123 6-128 428-564 (682)
197 PF01083 Cutinase: Cutinase; 96.4 0.011 2.4E-07 43.4 6.0 101 26-129 8-125 (179)
198 PLN03016 sinapoylglucose-malat 96.4 0.039 8.4E-07 46.3 9.9 118 8-126 50-210 (433)
199 PF04083 Abhydro_lipase: Parti 96.2 0.0066 1.4E-07 36.3 3.2 37 3-39 17-59 (63)
200 PLN02454 triacylglycerol lipas 96.1 0.01 2.3E-07 48.9 5.0 32 80-111 215-248 (414)
201 PLN02571 triacylglycerol lipas 96.1 0.01 2.3E-07 48.9 4.8 37 75-111 208-246 (413)
202 KOG1516 Carboxylesterase and r 95.9 0.043 9.3E-07 47.5 8.3 124 5-128 92-234 (545)
203 PF05277 DUF726: Protein of un 95.9 0.026 5.5E-07 45.7 6.3 49 80-128 207-262 (345)
204 PF11288 DUF3089: Protein of u 95.9 0.02 4.4E-07 42.8 5.2 68 44-112 40-116 (207)
205 PLN02408 phospholipase A1 95.8 0.017 3.8E-07 46.9 4.8 36 77-112 184-221 (365)
206 PLN02934 triacylglycerol lipas 95.6 0.021 4.5E-07 48.2 4.8 35 76-110 306-340 (515)
207 PF04301 DUF452: Protein of un 95.4 0.084 1.8E-06 39.8 7.0 81 22-127 10-91 (213)
208 PLN02324 triacylglycerol lipas 95.4 0.03 6.5E-07 46.2 4.8 35 77-111 199-235 (415)
209 KOG4372 Predicted alpha/beta h 95.3 0.023 5.1E-07 46.3 3.9 89 21-110 78-169 (405)
210 PLN02310 triacylglycerol lipas 95.2 0.062 1.3E-06 44.4 6.2 36 76-111 190-229 (405)
211 PF07519 Tannase: Tannase and 95.0 0.32 6.9E-06 41.5 10.2 114 9-127 16-151 (474)
212 PLN02802 triacylglycerol lipas 95.0 0.042 9.1E-07 46.4 4.7 36 77-112 314-351 (509)
213 KOG1282 Serine carboxypeptidas 94.8 0.22 4.7E-06 42.0 8.5 123 2-126 50-213 (454)
214 COG4947 Uncharacterized protei 94.8 0.07 1.5E-06 38.5 4.8 102 22-126 25-136 (227)
215 PF05576 Peptidase_S37: PS-10 94.7 0.1 2.2E-06 43.0 6.0 104 21-126 61-169 (448)
216 PLN02213 sinapoylglucose-malat 94.7 0.15 3.2E-06 41.1 7.1 76 51-126 2-96 (319)
217 PLN02753 triacylglycerol lipas 94.6 0.06 1.3E-06 45.7 4.6 35 77-111 293-332 (531)
218 PLN02719 triacylglycerol lipas 94.5 0.062 1.3E-06 45.5 4.6 35 77-111 279-318 (518)
219 PLN02761 lipase class 3 family 94.5 0.064 1.4E-06 45.5 4.7 36 76-111 273-314 (527)
220 PLN03037 lipase class 3 family 94.4 0.071 1.5E-06 45.2 4.6 35 77-111 300-338 (525)
221 TIGR03712 acc_sec_asp2 accesso 94.3 0.23 4.9E-06 41.8 7.3 115 6-127 274-391 (511)
222 KOG4388 Hormone-sensitive lipa 94.3 0.4 8.6E-06 41.4 8.8 106 19-128 392-510 (880)
223 COG4553 DepA Poly-beta-hydroxy 94.2 0.76 1.6E-05 36.3 9.5 103 22-127 102-210 (415)
224 PF08237 PE-PPE: PE-PPE domain 93.8 0.36 7.9E-06 36.8 7.2 77 50-126 2-89 (225)
225 KOG4569 Predicted lipase [Lipi 93.6 0.12 2.7E-06 41.9 4.6 37 75-111 155-191 (336)
226 PF06441 EHN: Epoxide hydrolas 93.5 0.09 1.9E-06 35.4 3.0 39 3-42 73-111 (112)
227 PLN02847 triacylglycerol lipas 93.3 0.15 3.4E-06 44.0 4.8 23 89-111 249-271 (633)
228 PF09949 DUF2183: Uncharacteri 92.7 1.9 4.1E-05 28.4 8.3 84 38-121 12-97 (100)
229 KOG1551 Uncharacterized conser 92.2 0.46 9.9E-06 37.0 5.5 99 24-123 114-227 (371)
230 KOG4540 Putative lipase essent 91.7 0.43 9.2E-06 37.5 5.0 42 81-124 266-307 (425)
231 COG5153 CVT17 Putative lipase 91.7 0.43 9.2E-06 37.5 5.0 42 81-124 266-307 (425)
232 KOG3253 Predicted alpha/beta h 91.4 0.31 6.8E-06 42.1 4.3 97 23-126 176-286 (784)
233 cd01714 ETF_beta The electron 89.3 2.6 5.5E-05 31.6 7.3 72 42-122 68-145 (202)
234 KOG2385 Uncharacterized conser 88.9 1.1 2.5E-05 38.0 5.5 41 89-129 445-490 (633)
235 KOG1283 Serine carboxypeptidas 87.9 3.9 8.5E-05 32.9 7.6 104 21-126 29-166 (414)
236 PF05705 DUF829: Eukaryotic pr 87.6 7.8 0.00017 29.6 9.3 99 25-127 1-113 (240)
237 PRK12467 peptide synthase; Pro 85.2 4.5 9.8E-05 43.7 8.6 98 23-124 3692-3793(3956)
238 KOG2029 Uncharacterized conser 84.7 2 4.4E-05 37.3 4.9 39 89-127 524-573 (697)
239 KOG4389 Acetylcholinesterase/B 84.1 4.6 0.0001 34.4 6.6 124 2-127 113-256 (601)
240 COG1073 Hydrolases of the alph 84.0 5.6 0.00012 30.7 7.1 119 8-126 31-169 (299)
241 PF06309 Torsin: Torsin; Inte 84.0 12 0.00025 25.9 7.7 63 20-88 49-116 (127)
242 COG0529 CysC Adenylylsulfate k 77.5 26 0.00057 25.9 8.1 59 21-82 20-82 (197)
243 COG2830 Uncharacterized protei 71.2 9.6 0.00021 27.5 4.2 80 23-127 11-91 (214)
244 PF00448 SRP54: SRP54-type pro 70.6 33 0.00072 25.5 7.4 73 41-122 74-148 (196)
245 PF10081 Abhydrolase_9: Alpha/ 67.2 13 0.00028 29.4 4.6 39 90-128 108-149 (289)
246 COG1448 TyrB Aspartate/tyrosin 67.1 51 0.0011 27.4 8.1 87 23-125 171-264 (396)
247 cd07207 Pat_ExoU_VipD_like Exo 66.3 10 0.00023 27.8 4.0 27 87-113 23-49 (194)
248 cd07198 Patatin Patatin-like p 66.3 11 0.00025 27.1 4.1 34 79-113 15-48 (172)
249 cd07225 Pat_PNPLA6_PNPLA7 Pata 66.3 10 0.00022 30.5 4.1 63 37-112 2-64 (306)
250 COG0541 Ffh Signal recognition 65.2 44 0.00096 28.3 7.6 70 44-122 176-247 (451)
251 PF10142 PhoPQ_related: PhoPQ- 63.8 34 0.00073 28.3 6.7 44 80-124 158-204 (367)
252 KOG2521 Uncharacterized conser 63.7 49 0.0011 27.2 7.5 106 22-127 37-153 (350)
253 PF01012 ETF: Electron transfe 62.5 53 0.0012 23.3 7.0 62 42-112 50-113 (164)
254 PRK10279 hypothetical protein; 61.9 13 0.00028 29.8 3.9 34 79-113 22-55 (300)
255 cd07210 Pat_hypo_W_succinogene 61.9 15 0.00033 27.8 4.2 26 88-113 25-50 (221)
256 cd07227 Pat_Fungal_NTE1 Fungal 61.3 14 0.00031 29.0 4.0 33 79-112 27-59 (269)
257 PF09994 DUF2235: Uncharacteri 60.7 82 0.0018 24.8 8.4 88 24-111 2-112 (277)
258 TIGR03131 malonate_mdcH malona 59.5 14 0.00029 29.3 3.7 30 81-110 66-95 (295)
259 smart00827 PKS_AT Acyl transfe 59.0 14 0.0003 29.2 3.7 28 83-110 74-101 (298)
260 PF00698 Acyl_transf_1: Acyl t 58.6 8.6 0.00019 30.9 2.5 30 81-110 74-103 (318)
261 PRK13398 3-deoxy-7-phosphohept 58.6 89 0.0019 24.6 10.1 99 21-126 132-235 (266)
262 cd01715 ETF_alpha The electron 58.2 42 0.00091 24.1 5.8 62 43-113 44-107 (168)
263 cd07228 Pat_NTE_like_bacteria 57.4 18 0.00039 26.2 3.8 33 80-113 18-50 (175)
264 COG1752 RssA Predicted esteras 57.3 17 0.00036 29.1 3.9 31 83-113 31-61 (306)
265 PRK06490 glutamine amidotransf 56.9 89 0.0019 24.1 7.8 84 22-109 7-103 (239)
266 TIGR02764 spore_ybaN_pdaB poly 56.8 10 0.00023 27.8 2.5 34 24-57 152-188 (191)
267 KOG1202 Animal-type fatty acid 56.6 4.9 0.00011 38.3 0.8 29 75-103 566-594 (2376)
268 TIGR01425 SRP54_euk signal rec 55.9 67 0.0014 27.3 7.2 69 45-122 177-247 (429)
269 TIGR02873 spore_ylxY probable 55.6 13 0.00028 29.2 2.9 35 23-57 230-264 (268)
270 cd07209 Pat_hypo_Ecoli_Z1214_l 55.4 21 0.00046 26.9 4.0 29 85-113 20-48 (215)
271 TIGR00521 coaBC_dfp phosphopan 54.9 1.3E+02 0.0028 25.3 9.1 72 24-98 113-193 (390)
272 TIGR00128 fabD malonyl CoA-acy 54.4 17 0.00038 28.5 3.6 29 83-111 74-103 (290)
273 KOG0781 Signal recognition par 54.4 74 0.0016 27.5 7.1 88 28-124 443-540 (587)
274 PRK13982 bifunctional SbtC-lik 54.3 1.4E+02 0.0031 25.7 9.4 61 23-86 180-247 (475)
275 PRK05282 (alpha)-aspartyl dipe 53.9 1E+02 0.0022 23.8 7.7 89 22-110 30-131 (233)
276 PLN00022 electron transfer fla 53.6 72 0.0016 26.3 6.9 63 42-113 75-141 (356)
277 KOG2872 Uroporphyrinogen decar 53.5 62 0.0013 25.9 6.1 69 23-99 252-336 (359)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 53.3 26 0.00057 25.2 4.1 24 89-112 26-49 (175)
279 PHA02114 hypothetical protein 51.7 21 0.00046 23.3 2.9 33 24-56 83-115 (127)
280 cd07230 Pat_TGL4-5_like Triacy 51.7 18 0.00039 30.5 3.3 37 79-116 90-126 (421)
281 PRK14974 cell division protein 51.4 1E+02 0.0022 25.2 7.5 68 46-122 218-287 (336)
282 COG0279 GmhA Phosphoheptose is 51.3 20 0.00044 26.0 3.0 73 27-103 44-121 (176)
283 cd07232 Pat_PLPL Patain-like p 50.8 11 0.00024 31.6 2.0 42 77-119 82-123 (407)
284 PRK02399 hypothetical protein; 50.7 1.5E+02 0.0033 24.9 9.0 95 27-121 6-127 (406)
285 PF06792 UPF0261: Uncharacteri 50.6 1.5E+02 0.0033 24.9 9.1 97 25-121 3-125 (403)
286 COG1506 DAP2 Dipeptidyl aminop 50.1 74 0.0016 28.4 7.0 41 21-61 549-592 (620)
287 COG3340 PepE Peptidase E [Amin 49.8 62 0.0013 24.6 5.5 38 21-58 30-70 (224)
288 TIGR02884 spore_pdaA delta-lac 49.7 21 0.00046 27.1 3.2 34 24-57 187-221 (224)
289 cd07208 Pat_hypo_Ecoli_yjju_li 49.6 31 0.00066 26.9 4.2 36 78-114 14-50 (266)
290 COG3673 Uncharacterized conser 49.5 1.5E+02 0.0032 24.4 7.8 89 22-110 30-141 (423)
291 PRK05579 bifunctional phosphop 48.8 1.6E+02 0.0035 24.7 8.8 73 23-98 116-196 (399)
292 cd07229 Pat_TGL3_like Triacylg 48.4 22 0.00049 29.6 3.3 31 89-119 109-139 (391)
293 COG1073 Hydrolases of the alph 48.2 1.4 3.1E-05 34.1 -3.5 90 22-111 87-180 (299)
294 cd01985 ETF The electron trans 47.3 63 0.0014 23.4 5.3 69 45-122 54-125 (181)
295 KOG2170 ATPase of the AAA+ sup 46.9 69 0.0015 25.9 5.6 30 21-50 107-138 (344)
296 PF08484 Methyltransf_14: C-me 46.7 74 0.0016 22.8 5.4 48 77-124 53-102 (160)
297 COG3933 Transcriptional antite 46.1 1.2E+02 0.0026 25.9 7.0 76 23-110 109-184 (470)
298 PF03283 PAE: Pectinacetyleste 46.1 67 0.0014 26.6 5.7 49 80-128 143-197 (361)
299 PRK07313 phosphopantothenoylcy 45.9 1.2E+02 0.0025 22.4 6.5 62 22-86 112-179 (182)
300 PF09419 PGP_phosphatase: Mito 45.6 1E+02 0.0022 22.4 6.0 54 45-101 35-88 (168)
301 cd07212 Pat_PNPLA9 Patatin-lik 44.4 50 0.0011 26.6 4.7 20 93-112 34-53 (312)
302 PF03610 EIIA-man: PTS system 44.3 93 0.002 20.6 7.7 72 25-108 2-75 (116)
303 cd07231 Pat_SDP1-like Sugar-De 44.1 20 0.00044 28.9 2.4 34 78-112 84-117 (323)
304 PF00326 Peptidase_S9: Prolyl 43.5 1.1E+02 0.0025 22.5 6.4 62 22-88 143-209 (213)
305 cd07224 Pat_like Patatin-like 42.4 53 0.0011 25.1 4.4 35 79-113 16-51 (233)
306 COG1576 Uncharacterized conser 41.9 74 0.0016 22.8 4.6 56 42-108 60-115 (155)
307 COG4667 Predicted esterase of 41.6 26 0.00057 27.5 2.6 45 77-121 26-70 (292)
308 TIGR03709 PPK2_rel_1 polyphosp 41.5 31 0.00067 27.1 3.0 70 22-103 54-126 (264)
309 PF11713 Peptidase_C80: Peptid 40.6 17 0.00036 26.1 1.3 50 54-103 57-116 (157)
310 cd00401 AdoHcyase S-adenosyl-L 40.3 1.4E+02 0.0031 25.2 6.9 66 40-120 75-140 (413)
311 COG0218 Predicted GTPase [Gene 40.3 39 0.00085 25.3 3.2 15 53-67 72-86 (200)
312 PF02590 SPOUT_MTase: Predicte 40.2 49 0.0011 23.7 3.6 52 41-102 59-110 (155)
313 TIGR00959 ffh signal recogniti 39.6 1.7E+02 0.0038 24.8 7.3 71 43-122 175-247 (428)
314 PF13714 PEP_mutase: Phosphoen 39.4 1.8E+02 0.0039 22.5 6.9 67 30-99 78-144 (238)
315 TIGR03707 PPK2_P_aer polyphosp 38.9 37 0.00081 26.1 3.0 71 22-104 29-102 (230)
316 cd07206 Pat_TGL3-4-5_SDP1 Tria 38.8 46 0.001 26.7 3.6 35 77-112 84-118 (298)
317 PLN03093 Protein SENSITIVITY T 38.6 1.1E+02 0.0023 24.3 5.4 17 89-105 196-212 (273)
318 COG1703 ArgK Putative periplas 38.4 48 0.001 26.7 3.6 65 3-67 91-160 (323)
319 PF05724 TPMT: Thiopurine S-me 37.4 60 0.0013 24.6 4.0 30 24-58 38-67 (218)
320 PRK13256 thiopurine S-methyltr 36.5 38 0.00083 25.9 2.8 29 26-59 46-74 (226)
321 TIGR01361 DAHP_synth_Bsub phos 36.2 2.1E+02 0.0046 22.4 10.1 95 21-125 130-232 (260)
322 cd03818 GT1_ExpC_like This fam 35.5 86 0.0019 25.8 5.0 38 26-65 2-39 (396)
323 PF01583 APS_kinase: Adenylyls 35.3 74 0.0016 22.8 3.9 37 24-60 2-40 (156)
324 PLN02735 carbamoyl-phosphate s 35.2 2.4E+02 0.0052 27.3 8.2 83 41-126 599-694 (1102)
325 cd07221 Pat_PNPLA3 Patatin-lik 35.0 73 0.0016 24.8 4.2 22 92-113 33-54 (252)
326 cd07218 Pat_iPLA2 Calcium-inde 34.9 73 0.0016 24.7 4.1 36 78-113 16-52 (245)
327 cd07220 Pat_PNPLA2 Patatin-lik 34.3 70 0.0015 24.9 4.0 22 92-113 37-58 (249)
328 TIGR00064 ftsY signal recognit 34.2 2.3E+02 0.0049 22.3 6.9 69 46-123 150-226 (272)
329 PF14253 AbiH: Bacteriophage a 33.8 45 0.00098 25.8 2.9 19 89-107 233-251 (270)
330 PRK11460 putative hydrolase; P 33.7 1.4E+02 0.003 22.7 5.5 40 21-60 146-188 (232)
331 KOG0780 Signal recognition par 33.5 2.8E+02 0.0061 23.5 7.2 53 44-105 177-229 (483)
332 COG3946 VirJ Type IV secretory 33.4 1.8E+02 0.004 24.6 6.2 101 24-124 49-155 (456)
333 TIGR02113 coaC_strep phosphopa 33.4 1.9E+02 0.0042 21.1 6.2 60 22-83 111-175 (177)
334 PF01734 Patatin: Patatin-like 33.3 43 0.00094 23.8 2.6 24 89-112 25-48 (204)
335 TIGR03586 PseI pseudaminic aci 33.2 2.7E+02 0.0058 22.7 9.1 80 21-110 132-213 (327)
336 PF04244 DPRP: Deoxyribodipyri 33.1 1.6E+02 0.0034 22.6 5.6 48 39-96 51-98 (224)
337 TIGR02816 pfaB_fam PfaB family 32.9 58 0.0013 28.5 3.6 31 82-112 255-286 (538)
338 cd05007 SIS_Etherase N-acetylm 32.4 1.3E+02 0.0028 23.5 5.2 38 77-114 35-73 (257)
339 COG4850 Uncharacterized conser 32.2 1.7E+02 0.0037 23.9 5.7 100 24-126 214-315 (373)
340 PRK00103 rRNA large subunit me 32.0 1.3E+02 0.0028 21.6 4.7 44 51-103 68-111 (157)
341 cd07204 Pat_PNPLA_like Patatin 31.6 86 0.0019 24.2 4.1 21 93-113 33-53 (243)
342 COG1856 Uncharacterized homolo 31.5 1.8E+02 0.0039 22.5 5.4 79 43-123 103-187 (275)
343 TIGR03569 NeuB_NnaB N-acetylne 31.4 2.9E+02 0.0063 22.6 8.6 81 21-110 131-214 (329)
344 PF01118 Semialdhyde_dh: Semia 31.2 89 0.0019 20.9 3.7 32 92-124 1-33 (121)
345 cd03146 GAT1_Peptidase_E Type 31.2 2.3E+02 0.0049 21.2 7.7 86 21-108 29-130 (212)
346 COG4822 CbiK Cobalamin biosynt 31.0 2.5E+02 0.0053 21.6 6.7 39 22-60 137-177 (265)
347 PF03681 UPF0150: Uncharacteri 30.9 49 0.0011 18.1 2.0 34 48-87 11-44 (48)
348 PF03853 YjeF_N: YjeF-related 30.8 62 0.0014 23.3 3.0 36 21-56 23-58 (169)
349 cd01819 Patatin_and_cPLA2 Pata 30.5 99 0.0021 21.8 4.0 19 91-109 28-46 (155)
350 cd02651 nuc_hydro_IU_UC_XIUA n 30.4 2.4E+02 0.0053 22.4 6.6 50 74-126 98-151 (302)
351 PRK10867 signal recognition pa 30.3 3.5E+02 0.0075 23.1 8.6 71 42-121 175-247 (433)
352 PRK13938 phosphoheptose isomer 30.0 1.6E+02 0.0035 21.9 5.2 25 89-113 44-68 (196)
353 PF03033 Glyco_transf_28: Glyc 29.9 35 0.00075 23.2 1.5 35 26-60 2-36 (139)
354 PRK04148 hypothetical protein; 29.9 1E+02 0.0022 21.5 3.8 45 76-124 3-47 (134)
355 PRK05441 murQ N-acetylmuramic 29.5 1.5E+02 0.0033 23.7 5.3 37 77-113 48-85 (299)
356 PF08433 KTI12: Chromatin asso 29.3 1.4E+02 0.0031 23.4 5.0 38 25-62 2-41 (270)
357 COG0552 FtsY Signal recognitio 28.9 3.3E+02 0.0071 22.4 8.1 96 21-131 136-236 (340)
358 PRK11320 prpB 2-methylisocitra 28.7 3.1E+02 0.0067 22.0 7.8 66 30-98 87-156 (292)
359 TIGR02069 cyanophycinase cyano 28.5 2.8E+02 0.0061 21.5 7.0 91 20-110 25-134 (250)
360 cd07217 Pat17_PNPLA8_PNPLA9_li 28.5 53 0.0011 26.9 2.5 20 93-112 43-62 (344)
361 PF06792 UPF0261: Uncharacteri 28.5 1.4E+02 0.0031 25.1 5.0 43 22-64 183-225 (403)
362 cd07213 Pat17_PNPLA8_PNPLA9_li 28.4 52 0.0011 26.0 2.5 20 93-112 36-55 (288)
363 PF03976 PPK2: Polyphosphate k 28.0 30 0.00066 26.5 1.0 37 23-59 30-68 (228)
364 PLN02251 pyrophosphate-depende 27.9 4.4E+02 0.0095 23.5 9.1 88 26-114 193-293 (568)
365 PRK07053 glutamine amidotransf 27.7 2.8E+02 0.0061 21.2 6.5 83 24-110 4-101 (234)
366 PRK03363 fixB putative electro 27.6 3.3E+02 0.0072 22.1 6.8 61 43-112 41-103 (313)
367 PRK13397 3-deoxy-7-phosphohept 27.0 3.1E+02 0.0067 21.5 9.7 41 21-61 120-160 (250)
368 PRK11613 folP dihydropteroate 26.9 3.3E+02 0.0071 21.7 8.4 56 41-105 167-225 (282)
369 PRK07877 hypothetical protein; 26.8 1.3E+02 0.0028 27.6 4.8 39 86-126 103-141 (722)
370 PF13207 AAA_17: AAA domain; P 26.7 1.4E+02 0.0031 19.5 4.2 31 26-58 1-32 (121)
371 PRK12595 bifunctional 3-deoxy- 26.7 3.7E+02 0.008 22.3 9.1 75 21-101 223-299 (360)
372 cd07211 Pat_PNPLA8 Patatin-lik 26.3 53 0.0011 26.2 2.2 18 93-110 43-60 (308)
373 COG1598 Predicted nuclease of 26.3 1.4E+02 0.003 18.2 3.6 34 47-86 12-45 (73)
374 PRK00726 murG undecaprenyldiph 25.4 3.6E+02 0.0078 21.7 7.2 35 26-60 5-39 (357)
375 PF03205 MobB: Molybdopterin g 25.2 1.4E+02 0.003 20.8 3.9 41 25-65 1-43 (140)
376 PRK09444 pntB pyridine nucleot 25.1 2.4E+02 0.0051 24.3 5.7 74 23-96 306-387 (462)
377 cd07222 Pat_PNPLA4 Patatin-lik 25.1 1.1E+02 0.0025 23.5 3.8 18 93-110 33-50 (246)
378 PRK06849 hypothetical protein; 24.8 2.1E+02 0.0046 23.6 5.6 59 40-99 18-85 (389)
379 PF13580 SIS_2: SIS domain; PD 24.6 2.4E+02 0.0052 19.4 5.4 25 89-113 34-58 (138)
380 COG3007 Uncharacterized paraqu 24.5 1.7E+02 0.0037 23.6 4.5 44 70-113 16-64 (398)
381 PLN02925 4-hydroxy-3-methylbut 24.0 1.5E+02 0.0033 26.9 4.6 41 51-97 630-670 (733)
382 PRK07933 thymidylate kinase; V 23.7 2E+02 0.0043 21.6 4.8 39 26-64 2-42 (213)
383 KOG1200 Mitochondrial/plastidi 23.7 3.4E+02 0.0073 20.7 6.7 34 25-60 15-48 (256)
384 PRK13255 thiopurine S-methyltr 23.6 1E+02 0.0023 23.3 3.2 17 43-59 52-68 (218)
385 PF13383 Methyltransf_22: Meth 23.5 1.2E+02 0.0026 23.5 3.5 38 23-60 192-229 (242)
386 TIGR01358 DAHP_synth_II 3-deox 23.4 2.9E+02 0.0064 23.5 5.9 64 25-88 310-377 (443)
387 COG0813 DeoD Purine-nucleoside 23.1 1.8E+02 0.0038 22.4 4.2 38 89-126 54-93 (236)
388 PRK08105 flavodoxin; Provision 23.1 1.9E+02 0.0042 20.3 4.3 15 34-48 63-77 (149)
389 PLN02733 phosphatidylcholine-s 23.0 71 0.0015 27.2 2.4 18 19-36 15-32 (440)
390 KOG4231 Intracellular membrane 22.9 93 0.002 27.1 3.0 57 44-112 410-471 (763)
391 PRK02399 hypothetical protein; 22.5 2.1E+02 0.0046 24.1 4.9 43 22-64 184-226 (406)
392 COG1282 PntB NAD/NADP transhyd 22.4 4.1E+02 0.009 22.3 6.3 75 22-96 307-389 (463)
393 KOG1532 GTPase XAB1, interacts 22.1 1.5E+02 0.0032 23.9 3.7 39 20-58 15-55 (366)
394 COG1092 Predicted SAM-dependen 22.0 1.9E+02 0.0041 24.3 4.6 58 42-101 280-339 (393)
395 TIGR03840 TMPT_Se_Te thiopurin 22.0 1.1E+02 0.0024 23.1 3.1 16 43-58 49-64 (213)
396 COG1255 Uncharacterized protei 22.0 99 0.0021 21.1 2.4 24 38-61 24-47 (129)
397 PF02502 LacAB_rpiB: Ribose/Ga 21.9 2.9E+02 0.0063 19.4 6.2 73 40-124 15-88 (140)
398 PF09370 TIM-br_sig_trns: TIM- 21.9 1.7E+02 0.0037 23.1 4.0 77 42-121 162-245 (268)
399 PLN02291 phospho-2-dehydro-3-d 21.8 3E+02 0.0064 23.7 5.6 64 25-88 330-397 (474)
400 cd07199 Pat17_PNPLA8_PNPLA9_li 21.8 1.7E+02 0.0037 22.6 4.2 19 93-111 36-54 (258)
401 PRK05665 amidotransferase; Pro 21.6 1.7E+02 0.0036 22.6 4.0 38 72-109 71-108 (240)
402 KOG2214 Predicted esterase of 21.6 42 0.00092 28.9 0.8 45 78-123 190-234 (543)
403 PF14606 Lipase_GDSL_3: GDSL-l 21.3 2.4E+02 0.0052 20.8 4.5 18 110-129 89-106 (178)
404 PRK05368 homoserine O-succinyl 21.2 1.2E+02 0.0027 24.3 3.3 34 78-111 121-154 (302)
405 PLN02924 thymidylate kinase 21.0 2.7E+02 0.0057 21.1 5.0 42 19-60 11-54 (220)
406 PRK10886 DnaA initiator-associ 21.0 2.9E+02 0.0062 20.6 5.1 24 89-112 40-63 (196)
407 PRK11916 electron transfer fla 21.0 4.6E+02 0.0099 21.3 8.3 61 42-112 40-102 (312)
408 PF12242 Eno-Rase_NADH_b: NAD( 21.0 2.3E+02 0.0049 17.7 4.6 40 73-112 18-61 (78)
409 COG0331 FabD (acyl-carrier-pro 20.7 1.2E+02 0.0025 24.6 3.1 22 89-110 83-104 (310)
410 COG3887 Predicted signaling pr 20.6 2.9E+02 0.0062 24.7 5.4 104 20-126 255-378 (655)
411 PF03575 Peptidase_S51: Peptid 20.5 69 0.0015 22.6 1.6 13 93-105 70-82 (154)
412 TIGR02852 spore_dpaB dipicolin 20.4 2.2E+02 0.0048 21.1 4.3 70 22-93 115-185 (187)
413 cd01406 SIR2-like Sir2-like: P 20.4 1.7E+02 0.0037 22.3 3.9 44 61-104 143-193 (242)
414 TIGR00246 tRNA_RlmH_YbeA rRNA 20.2 2.2E+02 0.0048 20.3 4.1 50 42-103 59-108 (153)
415 TIGR00936 ahcY adenosylhomocys 20.0 4.4E+02 0.0094 22.3 6.4 63 40-120 71-133 (406)
No 1
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.94 E-value=8.4e-26 Score=177.42 Aligned_cols=121 Identities=20% Similarity=0.243 Sum_probs=105.3
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
+..++.++.+.... .+.++++|||+||++++...|.++++.|.+. |+|+++|+||||.|+.+. ..++++++++++.
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~ 82 (276)
T TIGR02240 7 IDLDGQSIRTAVRP--GKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAA 82 (276)
T ss_pred eccCCcEEEEEEec--CCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC-CcCcHHHHHHHHH
Confidence 34566676665542 2234589999999999999999999999886 999999999999998653 4688999999999
Q ss_pred HHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 83 QLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 83 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+++++++.++++|+||||||.+++.+|.++|++|+++|+++++..
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 999999888999999999999999999999999999999999764
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=2.9e-25 Score=175.80 Aligned_cols=104 Identities=27% Similarity=0.532 Sum_probs=96.3
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC------CCCCChhhHHHHHHHHHHHhcCCCeEE
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER------LPPCNVTSKREHFYQLWKTYIKRPMIL 95 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (216)
.+++||++||++++...|+.+.+.|.+. |+|+++|+||||.|+.+. ...++++++++++.++++++..++++|
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~l 106 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFV 106 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEE
Confidence 3589999999999999999999999988 899999999999998653 135899999999999999998899999
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+||||||.+++.+|.++|++|+++|++++..
T Consensus 107 vGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 107 ICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred EEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 9999999999999999999999999999865
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=4.7e-25 Score=178.66 Aligned_cols=124 Identities=19% Similarity=0.298 Sum_probs=105.7
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcch-HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE-WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
+.+|.++++..+.|.....+++|||+||++++... |..+++.|.+.||+|+++|+||||.|+.......+++++++++.
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~ 147 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVI 147 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHH
Confidence 45677888888887655567899999999988764 68899999998999999999999999865333458999999999
Q ss_pred HHHHHhcC------CCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 83 QLWKTYIK------RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 83 ~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++++.+.. .+++|+||||||.+++.+|.++|++++++||++|...
T Consensus 148 ~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 148 EHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 99887732 3799999999999999999999999999999998664
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=1.4e-24 Score=172.05 Aligned_cols=115 Identities=26% Similarity=0.404 Sum_probs=102.5
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHH
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQL 84 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 84 (216)
.++.++.+... +++++|||+||++++...|+.+++.|.+. ++|+++|+||||.|+.+. ..++++++++++.++
T Consensus 14 ~~g~~i~y~~~-----G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~l 86 (295)
T PRK03592 14 VLGSRMAYIET-----GEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAW 86 (295)
T ss_pred ECCEEEEEEEe-----CCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHH
Confidence 34555555443 35689999999999999999999999998 699999999999998764 568999999999999
Q ss_pred HHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 85 WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 85 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
++++..++++++||||||.+|+.+|.++|++|+++|++++..
T Consensus 87 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 87 FDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 999988999999999999999999999999999999999854
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=3.7e-24 Score=167.97 Aligned_cols=124 Identities=19% Similarity=0.261 Sum_probs=101.3
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
+..+|-++++..+.|. +..++.|+++||++++...|..+++.|.+.||+|+++|+||||.|+.......++.++++++.
T Consensus 6 ~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 6 FNLDNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred ecCCCCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 3457888999988874 344567777799999999999999999999999999999999999764322345566666666
Q ss_pred HHHHHh----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 83 QLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 83 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+.++.+ ...+++++||||||.+++.+|.++|++++++|+++|...
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 666554 345799999999999999999999999999999998654
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=1.2e-23 Score=170.96 Aligned_cols=105 Identities=27% Similarity=0.473 Sum_probs=95.3
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
.+|+|||+||++++...|.+++..|.+. |+|+++|+||||.|+.+....++++++++++.++++++..++++|+|||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~G 165 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAKN-YTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVG 165 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHH
Confidence 4589999999999999999999999875 999999999999998764346899999999999999998889999999999
Q ss_pred HHHHHHHHH-hCccccceEEEEccccc
Q 027952 102 AAVAVDFAV-NHPEAVENLVFIDASVY 127 (216)
Q Consensus 102 g~~a~~~a~-~~~~~~~~lvli~~~~~ 127 (216)
|.+++.+|. ++|++|+++|+++++..
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEECCccc
Confidence 999999987 57999999999998653
No 7
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.92 E-value=2.2e-23 Score=161.52 Aligned_cols=108 Identities=21% Similarity=0.324 Sum_probs=98.2
Q ss_pred ccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEE
Q 027952 16 KPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMIL 95 (216)
Q Consensus 16 ~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (216)
.+.++.++|+||++||+.++...|..+++.|.+. |+|+++|+||||.|... ..++++++++++.++++++..++++|
T Consensus 9 ~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~--~~~~~~~~~~d~~~~l~~l~~~~~~l 85 (255)
T PRK10673 9 TAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRD--PVMNYPAMAQDLLDTLDALQIEKATF 85 (255)
T ss_pred cCCCCCCCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 3445567899999999999999999999999876 99999999999999865 45899999999999999998888999
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+||||||.++..+|.++|++|+++|++++++
T Consensus 86 vGhS~Gg~va~~~a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPDRIDKLVAIDIAP 116 (255)
T ss_pred EEECHHHHHHHHHHHhCHhhcceEEEEecCC
Confidence 9999999999999999999999999998654
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=8.7e-24 Score=161.21 Aligned_cols=210 Identities=15% Similarity=0.166 Sum_probs=143.5
Q ss_pred CCCCcceEEEeeeccCCC-CCCCcEEEEcCCCCCc-chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH
Q 027952 3 VNFSESCIMSSVVKPLKP-SKTSPVVLLHGFDSSC-LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH 80 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~-~~~~~lv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 80 (216)
++..+..+++..|.|... ..+..|+++||+++.. ..+..++..|++.||.|+++|++|||.|+.......+++..+++
T Consensus 33 ~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D 112 (313)
T KOG1455|consen 33 TNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDD 112 (313)
T ss_pred EcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHH
Confidence 456777899999999654 4566789999999876 67889999999999999999999999999876667789999999
Q ss_pred HHHHHHHh------cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCCCCCCCCchhhHHhhhhhhhhcchh
Q 027952 81 FYQLWKTY------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTGNSAKLPSIIAYAGVYLLRSIPV 154 (216)
Q Consensus 81 ~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (216)
+.++.+.. ...+.++.||||||.+++.++.++|+..+++|+++|.....+..........+......+.+++..
T Consensus 113 ~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~ 192 (313)
T KOG1455|consen 113 VISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKI 192 (313)
T ss_pred HHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceee
Confidence 99988864 345899999999999999999999999999999999887655443333333333333333343331
Q ss_pred hHHHHHhhhcccccccchhhhhcccccccccchh--hhhhHhhhcCcccccccccccccccccC
Q 027952 155 RLYASILALNHTSFSTIIDWTNIGRLHCLYPWWE--DATVSFMVSGGYNVSTQIEQVCINAFFI 216 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~i~~P~Lii 216 (216)
---+............ .+..... ...+.+.. .....+++ ...++..++.++++|.+|+
T Consensus 193 vp~~d~~~~~~kdp~~-r~~~~~n--pl~y~g~pRl~T~~ElLr-~~~~le~~l~~vtvPflil 252 (313)
T KOG1455|consen 193 VPTKDIIDVAFKDPEK-RKILRSD--PLCYTGKPRLKTAYELLR-VTADLEKNLNEVTVPFLIL 252 (313)
T ss_pred cCCccccccccCCHHH-HHHhhcC--CceecCCccHHHHHHHHH-HHHHHHHhcccccccEEEE
Confidence 1111101111011111 1111111 12222221 22222322 2668889999999999985
No 9
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.91 E-value=1.4e-23 Score=162.96 Aligned_cols=97 Identities=32% Similarity=0.428 Sum_probs=85.0
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHH
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAA 103 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 103 (216)
|+|||+||++++...|+++.+.|.+. |+|+++|+||||.|+.. ..++.+++++++.+ +..++++++||||||.
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ 86 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF--GALSLADMAEAVLQ----QAPDKAIWLGWSLGGL 86 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC--CCCCHHHHHHHHHh----cCCCCeEEEEECHHHH
Confidence 46999999999999999999999987 99999999999999754 34677777766553 4567899999999999
Q ss_pred HHHHHHHhCccccceEEEEccccc
Q 027952 104 VAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 104 ~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+++.+|.++|++++++|++++++.
T Consensus 87 ia~~~a~~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 87 VASQIALTHPERVQALVTVASSPC 110 (256)
T ss_pred HHHHHHHhChHhhheEEEecCccc
Confidence 999999999999999999998654
No 10
>PLN02578 hydrolase
Probab=99.91 E-value=3.4e-23 Score=168.10 Aligned_cols=105 Identities=32% Similarity=0.593 Sum_probs=96.8
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
+++++||++||++++...|..+.+.|.+. |+|+++|+||||.|+.+. ..|+.+.+++++.++++++..++++++|||+
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~ 161 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEVVKEPAVLVGNSL 161 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhccCCeEEEEECH
Confidence 35688999999999999999999999876 999999999999998763 5689999999999999999888999999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
||.+++.+|.++|++++++|++++++.
T Consensus 162 Gg~ia~~~A~~~p~~v~~lvLv~~~~~ 188 (354)
T PLN02578 162 GGFTALSTAVGYPELVAGVALLNSAGQ 188 (354)
T ss_pred HHHHHHHHHHhChHhcceEEEECCCcc
Confidence 999999999999999999999998654
No 11
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.91 E-value=8.7e-24 Score=162.60 Aligned_cols=100 Identities=23% Similarity=0.260 Sum_probs=90.6
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGA 102 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 102 (216)
+|+|||+||++++...|+++.+.| + +|+|+++|+||||.|+.+. ..+++++++++.++++++..++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNILPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHH
Confidence 578999999999999999999998 3 4999999999999998753 45899999999999999988999999999999
Q ss_pred HHHHHHHHhCccc-cceEEEEcccc
Q 027952 103 AVAVDFAVNHPEA-VENLVFIDASV 126 (216)
Q Consensus 103 ~~a~~~a~~~~~~-~~~lvli~~~~ 126 (216)
.+++.+|.++|+. ++++|++++..
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999654 99999998754
No 12
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=2.9e-23 Score=167.00 Aligned_cols=123 Identities=20% Similarity=0.314 Sum_probs=101.7
Q ss_pred CCcceEEEeeeccCCC-CCCCcEEEEcCCCCCc-chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 5 FSESCIMSSVVKPLKP-SKTSPVVLLHGFDSSC-LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~-~~~~~lv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
.++.++++..+.|... ..+++||++||++++. ..|..+++.|.++||+|+++|+||||.|+.......+++.+++++.
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~ 119 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCL 119 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHH
Confidence 4677788888876433 3457799999998764 3467788899999999999999999999754333457889999999
Q ss_pred HHHHHhc------CCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 83 QLWKTYI------KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 83 ~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
.+++.+. ..+++|+||||||.+++.++.++|++++++|+++|...
T Consensus 120 ~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 120 SFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 9998873 24799999999999999999999999999999998653
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=6.1e-23 Score=163.19 Aligned_cols=104 Identities=26% Similarity=0.390 Sum_probs=96.2
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
++++|||+||++++...|..+.+.|.+.||+|+++|+||||.|+.+. ...++++++++++.+++++++.++++|+||||
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~ 124 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDW 124 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECh
Confidence 46899999999999999999999999888999999999999997653 24589999999999999999888999999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
||.++..+|.++|++|+++|++++.
T Consensus 125 Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 125 GGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHhChhheeEEEEeCCC
Confidence 9999999999999999999999874
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=1.1e-22 Score=159.80 Aligned_cols=106 Identities=22% Similarity=0.298 Sum_probs=88.4
Q ss_pred CCCCcEEEEcCCCCCcchHHh---hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 21 SKTSPVVLLHGFDSSCLEWRC---TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
+++++||++||++++...|.. .+..|.+.||+|+++|+||||.|+............++++.++++++..++++++|
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG 107 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVG 107 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEE
Confidence 456899999999988887764 34567677899999999999999865211112225688999999999889999999
Q ss_pred eChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 98 PSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 98 ~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
|||||.+++.+|.++|++++++|+++++.
T Consensus 108 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 108 NSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred ECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 99999999999999999999999999864
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=9.4e-23 Score=160.99 Aligned_cols=126 Identities=20% Similarity=0.275 Sum_probs=108.8
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCC-CCCCCCCChhhHHHHH
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSD-LERLPPCNVTSKREHF 81 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~-~~~~~~~~~~~~~~~~ 81 (216)
++.++..+++..+.+..+.. .+||++||++++...|..+++.|...||.|+++|+||||.|. .......++.++..++
T Consensus 15 ~~~d~~~~~~~~~~~~~~~~-g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl 93 (298)
T COG2267 15 TGADGTRLRYRTWAAPEPPK-GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDL 93 (298)
T ss_pred ecCCCceEEEEeecCCCCCC-cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHH
Confidence 35677788888887643333 799999999999999999999999999999999999999997 4444555699999999
Q ss_pred HHHHHHhc----CCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccC
Q 027952 82 YQLWKTYI----KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAE 129 (216)
Q Consensus 82 ~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~ 129 (216)
..+++... ..+++++||||||.+++.++.+++..++++||.+|.....
T Consensus 94 ~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 94 DAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 99999883 5789999999999999999999999999999999977543
No 16
>PRK06489 hypothetical protein; Provisional
Probab=99.90 E-value=8.3e-23 Score=166.18 Aligned_cols=104 Identities=19% Similarity=0.207 Sum_probs=86.4
Q ss_pred CCcEEEEcCCCCCcchHH--hhhhHH-------HhCCCeEEEEcCCCCCCCCCCCC------CCCChhhHHHHHHHHH-H
Q 027952 23 TSPVVLLHGFDSSCLEWR--CTYPLL-------EEAGLETWAVDILGWGFSDLERL------PPCNVTSKREHFYQLW-K 86 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~g~G~s~~~~~------~~~~~~~~~~~~~~~~-~ 86 (216)
+|+|||+||++++...|. .+.+.| ...+|+|+++|+||||.|+.+.. ..|+++++++++..++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999988875 454444 12359999999999999986531 2478999999888855 7
Q ss_pred HhcCCCeE-EEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 87 TYIKRPMI-LVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 87 ~~~~~~~~-l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+++.++++ |+||||||++|+.+|.++|++|+++|++++.+
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 77777875 89999999999999999999999999998864
No 17
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=5.4e-23 Score=159.66 Aligned_cols=124 Identities=27% Similarity=0.409 Sum_probs=102.3
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCC---CCCChhhHHHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERL---PPCNVTSKREHFY 82 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~---~~~~~~~~~~~~~ 82 (216)
++..+.+..... ...++.++|++||+|.....|-.-.+.|++. ++|+++|++|+|.|+++.. .......+++-++
T Consensus 74 ~~~~iw~~~~~~-~~~~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSN-ESANKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecc-cccCCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 334444444433 2356799999999999999999999999995 9999999999999999862 2223456777888
Q ss_pred HHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCCC
Q 027952 83 QLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGT 131 (216)
Q Consensus 83 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~~ 131 (216)
+.....+..+.+|+|||+||.+|..||.+||++|++|||++|.+..+..
T Consensus 152 ~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 152 QWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 8877889999999999999999999999999999999999998876643
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=3.2e-22 Score=156.60 Aligned_cols=105 Identities=28% Similarity=0.354 Sum_probs=96.0
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
.++++||++||++++...|+.+.+.|.+. |+|+++|+||||.|+.+....++++++++++.++++++..++++|+||||
T Consensus 26 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~ 104 (278)
T TIGR03056 26 TAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSA 104 (278)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 34689999999999999999999999876 99999999999999876434689999999999999998878899999999
Q ss_pred hHHHHHHHHHhCccccceEEEEcccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
||.+++.+|.++|++++++|++++..
T Consensus 105 Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 105 GAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cHHHHHHHHHhCCcccceEEEEcCcc
Confidence 99999999999999999999999865
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.89 E-value=6.9e-22 Score=160.87 Aligned_cols=106 Identities=25% Similarity=0.433 Sum_probs=97.0
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCC---CCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERL---PPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
+++++|||+||++++...|+++++.|.+. |+|+++|+||||.|+.+.. ..++++++++++.++++++..++++|+|
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~~L~~~-~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG 203 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLPVLSKN-YHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVV 203 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEE
Confidence 45689999999999999999999999875 9999999999999987642 2589999999999999999888999999
Q ss_pred eChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 98 PSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 98 ~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
||+||.+++.+|.++|++|+++|+++++..
T Consensus 204 ~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 204 QGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred ECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 999999999999999999999999998753
No 20
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=1.7e-22 Score=156.90 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=93.4
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcC-CCeEEEeeChhHH
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIK-RPMILVGPSLGAA 103 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ 103 (216)
+|||+||++.+...|+.+.+.|.+.||+|+++|+||||.|+.+....++++++++++.++++++.. ++++++||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 599999999999999999999987789999999999999976533468899999999999999865 5899999999999
Q ss_pred HHHHHHHhCccccceEEEEcccc
Q 027952 104 VAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 104 ~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+++.+|.++|++|+++|++++..
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred HHHHHHHhCchheeEEEEEcccc
Confidence 99999999999999999999864
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=2.3e-22 Score=155.08 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=96.3
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
.++|+||++||++++...|..+.+.|.+. |+|+++|+||||.|+......++++++++++.++++++...+++++||||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~ 89 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQR-FHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHAL 89 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHhc-cEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 45789999999999999999999888875 99999999999999865445689999999999999999888999999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
||.+++.+|.++|+.++++|++++...
T Consensus 90 Gg~~a~~~a~~~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 90 GGLIGLQLALRYPERLLSLVLINAWSR 116 (257)
T ss_pred hHHHHHHHHHHChHHhHHheeecCCCC
Confidence 999999999999999999999997553
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.89 E-value=9.3e-23 Score=153.83 Aligned_cols=101 Identities=31% Similarity=0.477 Sum_probs=92.4
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHH
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAV 104 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 104 (216)
||++||++++...|..+++.|+ +||+|+++|+||+|.|+... ...++++++++++.++++++..++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 68999999999999998753 246789999999999999998889999999999999
Q ss_pred HHHHHHhCccccceEEEEccccc
Q 027952 105 AVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 105 a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++.++.++|++|+++|++++...
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccceeeccccc
Confidence 99999999999999999999774
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.89 E-value=2.9e-22 Score=153.24 Aligned_cols=103 Identities=27% Similarity=0.453 Sum_probs=92.3
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHH-HHHHHHHhcCCCeEEEeeCh
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREH-FYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~S~ 100 (216)
+|+||++||++++...|.++++.|. .||+|+++|+||+|.|+.+. ...+++++.+++ +..+++.+..++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 67999999999999997653 245788889988 77777887788999999999
Q ss_pred hHHHHHHHHHhCccccceEEEEcccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
||.+++.+|.++|+.++++|++++..
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCC
Confidence 99999999999999999999999865
No 24
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.88 E-value=3.2e-22 Score=154.74 Aligned_cols=109 Identities=31% Similarity=0.449 Sum_probs=103.9
Q ss_pred CCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCC-CCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 19 KPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERL-PPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
..+.+|.++++||+......|+.....|+.+||+|+++|+||+|.|+.+.. ..|+++..++++..++++++.++++++|
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvg 119 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVG 119 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEe
Confidence 456789999999999999999999999999999999999999999998873 7899999999999999999999999999
Q ss_pred eChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 98 PSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 98 ~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|+||+++|.++|..+|++|+++|+++.+..
T Consensus 120 HDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 120 HDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred ccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 999999999999999999999999998775
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.88 E-value=1.5e-21 Score=149.19 Aligned_cols=98 Identities=30% Similarity=0.397 Sum_probs=85.2
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGA 102 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 102 (216)
.|+||++||++++...|..+.+.|.+. |+|+++|+||||.|+.. ..++++++++++.+.+ .++++++||||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSAH-FTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----PDPAIWLGWSLGG 76 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhccC-eEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----CCCeEEEEEcHHH
Confidence 378999999999999999999999875 99999999999998754 3467777777665543 4689999999999
Q ss_pred HHHHHHHHhCccccceEEEEccccc
Q 027952 103 AVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 103 ~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
.+++.+|.++|++++++|++++...
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcc
Confidence 9999999999999999999998764
No 26
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.87 E-value=2.2e-21 Score=161.17 Aligned_cols=122 Identities=27% Similarity=0.457 Sum_probs=101.9
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHh-hhhHHH---hCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRC-TYPLLE---EAGLETWAVDILGWGFSDLERLPPCNVTSKREHF 81 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 81 (216)
++..+++....|.....+++|||+||++++...|.. +...|. +.+|+|+++|+||||.|+.+....|+++++++++
T Consensus 184 ~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l 263 (481)
T PLN03087 184 SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMI 263 (481)
T ss_pred CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHH
Confidence 344666666666544456899999999999999975 446555 3579999999999999987644568999999999
Q ss_pred H-HHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 82 Y-QLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 82 ~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
. .++++++.++++++||||||.+++.+|.++|++|+++|+++++..
T Consensus 264 ~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 264 ERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 5 788998889999999999999999999999999999999998654
No 27
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=2.5e-21 Score=158.40 Aligned_cols=120 Identities=19% Similarity=0.255 Sum_probs=98.6
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLW 85 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 85 (216)
++..+++..+.|..+..+++||++||++++...|..+++.|.+.||+|+++|+||||.|+.......+++.+++++..++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l 198 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFL 198 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 34556666676644445679999999999999999999999999999999999999999875433457888899999988
Q ss_pred HHhc----CCCeEEEeeChhHHHHHHHHHhCc---cccceEEEEcccc
Q 027952 86 KTYI----KRPMILVGPSLGAAVAVDFAVNHP---EAVENLVFIDASV 126 (216)
Q Consensus 86 ~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~---~~~~~lvli~~~~ 126 (216)
+.+. ..+++++||||||.+++.++. +| ++++++|+.+|..
T Consensus 199 ~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 199 EKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 8873 347999999999999998765 55 4799999998865
No 28
>PRK10749 lysophospholipase L2; Provisional
Probab=99.87 E-value=3.6e-21 Score=154.86 Aligned_cols=121 Identities=16% Similarity=0.115 Sum_probs=103.1
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-----CCCCChhhHHH
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-----LPPCNVTSKRE 79 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~ 79 (216)
.++.++.+..+.+. ..+++||++||++++...|..++..|.+.||+|+++|+||||.|+... ...++++++++
T Consensus 38 ~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 115 (330)
T PRK10749 38 VDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVD 115 (330)
T ss_pred CCCCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHH
Confidence 45666777777653 345789999999999999999999999999999999999999997542 12358999999
Q ss_pred HHHHHHHHh----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 80 HFYQLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 80 ~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++..+++++ ...+++++||||||.++..+|.++|+.++++|+++|...
T Consensus 116 d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 116 DLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 999999886 457899999999999999999999999999999998653
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=1.9e-21 Score=148.99 Aligned_cols=104 Identities=20% Similarity=0.350 Sum_probs=94.7
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
++|+||++||++++...|..+++.|.+ ||+|+++|+||||.|+.+. ..++++++++++.++++.++.++++++|||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~G 89 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGIERAVFCGLSLG 89 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCceEEEEeCch
Confidence 568899999999999999999999975 5999999999999997653 56799999999999999998889999999999
Q ss_pred HHHHHHHHHhCccccceEEEEccccc
Q 027952 102 AAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 102 g~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|.+++.+|.++|++++++|+++++..
T Consensus 90 g~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 90 GLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred HHHHHHHHHHCHHHhHHHhhccCccc
Confidence 99999999999999999999987653
No 30
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=4.1e-21 Score=151.61 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=95.1
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
+++++|||+||++.+...|+.+.+.|.+. |+|+++|+||||.|+.+....++.+++++++.+++++++.++++++||||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~ 110 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDW 110 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 34689999999999888999999999876 99999999999999876434688999999999999999888999999999
Q ss_pred hHHHHHHHHHhCccccceEEEEcccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
||.++..+|.++|++|+++|++++..
T Consensus 111 Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 111 GGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred cHHHHHHHHHhChhheeEEEEECccc
Confidence 99999999999999999999987754
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=9.3e-21 Score=155.92 Aligned_cols=117 Identities=24% Similarity=0.388 Sum_probs=93.4
Q ss_pred eEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChh----hHHHHHHHH
Q 027952 9 CIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVT----SKREHFYQL 84 (216)
Q Consensus 9 ~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~~~~~~ 84 (216)
.+.+..+. +++++|+||++||++++...|...+..|.+. |+|+++|+||||.|+.+.....+.+ .+++++.++
T Consensus 93 ~~~~~~~~--~~~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 93 FINTVTFD--SKEDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW 169 (402)
T ss_pred eEEEEEec--CCCCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 44444443 2346799999999999999998888999886 9999999999999986532212222 245667777
Q ss_pred HHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 85 WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 85 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
++.++.++++|+||||||.+++.+|.++|++++++|+++|.+..
T Consensus 170 ~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 170 RKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred HHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 77777789999999999999999999999999999999987654
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.86 E-value=6e-21 Score=149.62 Aligned_cols=106 Identities=18% Similarity=0.303 Sum_probs=95.2
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc-CCCeEEEeeC
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI-KRPMILVGPS 99 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 99 (216)
+++|+|||+||++++...|.++.+.|.+.||+|+++|+||||.|.......++++++++++.++++++. .++++|+|||
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS 95 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHS 95 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 567899999999999999999999999889999999999999875432234799999999999999984 5789999999
Q ss_pred hhHHHHHHHHHhCccccceEEEEcccc
Q 027952 100 LGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 100 ~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
|||.++..++.++|++++++|++++..
T Consensus 96 ~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 96 AGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred chHHHHHHHHHhChhheeEEEEecccc
Confidence 999999999999999999999998854
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.86 E-value=2e-20 Score=146.38 Aligned_cols=120 Identities=18% Similarity=0.201 Sum_probs=96.4
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcc-hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCC--CCChhhHHHHH
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCL-EWRCTYPLLEEAGLETWAVDILGWGFSDLERLP--PCNVTSKREHF 81 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~ 81 (216)
.+++.+.+.... ..+.+++||++||+.++.. .|..+...+.+.||+|+++|+||||.|+.+... .++++++++++
T Consensus 9 ~~~~~~~~~~~~--~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 86 (288)
T TIGR01250 9 VDGGYHLFTKTG--GEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDEL 86 (288)
T ss_pred CCCCeEEEEecc--CCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHH
Confidence 344555443332 2344689999999866554 456666677766899999999999999865322 37899999999
Q ss_pred HHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 82 YQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 82 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
.++++++..++++++||||||.+++.+|.++|++++++|++++..
T Consensus 87 ~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 87 EEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 999999988889999999999999999999999999999998754
No 34
>PRK07581 hypothetical protein; Validated
Probab=99.86 E-value=7.2e-21 Score=153.68 Aligned_cols=122 Identities=16% Similarity=0.202 Sum_probs=88.0
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhh---hHHHhCCCeEEEEcCCCCCCCCCCCC--CCCChhh----
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTY---PLLEEAGLETWAVDILGWGFSDLERL--PPCNVTS---- 76 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~G~s~~~~~--~~~~~~~---- 76 (216)
++.++.+....+...+++|+||++||++++...|..++ +.|...+|+|+++|+||||.|+.+.. ..+++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 103 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHV 103 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCce
Confidence 34445555443222234466777788887777776443 46765569999999999999976531 2344443
Q ss_pred -HHHHHHH----HHHHhcCCC-eEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 77 -KREHFYQ----LWKTYIKRP-MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 77 -~~~~~~~----~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+++++.. ++++++.++ .+|+||||||++|+.+|.+||++|+++|++++...
T Consensus 104 ~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 104 TIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred eHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 4566654 667788888 57999999999999999999999999999987653
No 35
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.86 E-value=2e-20 Score=144.96 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=100.0
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCCCc----chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHH
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSC----LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 79 (216)
+.+.+.++..++.|...+.+++||++||+++.. ..|..+++.|++.||.|+++|+||||+|+... ...+++.+++
T Consensus 6 ~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~-~~~~~~~~~~ 84 (266)
T TIGR03101 6 DAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF-AAARWDVWKE 84 (266)
T ss_pred cCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc-ccCCHHHHHH
Confidence 445666788788775555568899999998643 45777889999999999999999999997643 3457788888
Q ss_pred HHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 80 HFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 80 ~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++...++.+ ...+++++||||||.+++.+|.++|+.++++|+++|...
T Consensus 85 Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 85 DVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 877765544 567899999999999999999999999999999998653
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=3e-20 Score=151.60 Aligned_cols=106 Identities=25% Similarity=0.370 Sum_probs=96.0
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeC
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPS 99 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 99 (216)
.+++++||++||++++...|..+.+.|.+. |+|+++|+||||.|... ...++++++++++.++++.++..+++++|||
T Consensus 128 ~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S 205 (371)
T PRK14875 128 EGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKA-VGAGSLDELAAAVLAFLDALGIERAHLVGHS 205 (371)
T ss_pred CCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCC-CCCCCHHHHHHHHHHHHHhcCCccEEEEeec
Confidence 355789999999999999999999999887 99999999999999654 2467899999999999999988889999999
Q ss_pred hhHHHHHHHHHhCccccceEEEEccccc
Q 027952 100 LGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 100 ~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+||.+++.+|.++|+++.++|++++...
T Consensus 206 ~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 206 MGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred hHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 9999999999999999999999998653
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.84 E-value=1.3e-20 Score=137.54 Aligned_cols=105 Identities=23% Similarity=0.272 Sum_probs=92.6
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---cCCCeEEEe
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---IKRPMILVG 97 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 97 (216)
+++.+|+|+||+.|+....+.+.+.|.++||.|++|.+||||..... ....+.++|.+++.+-.+++ +.+.+.++|
T Consensus 13 ~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~G 91 (243)
T COG1647 13 GGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVG 91 (243)
T ss_pred cCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 34489999999999999999999999999999999999999977643 35578888888888777776 677899999
Q ss_pred eChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 98 PSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 98 ~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
.||||.+++.+|.++| ++++|.++++...
T Consensus 92 lSmGGv~alkla~~~p--~K~iv~m~a~~~~ 120 (243)
T COG1647 92 LSMGGVFALKLAYHYP--PKKIVPMCAPVNV 120 (243)
T ss_pred ecchhHHHHHHHhhCC--ccceeeecCCccc
Confidence 9999999999999999 8999999998753
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.84 E-value=1.6e-20 Score=175.64 Aligned_cols=104 Identities=26% Similarity=0.407 Sum_probs=94.3
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-------CCCCChhhHHHHHHHHHHHhcCCCeE
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-------LPPCNVTSKREHFYQLWKTYIKRPMI 94 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (216)
++++|||+||++++...|.++.+.|.+. |+|+++|+||||.|+... ...++++++++++..+++++..++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999999999876 999999999999987532 23578999999999999999888999
Q ss_pred EEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 95 LVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 95 l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
|+||||||.+++.+|.++|++++++|++++..
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 99999999999999999999999999998754
No 39
>PLN02511 hydrolase
Probab=99.84 E-value=1.8e-20 Score=153.58 Aligned_cols=120 Identities=17% Similarity=0.178 Sum_probs=90.8
Q ss_pred CcceEEEeeeccC---CCCCCCcEEEEcCCCCCcch-H-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH
Q 027952 6 SESCIMSSVVKPL---KPSKTSPVVLLHGFDSSCLE-W-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH 80 (216)
Q Consensus 6 ~~~~i~~~~~~~~---~~~~~~~lv~~hG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 80 (216)
+++.+...+..+. ....+|+||++||++++... | ..++..+.+.||+|+++|+||||.|+... .......++++
T Consensus 80 DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-~~~~~~~~~~D 158 (388)
T PLN02511 80 DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-PQFYSASFTGD 158 (388)
T ss_pred CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-cCEEcCCchHH
Confidence 5566665665431 23457889999999877643 4 56778888889999999999999997543 22223456667
Q ss_pred HHHHHHHhc----CCCeEEEeeChhHHHHHHHHHhCccc--cceEEEEcccc
Q 027952 81 FYQLWKTYI----KRPMILVGPSLGAAVAVDFAVNHPEA--VENLVFIDASV 126 (216)
Q Consensus 81 ~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~~~--~~~lvli~~~~ 126 (216)
+.++++++. ..+++++||||||++++.++.+++++ +.++|+++++.
T Consensus 159 l~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 159 LRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 777777763 36899999999999999999999987 88999888765
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=2.1e-20 Score=149.17 Aligned_cols=108 Identities=40% Similarity=0.637 Sum_probs=96.2
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCC-CCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWG-FSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
..+++||++||++++...|+.....|.+. |+.|+++|++|+| .|+.+....|+..++++.+..+.......+++++||
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvgh 135 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGH 135 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEe
Confidence 46899999999999999999999999877 5899999999999 455555566999999999999999998888999999
Q ss_pred ChhHHHHHHHHHhCccccceEE---EEcccccc
Q 027952 99 SLGAAVAVDFAVNHPEAVENLV---FIDASVYA 128 (216)
Q Consensus 99 S~Gg~~a~~~a~~~~~~~~~lv---li~~~~~~ 128 (216)
|+||.+|+.+|+.+|+.|+++| +++++...
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeeccccccccc
Confidence 9999999999999999999999 55565543
No 41
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.81 E-value=2.9e-19 Score=144.96 Aligned_cols=123 Identities=17% Similarity=0.285 Sum_probs=97.6
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcc-----------hHHhhh---hHHHhCCCeEEEEcCCC--CCCCCCCC-
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCL-----------EWRCTY---PLLEEAGLETWAVDILG--WGFSDLER- 68 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~g--~G~s~~~~- 68 (216)
++.++.+..+.+.....+++||++||++++.. .|+.+. ..|...+|+|+++|+|| ||.|...+
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 45667777665432344679999999999763 477765 35655669999999999 55554311
Q ss_pred ----------CCCCChhhHHHHHHHHHHHhcCCC-eEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 69 ----------LPPCNVTSKREHFYQLWKTYIKRP-MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 69 ----------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
...++++++++++.+++++++.++ ++++||||||++++.+|.++|++++++|++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 125789999999999999998888 999999999999999999999999999999987643
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.81 E-value=4e-19 Score=142.65 Aligned_cols=122 Identities=15% Similarity=0.159 Sum_probs=85.7
Q ss_pred CcceEEEeeec-cCCCCCCCcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCC---ChhhHHH
Q 027952 6 SESCIMSSVVK-PLKPSKTSPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPC---NVTSKRE 79 (216)
Q Consensus 6 ~~~~i~~~~~~-~~~~~~~~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~---~~~~~~~ 79 (216)
+++.+...+.. +.....+|+||++||++++... +..+++.|.++||+|+++|+||||.+.......+ ..++...
T Consensus 40 dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~ 119 (324)
T PRK10985 40 DGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARF 119 (324)
T ss_pred CCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHH
Confidence 44444444432 2223457899999999987543 4678999999999999999999997754321122 2344433
Q ss_pred HHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccc--cceEEEEccccc
Q 027952 80 HFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA--VENLVFIDASVY 127 (216)
Q Consensus 80 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~--~~~lvli~~~~~ 127 (216)
.+..+.++++..+++++||||||.++..+++++++. +.++|+++++..
T Consensus 120 ~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 120 FLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 344444444667899999999999999998887543 899999998764
No 43
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=3.8e-19 Score=143.84 Aligned_cols=115 Identities=23% Similarity=0.272 Sum_probs=90.5
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcc------------hHHhhhh---HHHhCCCeEEEEcCCCCCCCCCCCCC
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCL------------EWRCTYP---LLEEAGLETWAVDILGWGFSDLERLP 70 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~g~G~s~~~~~~ 70 (216)
++.++++.... ..++++|++||+.++.. .|.++.. .|...+|+|+++|+||||.|.. .
T Consensus 44 ~~~~l~y~~~G----~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~ 116 (343)
T PRK08775 44 EDLRLRYELIG----PAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---V 116 (343)
T ss_pred CCceEEEEEec----cCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---C
Confidence 44555555432 12456777777666554 6888886 5743349999999999998843 3
Q ss_pred CCChhhHHHHHHHHHHHhcCCC-eEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 71 PCNVTSKREHFYQLWKTYIKRP-MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
.++.+++++++.+++++++.++ ++++||||||++|+.+|.++|++|+++|++++...
T Consensus 117 ~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 117 PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 5788999999999999998766 47999999999999999999999999999998753
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.79 E-value=2e-18 Score=137.51 Aligned_cols=118 Identities=20% Similarity=0.214 Sum_probs=93.2
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQL 84 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~ 84 (216)
++.++++... +..++++||++||+.++...+ .+...+...+|+|+++|+||||.|+.+. ...++.+++++++..+
T Consensus 13 ~~~~l~y~~~---g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l 88 (306)
T TIGR01249 13 DNHQLYYEQS---GNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKL 88 (306)
T ss_pred CCcEEEEEEC---cCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 3455555443 223467899999987775543 3444454456999999999999998653 2346788999999999
Q ss_pred HHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 85 WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 85 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 89 ~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 89 REKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 9999888899999999999999999999999999999988653
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=1.9e-18 Score=141.51 Aligned_cols=122 Identities=16% Similarity=0.210 Sum_probs=93.9
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcch-------------HHhhhh---HHHhCCCeEEEEcCCCC-CCCCCCC
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE-------------WRCTYP---LLEEAGLETWAVDILGW-GFSDLER 68 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~g~-G~s~~~~ 68 (216)
++.++.|..+...+++.+|+||++||++++... |..++. .|-..+|+|+++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 444555555542223346899999999999874 565542 44234599999999993 5443221
Q ss_pred -------------CCCCChhhHHHHHHHHHHHhcCCC-eEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 69 -------------LPPCNVTSKREHFYQLWKTYIKRP-MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 69 -------------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
...|+++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 125899999999999999998888 59999999999999999999999999999998764
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.78 E-value=3.9e-18 Score=137.21 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=97.0
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcch-H-------------------------HhhhhHHHhCCCeEEEEc
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE-W-------------------------RCTYPLLEEAGLETWAVD 57 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~-~-------------------------~~~~~~l~~~g~~v~~~d 57 (216)
+.++..+.+..+.|. ..+.+|+++||++++... + ..+++.|.+.||.|+++|
T Consensus 4 ~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 4 NKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred CCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 456778888888764 345799999999998861 1 357899999999999999
Q ss_pred CCCCCCCCCCC---CCCCChhhHHHHHHHHHHHhc------------------------CCCeEEEeeChhHHHHHHHHH
Q 027952 58 ILGWGFSDLER---LPPCNVTSKREHFYQLWKTYI------------------------KRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 58 ~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+||||.|+... ....+++++++++.++++... ..+++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 99999987542 122478999999998887641 357999999999999999987
Q ss_pred hCcc--------ccceEEEEccccc
Q 027952 111 NHPE--------AVENLVFIDASVY 127 (216)
Q Consensus 111 ~~~~--------~~~~lvli~~~~~ 127 (216)
++++ .++++|+++|...
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HhccccccccccccceEEEeccceE
Confidence 6542 5899999898763
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.76 E-value=5.6e-19 Score=127.29 Aligned_cols=178 Identities=16% Similarity=0.127 Sum_probs=121.0
Q ss_pred CCCCcEEEEcCCCCCcc-hHHhhhhHHHhCC-CeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHhcCCCeEEE
Q 027952 21 SKTSPVVLLHGFDSSCL-EWRCTYPLLEEAG-LETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTYIKRPMILV 96 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~-~~~~~~~~l~~~g-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (216)
.+...|++++|..|+.. .|.+....|.+.- ++|+++|.||+|.|.++. ++...+..-+++..++++++...++.++
T Consensus 40 ~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvl 119 (277)
T KOG2984|consen 40 HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVL 119 (277)
T ss_pred CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEe
Confidence 34467889999876664 6888888776653 899999999999998774 3334566677788899999999999999
Q ss_pred eeChhHHHHHHHHHhCccccceEEEEccccccCCCCCCCCchhhHHhhhhhhhhcchhhHHHHHhhhcccccccchhhhh
Q 027952 97 GPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTGNSAKLPSIIAYAGVYLLRSIPVRLYASILALNHTSFSTIIDWTN 176 (216)
Q Consensus 97 G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (216)
|+|-||..++..|+++++.|+++|++++........ .+...-++.. ..++....+.+.+..-
T Consensus 120 GWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~----------~ma~kgiRdv--------~kWs~r~R~P~e~~Yg 181 (277)
T KOG2984|consen 120 GWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLG----------AMAFKGIRDV--------NKWSARGRQPYEDHYG 181 (277)
T ss_pred eecCCCeEEEEeeccChhhhhhheeecccceecchh----------HHHHhchHHH--------hhhhhhhcchHHHhcC
Confidence 999999999999999999999999999987543211 1111111111 1111111122222222
Q ss_pred cccccccccchhhhhhHhhhcCcccc-cccccccccccccC
Q 027952 177 IGRLHCLYPWWEDATVSFMVSGGYNV-STQIEQVCINAFFI 216 (216)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~Lii 216 (216)
.......+..|.+..-++....+.++ ...|++|+|||||+
T Consensus 182 ~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~ 222 (277)
T KOG2984|consen 182 PETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIM 222 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEe
Confidence 22333444556666666655544444 56799999999985
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.75 E-value=1.9e-17 Score=136.58 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=95.9
Q ss_pred CCCCCcc-eEEEeeeccCCCCCCCcEEEEcCCCCCc-chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHH
Q 027952 2 QVNFSES-CIMSSVVKPLKPSKTSPVVLLHGFDSSC-LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79 (216)
Q Consensus 2 ~~~~~~~-~i~~~~~~~~~~~~~~~lv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 79 (216)
.++++++ .+...++.|...++.|+||+.||+++.. +.|..+.+.|.++||.|+++|+||+|.|.... ...+.+....
T Consensus 172 ~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~~~~~ 250 (414)
T PRK05077 172 EFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSSLLHQ 250 (414)
T ss_pred EEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHHHHHH
Confidence 3455566 7777777886445567777777777664 56888899999999999999999999986532 2234444555
Q ss_pred HHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 80 HFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 80 ~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
.+.+.+... +.+++.++||||||.+++++|..+|++++++|+++++.
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 566666554 45789999999999999999999999999999999875
No 49
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.72 E-value=1.1e-16 Score=120.86 Aligned_cols=105 Identities=29% Similarity=0.394 Sum_probs=91.6
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---cCCCeEE
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---IKRPMIL 95 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 95 (216)
...+|.+++.||.|.+.-.|..++.++... ..+|+++|+||||++.-.+..+.+.+.+++|+-++++.+ ...+++|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 457899999999999999999999988765 467888999999999876667789999999999999998 4568999
Q ss_pred EeeChhHHHHHHHHHh--CccccceEEEEccc
Q 027952 96 VGPSLGAAVAVDFAVN--HPEAVENLVFIDAS 125 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~--~~~~~~~lvli~~~ 125 (216)
+||||||.+|.+.|.. -|. +.+++.|+-.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999999885 366 8999999864
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.72 E-value=6e-17 Score=139.41 Aligned_cols=117 Identities=15% Similarity=0.237 Sum_probs=93.1
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHH
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFY 82 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~ 82 (216)
..++.++.+..+. .+++|+|||+||++++...|+++.+.|.+ +|+|+++|+||||.|+.+. ...++.+++++++.
T Consensus 9 ~~~g~~l~~~~~g---~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 9 SSDGVRLAVYEWG---DPDRPTVVLVHGYPDNHEVWDGVAPLLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred eeCCEEEEEEEcC---CCCCCeEEEEcCCCchHHHHHHHHHHhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 3456666665543 24578999999999999999999999954 5999999999999998643 34689999999999
Q ss_pred HHHHHhcCC-CeEEEeeChhHHHHHHHHHhC--ccccceEEEEcc
Q 027952 83 QLWKTYIKR-PMILVGPSLGAAVAVDFAVNH--PEAVENLVFIDA 124 (216)
Q Consensus 83 ~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~--~~~~~~lvli~~ 124 (216)
++++++... +++|+||||||.+++.++.+. ++++..++.+++
T Consensus 85 ~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 85 AVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 999998654 499999999999999888763 445555555443
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.70 E-value=4.5e-16 Score=122.15 Aligned_cols=119 Identities=19% Similarity=0.180 Sum_probs=91.4
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCC----CcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHH
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDS----SCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE 79 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 79 (216)
+.++..+...+..|.+. +++++|++||... +...|..+++.|+++||.|+++|+||||.|+.. ..+++++.+
T Consensus 8 ~~~~~~l~g~~~~p~~~-~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~ 83 (274)
T TIGR03100 8 SCEGETLVGVLHIPGAS-HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDA 83 (274)
T ss_pred EcCCcEEEEEEEcCCCC-CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHH
Confidence 44566677777777543 4567887887553 334567789999999999999999999998753 246677777
Q ss_pred HHHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 80 HFYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 80 ~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++.+.++.+ +.++++++||||||.+++.+|..+ ++++++|+++|...
T Consensus 84 d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~~~ 135 (274)
T TIGR03100 84 DIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCccC
Confidence 777777776 346799999999999999998754 57999999998653
No 52
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.70 E-value=3.5e-16 Score=127.80 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=92.9
Q ss_pred ceEEEeeeccCCCCCCCcEEEEcCCCCCcc-------------hHHhhh---hHHHhCCCeEEEEcCCCCCCCCC-----
Q 027952 8 SCIMSSVVKPLKPSKTSPVVLLHGFDSSCL-------------EWRCTY---PLLEEAGLETWAVDILGWGFSDL----- 66 (216)
Q Consensus 8 ~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d~~g~G~s~~----- 66 (216)
-++.|..+...+..+.++||++|++.++.. .|..+. ..|.-.-|.|+++|..|-+.|..
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 345566665545556789999999998652 254433 23433349999999998654211
Q ss_pred -------C--------CCCCCChhhHHHHHHHHHHHhcCCCeE-EEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 67 -------E--------RLPPCNVTSKREHFYQLWKTYIKRPMI-LVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 67 -------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
+ +++.++++++++++.+++++++.++++ ++||||||++++.+|.++|++++++|++++....
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 1 134589999999999999999888886 9999999999999999999999999999987643
No 53
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.70 E-value=3.5e-16 Score=121.32 Aligned_cols=123 Identities=19% Similarity=0.166 Sum_probs=87.7
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCCCCCC---CCCCChhhHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFSDLER---LPPCNVTSKREH 80 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~ 80 (216)
+++.+...+..+......|.||++||+.|+..+ -+.+.+.+.++||.+++++.|||+++.... ......+|.+..
T Consensus 58 dg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~ 137 (345)
T COG0429 58 DGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFF 137 (345)
T ss_pred CCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHH
Confidence 556666666665555667999999999987754 466889999999999999999999876532 223344566655
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc--cccceEEEEcccccc
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP--EAVENLVFIDASVYA 128 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~~lvli~~~~~~ 128 (216)
+..+.+.....++..+|.|+||.....|..+.. -.+++.+.++.+...
T Consensus 138 l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 138 LDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred HHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 555555557889999999999955555544432 236777777776543
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.70 E-value=5.3e-16 Score=121.37 Aligned_cols=119 Identities=16% Similarity=0.154 Sum_probs=87.8
Q ss_pred CcceEEEeeeccC--CCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC-CCCCCCCCCCCChhhHHHHHH
Q 027952 6 SESCIMSSVVKPL--KPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW-GFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 6 ~~~~i~~~~~~~~--~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~ 82 (216)
++..+..-+..|. ...+.++||++||++++...+..+++.|.++||.|+.+|.+|+ |.|+... ...+.....+|+.
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~-~~~t~s~g~~Dl~ 96 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI-DEFTMSIGKNSLL 96 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc-ccCcccccHHHHH
Confidence 3444555555553 2234588999999999887789999999999999999999988 8897642 2333333455554
Q ss_pred HHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 83 QLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 83 ~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
..++.+ ...++.|+||||||.+|+..|...+ ++++|+.+|...
T Consensus 97 aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~ 142 (307)
T PRK13604 97 TVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCccc
Confidence 444444 5568999999999999977776443 899999888764
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.68 E-value=1.7e-15 Score=127.47 Aligned_cols=118 Identities=9% Similarity=0.090 Sum_probs=89.7
Q ss_pred eeeccCCCC-CCCcEEEEcCCCCCcchHH-----hhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHH
Q 027952 13 SVVKPLKPS-KTSPVVLLHGFDSSCLEWR-----CTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLW 85 (216)
Q Consensus 13 ~~~~~~~~~-~~~~lv~~hG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~ 85 (216)
..+.|.++. .++|||++||+......|+ .+++.|.++||+|+++|++|+|.+.... ...|..+.+.+.+..+.
T Consensus 177 i~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~ 256 (532)
T TIGR01838 177 IQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVE 256 (532)
T ss_pred EEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHH
Confidence 344554443 5799999999987777664 6999999999999999999999886532 23444455666677776
Q ss_pred HHhcCCCeEEEeeChhHHHHH----HHHHhC-ccccceEEEEccccccCC
Q 027952 86 KTYIKRPMILVGPSLGAAVAV----DFAVNH-PEAVENLVFIDASVYAEG 130 (216)
Q Consensus 86 ~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-~~~~~~lvli~~~~~~~~ 130 (216)
+..+.++++++||||||.++. .+++.+ +++++++++++++.....
T Consensus 257 ~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 257 AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC
Confidence 666888999999999999852 355555 788999999999875443
No 56
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=3.9e-15 Score=119.31 Aligned_cols=122 Identities=18% Similarity=0.197 Sum_probs=94.0
Q ss_pred CCcceEEEeeeccCCC------CCCCcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCCCCCC---CCCCC
Q 027952 5 FSESCIMSSVVKPLKP------SKTSPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFSDLER---LPPCN 73 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~------~~~~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~ 73 (216)
.+|+.+..++..+... +..|++|++||+.+++.. .+.++..+.+.||++++++.||+|+|...+ ....+
T Consensus 101 ~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~ 180 (409)
T KOG1838|consen 101 SDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGW 180 (409)
T ss_pred CCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCC
Confidence 4788888888865333 456999999999876653 467888999999999999999999998654 33446
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccc--cceEEEEcccc
Q 027952 74 VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA--VENLVFIDASV 126 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~--~~~lvli~~~~ 126 (216)
.+|..+.+..+.+.++..+...+|.||||++.+.|..+-.+. +.+.+.++.+.
T Consensus 181 t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 667776666666666888999999999999999999975432 55556656554
No 57
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.64 E-value=5.2e-15 Score=121.41 Aligned_cols=104 Identities=18% Similarity=0.154 Sum_probs=82.6
Q ss_pred CCCcEEEEcCCCCCc--chHHh-hhhHHHhC--CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh------cC
Q 027952 22 KTSPVVLLHGFDSSC--LEWRC-TYPLLEEA--GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY------IK 90 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~--~~~~~-~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~ 90 (216)
.+|++|++||++++. ..|.+ +.+.|.+. .++|+++|++|+|.+..+. ........++++.++++.+ ..
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~-a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT-SAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc-ccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 579999999998754 45765 66666432 4999999999999886543 2234466667777777765 36
Q ss_pred CCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 91 RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
++++|+||||||.+|..++.++|++|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 799999999999999999999999999999999975
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.63 E-value=3.3e-15 Score=110.93 Aligned_cols=89 Identities=24% Similarity=0.224 Sum_probs=75.5
Q ss_pred CcEEEEcCCCCCcchHHh--hhhHHHhC--CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeC
Q 027952 24 SPVVLLHGFDSSCLEWRC--TYPLLEEA--GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPS 99 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~--~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 99 (216)
|+||++||++++...|+. +.+.|.+. +|+++++|+||++ ++.++++.+++++++.++++++|+|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 689999999999999974 44666553 5999999999984 3588899999999888899999999
Q ss_pred hhHHHHHHHHHhCccccceEEEEccccc
Q 027952 100 LGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 100 ~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|||.+++.+|.++|. ++|+++|+..
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999983 4788888653
No 59
>PRK10566 esterase; Provisional
Probab=99.62 E-value=5.5e-15 Score=114.26 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=74.6
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCCh-------hhHHHHHHHHHHHh-----
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNV-------TSKREHFYQLWKTY----- 88 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~-------~~~~~~~~~~~~~~----- 88 (216)
+..|+||++||++++...|..+++.|.+.||.|+++|+||||.+.... ..... ....+++.++++.+
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGD-EARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCc-cccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 346899999999999988999999999999999999999999763221 11111 11233333333332
Q ss_pred -cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 89 -IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 89 -~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
..++++++|||+||.+++.++.++|+....++++++
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 346899999999999999999998874444445443
No 60
>PLN00021 chlorophyllase
Probab=99.62 E-value=5e-15 Score=117.75 Aligned_cols=117 Identities=14% Similarity=0.061 Sum_probs=86.1
Q ss_pred eEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh
Q 027952 9 CIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 9 ~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 88 (216)
.+....+.|...++.|+||++||++++...|..+++.|+++||.|+++|++|++.+... ....+..+..+++.+.++.+
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~-~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT-DEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch-hhHHHHHHHHHHHHhhhhhh
Confidence 34555667766677799999999999999999999999999999999999987543211 11112223333333332221
Q ss_pred -------cCCCeEEEeeChhHHHHHHHHHhCcc-----ccceEEEEcccc
Q 027952 89 -------IKRPMILVGPSLGAAVAVDFAVNHPE-----AVENLVFIDASV 126 (216)
Q Consensus 89 -------~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~~~~lvli~~~~ 126 (216)
+.++++++||||||.+++.+|.++++ +++++|+++|..
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 33679999999999999999998874 589999999854
No 61
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.62 E-value=2.6e-15 Score=94.98 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=70.5
Q ss_pred cceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 027952 7 ESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWK 86 (216)
Q Consensus 7 ~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 86 (216)
|.++++..|.|..+ .+.+|+++||++++...|..+++.|+++||.|+++|+||||.|+.......+++++++|+.++++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 45788999998655 68899999999999999999999999999999999999999999766666789999999998864
No 62
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.2e-14 Score=112.91 Aligned_cols=109 Identities=26% Similarity=0.369 Sum_probs=96.7
Q ss_pred cCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc----CC
Q 027952 17 PLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI----KR 91 (216)
Q Consensus 17 ~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 91 (216)
..+....|+++++||+.|+...|+.+...|++. +..++++|.|-||.|+.. ...+.+++++++..|++... ..
T Consensus 46 ~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~--~~h~~~~ma~dv~~Fi~~v~~~~~~~ 123 (315)
T KOG2382|consen 46 SENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI--TVHNYEAMAEDVKLFIDGVGGSTRLD 123 (315)
T ss_pred ccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc--cccCHHHHHHHHHHHHHHcccccccC
Confidence 334567899999999999999999999999877 788999999999999775 45679999999999999983 56
Q ss_pred CeEEEeeChhH-HHHHHHHHhCccccceEEEEccccc
Q 027952 92 PMILVGPSLGA-AVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 92 ~~~l~G~S~Gg-~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++.|+|||||| .+++..+...|+.+.++|+++.++.
T Consensus 124 ~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 124 PVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred CceecccCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 89999999999 8888888899999999999998774
No 63
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.59 E-value=8.3e-15 Score=118.90 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=82.4
Q ss_pred CCCCcEEEEcCCCCCcch-----HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH-HHHHHH----HhcC
Q 027952 21 SKTSPVVLLHGFDSSCLE-----WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH-FYQLWK----TYIK 90 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~-~~~~~~----~~~~ 90 (216)
..+++||++||+..+... ++.+++.|.++||+|+++|++|+|.++. ..++++++.+ +.+.++ ..+.
T Consensus 60 ~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 60 THKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 345689999998654443 4679999999999999999999987753 3466666543 444343 3466
Q ss_pred CCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 91 RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
++++++||||||.+++.+++++|++++++|+++++...
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 78999999999999999999999999999999997754
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.59 E-value=6e-14 Score=127.53 Aligned_cols=104 Identities=24% Similarity=0.346 Sum_probs=82.7
Q ss_pred CCCCcEEEEcCCCCCcchHHhh-----hhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHH---hcCC
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCT-----YPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKT---YIKR 91 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~---~~~~ 91 (216)
..++|||++||+..+...|+.. .+.|.++||+|+++| +|.++.+. ....++.+++..+.+.++. ...+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 4679999999999999999865 789999999999999 46665542 1235777777666666655 2446
Q ss_pred CeEEEeeChhHHHHHHHHHhC-ccccceEEEEccccc
Q 027952 92 PMILVGPSLGAAVAVDFAVNH-PEAVENLVFIDASVY 127 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~-~~~~~~lvli~~~~~ 127 (216)
+++++||||||.+++.+|+.+ +++|+++|+++++..
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 899999999999999998754 568999999998763
No 65
>PLN02872 triacylglycerol lipase
Probab=99.58 E-value=6.7e-15 Score=120.43 Aligned_cols=126 Identities=15% Similarity=0.244 Sum_probs=93.4
Q ss_pred CCCcceEEEeeeccCC-----CCCCCcEEEEcCCCCCcchHH------hhhhHHHhCCCeEEEEcCCCCCCCCCCC----
Q 027952 4 NFSESCIMSSVVKPLK-----PSKTSPVVLLHGFDSSCLEWR------CTYPLLEEAGLETWAVDILGWGFSDLER---- 68 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~-----~~~~~~lv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~g~G~s~~~~---- 68 (216)
.++++-+......|.. ...+|+|+++||+.++...|. .++..|+++||+|+++|.||++.|....
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~ 129 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSE 129 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCc
Confidence 3455555555554422 124689999999998888873 3556789999999999999988663211
Q ss_pred ----CCCCChhhHH-HHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCcc---ccceEEEEccccccCC
Q 027952 69 ----LPPCNVTSKR-EHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPE---AVENLVFIDASVYAEG 130 (216)
Q Consensus 69 ----~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~---~~~~lvli~~~~~~~~ 130 (216)
.-.+++++++ .|+.++++.. ..++++++||||||.+++.++ .+|+ .|+.+++++|......
T Consensus 130 ~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 130 KDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred cchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 1146788888 7999999886 347899999999999998555 5665 6889999999876543
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.58 E-value=1.4e-14 Score=113.53 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=79.0
Q ss_pred CCCCcEEEEcCCCCCc-chHHh-hhhHH-HhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh------cCC
Q 027952 21 SKTSPVVLLHGFDSSC-LEWRC-TYPLL-EEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY------IKR 91 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~-~~~~~-~~~~l-~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 91 (216)
.++|++|++||++++. ..|.. +.+.+ .+.+++|+++|+++++.+..+ ....+....++++.++++.+ ..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4578999999999887 56754 44444 445699999999988433211 12234455556666666654 346
Q ss_pred CeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 92 PMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+++++||||||.+|..++.++|+++.++++++|+..
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 899999999999999999999999999999998753
No 67
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.56 E-value=1.5e-14 Score=109.71 Aligned_cols=75 Identities=25% Similarity=0.463 Sum_probs=70.7
Q ss_pred CeEEEEcCCCCCCCCC---CCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccc
Q 027952 51 LETWAVDILGWGFSDL---ERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 51 ~~v~~~d~~g~G~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
|+|+++|+||+|.|++ .....++.+++++++..++++++.++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999996 44678999999999999999999888999999999999999999999999999999996
No 68
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.55 E-value=6.3e-14 Score=99.24 Aligned_cols=92 Identities=29% Similarity=0.364 Sum_probs=74.7
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHH-hcCCCeEEEeeChhHH
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT-YIKRPMILVGPSLGAA 103 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~ 103 (216)
+||++||++++...|..+++.|.++||.++.+|+|++|.+... ...++..+++. +. ...+++.++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----DAVERVLADIR---AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----HHHHHHHHHHH---HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----HHHHHHHHHHH---hhcCCCCcEEEEEEccCcH
Confidence 5899999999999999999999999999999999999877321 12222222221 21 2668999999999999
Q ss_pred HHHHHHHhCccccceEEEEcc
Q 027952 104 VAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 104 ~a~~~a~~~~~~~~~lvli~~ 124 (216)
++..++.++ .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 67999999999
No 69
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.54 E-value=5e-14 Score=113.72 Aligned_cols=124 Identities=19% Similarity=0.167 Sum_probs=88.7
Q ss_pred CCCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchH-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH
Q 027952 2 QVNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEW-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH 80 (216)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 80 (216)
.++++++.|...++.|.++++.|+||++-|+.+...++ ..+.+.|.++|+.++++|.||.|.|.... ...+.+...+.
T Consensus 169 ~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l~~D~~~l~~a 247 (411)
T PF06500_consen 169 EIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP-LTQDSSRLHQA 247 (411)
T ss_dssp EEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT--S-S-CCHHHHH
T ss_pred EEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC-CCcCHHHHHHH
Confidence 46788899999888888666668888888888888665 44557899999999999999999986432 12333455566
Q ss_pred HHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 81 FYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 81 ~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+.+.+... +..++.++|.|+||.+|.++|.-++++++++|..+++.
T Consensus 248 VLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 248 VLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 66666665 45689999999999999999998888999999999975
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.54 E-value=5.8e-14 Score=120.24 Aligned_cols=120 Identities=14% Similarity=0.077 Sum_probs=94.9
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcc---hH-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCL---EW-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH 80 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 80 (216)
.++.++.+..+.|...+..|+||++||++.+.. .+ ....+.|.++||.|+.+|.||+|.|+... ..++ ...++|
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~-~~~~-~~~~~D 81 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF-DLLG-SDEAAD 81 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce-EecC-cccchH
Confidence 366688888888876567799999999997653 22 23557888999999999999999998653 2222 456677
Q ss_pred HHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 81 FYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 81 ~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+.++++.+ ...++.++|+|+||.+++.+|..+|+.++++|..++..
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 77777766 23589999999999999999999999999999988765
No 71
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.54 E-value=2.8e-14 Score=109.80 Aligned_cols=123 Identities=14% Similarity=0.197 Sum_probs=80.9
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcch-HHhhh-----hHHHhCCCeEEEEcCCCCCCCCCC--C-CCCCChh
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE-WRCTY-----PLLEEAGLETWAVDILGWGFSDLE--R-LPPCNVT 75 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~g~G~s~~~--~-~~~~~~~ 75 (216)
+.-|.+...... ...+++|++|-.|-+|.+... +..+. +.+.++ |.++-+|.||+.+.... . ....+.+
T Consensus 6 t~~G~v~V~v~G-~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd 83 (283)
T PF03096_consen 6 TPYGSVHVTVQG-DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMD 83 (283)
T ss_dssp ETTEEEEEEEES-S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HH
T ss_pred cCceEEEEEEEe-cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHH
Confidence 333444443332 223468999999999988765 55544 466676 99999999999654332 2 2345899
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccC
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAE 129 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~ 129 (216)
+.++.+..++++++.+.++.+|...||.+..++|.+||++|.++|||++.....
T Consensus 84 ~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 84 QLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA 137 (283)
T ss_dssp HHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S--
T ss_pred HHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc
Confidence 999999999999999999999999999999999999999999999999987543
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.53 E-value=3.7e-13 Score=105.70 Aligned_cols=123 Identities=16% Similarity=0.137 Sum_probs=86.9
Q ss_pred CCcceEEEeeeccCC--CCCCCcEEEEcCCCCCcchHHh--hhhHH-HhCCCeEEEEcC--CCCCCCCCCC---------
Q 027952 5 FSESCIMSSVVKPLK--PSKTSPVVLLHGFDSSCLEWRC--TYPLL-EEAGLETWAVDI--LGWGFSDLER--------- 68 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~--~~~~~~lv~~hG~~~~~~~~~~--~~~~l-~~~g~~v~~~d~--~g~G~s~~~~--------- 68 (216)
..+....+..+.|.. .++.|+|+++||++++...|.. ....+ .+.|+.|+++|. +|+|.+....
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 344555666777743 3456899999999999888753 23344 456899999998 5554322100
Q ss_pred ----------CCCCChhh-HHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 69 ----------LPPCNVTS-KREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 69 ----------~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
...+...+ .++++..++++. ..+++.++||||||.+++.++.++|+.+++++++++...
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 01123333 356777777763 456899999999999999999999999999999988753
No 73
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.52 E-value=2.3e-13 Score=102.86 Aligned_cols=114 Identities=15% Similarity=0.121 Sum_probs=78.6
Q ss_pred eeccCC-CCCCCcEEEEcCCCCCcchHH---hhhhHHHhCCCeEEEEcCCCCCCCCCC-C---C-----CCCChhhHHHH
Q 027952 14 VVKPLK-PSKTSPVVLLHGFDSSCLEWR---CTYPLLEEAGLETWAVDILGWGFSDLE-R---L-----PPCNVTSKREH 80 (216)
Q Consensus 14 ~~~~~~-~~~~~~lv~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~G~s~~~-~---~-----~~~~~~~~~~~ 80 (216)
.+.|.+ .++.|+||++||.+++...+. .+.+.+.+.||.|+++|.+|++.+... . . ......+..+.
T Consensus 3 ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (212)
T TIGR01840 3 VYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQL 82 (212)
T ss_pred EEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHH
Confidence 344543 346789999999998877665 355555667999999999998754321 0 0 01112222233
Q ss_pred HHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 81 FYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 81 ~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+..+.+.. ..++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 33333333 335899999999999999999999999999999887653
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.52 E-value=9e-13 Score=100.57 Aligned_cols=106 Identities=25% Similarity=0.391 Sum_probs=96.7
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc-CCCeEEEeeChhH
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI-KRPMILVGPSLGA 102 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg 102 (216)
.+||-+||..|+..+++-+...|.+.|.+++.+++||+|.++......|+-++....+.++++.+. ..++.++|||.|+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 489999999999999999999999999999999999999999877778999999999999999994 5679999999999
Q ss_pred HHHHHHHHhCccccceEEEEccccccCCC
Q 027952 103 AVAVDFAVNHPEAVENLVFIDASVYAEGT 131 (216)
Q Consensus 103 ~~a~~~a~~~~~~~~~lvli~~~~~~~~~ 131 (216)
-.|+.+|..+| +.++++++|++.....
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~Hk 142 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHK 142 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCcccccc
Confidence 99999999996 6799999999875543
No 75
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.51 E-value=4.2e-13 Score=102.54 Aligned_cols=102 Identities=32% Similarity=0.517 Sum_probs=85.3
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCC--CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAG--LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
+++++++||+.++...|......+.... |+++.+|+||||.|. . . .+.....++++..+++++...+++++|||+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 97 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P-A-GYSLSAYADDLAALLDALGLEKVVLVGHSM 97 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c-c-cccHHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 5699999999999999887433333321 899999999999997 1 1 345555699999999999877799999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
||.++..++.++|+.++++|++++...
T Consensus 98 Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 98 GGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred cHHHHHHHHHhcchhhheeeEecCCCC
Confidence 999999999999999999999998753
No 76
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.50 E-value=9.1e-13 Score=100.53 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=91.5
Q ss_pred CCCCCcEEEEcCCCCCcch-HHhhh-----hHHHhCCCeEEEEcCCCCCCCCC--CC-CCCCChhhHHHHHHHHHHHhcC
Q 027952 20 PSKTSPVVLLHGFDSSCLE-WRCTY-----PLLEEAGLETWAVDILGWGFSDL--ER-LPPCNVTSKREHFYQLWKTYIK 90 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~g~G~s~~--~~-~~~~~~~~~~~~~~~~~~~~~~ 90 (216)
.+++|++|-.|.++.+... +..++ ..+.++ |.++.+|.|||-.... +. ....+.++.++++..+++++..
T Consensus 43 ~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~l 121 (326)
T KOG2931|consen 43 KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGL 121 (326)
T ss_pred CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 3468889999999988765 55443 577788 9999999999854322 22 2345899999999999999999
Q ss_pred CCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCC
Q 027952 91 RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~ 130 (216)
+.++-+|...|+.|..++|.+||++|.+||||++.....+
T Consensus 122 k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 122 KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG 161 (326)
T ss_pred ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch
Confidence 9999999999999999999999999999999999775433
No 77
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.49 E-value=5e-13 Score=116.19 Aligned_cols=90 Identities=20% Similarity=0.184 Sum_probs=75.9
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCC---------C--CCC-----------CChhhHHHH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLE---------R--LPP-----------CNVTSKREH 80 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~---------~--~~~-----------~~~~~~~~~ 80 (216)
.|+||++||++++...|..+++.|.++||+|+++|+||||.|... . ... .++.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999999999999999999999443 1 011 267888888
Q ss_pred HHHHHHHhc----------------CCCeEEEeeChhHHHHHHHHHhC
Q 027952 81 FYQLWKTYI----------------KRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 81 ~~~~~~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
+..+...+. ..+++++||||||.++..++...
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 888877775 34899999999999999999864
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.41 E-value=4.6e-12 Score=99.89 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=83.8
Q ss_pred cceEEEeeeccCC--CCCCCcEEEEcCCCCCcchHHh---hhhHHHhCCCeEEEEcCCCCCC-----CC------CCC--
Q 027952 7 ESCIMSSVVKPLK--PSKTSPVVLLHGFDSSCLEWRC---TYPLLEEAGLETWAVDILGWGF-----SD------LER-- 68 (216)
Q Consensus 7 ~~~i~~~~~~~~~--~~~~~~lv~~hG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~G~-----s~------~~~-- 68 (216)
+..+.+..+.|.. .++-|+|+++||+.++...|.. +.+.+...|+.|+.+|..++|. +. ...
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 4455666666642 2345899999999988877743 4467777799999999887661 10 000
Q ss_pred --C----------CCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 69 --L----------PPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 69 --~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
. ..+-.++....+.+..+.+..++++|+|+||||..|+.++.++|+++++++++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0 0111233333444444445667899999999999999999999999999999998653
No 79
>PRK10162 acetyl esterase; Provisional
Probab=99.38 E-value=6.1e-12 Score=100.81 Aligned_cols=122 Identities=15% Similarity=0.061 Sum_probs=85.9
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCC---CCcchHHhhhhHHHh-CCCeEEEEcCCCCCCCCCCCCCCCChhhHHH
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFD---SSCLEWRCTYPLLEE-AGLETWAVDILGWGFSDLERLPPCNVTSKRE 79 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 79 (216)
+..++.+....+.|.. ...|+||++||.+ ++...|..+++.|++ .|+.|+.+|+|...+...+. ...+..+..+
T Consensus 63 ~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~ 140 (318)
T PRK10162 63 PTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCC 140 (318)
T ss_pred ecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHH
Confidence 3444567777887743 3468899999977 667788889999987 48999999999765432221 1122333334
Q ss_pred HHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhC------ccccceEEEEccccc
Q 027952 80 HFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNH------PEAVENLVFIDASVY 127 (216)
Q Consensus 80 ~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~------~~~~~~lvli~~~~~ 127 (216)
++.+..+.+ ..++++|+|+|+||.+++.++.+. +..+.++|++.|...
T Consensus 141 ~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 141 YFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 444444444 346899999999999999998753 356899999998654
No 80
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.38 E-value=4.4e-12 Score=100.20 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=93.0
Q ss_pred cceEEEeeeccCCCCCCCcEEEEcCCCCCcchHH-------hhhhHHHhC-------CCeEEEEcCCCCC-CCCCCC---
Q 027952 7 ESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWR-------CTYPLLEEA-------GLETWAVDILGWG-FSDLER--- 68 (216)
Q Consensus 7 ~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~-------~~~~~l~~~-------g~~v~~~d~~g~G-~s~~~~--- 68 (216)
+-+|.+..+.-.+....++|+++|++.++..... .+++.+... -|.|++.|-.|.. .|+.+.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 3446666665545566789999999998665332 144444333 3899999999964 344332
Q ss_pred ---------CCCCChhhHHHHHHHHHHHhcCCCeE-EEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 69 ---------LPPCNVTSKREHFYQLWKTYIKRPMI-LVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 69 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
++.+++.|++..-..++++++.+++. ++|-||||+.++.++..||++|+++|.++++...
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 25578899999999999999888766 9999999999999999999999999999997743
No 81
>PRK11460 putative hydrolase; Provisional
Probab=99.34 E-value=1.5e-11 Score=94.15 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=72.6
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC----------CCCC---ChhhHHHHHHHHHH
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER----------LPPC---NVTSKREHFYQLWK 86 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~----------~~~~---~~~~~~~~~~~~~~ 86 (216)
....+.||++||++++...|.++++.|.+.++.+..++.+|...+.... .... ++.+..+.+.+.++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999998876566666666643221100 0001 12222233333333
Q ss_pred H----h--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccc
Q 027952 87 T----Y--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 87 ~----~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
. . ..++++++|+|+||.+++.++.++|+.+.++|.+++.
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 3 2 3357999999999999999999999888888877664
No 82
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.34 E-value=1.2e-11 Score=94.34 Aligned_cols=100 Identities=20% Similarity=0.332 Sum_probs=84.0
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCC-CeEEEeeChhH
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKR-PMILVGPSLGA 102 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg 102 (216)
++|+++|+.+|+...|.++++.|....+.|+.++.+|.+... ....+++++++...+.+...... ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 479999999999999999999998744899999999997332 24578999999999888887444 99999999999
Q ss_pred HHHHHHHHhC---ccccceEEEEcccc
Q 027952 103 AVAVDFAVNH---PEAVENLVFIDASV 126 (216)
Q Consensus 103 ~~a~~~a~~~---~~~~~~lvli~~~~ 126 (216)
.+|...|.+- ...+..++++++..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999863 34589999999754
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.34 E-value=8.8e-11 Score=98.58 Aligned_cols=113 Identities=9% Similarity=0.110 Sum_probs=89.2
Q ss_pred eeeccCCC-CCCCcEEEEcCCCCCcchH-----HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 027952 13 SVVKPLKP-SKTSPVVLLHGFDSSCLEW-----RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWK 86 (216)
Q Consensus 13 ~~~~~~~~-~~~~~lv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 86 (216)
..+.|.++ ..++|||+++.+--....+ +.+++.|.++||+|+.+|++.-+..+ ...+++++++.+.+.++
T Consensus 204 iqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald 279 (560)
T TIGR01839 204 IQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVD 279 (560)
T ss_pred EEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHH
Confidence 34455443 4578999999988544444 46999999999999999998755443 45688999988887777
Q ss_pred Hh----cCCCeEEEeeChhHHHHHH----HHHhCcc-ccceEEEEccccccC
Q 027952 87 TY----IKRPMILVGPSLGAAVAVD----FAVNHPE-AVENLVFIDASVYAE 129 (216)
Q Consensus 87 ~~----~~~~~~l~G~S~Gg~~a~~----~a~~~~~-~~~~lvli~~~~~~~ 129 (216)
.. +.++++++|+|+||.++.. +|+++++ +|++++++.++....
T Consensus 280 ~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 280 AVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 76 5678999999999999997 8888885 799999999977544
No 84
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.32 E-value=4e-11 Score=90.46 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=88.5
Q ss_pred CCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHH
Q 027952 5 FSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQ 83 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 83 (216)
..++.+...+++|. ....+++++.||...+....-.++..|..+ +++++.+|++|+|.|.....+ .+.-+-++.+-+
T Consensus 43 ~rgn~~~~~y~~~~-~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-~n~y~Di~avye 120 (258)
T KOG1552|consen 43 SRGNEIVCMYVRPP-EAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-RNLYADIKAVYE 120 (258)
T ss_pred CCCCEEEEEEEcCc-cccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-ccchhhHHHHHH
Confidence 45666777777763 234589999999977776555666777663 599999999999999876422 344444444444
Q ss_pred HHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 84 LWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 84 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
.+++. ..++++|+|+|+|...+..+|.+.| +.++||.+|..
T Consensus 121 ~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 121 WLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFT 163 (258)
T ss_pred HHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccch
Confidence 44444 3688999999999999999999998 99999999855
No 85
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.31 E-value=3.1e-11 Score=91.80 Aligned_cols=104 Identities=21% Similarity=0.258 Sum_probs=73.6
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHh--------CCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHH----h-
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEE--------AGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT----Y- 88 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~----~- 88 (216)
++.+|||+||.+|+...++.+...+.+ ..++++..|+...... .....+.+.++.+.+.++. +
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~----~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA----FHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc----cccccHHHHHHHHHHHHHHHHHhhh
Confidence 578999999999999988887766622 1478999998764322 1223344444444443333 3
Q ss_pred ----cCCCeEEEeeChhHHHHHHHHHhCc---cccceEEEEccccccC
Q 027952 89 ----IKRPMILVGPSLGAAVAVDFAVNHP---EAVENLVFIDASVYAE 129 (216)
Q Consensus 89 ----~~~~~~l~G~S~Gg~~a~~~a~~~~---~~~~~lvli~~~~~~~ 129 (216)
..++++|+||||||.+|-.++...+ +.|+.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 5678999999999999888877543 5799999999987543
No 86
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.26 E-value=4.1e-11 Score=91.63 Aligned_cols=113 Identities=19% Similarity=0.144 Sum_probs=83.4
Q ss_pred eeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----
Q 027952 13 SVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---- 88 (216)
Q Consensus 13 ~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---- 88 (216)
..+.|...+.=|.+||+||+......|..++++++.+||-|+.+|+...+..... .+.....+..+++.+=++..
T Consensus 7 ~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~-~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 7 LVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT-DEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred EEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc-hhHHHHHHHHHHHHhcchhhcccc
Confidence 3456666667799999999998888899999999999999999997665432111 12223334444443322222
Q ss_pred ---cCCCeEEEeeChhHHHHHHHHHhC-----ccccceEEEEcccc
Q 027952 89 ---IKRPMILVGPSLGAAVAVDFAVNH-----PEAVENLVFIDASV 126 (216)
Q Consensus 89 ---~~~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~~lvli~~~~ 126 (216)
+.+++.|.|||-||-+|+..+..+ +.+++++|+++|.-
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 345899999999999999999987 55799999999976
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=4.1e-10 Score=86.29 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=98.6
Q ss_pred CCCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC-CCCCCCC------CC----
Q 027952 2 QVNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW-GFSDLER------LP---- 70 (216)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~------~~---- 70 (216)
+++..+.++...+.+|...+..|.||++|+..|-....+.+++.|++.||.++++|+-+. |.+.... ..
T Consensus 6 ~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 6 TIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred EeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 456677888888899977766699999999999999999999999999999999999873 3322111 00
Q ss_pred CCChhhHHHHHHHHHHHh---c---CCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 71 PCNVTSKREHFYQLWKTY---I---KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
..+..+...++...++.+ . ..++.++|+||||.+++.++.+.| .+++.|...+....
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~ 148 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA 148 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC
Confidence 122356666777777776 2 456999999999999999999988 58999998887653
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.19 E-value=3.9e-10 Score=88.00 Aligned_cols=106 Identities=19% Similarity=0.229 Sum_probs=91.5
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhC---CCeEEEEcCCCCCCCCCC-----CCCCCChhhHHHHHHHHHHHhc-----
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEA---GLETWAVDILGWGFSDLE-----RLPPCNVTSKREHFYQLWKTYI----- 89 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~G~s~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 89 (216)
+..+++++|..|-.+.|..+++.|.+. .+.|++.++.||-.++.. ....++++++++...+++++..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 456899999999999999999988854 599999999999776654 3467899999999999998872
Q ss_pred -CCCeEEEeeChhHHHHHHHHHhCc---cccceEEEEcccccc
Q 027952 90 -KRPMILVGPSLGAAVAVDFAVNHP---EAVENLVFIDASVYA 128 (216)
Q Consensus 90 -~~~~~l~G~S~Gg~~a~~~a~~~~---~~~~~lvli~~~~~~ 128 (216)
..+++|+|||.|+.++++.+.+++ .+|.+++++-|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 357999999999999999999998 789999999998643
No 89
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.16 E-value=4.1e-10 Score=86.57 Aligned_cols=100 Identities=24% Similarity=0.338 Sum_probs=88.8
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChhH
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLGA 102 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg 102 (216)
|+|+++|+.+|....|.++...|... ..|+..+.||.+... ....+++++++...+.|.+. +..+++|+|+|+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 68999999999999999999999998 999999999998633 24678999999999888888 66799999999999
Q ss_pred HHHHHHHHh---CccccceEEEEccccc
Q 027952 103 AVAVDFAVN---HPEAVENLVFIDASVY 127 (216)
Q Consensus 103 ~~a~~~a~~---~~~~~~~lvli~~~~~ 127 (216)
.+|...|.+ ..+.|..++++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999996 3456999999999875
No 90
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.15 E-value=3.2e-10 Score=106.30 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=88.7
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc-CCCeEEEeeC
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI-KRPMILVGPS 99 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 99 (216)
+++++++++||++++...|..+.+.|.+. +.|+.++.+|++... ...++++++++++.+.++... ..+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 45688999999999999999999999876 999999999998653 245899999999999998874 4589999999
Q ss_pred hhHHHHHHHHHh---CccccceEEEEcccc
Q 027952 100 LGAAVAVDFAVN---HPEAVENLVFIDASV 126 (216)
Q Consensus 100 ~Gg~~a~~~a~~---~~~~~~~lvli~~~~ 126 (216)
|||.+|..+|.+ +++++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999996 577899999998744
No 91
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.14 E-value=1.4e-09 Score=86.88 Aligned_cols=120 Identities=18% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCcceEEEeeeccC-CCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCC-CC---------CCCCC
Q 027952 5 FSESCIMSSVVKPL-KPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL-ER---------LPPCN 73 (216)
Q Consensus 5 ~~~~~i~~~~~~~~-~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~-~~---------~~~~~ 73 (216)
.++.+|...+..|. ..++-|.||..||.++....|.... .++..||.++.+|.||+|.... .. .....
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g 142 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRG 142 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTT
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcC
Confidence 46778888889997 5566689999999999987776544 4678899999999999993221 10 00011
Q ss_pred hhh---------HHHHHHHHHHHh------cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 74 VTS---------KREHFYQLWKTY------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 74 ~~~---------~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+++ ...++...++-+ +.+++.+.|.|+||.+++.+|+..+ +|+++++.-|..
T Consensus 143 ~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 143 IDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp TTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 221 223333333333 3468999999999999999999886 499999988754
No 92
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.13 E-value=5.4e-10 Score=81.98 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=83.4
Q ss_pred CCCCcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---cCCCeEE
Q 027952 21 SKTSPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---IKRPMIL 95 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 95 (216)
+....+|++||+.++... ...++..|.+.|+-++.+|.+|.|+|+..- ..-....-++|+..+++++ +..-.++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf-~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSF-YYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcc-ccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 355789999999988764 456889999999999999999999998763 3334455569999999988 3334689
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+|||-||.+++.+|.++++ ++-+|-++...
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEccccc
Confidence 9999999999999999987 66676666544
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.11 E-value=1.2e-09 Score=78.81 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=75.8
Q ss_pred CCCCCcEEEEcC-----CCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHhcCCC-
Q 027952 20 PSKTSPVVLLHG-----FDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTYIKRP- 92 (216)
Q Consensus 20 ~~~~~~lv~~hG-----~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 92 (216)
..+.|..|++|. ...+......++..|.+.||.++.+|+||.|.|...- ...-..+|....+..+-.+....+
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 456677788875 2344455678999999999999999999999998753 122234444444444333334444
Q ss_pred eEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 93 MILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
..+.|+|+|+.+++.+|.+.|+ ....+.+.|+..
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 4799999999999999999987 566666676654
No 94
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.11 E-value=1.4e-10 Score=85.17 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=81.3
Q ss_pred CCCCCCcEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---cCCCeE
Q 027952 19 KPSKTSPVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---IKRPMI 94 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 94 (216)
.+..+|+++++|+..|+-....+.++-+..+ +..|+.+++||+|.|+... ....+..-++.+.+.+... ...+++
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp-sE~GL~lDs~avldyl~t~~~~dktkiv 152 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP-SEEGLKLDSEAVLDYLMTRPDLDKTKIV 152 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc-cccceeccHHHHHHHHhcCccCCcceEE
Confidence 4557899999999999888766666655443 6899999999999998764 2223333333333333222 556899
Q ss_pred EEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 95 LVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 95 l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+.|.|+||.+|+.+|+++.++++++|+.....
T Consensus 153 lfGrSlGGAvai~lask~~~ri~~~ivENTF~ 184 (300)
T KOG4391|consen 153 LFGRSLGGAVAIHLASKNSDRISAIIVENTFL 184 (300)
T ss_pred EEecccCCeeEEEeeccchhheeeeeeechhc
Confidence 99999999999999999999999999988754
No 95
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=9.1e-10 Score=86.41 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=84.8
Q ss_pred CcceEEEeeecc--CCCCCCCcEEEEcCCCCCcc-hHHh---------hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCC
Q 027952 6 SESCIMSSVVKP--LKPSKTSPVVLLHGFDSSCL-EWRC---------TYPLLEEAGLETWAVDILGWGFSDLERLPPCN 73 (216)
Q Consensus 6 ~~~~i~~~~~~~--~~~~~~~~lv~~hG~~~~~~-~~~~---------~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~ 73 (216)
+|.+|....+.| ..+++-|+||..|+++.... .... ....|.++||.|+..|.||+|.|+... ...
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~-~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEF-DPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B--TT-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcc-ccC-
Confidence 467899999999 66667799999999996542 1111 112399999999999999999998753 111
Q ss_pred hhhHHHHHHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 74 VTSKREHFYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
...-++|..+.++.+ ...++.++|.|.+|..++..|+..|..+++++...+..
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 445556666666665 23479999999999999999998888899999988755
No 96
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.09 E-value=1.5e-09 Score=82.30 Aligned_cols=112 Identities=17% Similarity=0.090 Sum_probs=77.1
Q ss_pred EeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCC--------ChhhHHHHH
Q 027952 12 SSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPC--------NVTSKREHF 81 (216)
Q Consensus 12 ~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~--------~~~~~~~~~ 81 (216)
.....|.+.++.|.||++|++.|-....+.+++.|++.||.|+++|+-+-....... .... ..+...+++
T Consensus 3 ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (218)
T PF01738_consen 3 AYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADL 82 (218)
T ss_dssp EEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHH
T ss_pred EEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHH
Confidence 345566655678999999999988887888999999999999999986543311111 0000 123445566
Q ss_pred HHHHHHh---c---CCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 82 YQLWKTY---I---KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 82 ~~~~~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
...++.+ . .+++.++|+|+||.+++.+|.+. +.+++.|...|
T Consensus 83 ~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 5556665 2 35899999999999999999888 56999999888
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.07 E-value=3.8e-10 Score=93.36 Aligned_cols=93 Identities=14% Similarity=0.233 Sum_probs=69.7
Q ss_pred CCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCC-CCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 34 SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERL-PPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 34 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
.....|..+.+.|.+.||.+ ..|++|+|.+.+... .....++..+.++++.++.+.++++|+||||||.++..++.++
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 34567899999999998766 889999999877521 0112334444444444444678999999999999999999988
Q ss_pred ccc----cceEEEEccccc
Q 027952 113 PEA----VENLVFIDASVY 127 (216)
Q Consensus 113 ~~~----~~~lvli~~~~~ 127 (216)
|+. |+++|.++++..
T Consensus 184 p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CHhHHhHhccEEEECCCCC
Confidence 763 789999988764
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.06 E-value=1.4e-09 Score=85.89 Aligned_cols=124 Identities=26% Similarity=0.334 Sum_probs=103.1
Q ss_pred CCCCcceEEEeeeccCCC---CCCCcEEEEcCCCCCcchHHhhhhHHHhC---C------CeEEEEcCCCCCCCCCCCCC
Q 027952 3 VNFSESCIMSSVVKPLKP---SKTSPVVLLHGFDSSCLEWRCTYPLLEEA---G------LETWAVDILGWGFSDLERLP 70 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~---~~~~~lv~~hG~~~~~~~~~~~~~~l~~~---g------~~v~~~d~~g~G~s~~~~~~ 70 (216)
|+-+|-.|......|... .+--|++++||+.|+-.++-.+..-|.+. | |.|+++.+||+|-|+.++-.
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 455677788888877532 23368999999999998877777766544 2 78999999999999988766
Q ss_pred CCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 71 PCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..+..+.|..+..++-+++..++.|-|-.+|..|+..+|..+|++|.++=+.-+..
T Consensus 209 GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 209 GFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred CccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 78888999999999999999999999999999999999999999998876655544
No 99
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.04 E-value=1.4e-09 Score=82.29 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=82.6
Q ss_pred eeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----
Q 027952 13 SVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---- 88 (216)
Q Consensus 13 ~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---- 88 (216)
....|...+.=|.|+|+||+......|..+.++++.+||-|+++++-..-..+.. .+..+....++++.+-+.++
T Consensus 36 lI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~-~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 36 LIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQ-DEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred EEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCch-HHHHHHHHHHHHHHhhhhhhCCCC
Confidence 3344555566699999999999999999999999999999999998653211111 11123334444444444444
Q ss_pred ---cCCCeEEEeeChhHHHHHHHHHhCc--cccceEEEEccccc
Q 027952 89 ---IKRPMILVGPSLGAAVAVDFAVNHP--EAVENLVFIDASVY 127 (216)
Q Consensus 89 ---~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~~lvli~~~~~ 127 (216)
+..++.++|||.||..|+.+|..+. -.+++||-++|...
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 4468999999999999999999774 23789999999654
No 100
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.02 E-value=1.2e-09 Score=82.80 Aligned_cols=122 Identities=19% Similarity=0.209 Sum_probs=89.4
Q ss_pred CCCCcceEEEeeeccCCC-CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-----C-------
Q 027952 3 VNFSESCIMSSVVKPLKP-SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-----L------- 69 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~-~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----~------- 69 (216)
+++.+.+|..-+..|... +..|.||-.||+++....|..++.. +..||.|+..|.||.|.|+..+ .
T Consensus 62 ~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~w-a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 62 TGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHW-AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred eccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccc-cccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 467889999999999766 6779999999999999998766554 3467999999999999884421 0
Q ss_pred --------CCCChhhHHHHHHHHHHHh------cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 70 --------PPCNVTSKREHFYQLWKTY------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 70 --------~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..|-......|+...++.+ ..+++.+.|.|.||.+++.+++..| ++++++.+-|..
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 0000111222333333332 5668999999999999999999886 489999877754
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.01 E-value=1.5e-09 Score=88.48 Aligned_cols=127 Identities=18% Similarity=0.272 Sum_probs=97.5
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHH------hhhhHHHhCCCeEEEEcCCCCCCCCCCC--------
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWR------CTYPLLEEAGLETWAVDILGWGFSDLER-------- 68 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~g~G~s~~~~-------- 68 (216)
|.++++-|....-.|..++++|+|++.||+.+++..|- .+.-.|+++||+|..-+.||--.|.+..
T Consensus 53 V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~ 132 (403)
T KOG2624|consen 53 VTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDK 132 (403)
T ss_pred EEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCc
Confidence 44566667777777766688999999999999999883 3556889999999999999976665432
Q ss_pred -CCCCChhhHHH-HHHHHHHHh----cCCCeEEEeeChhHHHHHHHHHhCcc---ccceEEEEccccccC
Q 027952 69 -LPPCNVTSKRE-HFYQLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPE---AVENLVFIDASVYAE 129 (216)
Q Consensus 69 -~~~~~~~~~~~-~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~---~~~~lvli~~~~~~~ 129 (216)
.=..++++++. |+-++++.. +.++++.+|||.|+...+..+..+|+ +|+..++++|.+...
T Consensus 133 ~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 133 EFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred ceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 11235555443 555555554 67899999999999999998887764 799999999988544
No 102
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.00 E-value=2.3e-09 Score=78.07 Aligned_cols=89 Identities=20% Similarity=0.267 Sum_probs=63.2
Q ss_pred EEEEcCCCCCcc-hHHh-hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHH
Q 027952 26 VVLLHGFDSSCL-EWRC-TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAA 103 (216)
Q Consensus 26 lv~~hG~~~~~~-~~~~-~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 103 (216)
|+++||++++.. .|.+ +.+.+.+. ++|-.+++ ...+.+++.+.+.+.+... .++++|||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI-DEPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC--TTTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc-CCCeEEEEeCHHHH
Confidence 689999998764 5776 44566665 67776665 1236788888888877765 45699999999999
Q ss_pred HHHHHH-HhCccccceEEEEccccc
Q 027952 104 VAVDFA-VNHPEAVENLVFIDASVY 127 (216)
Q Consensus 104 ~a~~~a-~~~~~~~~~lvli~~~~~ 127 (216)
.+++++ .+...+|.+++|++|+-.
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHhhcccccccEEEEEcCCCc
Confidence 999999 777889999999999753
No 103
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.99 E-value=1.8e-09 Score=81.84 Aligned_cols=109 Identities=20% Similarity=0.190 Sum_probs=65.8
Q ss_pred CCCCCCcEEEEcCCCCCcchHHhhhh-HHHhCCCeEEEEcCCC------CCC---CCCCC----C----CCCChhhHHHH
Q 027952 19 KPSKTSPVVLLHGFDSSCLEWRCTYP-LLEEAGLETWAVDILG------WGF---SDLER----L----PPCNVTSKREH 80 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~G~---s~~~~----~----~~~~~~~~~~~ 80 (216)
.+...+.||++||+|.+.+.|..+.. .+......++.+.-|- .|. +.-+. . ....+++.++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 45667899999999999977765555 2222336666665442 232 22110 0 11223444556
Q ss_pred HHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 81 FYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 81 ~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+.++++.. ..++++|+|+|.||.+|+.++.++|+.+.++|.+++...
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 66666654 456899999999999999999999999999999998654
No 104
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.99 E-value=2.6e-09 Score=80.28 Aligned_cols=105 Identities=19% Similarity=0.174 Sum_probs=85.4
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHH-HhcCCCeEEEee
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWK-TYIKRPMILVGP 98 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~ 98 (216)
.+.+..++++|--||++..++.+...|... ..++.+.+||+|.--.. ....+++++++.+..-+. -+..+++.+.||
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~e-p~~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGE-PLLTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCC-cccccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 456788999999999999999999999886 99999999999865333 356799999999998888 466778999999
Q ss_pred ChhHHHHHHHHHhCcc---ccceEEEEcccc
Q 027952 99 SLGAAVAVDFAVNHPE---AVENLVFIDASV 126 (216)
Q Consensus 99 S~Gg~~a~~~a~~~~~---~~~~lvli~~~~ 126 (216)
||||++|..+|.+... ...++.+.+...
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~a 112 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRA 112 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCC
Confidence 9999999999987432 255666666544
No 105
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.99 E-value=1.1e-08 Score=79.87 Aligned_cols=106 Identities=14% Similarity=0.165 Sum_probs=66.9
Q ss_pred CCCcEEEEcCCCCCc---chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh--------cC
Q 027952 22 KTSPVVLLHGFDSSC---LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY--------IK 90 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 90 (216)
.+..||||.|++... .....+++.|.+.||.++-+-++..... ....+++.-++++.++++.+ ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G----~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSG----WGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTT----S-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCC----cCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 567899999998544 3457789999888899999887652111 22345666677776666655 25
Q ss_pred CCeEEEeeChhHHHHHHHHHhCc-----cccceEEEEccccccCCC
Q 027952 91 RPMILVGPSLGAAVAVDFAVNHP-----EAVENLVFIDASVYAEGT 131 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~~lvli~~~~~~~~~ 131 (216)
++++|+|||.|+.-+++|+.+.. ..|++.||-+|.-..+..
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 68999999999999999998652 569999999997754443
No 106
>PRK10115 protease 2; Provisional
Probab=98.98 E-value=7.8e-09 Score=90.70 Aligned_cols=124 Identities=15% Similarity=0.015 Sum_probs=93.3
Q ss_pred CCcceEEEeeec-cC--CCCCCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCCCC---C----CCCCC
Q 027952 5 FSESCIMSSVVK-PL--KPSKTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFSDL---E----RLPPC 72 (216)
Q Consensus 5 ~~~~~i~~~~~~-~~--~~~~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s~~---~----~~~~~ 72 (216)
.+|.+|...+.. |. .+++.|.||++||..+... .|......|.++||.|+.++.||-|+-.. . .....
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 467777765554 42 2355699999999776553 46667778999999999999999653321 1 12235
Q ss_pred ChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 73 NVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 73 ~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
+++|+...++.++++- ..+++.+.|-|.||.++...+.++|++++++|...|....
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 6777777777776664 5678999999999999999999999999999999887643
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.98 E-value=8.3e-09 Score=76.05 Aligned_cols=88 Identities=24% Similarity=0.284 Sum_probs=67.6
Q ss_pred cEEEEcCCCCCcchHH--hhhhHHHhCCC--eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 25 PVVLLHGFDSSCLEWR--CTYPLLEEAGL--ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~--~~~~~l~~~g~--~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
.|+++||+.++..... .+.+.+.+.+. .+..++++ .+.+...+.+.+++++...+.+.|+|.||
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 3799999999887654 45667777643 34455443 45677788888999888767799999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
||..|.++|.+++ +.+ |||+|+..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999986 444 88898774
No 108
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.97 E-value=5.7e-09 Score=80.46 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHH-hCCCe----EEEEcCCCC----CCCC---CCC------CCC--CChhhHHHH
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLE-EAGLE----TWAVDILGW----GFSD---LER------LPP--CNVTSKREH 80 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~-~~g~~----v~~~d~~g~----G~s~---~~~------~~~--~~~~~~~~~ 80 (216)
....|.||+||++++...+..+++.+. +.|.. ++.++.-|. |.=. ..+ ... .+....+++
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 346789999999999999999999997 66533 344444442 2211 111 112 357788889
Q ss_pred HHHHHHHh----cCCCeEEEeeChhHHHHHHHHHhCcc-----ccceEEEEcccccc
Q 027952 81 FYQLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPE-----AVENLVFIDASVYA 128 (216)
Q Consensus 81 ~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~~~~lvli~~~~~~ 128 (216)
+..++..+ +..++.+|||||||+.++.|+.++.. .+.++|.|+++...
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 98888887 66789999999999999999998532 48999999998743
No 109
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.95 E-value=9.8e-09 Score=82.22 Aligned_cols=120 Identities=16% Similarity=0.081 Sum_probs=70.9
Q ss_pred CcceEEEeeeccCC-CCCCCcEEEEcCCCCCcch--------------H----HhhhhHHHhCCCeEEEEcCCCCCCCCC
Q 027952 6 SESCIMSSVVKPLK-PSKTSPVVLLHGFDSSCLE--------------W----RCTYPLLEEAGLETWAVDILGWGFSDL 66 (216)
Q Consensus 6 ~~~~i~~~~~~~~~-~~~~~~lv~~hG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~g~G~s~~ 66 (216)
.+.++......|++ .+.-|+||++||-++..+. + ..+..+|+++||.|+++|.+|+|+...
T Consensus 97 p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~ 176 (390)
T PF12715_consen 97 PGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGD 176 (390)
T ss_dssp TTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-S
T ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccc
Confidence 44556677778876 5666999999987654321 1 135779999999999999999998654
Q ss_pred CC----CCCCChhhHHHHH---------------HHHHHHh------cCCCeEEEeeChhHHHHHHHHHhCccccceEEE
Q 027952 67 ER----LPPCNVTSKREHF---------------YQLWKTY------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVF 121 (216)
Q Consensus 67 ~~----~~~~~~~~~~~~~---------------~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvl 121 (216)
.. ...++....+..+ ...++-+ ..++|.++|+||||..++.+|+..+ +|++.|.
T Consensus 177 ~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~ 255 (390)
T PF12715_consen 177 MEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVA 255 (390)
T ss_dssp SCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEE
T ss_pred ccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhh
Confidence 32 1122333333211 1222333 4458999999999999999999884 5888888
Q ss_pred Ecccc
Q 027952 122 IDASV 126 (216)
Q Consensus 122 i~~~~ 126 (216)
++...
T Consensus 256 ~~~l~ 260 (390)
T PF12715_consen 256 NGYLC 260 (390)
T ss_dssp ES-B-
T ss_pred hhhhh
Confidence 77644
No 110
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.94 E-value=1.8e-09 Score=81.25 Aligned_cols=86 Identities=21% Similarity=0.273 Sum_probs=50.1
Q ss_pred CcEEEEcCCCC-CcchHHhhhhHHHhCCCe---EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeEE
Q 027952 24 SPVVLLHGFDS-SCLEWRCTYPLLEEAGLE---TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMIL 95 (216)
Q Consensus 24 ~~lv~~hG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 95 (216)
.||||+||.++ ....|..+.+.|.++||. ++++++-......... ......+.+..+.++++.. +. ++.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~-~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ-NAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH-HHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc-ccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 58999999999 556799999999999999 8999984332211110 0011122334555555444 66 9999
Q ss_pred EeeChhHHHHHHHHHh
Q 027952 96 VGPSLGAAVAVDFAVN 111 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~ 111 (216)
||||||+.++-++...
T Consensus 80 VgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEETCHHHHHHHHHHH
T ss_pred EEcCCcCHHHHHHHHH
Confidence 9999999988777653
No 111
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.93 E-value=1.1e-08 Score=89.11 Aligned_cols=119 Identities=17% Similarity=0.116 Sum_probs=85.8
Q ss_pred CcceEEEeeeccCCCCC---CCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCC-----CCC--CCCCCC
Q 027952 6 SESCIMSSVVKPLKPSK---TSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFS-----DLE--RLPPCN 73 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~---~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s-----~~~--~~~~~~ 73 (216)
+|.+|..-...|.+.+. -|+||++||...... .+....+.|+..||.|+.++.||.+.- +.. ......
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 45578888888855443 289999999874443 466788999999999999999986432 111 123345
Q ss_pred hhhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 74 VTSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
.++..+.+. ++.+. ..+++.|.|+|.||.+++..+.+.| .+++.|...+..
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 666666666 44444 3458999999999999999999998 577777766644
No 112
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.92 E-value=3.6e-09 Score=79.93 Aligned_cols=89 Identities=19% Similarity=0.170 Sum_probs=61.9
Q ss_pred HHhhhhHHHhCCCeEEEEcCCCCCCCCCC-------CCCCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHH
Q 027952 39 WRCTYPLLEEAGLETWAVDILGWGFSDLE-------RLPPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFA 109 (216)
Q Consensus 39 ~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a 109 (216)
|....+.|+++||.|+.+|.||.+..... ......++|..+.+..++++. +.+++.++|+|+||.++..++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34567789999999999999998742211 111223444444444444443 457899999999999999999
Q ss_pred HhCccccceEEEEccccc
Q 027952 110 VNHPEAVENLVFIDASVY 127 (216)
Q Consensus 110 ~~~~~~~~~lvli~~~~~ 127 (216)
.++|++++++|..++...
T Consensus 83 ~~~~~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSD 100 (213)
T ss_dssp HHTCCGSSEEEEESE-SS
T ss_pred cccceeeeeeeccceecc
Confidence 999999999999998664
No 113
>COG0400 Predicted esterase [General function prediction only]
Probab=98.91 E-value=7.6e-09 Score=77.27 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=73.2
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC--CCCCCC---CCCCCC-------hhhHHHHHHHHHHH
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW--GFSDLE---RLPPCN-------VTSKREHFYQLWKT 87 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--G~s~~~---~~~~~~-------~~~~~~~~~~~~~~ 87 (216)
....|+||++||+|++...+-++.+.+..+ +.++.+.-+-- |.-... +...++ .+.+++.+....++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 345578999999999988887766666555 66665432211 000000 011222 23344444444455
Q ss_pred h--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCC
Q 027952 88 Y--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130 (216)
Q Consensus 88 ~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~ 130 (216)
. ..++++++|+|.||++++....++|+.++++|+.++....+.
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 5 347899999999999999999999999999999999765443
No 114
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.91 E-value=2.6e-08 Score=75.19 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=74.5
Q ss_pred EeeeccCCC--CCCCcEEEEcCCCCCcchHHh--hhhHHHhC-CCeEEEEcCCCC---CCCCC---C-C-CCCCChhhHH
Q 027952 12 SSVVKPLKP--SKTSPVVLLHGFDSSCLEWRC--TYPLLEEA-GLETWAVDILGW---GFSDL---E-R-LPPCNVTSKR 78 (216)
Q Consensus 12 ~~~~~~~~~--~~~~~lv~~hG~~~~~~~~~~--~~~~l~~~-g~~v~~~d~~g~---G~s~~---~-~-~~~~~~~~~~ 78 (216)
|..+.|... ++.|.||++||.+++.+.+.. -+..+++. ||-|+.|+.... +.+.. . . ...-+....+
T Consensus 3 Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~ 82 (220)
T PF10503_consen 3 YRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIA 82 (220)
T ss_pred EEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHH
Confidence 556666533 245889999999999876643 22345544 788888875421 11110 0 0 0011222233
Q ss_pred HHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 79 EHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 79 ~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
..+..+.++. +..++++.|+|.||+.+..++..+|+.+.++.+++....
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 3333344444 566899999999999999999999999999988887654
No 115
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.90 E-value=9.8e-09 Score=76.29 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=78.8
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHH-HHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKRE-HFY 82 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~-~~~ 82 (216)
.++.....+..|......-.+++..+.+.....+++++..+++.||.|..+|+||.|.|+... ...+.+.|++. |+.
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 344444444444333333467777778888889999999999999999999999999998753 23355656554 444
Q ss_pred HHHHHh----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 83 QLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 83 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
..++++ ...+...+|||+||.+...+. +++ +..+....+.
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~ 136 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGS 136 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEecc
Confidence 444443 567899999999999665554 454 3444444444
No 116
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.89 E-value=2.7e-08 Score=83.62 Aligned_cols=122 Identities=13% Similarity=0.080 Sum_probs=89.0
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEc--CCCCCc---chHHhhhh---HHHhCCCeEEEEcCCCCCCCCCCCCCCC--Chh
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLH--GFDSSC---LEWRCTYP---LLEEAGLETWAVDILGWGFSDLERLPPC--NVT 75 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~h--G~~~~~---~~~~~~~~---~l~~~g~~v~~~d~~g~G~s~~~~~~~~--~~~ 75 (216)
+|-+++...+.|.+.++.|+++..+ .+.... ..-..... .++.+||.|+..|.||.|.|+......+ ..+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~ 107 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAE 107 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecccccc
Confidence 6778999999998888889999999 544332 11122333 6888999999999999999998642222 233
Q ss_pred hHHHHHHHHHHHh-cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 76 SKREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 76 ~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|-.+.|+-+.++- ...++..+|.|.+|.....+|+.+|..++.++...+...
T Consensus 108 Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 108 DGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred chhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 3343333333332 456799999999999999999988887888888887653
No 117
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.87 E-value=1.9e-08 Score=78.96 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=75.6
Q ss_pred CcceEEEeee--ccCCCCCCCcEEEE-cCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 6 SESCIMSSVV--KPLKPSKTSPVVLL-HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 6 ~~~~i~~~~~--~~~~~~~~~~lv~~-hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
++++|.+.+. +|...+++..+|++ -|..|--+ .. +...=.+.||.|+.+++|||++|..... ..+-...++.+.
T Consensus 223 dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-vG-~m~tP~~lgYsvLGwNhPGFagSTG~P~-p~n~~nA~DaVv 299 (517)
T KOG1553|consen 223 DGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-VG-VMNTPAQLGYSVLGWNHPGFAGSTGLPY-PVNTLNAADAVV 299 (517)
T ss_pred CCcchhheeecCCCCCCCCCceEEEEecCCccceE-ee-eecChHHhCceeeccCCCCccccCCCCC-cccchHHHHHHH
Confidence 4555555554 44455666665555 44333222 22 3333344579999999999999987642 333333444444
Q ss_pred HHHHH-h--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 83 QLWKT-Y--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 83 ~~~~~-~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
++.-+ + ..+.++|.|+|.||.-++++|..||+ |+++||=+.
T Consensus 300 QfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 300 QFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred HHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecc
Confidence 44433 3 56789999999999999999999998 899998554
No 118
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.84 E-value=1e-08 Score=77.21 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=63.8
Q ss_pred EEEEcCCC---CCcchHHhhhhHHHh-CCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---------cCCC
Q 027952 26 VVLLHGFD---SSCLEWRCTYPLLEE-AGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---------IKRP 92 (216)
Q Consensus 26 lv~~hG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 92 (216)
||++||.+ ++......++..+++ .|+.|+.+|+|=.. ...+.+..+++.+.++.+ +.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc--------cccccccccccccceeeeccccccccccccc
Confidence 78999987 444445567777775 79999999998432 233444555555444443 4568
Q ss_pred eEEEeeChhHHHHHHHHHhCcc----ccceEEEEccccc
Q 027952 93 MILVGPSLGAAVAVDFAVNHPE----AVENLVFIDASVY 127 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~~~----~~~~lvli~~~~~ 127 (216)
++|+|+|.||.+|+.++.+..+ .++++++++|...
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 9999999999999999986433 3899999999653
No 119
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.81 E-value=5.8e-08 Score=74.33 Aligned_cols=108 Identities=11% Similarity=0.111 Sum_probs=72.2
Q ss_pred CCCCCcEEEEcCCCCCcchH-HhhhhHHHhCCC--eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCC
Q 027952 20 PSKTSPVVLLHGFDSSCLEW-RCTYPLLEEAGL--ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRP 92 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~-~~~~~~l~~~g~--~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 92 (216)
.+++..+||+||++.+.+.- ...++-....++ .++.+++|+.|....-.....+...-...+.++++.+ ...+
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 35678999999999887653 334433333334 6999999988753211011123444455666666665 4678
Q ss_pred eEEEeeChhHHHHHHHHHh----Cc-----cccceEEEEccccc
Q 027952 93 MILVGPSLGAAVAVDFAVN----HP-----EAVENLVFIDASVY 127 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~----~~-----~~~~~lvli~~~~~ 127 (216)
++|++||||+.+.+..... .+ .++..+|+.+|...
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999998887654 21 35789999998663
No 120
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.81 E-value=8.5e-08 Score=78.46 Aligned_cols=103 Identities=9% Similarity=0.104 Sum_probs=84.1
Q ss_pred CcEEEEcCCCCCcchH-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhH
Q 027952 24 SPVVLLHGFDSSCLEW-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGA 102 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 102 (216)
|+||++..+.++.... +.+++.|-+ |++||..|+.--+..+.. ....+++++++.+.+++++.+.+ ++++|+|+||
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG 179 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPA 179 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhh
Confidence 7999999988776654 568999998 899999999766644322 25678999999999999998666 9999999999
Q ss_pred HHHHHHHHhC-----ccccceEEEEccccccC
Q 027952 103 AVAVDFAVNH-----PEAVENLVFIDASVYAE 129 (216)
Q Consensus 103 ~~a~~~a~~~-----~~~~~~lvli~~~~~~~ 129 (216)
.+++.+++.. |++++++++++++....
T Consensus 180 ~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 180 VPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 9977776654 66799999999987544
No 121
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.79 E-value=4.5e-09 Score=84.26 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=65.3
Q ss_pred CCCCcEEEEcCCCCCc--chHH-hhhhHHHh---CCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh------
Q 027952 21 SKTSPVVLLHGFDSSC--LEWR-CTYPLLEE---AGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY------ 88 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~--~~~~-~~~~~l~~---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~------ 88 (216)
..+|++|++||+.++. ..|. .+.+.+.+ .++.|+++|+.......-. ..........+.+.+++..+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~-~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP-QAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH-HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc-chhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 3679999999999887 3564 45565544 3699999999643111000 00112333444444544443
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCcc--ccceEEEEccccc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHPE--AVENLVFIDASVY 127 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~lvli~~~~~ 127 (216)
..++++|+|||+||.+|-.++.+... ++.+++.++|+..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 56789999999999999999998776 8999999999764
No 122
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.78 E-value=1.4e-07 Score=72.76 Aligned_cols=123 Identities=19% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCCcceEEEeeeccCCC-CCCCcEEEEcCCCCCcchHHhhh--hHHHhC-CCeEEEEcCC-------CCCCCCCCC---C
Q 027952 4 NFSESCIMSSVVKPLKP-SKTSPVVLLHGFDSSCLEWRCTY--PLLEEA-GLETWAVDIL-------GWGFSDLER---L 69 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~-~~~~~lv~~hG~~~~~~~~~~~~--~~l~~~-g~~v~~~d~~-------g~G~s~~~~---~ 69 (216)
.+.+...-+.++.|... ...|.||++||.+++....+... +.|++. ||-|..+|-- +++.+..+. .
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~ 120 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRR 120 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccC
Confidence 44555666667776543 34578899999999887665543 455544 7889988422 223231111 1
Q ss_pred CCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 70 PPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..-+...+.+.+..++.+. ...++++.|.|-||.++.+++..+|+.+.++.+|++..
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1122333444444444444 44589999999999999999999999999999998865
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.78 E-value=1.1e-07 Score=76.04 Aligned_cols=117 Identities=18% Similarity=0.136 Sum_probs=80.1
Q ss_pred eEEEeeecc--CCCCCCCcEEEEcCCC---CCcchH-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHH
Q 027952 9 CIMSSVVKP--LKPSKTSPVVLLHGFD---SSCLEW-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 9 ~i~~~~~~~--~~~~~~~~lv~~hG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
.+....+.| ......|+||++||.+ ++.... ..+...+...|+.|+.+|+|=..+-. ....+++....+.
T Consensus 63 ~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~----~p~~~~d~~~a~~ 138 (312)
T COG0657 63 GVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP----FPAALEDAYAAYR 138 (312)
T ss_pred ceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC----CCchHHHHHHHHH
Confidence 366777777 3344579999999987 555555 44555666679999999998653332 2234444333333
Q ss_pred HHHHH---h--cCCCeEEEeeChhHHHHHHHHHhCcc----ccceEEEEccccccC
Q 027952 83 QLWKT---Y--IKRPMILVGPSLGAAVAVDFAVNHPE----AVENLVFIDASVYAE 129 (216)
Q Consensus 83 ~~~~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~~~----~~~~lvli~~~~~~~ 129 (216)
.+.++ + ..+++.++|+|.||.+++.++..-.+ ...+.++++|.....
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 33333 2 36789999999999999999986543 468999999976443
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.71 E-value=1.8e-07 Score=69.81 Aligned_cols=95 Identities=20% Similarity=0.175 Sum_probs=73.3
Q ss_pred EEcCCC--CCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChhHHH
Q 027952 28 LLHGFD--SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLGAAV 104 (216)
Q Consensus 28 ~~hG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~ 104 (216)
++|..+ ++...|.++...|.+. +.++.++.+|++.+... ..+.++.++...+.+... ...+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 5667899999999876 99999999999866543 346777777666655554 4678999999999999
Q ss_pred HHHHHHh---CccccceEEEEcccc
Q 027952 105 AVDFAVN---HPEAVENLVFIDASV 126 (216)
Q Consensus 105 a~~~a~~---~~~~~~~lvli~~~~ 126 (216)
+...+.+ .++.+.+++++++..
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCC
Confidence 9998886 446689999998755
No 125
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.71 E-value=4.6e-07 Score=63.79 Aligned_cols=108 Identities=18% Similarity=0.125 Sum_probs=81.1
Q ss_pred CCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCC-----CCCCCCCCCChhhHHHHHHHHHHHhcCCCeEE
Q 027952 23 TSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGF-----SDLERLPPCNVTSKREHFYQLWKTYIKRPMIL 95 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~-----s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (216)
.-+||+.||-+.+-+ ....++..|+..|+.|..++++-.-. -.++.....--.++...+.++-+.+...+.++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 456888899986655 57889999999999999999875321 11111222334567777778877777789999
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEccccccCC
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~ 130 (216)
.|+||||.++...+..-...|+++++.+-+.-..+
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG 128 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG 128 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCCCC
Confidence 99999999999998876555999999998765444
No 126
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.66 E-value=5.3e-07 Score=67.81 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=69.7
Q ss_pred ceEEEeeeccCCC--CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC-CCCCCCCCCCCChhhHHHHHHHH
Q 027952 8 SCIMSSVVKPLKP--SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW-GFSDLERLPPCNVTSKREHFYQL 84 (216)
Q Consensus 8 ~~i~~~~~~~~~~--~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~ 84 (216)
..|..-...|.+. ...++||+.+|++..-+.+..+++.|+.+||+|+.+|..-| |.|+.. ...++++...+++..+
T Consensus 13 ~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~-I~eftms~g~~sL~~V 91 (294)
T PF02273_consen 13 RQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD-INEFTMSIGKASLLTV 91 (294)
T ss_dssp EEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHH
T ss_pred CEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC-hhhcchHHhHHHHHHH
Confidence 3344444445332 34589999999999999999999999999999999999987 778765 4667888888888877
Q ss_pred HHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 85 WKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 85 ~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
++.+ +..++.|+..|+.|.+|...|.+- + ++.+|+.-+..
T Consensus 92 ~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i-~-lsfLitaVGVV 134 (294)
T PF02273_consen 92 IDWLATRGIRRIGLIAASLSARIAYEVAADI-N-LSFLITAVGVV 134 (294)
T ss_dssp HHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred HHHHHhcCCCcchhhhhhhhHHHHHHHhhcc-C-cceEEEEeeee
Confidence 7776 667899999999999999999955 3 77787766544
No 127
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.65 E-value=1.2e-07 Score=76.51 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=81.3
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCe---EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLE---TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
..-+++++||++.+...|..+...+...|+. ++.++.++. .... ......+.....+.+.+...+.+++.++||
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~--~~~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTY--SLAVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCc--cccccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 3559999999988888898888888877777 888888865 1111 233455666666666666667789999999
Q ss_pred ChhHHHHHHHHHhCc--cccceEEEEccccc
Q 027952 99 SLGAAVAVDFAVNHP--EAVENLVFIDASVY 127 (216)
Q Consensus 99 S~Gg~~a~~~a~~~~--~~~~~lvli~~~~~ 127 (216)
||||.++-+++...+ ..|+.++.++++-.
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999888 78999999998764
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.63 E-value=1.1e-07 Score=77.79 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCC--CC--CC-----C--------------CCC-----
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS--DL--ER-----L--------------PPC----- 72 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s--~~--~~-----~--------------~~~----- 72 (216)
++-|+|||-||++++...+..++..|+.+||-|+++|+|..-.+ .. .. . ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34589999999999999999999999999999999999953111 00 00 0 000
Q ss_pred ------ChhhHHHHHHHHHHHh--------------------------cCCCeEEEeeChhHHHHHHHHHhCccccceEE
Q 027952 73 ------NVTSKREHFYQLWKTY--------------------------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLV 120 (216)
Q Consensus 73 ------~~~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lv 120 (216)
.++.-+.++..+++.+ +.+++.++|||+||..++..+.+. .+++..|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 0011122233333222 123699999999999999988877 5699999
Q ss_pred EEccccc
Q 027952 121 FIDASVY 127 (216)
Q Consensus 121 li~~~~~ 127 (216)
+.++...
T Consensus 257 ~LD~W~~ 263 (379)
T PF03403_consen 257 LLDPWMF 263 (379)
T ss_dssp EES---T
T ss_pred EeCCccc
Confidence 9999764
No 129
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=6.5e-07 Score=64.05 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=67.1
Q ss_pred CCcEEEEcCCCCCcc-hHHhhhh-HHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 23 TSPVVLLHGFDSSCL-EWRCTYP-LLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~-~~~~~~~-~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
.+.+|++||++++.. .|....+ .|. .+-.++.. .......++++..+.+.+... .++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQD--------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhCc----cchhcccC--------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 357899999997774 4654333 222 22223322 124457888888888888776 55699999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|+..+.+++.+....|.++.|++|+-.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCc
Confidence 999999999987778999999999763
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.59 E-value=3.8e-07 Score=66.51 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=77.8
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeEEEeeCh
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMILVGPSL 100 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~ 100 (216)
.+|++.|=+|-...=..+++.|+++|+.|+.+|-+-+--+ ..+.++.+.++..+++++ +.+++.|+|+|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 4688888888776656799999999999999998765433 345677788888777776 678999999999
Q ss_pred hHHHHHHHHHhCc----cccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHP----EAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~----~~~~~lvli~~~~~ 127 (216)
|+-+......+-| ++|..++|+++...
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9988887777765 46899999998663
No 131
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=9.9e-07 Score=66.63 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=75.5
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCC-----CeEEEEcCCCC----CCCCCCC----------CCCCChhhHHHHHHH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAG-----LETWAVDILGW----GFSDLER----------LPPCNVTSKREHFYQ 83 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~----G~s~~~~----------~~~~~~~~~~~~~~~ 83 (216)
.-|.+|+||.+|+......++.+|.+.+ --+...|--|- |.-+... .-..+..++..++..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3578999999999999999999998873 12556666662 2111110 111245556666666
Q ss_pred HHHHh----cCCCeEEEeeChhHHHHHHHHHhCcc-----ccceEEEEccccc
Q 027952 84 LWKTY----IKRPMILVGPSLGAAVAVDFAVNHPE-----AVENLVFIDASVY 127 (216)
Q Consensus 84 ~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~~~~lvli~~~~~ 127 (216)
.+..+ +..++..+||||||.-..+|+..+.+ .++++|.++++..
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 66555 77899999999999999999997532 3899999999876
No 132
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.53 E-value=3.5e-07 Score=70.71 Aligned_cols=118 Identities=16% Similarity=0.051 Sum_probs=68.9
Q ss_pred eEEEeeeccCC--CC-CCCcEEEEcCCCCCcchH--HhhhhHHHhCC----CeEEEEcCCCCCCCC--CC------C--C
Q 027952 9 CIMSSVVKPLK--PS-KTSPVVLLHGFDSSCLEW--RCTYPLLEEAG----LETWAVDILGWGFSD--LE------R--L 69 (216)
Q Consensus 9 ~i~~~~~~~~~--~~-~~~~lv~~hG~~~~~~~~--~~~~~~l~~~g----~~v~~~d~~g~G~s~--~~------~--~ 69 (216)
..-...+.|.. .. +=|+|+++||.......+ ...++.+.+.| .-+++++.-+.+... .. . .
T Consensus 7 ~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (251)
T PF00756_consen 7 DRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRAD 86 (251)
T ss_dssp EEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCT
T ss_pred eEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccc
Confidence 33444444543 33 348889999983222222 23344444432 345666654444110 00 0 0
Q ss_pred CCCCh----hhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 70 PPCNV----TSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 70 ~~~~~----~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..... +...+++...+++. ...+..|+|+||||..|+.++.+||+.+.+++.+||..
T Consensus 87 ~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 87 DSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp STTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred cCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 11111 23445666666665 12228999999999999999999999999999999764
No 133
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.50 E-value=3.4e-07 Score=69.46 Aligned_cols=87 Identities=22% Similarity=0.263 Sum_probs=50.7
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhC--CCeEEEEcCCCCCCCCCCCCCCCChhhHHH----HHHHHHHHhcC--CCe
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEA--GLETWAVDILGWGFSDLERLPPCNVTSKRE----HFYQLWKTYIK--RPM 93 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~ 93 (216)
+...||++||+.|+...|..+.+.+... .+.--.+...+.-..... ...+++..++ ++.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccc
Confidence 3467999999999999998777777662 122111122221111111 1234454444 44444444433 489
Q ss_pred EEEeeChhHHHHHHHHH
Q 027952 94 ILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 94 ~l~G~S~Gg~~a~~~a~ 110 (216)
.++||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999998865544
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.48 E-value=3.9e-07 Score=66.74 Aligned_cols=114 Identities=11% Similarity=0.043 Sum_probs=75.3
Q ss_pred eEEEeeeccCCCCCCCcEEEEcCCC---CCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 027952 9 CIMSSVVKPLKPSKTSPVVLLHGFD---SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLW 85 (216)
Q Consensus 9 ~i~~~~~~~~~~~~~~~lv~~hG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 85 (216)
+...+.|.| ....+.+||+||.- ++....-..+..+.+.||+|...++ +.+.........+.+..+.+.-.+
T Consensus 55 ~q~VDIwg~--~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 55 RQLVDIWGS--TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred ceEEEEecC--CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHH
Confidence 555556654 45678999999854 4444444566677788999998854 555432111122333333333333
Q ss_pred HHh-cCCCeEEEeeChhHHHHHHHHHh-CccccceEEEEccccc
Q 027952 86 KTY-IKRPMILVGPSLGAAVAVDFAVN-HPEAVENLVFIDASVY 127 (216)
Q Consensus 86 ~~~-~~~~~~l~G~S~Gg~~a~~~a~~-~~~~~~~lvli~~~~~ 127 (216)
+.. +.+.+.+.|||.|+.+|++...+ +..+|.++++.+....
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 443 55679999999999999998775 5568999999887654
No 135
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.48 E-value=3.7e-06 Score=67.39 Aligned_cols=121 Identities=15% Similarity=0.105 Sum_probs=85.3
Q ss_pred CcceEEEeeeccCCC---CCCCcEEEEcCCC---CC--cchHHhhhhHHHh-CCCeEEEEcCCCCCCCCCCCCCCCChhh
Q 027952 6 SESCIMSSVVKPLKP---SKTSPVVLLHGFD---SS--CLEWRCTYPLLEE-AGLETWAVDILGWGFSDLERLPPCNVTS 76 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~---~~~~~lv~~hG~~---~~--~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 76 (216)
..+.+..+.+.|... ...|.||++||.| ++ ...++.++..+++ .+..|+.+|+|=--+.. .+..++|
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~----~Pa~y~D 145 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP----FPAAYDD 145 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC----CCccchH
Confidence 345567777777432 4568999999988 33 4567888888844 47888899988432222 2345566
Q ss_pred HHHHHHHHHHH-h-----cCCCeEEEeeChhHHHHHHHHHhC------ccccceEEEEccccccCC
Q 027952 77 KREHFYQLWKT-Y-----IKRPMILVGPSLGAAVAVDFAVNH------PEAVENLVFIDASVYAEG 130 (216)
Q Consensus 77 ~~~~~~~~~~~-~-----~~~~~~l~G~S~Gg~~a~~~a~~~------~~~~~~lvli~~~~~~~~ 130 (216)
-.+.+..+.++ + +.++++|+|-|.||++|...|.+. +-.+++.||+.|......
T Consensus 146 ~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 146 GWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 66655555554 1 667899999999999999998863 346899999999775443
No 136
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.47 E-value=1.2e-06 Score=67.69 Aligned_cols=117 Identities=16% Similarity=0.046 Sum_probs=73.7
Q ss_pred CCcceEEEeeeccCC---CCCC-CcEEEEcCCCCCcch-HHh-------hhhHHHhCCCeEEEEcCCC-CCCCCCCCCCC
Q 027952 5 FSESCIMSSVVKPLK---PSKT-SPVVLLHGFDSSCLE-WRC-------TYPLLEEAGLETWAVDILG-WGFSDLERLPP 71 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~---~~~~-~~lv~~hG~~~~~~~-~~~-------~~~~l~~~g~~v~~~d~~g-~G~s~~~~~~~ 71 (216)
..++.+.+.++.|+. +.+- |.++++||.+..... ... ++....+.++.|++|-+-- +-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----- 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-----
Confidence 467789999999842 2233 889999999865543 222 2223333334455444211 111221
Q ss_pred CChhhHHHHHHHHH-----HHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 72 CNVTSKREHFYQLW-----KTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 72 ~~~~~~~~~~~~~~-----~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
..+.+.....+++ ++. ..+++.++|.|+||.-+..++.++|+.+.+.++|+....
T Consensus 244 -~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 244 -KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred -ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 1222333333333 333 556899999999999999999999999999999998663
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.46 E-value=3.8e-06 Score=69.61 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=65.8
Q ss_pred CCCCcEEEEcCCCCCcc-hHHhhhhHHHhCCC----eEEEEcCCCCCCCCCCC---CCCCChhhHHHHHHHHHHHh----
Q 027952 21 SKTSPVVLLHGFDSSCL-EWRCTYPLLEEAGL----ETWAVDILGWGFSDLER---LPPCNVTSKREHFYQLWKTY---- 88 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~-~~~~~~~~l~~~g~----~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~---- 88 (216)
.+.|+|+++||-.-... .....+..|.+.|. -++.+|.... ..+.. ....-.+.+++++.-++++.
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~--~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~ 284 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT--THRSQELPCNADFWLAVQQELLPQVRAIAPFS 284 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc--ccccccCCchHHHHHHHHHHHHHHHHHhCCCC
Confidence 34588888998542111 12345556666653 3567775321 11111 01111233445665666654
Q ss_pred -cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 89 -IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 89 -~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..++..|+|+||||..|++.+.++|+.+.+++.+|++.
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34578999999999999999999999999999999875
No 138
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.46 E-value=3.2e-06 Score=71.09 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=79.2
Q ss_pred cceEEEeeeccC-CCCCCCcEEEEcCCCCCcchHHhhhh------------------HHHhCCCeEEEEcCC-CCCCCCC
Q 027952 7 ESCIMSSVVKPL-KPSKTSPVVLLHGFDSSCLEWRCTYP------------------LLEEAGLETWAVDIL-GWGFSDL 66 (216)
Q Consensus 7 ~~~i~~~~~~~~-~~~~~~~lv~~hG~~~~~~~~~~~~~------------------~l~~~g~~v~~~d~~-g~G~s~~ 66 (216)
+..+++-++... .+.+.|.++.++|..|.+..+..+.+ .+.+. ..++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccC
Confidence 445555555543 33457999999999887765422221 12333 678899975 8887765
Q ss_pred CC-CCCCChhhHHHHHHHHHHHh-------cCCCeEEEeeChhHHHHHHHHHhC----------ccccceEEEEcccc
Q 027952 67 ER-LPPCNVTSKREHFYQLWKTY-------IKRPMILVGPSLGAAVAVDFAVNH----------PEAVENLVFIDASV 126 (216)
Q Consensus 67 ~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------~~~~~~lvli~~~~ 126 (216)
.. ....+.++.++++.++++.. ...+++|+|||+||..+..+|.+- +-.++++++.++..
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 32 22345577778877777754 347899999999999998888752 11367888877754
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.45 E-value=5.4e-06 Score=65.56 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=78.6
Q ss_pred CCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchH-------HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhh
Q 027952 4 NFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEW-------RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTS 76 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 76 (216)
..++-.|.+.........+..-+++.-|.++.-+.. ..+.+...+.|-+|+.+++||.|.|.... +.++
T Consensus 118 q~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~d 193 (365)
T PF05677_consen 118 QYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKD 193 (365)
T ss_pred eeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHH
Confidence 344455555555433445667889998888665541 12334444557899999999999997652 4577
Q ss_pred HHHHHHHHHHHh-------cCCCeEEEeeChhHHHHHHHHHhCc----cccceEEEEcc
Q 027952 77 KREHFYQLWKTY-------IKRPMILVGPSLGAAVAVDFAVNHP----EAVENLVFIDA 124 (216)
Q Consensus 77 ~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~----~~~~~lvli~~ 124 (216)
++.+-+..++.+ ..+.+.+-|||+||.++..++.++. +-++.+++-+-
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDR 252 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDR 252 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecC
Confidence 777766666665 2257999999999999998666542 34555666543
No 140
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.45 E-value=6.1e-07 Score=72.52 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=81.1
Q ss_pred CCCcEEEEcCCCCCcchH-----HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHH-HHHHHHHHH----hcCC
Q 027952 22 KTSPVVLLHGFDSSCLEW-----RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKR-EHFYQLWKT----YIKR 91 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~-~~~~~~~~~----~~~~ 91 (216)
-++|++++|.+--....| ..++..|.++|+.|+.+|+++=..+. ...+++++. +.+.+.++. .+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~----~~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL----AAKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhh----hhccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 468999999988776655 35889999999999999998644333 245677766 444444443 3668
Q ss_pred CeEEEeeChhHHHHHHHHHhCccc-cceEEEEccccccCC
Q 027952 92 PMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDASVYAEG 130 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~~~-~~~lvli~~~~~~~~ 130 (216)
+++++|+|.||+++..+++.++.+ |+++++..++.....
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 899999999999999999998877 999999988775443
No 141
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.42 E-value=1.3e-05 Score=63.99 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=79.8
Q ss_pred cceEEEeeeccCCC-CCCCcEEEEcCCCCCcc---hHHhhhhHHHhCCCeEEEEcCCCC--CCCCC----------CC--
Q 027952 7 ESCIMSSVVKPLKP-SKTSPVVLLHGFDSSCL---EWRCTYPLLEEAGLETWAVDILGW--GFSDL----------ER-- 68 (216)
Q Consensus 7 ~~~i~~~~~~~~~~-~~~~~lv~~hG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~--G~s~~----------~~-- 68 (216)
+..-+...+.|... ...-.+|++||.+.+.+ ....+.+.|.++|+..+.+.+|.- ..... ..
T Consensus 70 ~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 70 GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 44555666666543 44579999999998875 356788899999999999988871 10000 00
Q ss_pred --CCC------------CChhhHHHHHHHHHHH-------hcCCCeEEEeeChhHHHHHHHHHhCcc-ccceEEEEcccc
Q 027952 69 --LPP------------CNVTSKREHFYQLWKT-------YIKRPMILVGPSLGAAVAVDFAVNHPE-AVENLVFIDASV 126 (216)
Q Consensus 69 --~~~------------~~~~~~~~~~~~~~~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~-~~~~lvli~~~~ 126 (216)
... .....+.+.+.+.+++ .+..+++|+||+.|+..++.+..+.+. .++++|+|++-.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 000 1122333333333332 244559999999999999999998764 489999999855
No 142
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.41 E-value=2.6e-06 Score=72.48 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=78.0
Q ss_pred CCcceEEEeeeccCC---CCCCCcEEEEcCCC---CCcchHHhhhhHHHhC--CCeEEEEcCC-C---CCCCCCCC-CCC
Q 027952 5 FSESCIMSSVVKPLK---PSKTSPVVLLHGFD---SSCLEWRCTYPLLEEA--GLETWAVDIL-G---WGFSDLER-LPP 71 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~---~~~~~~lv~~hG~~---~~~~~~~~~~~~l~~~--g~~v~~~d~~-g---~G~s~~~~-~~~ 71 (216)
.++..++...+.|.. ..+.|++|++||.+ ++...+ ....|.+. ++.|+.+++| | +..+.... ...
T Consensus 74 ~sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n 151 (493)
T cd00312 74 GSEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGN 151 (493)
T ss_pred CCCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcc
Confidence 356778888888854 34568999999965 333322 23344443 3899999999 3 32222111 122
Q ss_pred CChhh---HHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhC--ccccceEEEEccccc
Q 027952 72 CNVTS---KREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNH--PEAVENLVFIDASVY 127 (216)
Q Consensus 72 ~~~~~---~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~--~~~~~~lvli~~~~~ 127 (216)
..+.| ..+++.+-++.. +..+++|+|+|.||..+..++... +..++++|+.++...
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 23334 444555555555 556899999999999998888763 456899999887654
No 143
>PRK04940 hypothetical protein; Provisional
Probab=98.40 E-value=3.3e-06 Score=61.37 Aligned_cols=86 Identities=15% Similarity=0.239 Sum_probs=55.1
Q ss_pred cEEEEcCCCCCcch--HHhhhhHHH--hCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-c---CCCeEEE
Q 027952 25 PVVLLHGFDSSCLE--WRCTYPLLE--EAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-I---KRPMILV 96 (216)
Q Consensus 25 ~lv~~hG~~~~~~~--~~~~~~~l~--~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~l~ 96 (216)
.|+++||+.++... .+ ++.+. ..+.+++ +++ ..+..+..+.+.+.++.+ . .+++.|+
T Consensus 1 ~IlYlHGF~SS~~S~~~K--a~~l~~~~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 1 MIIYLHGFDSTSPGNHEK--VLQLQFIDPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred CEEEeCCCCCCCCccHHH--HHhheeeCCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 37999999998887 43 22222 1112222 221 123344444555555542 1 1579999
Q ss_pred eeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 97 GPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 97 G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
|.|+||..|.++|.++. + +.|||+|...+
T Consensus 66 GSSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred EeChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 99999999999999986 3 57888998754
No 144
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.36 E-value=1.7e-06 Score=69.13 Aligned_cols=91 Identities=22% Similarity=0.184 Sum_probs=63.2
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC--CCCCCCC------------CCCCChhhHHHHHHHH---
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW--GFSDLER------------LPPCNVTSKREHFYQL--- 84 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--G~s~~~~------------~~~~~~~~~~~~~~~~--- 84 (216)
.-|.|++-||.++....+..+.+.+++.||.|.+++++|- |..+... ...+++......+.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 3478889999999999999999999999999999999993 3332221 1112223333333332
Q ss_pred --H-HHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 85 --W-KTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 85 --~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
+ .++...++.++|||+||..++..+.-+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccc
Confidence 0 111345899999999999999887643
No 145
>COG3150 Predicted esterase [General function prediction only]
Probab=98.35 E-value=3.3e-06 Score=59.87 Aligned_cols=90 Identities=18% Similarity=0.235 Sum_probs=66.0
Q ss_pred EEEEcCCCCCcchHHh-hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHH
Q 027952 26 VVLLHGFDSSCLEWRC-TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAV 104 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 104 (216)
|+++||+.++....+. +..++-+. |.|-.+.+.+. ...+....++.+++++.....+...|+|-|+||..
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~--l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPH--LPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCC--CCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 8999999998887764 22333333 33333334332 45678889999999999997777999999999999
Q ss_pred HHHHHHhCccccceEEEEccccc
Q 027952 105 AVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 105 a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|.+++.++. +.++ ++.|...
T Consensus 73 At~l~~~~G--irav-~~NPav~ 92 (191)
T COG3150 73 ATWLGFLCG--IRAV-VFNPAVR 92 (191)
T ss_pred HHHHHHHhC--Chhh-hcCCCcC
Confidence 999999986 4444 4577654
No 146
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=1.9e-05 Score=59.72 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=83.9
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhhHHHhCC---CeEEEEcCCCCCCCC---CCC-----CCCCChhhHHHHHHHHHHHh
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAG---LETWAVDILGWGFSD---LER-----LPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g---~~v~~~d~~g~G~s~---~~~-----~~~~~~~~~~~~~~~~~~~~ 88 (216)
..+++.+++++|..|...+|.+++..|.+.- +.++.+...||-.-+ +.. .+.++++++++.-.++++..
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 3567888999999999999988888776541 559999999986543 111 35678999999999999998
Q ss_pred --cCCCeEEEeeChhHHHHHHHHHhCc--cccceEEEEcccc
Q 027952 89 --IKRPMILVGPSLGAAVAVDFAVNHP--EAVENLVFIDASV 126 (216)
Q Consensus 89 --~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~~lvli~~~~ 126 (216)
...+++++|||-|+.+.++...... -.|.+.++.-|..
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 4568999999999999999887432 3478888888765
No 147
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.34 E-value=1.1e-05 Score=64.27 Aligned_cols=119 Identities=17% Similarity=0.083 Sum_probs=79.8
Q ss_pred CcceEEEeeeccCCC--CCCCcEEEEcCCCCCcchHH-hh-hhHHHhCCCeEEEEcCCCCCCCCCCC---CCCCChhhHH
Q 027952 6 SESCIMSSVVKPLKP--SKTSPVVLLHGFDSSCLEWR-CT-YPLLEEAGLETWAVDILGWGFSDLER---LPPCNVTSKR 78 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~--~~~~~lv~~hG~~~~~~~~~-~~-~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~ 78 (216)
+...-...+..|... ..+|.+|.+.|.|.+....+ .+ +..|.+.|+..+.+..|-||.-.+.. ....+..|..
T Consensus 73 es~~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~ 152 (348)
T PF09752_consen 73 ESRTARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLF 152 (348)
T ss_pred hHhheEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHH
Confidence 334455566667543 56788888888877554332 34 88999999999999999998544332 1112232221
Q ss_pred -------HHHHHH---HHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 79 -------EHFYQL---WKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 79 -------~~~~~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
.+...+ +++.+..++.+.|.||||..|...|+..|..+..+-.+++
T Consensus 153 ~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 153 VMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 222233 3333778999999999999999999999987665555555
No 148
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.33 E-value=1.2e-06 Score=68.14 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=78.7
Q ss_pred cceEEEeeeccC-C-CCCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCC------CCCCCC------
Q 027952 7 ESCIMSSVVKPL-K-PSKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDL------ERLPPC------ 72 (216)
Q Consensus 7 ~~~i~~~~~~~~-~-~~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~------~~~~~~------ 72 (216)
..+++.....|. + .++=|.+||-||++++...|..++-.|+.+||-|.++++|-+..+.. +..+.+
T Consensus 100 s~r~~~~~n~~~~tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ 179 (399)
T KOG3847|consen 100 SKRVPCIENAPLSTKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIK 179 (399)
T ss_pred cccccccccCCCCCCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceE
Confidence 344444444442 2 23348999999999999999999999999999999999998643311 000000
Q ss_pred ----------------ChhhHHHHHHH---HHHHh------------------------cCCCeEEEeeChhHHHHHHHH
Q 027952 73 ----------------NVTSKREHFYQ---LWKTY------------------------IKRPMILVGPSLGAAVAVDFA 109 (216)
Q Consensus 73 ----------------~~~~~~~~~~~---~~~~~------------------------~~~~~~l~G~S~Gg~~a~~~a 109 (216)
....-++.+.. +++++ ..+++.++|||+||..++...
T Consensus 180 ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~s 259 (399)
T KOG3847|consen 180 IRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASS 259 (399)
T ss_pred eeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhh
Confidence 01112222222 22222 223689999999999999888
Q ss_pred HhCccccceEEEEccccc
Q 027952 110 VNHPEAVENLVFIDASVY 127 (216)
Q Consensus 110 ~~~~~~~~~lvli~~~~~ 127 (216)
+.+.+ ++..|+.++.-+
T Consensus 260 s~~t~-FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 260 SSHTD-FRCAIALDAWMF 276 (399)
T ss_pred ccccc-eeeeeeeeeeec
Confidence 88765 777888887554
No 149
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.30 E-value=5.2e-06 Score=73.87 Aligned_cols=83 Identities=14% Similarity=0.028 Sum_probs=63.6
Q ss_pred hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc--------------------CCCeEEEeeChh
Q 027952 42 TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI--------------------KRPMILVGPSLG 101 (216)
Q Consensus 42 ~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~G~S~G 101 (216)
+.+.|.++||.|+..|.||+|.|+... ...+ .+-.++..++++.+. ..++.++|.|+|
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~-~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP-TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC-ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 447888999999999999999998752 1221 223444444454442 468999999999
Q ss_pred HHHHHHHHHhCccccceEEEEcccc
Q 027952 102 AAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 102 g~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
|.++..+|+..|+.++++|.+++..
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCC
Confidence 9999999999888899999987753
No 150
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.28 E-value=1.6e-05 Score=66.61 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=67.3
Q ss_pred CCcEEEEcCCCCCcc-hH--HhhhhHHHhC-CCeEEEEcCCCCCCCCCCC------CCCCChhhHHHHHHHHHHHh----
Q 027952 23 TSPVVLLHGFDSSCL-EW--RCTYPLLEEA-GLETWAVDILGWGFSDLER------LPPCNVTSKREHFYQLWKTY---- 88 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~-~~--~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~---- 88 (216)
+|.+|++-| .++.. .| ..+...|++. |-.++.+++|-+|+|.+.. ....+.++..+|+..+++++
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 565666644 44443 22 2244455544 6789999999999997532 23357788888888888776
Q ss_pred ---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 89 ---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 89 ---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
...|++++|-|.||++|.++-.+||+.+.+.+.-|++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 234899999999999999999999999999999888774
No 151
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.28 E-value=5.5e-06 Score=65.89 Aligned_cols=106 Identities=13% Similarity=0.156 Sum_probs=70.1
Q ss_pred CCCCcEEEEcCCCCCcc-hHHhhhhHHHhCCC--eEEEEcCCCCCCCCC----CCCCCCChhhHHHHHHHHHHHhcCCCe
Q 027952 21 SKTSPVVLLHGFDSSCL-EWRCTYPLLEEAGL--ETWAVDILGWGFSDL----ERLPPCNVTSKREHFYQLWKTYIKRPM 93 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~-~~~~~~~~l~~~g~--~v~~~d~~g~G~s~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (216)
..+..+||+||++-+.+ .-.++++...+.|+ ..+.+.+|..|..-. ..+..++-.++...+..+.+.....++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 45788999999996654 45667777776664 478889998765311 001223333343344444344456789
Q ss_pred EEEeeChhHHHHHHHHHh--------CccccceEEEEcccc
Q 027952 94 ILVGPSLGAAVAVDFAVN--------HPEAVENLVFIDASV 126 (216)
Q Consensus 94 ~l~G~S~Gg~~a~~~a~~--------~~~~~~~lvli~~~~ 126 (216)
+|++||||.++++....+ .+..++-+||-+|-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 999999999998877554 234578899988755
No 152
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.27 E-value=7.9e-06 Score=67.55 Aligned_cols=124 Identities=19% Similarity=0.181 Sum_probs=81.1
Q ss_pred CCCcceEEEeeeccC-CCCCCCcEEEEcCCC---CCcchHHhhhhHHHhCC-CeEEEEcCCC--CCCCCCCC-------C
Q 027952 4 NFSESCIMSSVVKPL-KPSKTSPVVLLHGFD---SSCLEWRCTYPLLEEAG-LETWAVDILG--WGFSDLER-------L 69 (216)
Q Consensus 4 ~~~~~~i~~~~~~~~-~~~~~~~lv~~hG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~g--~G~s~~~~-------~ 69 (216)
..++..++.-.|.|. ...+.|++|+|||.+ |+...-.---..|++.| +-|+.+++|= +|.-+.+. .
T Consensus 74 ~~sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 74 TGSEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFA 153 (491)
T ss_pred CccccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccc
Confidence 346677889999998 444569999999965 33333222346788887 7788887762 11111110 1
Q ss_pred CCCChhh---HHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHh--CccccceEEEEccccc
Q 027952 70 PPCNVTS---KREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVN--HPEAVENLVFIDASVY 127 (216)
Q Consensus 70 ~~~~~~~---~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~--~~~~~~~lvli~~~~~ 127 (216)
....+.| ..+++.+-|++. +.++|.|.|+|.|++.++.+.+- ....+.++|+.|+...
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 1123344 445677777887 55689999999999988777664 2346788888888663
No 153
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.27 E-value=2.5e-06 Score=62.84 Aligned_cols=125 Identities=14% Similarity=0.108 Sum_probs=80.6
Q ss_pred CcceEEEeeeccCCCC--CCCcEEEEcCCCCCcchHH---hhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCC--------
Q 027952 6 SESCIMSSVVKPLKPS--KTSPVVLLHGFDSSCLEWR---CTYPLLEEAGLETWAVDILGWGFSDLERLPPC-------- 72 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~--~~~~lv~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~-------- 72 (216)
.-.+.+..+..|.... .-|+++++.|+.++.+.+. .+-+...++|+.|+.+|-.-.|..-....+.+
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 3345555666554333 3589999999999988763 24556678899999999754442111100111
Q ss_pred ----ChhhHHH----------HHHHHHHH----hcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCC
Q 027952 73 ----NVTSKRE----------HFYQLWKT----YIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEG 130 (216)
Q Consensus 73 ----~~~~~~~----------~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~ 130 (216)
+.+.+++ .+-+++.. +...++.|.||||||.=|+..+.++|.+.+++-..+|-..+-.
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPIN 180 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCccc
Confidence 1222222 33333331 1345799999999999999999999999999888888765443
No 154
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.22 E-value=1.1e-05 Score=68.34 Aligned_cols=121 Identities=14% Similarity=0.043 Sum_probs=88.7
Q ss_pred CCcceEEEeeeccCCC---CCCCcEEEEcCCCCCc-----chHHhh--hhHHHhCCCeEEEEcCCCCCCCCC-------C
Q 027952 5 FSESCIMSSVVKPLKP---SKTSPVVLLHGFDSSC-----LEWRCT--YPLLEEAGLETWAVDILGWGFSDL-------E 67 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~---~~~~~lv~~hG~~~~~-----~~~~~~--~~~l~~~g~~v~~~d~~g~G~s~~-------~ 67 (216)
.++..++...++|.+- .+-|+++++=|..+-. ..|... ...|+..||.|+.+|-||.-.-.. .
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~ 700 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKK 700 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhh
Confidence 3566777888888542 2348899998877532 223222 347888999999999998421110 1
Q ss_pred CCCCCChhhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccc
Q 027952 68 RLPPCNVTSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
......++|+++-+.-+.++. ..+++.|-|+|.||.+++...+++|+.++..|.-+|.
T Consensus 701 kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 701 KMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred ccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 144567899999999999987 6678999999999999999999999977777765553
No 155
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.20 E-value=1.5e-05 Score=69.03 Aligned_cols=105 Identities=19% Similarity=0.207 Sum_probs=70.4
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHh----------------CCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEE----------------AGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLW 85 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 85 (216)
.+-||+|++|..|+-.+.+.++..... ..|+.++.|.-+ +..........+++|.+.+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHHHH
Confidence 578999999999999888776654431 125566666543 111133445677777666666
Q ss_pred HHh-----c--------CCCeEEEeeChhHHHHHHHHHh---CccccceEEEEccccccCC
Q 027952 86 KTY-----I--------KRPMILVGPSLGAAVAVDFAVN---HPEAVENLVFIDASVYAEG 130 (216)
Q Consensus 86 ~~~-----~--------~~~~~l~G~S~Gg~~a~~~a~~---~~~~~~~lvli~~~~~~~~ 130 (216)
+.. + +..++|+||||||.+|-..+.. .++.|+-++..+++.....
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~P 224 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPP 224 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCC
Confidence 543 1 2349999999999999877763 3566888888888764433
No 156
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.20 E-value=8.1e-06 Score=67.32 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=60.0
Q ss_pred hHHhhhhHHHhCCCeE----E-E-EcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHH
Q 027952 38 EWRCTYPLLEEAGLET----W-A-VDILGWGFSDLERLPPCNVTSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDF 108 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~v----~-~-~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~ 108 (216)
.|..+++.|.+.||.. + + +|+|= .....+++...+.++++.. ..++++|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---------~~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---------SPAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---------chhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 5889999999988762 2 2 56652 1114456666666666665 46799999999999999999
Q ss_pred HHhCcc------ccceEEEEccccc
Q 027952 109 AVNHPE------AVENLVFIDASVY 127 (216)
Q Consensus 109 a~~~~~------~~~~lvli~~~~~ 127 (216)
....+. .|+++|.++++..
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 887642 5999999999764
No 157
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.17 E-value=3.4e-05 Score=62.45 Aligned_cols=107 Identities=19% Similarity=0.168 Sum_probs=72.6
Q ss_pred CCCCcEEEEcCCCCCcc-------hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCe
Q 027952 21 SKTSPVVLLHGFDSSCL-------EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPM 93 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (216)
...|.|+++||.|=... ....+...|.+ ..+++.|+.-....+.....+..+.+.++....+++..+.+++
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~--~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPE--VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCC--CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeE
Confidence 34699999999872222 22334444442 5899999865431111112445677788888888877778899
Q ss_pred EEEeeChhHHHHHHHHHhC--cc---ccceEEEEccccccC
Q 027952 94 ILVGPSLGAAVAVDFAVNH--PE---AVENLVFIDASVYAE 129 (216)
Q Consensus 94 ~l~G~S~Gg~~a~~~a~~~--~~---~~~~lvli~~~~~~~ 129 (216)
+|+|-|.||.+++.+.... ++ .-+++|||+|.....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999998887642 11 247999999987654
No 158
>PLN02606 palmitoyl-protein thioesterase
Probab=98.09 E-value=7.8e-05 Score=58.51 Aligned_cols=102 Identities=20% Similarity=0.160 Sum_probs=70.3
Q ss_pred CCCcEEEEcCCC--CCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh--cCCCeEEE
Q 027952 22 KTSPVVLLHGFD--SSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY--IKRPMILV 96 (216)
Q Consensus 22 ~~~~lv~~hG~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 96 (216)
...|||+.||++ ++......+.+.+.+. |+.+..+. .|- +....-.....++++.+.+.+... ...-++++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~---~~~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGN---GVQDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECC---CcccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 568999999999 6666777777777533 56555554 221 111112235566666666665553 22359999
Q ss_pred eeChhHHHHHHHHHhCcc--ccceEEEEccccc
Q 027952 97 GPSLGAAVAVDFAVNHPE--AVENLVFIDASVY 127 (216)
Q Consensus 97 G~S~Gg~~a~~~a~~~~~--~~~~lvli~~~~~ 127 (216)
|+|.||.++=.++.+.|+ .|+.+|.++++..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999998876 4999999999763
No 159
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.99 E-value=4.3e-05 Score=56.33 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=74.2
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCC-----------------CCCCCChhhHHHHHHHHH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLE-----------------RLPPCNVTSKREHFYQLW 85 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-----------------~~~~~~~~~~~~~~~~~~ 85 (216)
..+||++||.+.+...|..+++.|.-.....+.+..|-.-.+... .....++...++.+.+++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 357999999999999998888887666566666644432111110 012335566777777888
Q ss_pred HHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 86 KTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 86 ~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
++. ...++.+.|.|+||.++++.+..++..+.++.-.++..
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 776 33568999999999999999999987777777766543
No 160
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.97 E-value=4.7e-05 Score=65.23 Aligned_cols=122 Identities=15% Similarity=0.082 Sum_probs=71.3
Q ss_pred CcceEEEeeeccCCCCC---CCcEEEEcCCC---CCcc-hHHhhhhHHHhCCCeEEEEcCCC----CCCCCCCC-C-CCC
Q 027952 6 SESCIMSSVVKPLKPSK---TSPVVLLHGFD---SSCL-EWRCTYPLLEEAGLETWAVDILG----WGFSDLER-L-PPC 72 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~---~~~lv~~hG~~---~~~~-~~~~~~~~l~~~g~~v~~~d~~g----~G~s~~~~-~-~~~ 72 (216)
++..++...+.|..... -|++|+|||.+ |+.. ....-...+.+.+.-|+.+++|= |-.+.... . ..+
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 56788999999865543 49999999976 3331 22233344556679999998873 32222111 1 344
Q ss_pred ChhhHHH---HHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhC--ccccceEEEEccccc
Q 027952 73 NVTSKRE---HFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNH--PEAVENLVFIDASVY 127 (216)
Q Consensus 73 ~~~~~~~---~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~--~~~~~~lvli~~~~~ 127 (216)
.+.|+.. ++.+-|.+. +.++|+|.|+|.||..+...+... ...++++|+.|++..
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4555544 444555555 456899999999999887777752 357999999998664
No 161
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.91 E-value=6.9e-05 Score=56.65 Aligned_cols=105 Identities=16% Similarity=0.035 Sum_probs=54.6
Q ss_pred CCCcEEEEcCCCCCcchHHh----hhhHHHhCCCeEEEEcCCCCC-----CCC------------CC------CC----C
Q 027952 22 KTSPVVLLHGFDSSCLEWRC----TYPLLEEAGLETWAVDILGWG-----FSD------------LE------RL----P 70 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~g~G-----~s~------------~~------~~----~ 70 (216)
+++-||++||++.+...++. +.+.|.+.++..+.+|-|--- -.. .+ .. .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999987654 556666634888877765321 000 00 00 1
Q ss_pred CCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc--------cccceEEEEccccc
Q 027952 71 PCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP--------EAVENLVFIDASVY 127 (216)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--------~~~~~lvli~~~~~ 127 (216)
...+++..+.+.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++...
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 23455566666666666433 4689999999999999987421 23688999987653
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=97.88 E-value=8.6e-05 Score=59.23 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=71.0
Q ss_pred CCCcEEEEcCCCCCcchH---HhhhhHHHhCCCeEEEEcCC--------------CCCCCCCCC--C----C-CCChhhH
Q 027952 22 KTSPVVLLHGFDSSCLEW---RCTYPLLEEAGLETWAVDIL--------------GWGFSDLER--L----P-PCNVTSK 77 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------g~G~s~~~~--~----~-~~~~~~~ 77 (216)
+-|+++++||..++...| ..+-+...++|..++.+|-. |-+.|--.+ . . .|.++++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 447788899999886443 34556667778888887433 322221111 1 1 2555554
Q ss_pred H-HHHHHHHHHh-c--C--CCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 78 R-EHFYQLWKTY-I--K--RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 78 ~-~~~~~~~~~~-~--~--~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
. +++-..+++. . . +...|+||||||.=|+.+|++||+++..+...++....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 3 3444344443 2 1 26899999999999999999999999999998886643
No 163
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.87 E-value=0.00013 Score=65.08 Aligned_cols=120 Identities=17% Similarity=0.174 Sum_probs=83.8
Q ss_pred CcceEEEeeeccCC---CCCCCcEEEEcCCCCCcc-------hHHhhhhHHHhCCCeEEEEcCCCCCCCCCC-------C
Q 027952 6 SESCIMSSVVKPLK---PSKTSPVVLLHGFDSSCL-------EWRCTYPLLEEAGLETWAVDILGWGFSDLE-------R 68 (216)
Q Consensus 6 ~~~~i~~~~~~~~~---~~~~~~lv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-------~ 68 (216)
++....+....|.. ..+=|.+|.+||..++.. .|... .+...|+.|+.+|.||.|.-... .
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~ 583 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRN 583 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhh
Confidence 44455566666632 223366777888876332 23322 45667999999999998754332 1
Q ss_pred CCCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccc-cceEEEEccccc
Q 027952 69 LPPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEA-VENLVFIDASVY 127 (216)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~-~~~lvli~~~~~ 127 (216)
......+|..+.+..+++.. ..+++.|.|+|.||.+++..+.+.|+. ++..|.++|...
T Consensus 584 lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 584 LGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred cCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 33456777777777777766 567899999999999999999999854 455599999764
No 164
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.84 E-value=0.00034 Score=55.09 Aligned_cols=103 Identities=21% Similarity=0.219 Sum_probs=70.0
Q ss_pred CCCCcEEEEcCCCCCcc--hHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh--cCCCeEE
Q 027952 21 SKTSPVVLLHGFDSSCL--EWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY--IKRPMIL 95 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~--~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 95 (216)
....|+|+.||+|.+.. ....+.+.+.+. |..++.+.. |.+... .-.....++++.+.+.+... ...-+++
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~-s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGD-SWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccc-cceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 34579999999995543 345555555442 556665543 444322 23345666777666666554 2234999
Q ss_pred EeeChhHHHHHHHHHhCcc--ccceEEEEccccc
Q 027952 96 VGPSLGAAVAVDFAVNHPE--AVENLVFIDASVY 127 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~--~~~~lvli~~~~~ 127 (216)
+|+|.||.++=.++.+.|+ .|..+|.++++..
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999998876 5999999998753
No 165
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.77 E-value=3.4e-05 Score=59.95 Aligned_cols=106 Identities=24% Similarity=0.310 Sum_probs=57.2
Q ss_pred CCCCcEEEEcCCCCCc---chHHhhhhHHHhC--CCeEEEEcCCCCCCC-CCCCCCCCChhhHHHHHHHHHHHh--cCCC
Q 027952 21 SKTSPVVLLHGFDSSC---LEWRCTYPLLEEA--GLETWAVDILGWGFS-DLERLPPCNVTSKREHFYQLWKTY--IKRP 92 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~---~~~~~~~~~l~~~--g~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 92 (216)
....|||+.||+|.+. ..+..+.+.+.+. |--|+.++. |-+.+ +......-+..+.++.+.+.++.. -..-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 4567999999999653 3455555544443 455666655 22111 100011134566666666666654 2245
Q ss_pred eEEEeeChhHHHHHHHHHhCcc-ccceEEEEccccc
Q 027952 93 MILVGPSLGAAVAVDFAVNHPE-AVENLVFIDASVY 127 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~~~-~~~~lvli~~~~~ 127 (216)
++++|+|.||.++=.++.+.++ .|..+|.++++..
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999888888753 5999999998753
No 166
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.74 E-value=0.0012 Score=50.84 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=42.3
Q ss_pred hhHHHHHHHHH----HHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 75 TSKREHFYQLW----KTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 75 ~~~~~~~~~~~----~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
+.+.+.+.+-+ ++. +.++..++|||+||.+++.....+|+.+...++++|+...
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred HHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 44555544433 332 4557999999999999999999999999999999998643
No 167
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.65 E-value=0.00093 Score=55.53 Aligned_cols=120 Identities=14% Similarity=0.203 Sum_probs=76.5
Q ss_pred CcceEEEeeeccCC-CCCCCcEEEEcCCCCCcchHHhhhh-------------------HHHhCCCeEEEEc-CCCCCCC
Q 027952 6 SESCIMSSVVKPLK-PSKTSPVVLLHGFDSSCLEWRCTYP-------------------LLEEAGLETWAVD-ILGWGFS 64 (216)
Q Consensus 6 ~~~~i~~~~~~~~~-~~~~~~lv~~hG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d-~~g~G~s 64 (216)
.+..+++-++.... +.++|.+|.+.|..|++..+..+.+ .+.+. .+++.+| ..|.|.|
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS 100 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFS 100 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEe
Confidence 34556655555433 3567899999999988877644332 22233 7899999 4589988
Q ss_pred CCCCC--CCCChhhHHHHHHHHHHHh-------cCCCeEEEeeChhHHHHHHHHHh----C------ccccceEEEEccc
Q 027952 65 DLERL--PPCNVTSKREHFYQLWKTY-------IKRPMILVGPSLGAAVAVDFAVN----H------PEAVENLVFIDAS 125 (216)
Q Consensus 65 ~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------~~~~~~lvli~~~ 125 (216)
..... ...+.++.++++.++++.. ...+++|.|.|.||..+..+|.. . +-.++++++.++.
T Consensus 101 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 101 YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGW 180 (415)
T ss_dssp EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-
T ss_pred eccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcc
Confidence 76542 2346777888877777765 34489999999999977777664 2 2347899988875
Q ss_pred c
Q 027952 126 V 126 (216)
Q Consensus 126 ~ 126 (216)
.
T Consensus 181 ~ 181 (415)
T PF00450_consen 181 I 181 (415)
T ss_dssp S
T ss_pred c
Confidence 5
No 168
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.59 E-value=0.00019 Score=61.05 Aligned_cols=87 Identities=10% Similarity=0.071 Sum_probs=59.7
Q ss_pred hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHh----cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 38 EWRCTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTY----IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
.|..+++.|++.||. --++.|..+-.+.. .....-+.+-..+.++++.. +.++++|+||||||.++.++....
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 568999999999998 45666554433321 11122345555566666654 367999999999999999987632
Q ss_pred c---------------cccceEEEEcccc
Q 027952 113 P---------------EAVENLVFIDASV 126 (216)
Q Consensus 113 ~---------------~~~~~lvli~~~~ 126 (216)
. +.|++.|.|+++.
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred cccccccCCcchHHHHHHHHHheeccccc
Confidence 1 2478999999865
No 169
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.0015 Score=50.17 Aligned_cols=99 Identities=23% Similarity=0.291 Sum_probs=68.4
Q ss_pred CcEEEEcCCCCCcch--HHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh--cCCCeEEEee
Q 027952 24 SPVVLLHGFDSSCLE--WRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY--IKRPMILVGP 98 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~ 98 (216)
.|+|++||++..... ...+.+.+.+. |..+++.|. |-| ... .......++++.+.+.+... ..+-++++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~-s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKD-SSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cch-hhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 789999999976654 66677777666 788888886 333 111 12334666666666666554 3345999999
Q ss_pred ChhHHHHHHHHHhCc-cccceEEEEcccc
Q 027952 99 SLGAAVAVDFAVNHP-EAVENLVFIDASV 126 (216)
Q Consensus 99 S~Gg~~a~~~a~~~~-~~~~~lvli~~~~ 126 (216)
|.||.++=.++...+ ..|...|.++++.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999998877766543 2378888888764
No 170
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.53 E-value=0.00032 Score=52.38 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCcEEEEcCCCCCcc---hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeE
Q 027952 22 KTSPVVLLHGFDSSCL---EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMI 94 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 94 (216)
.+.-|||+-|++...- ...++...|-+.+|.++.+-++.+-. .....++.+-++++..+++++ .-..++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~----G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN----GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc----ccccccccccHHHHHHHHHHhhccCcccceE
Confidence 3467888988885443 34678899999999999987775311 123356777889999999987 223899
Q ss_pred EEeeChhHHHHHHHHHh--CccccceEEEEccccccC
Q 027952 95 LVGPSLGAAVAVDFAVN--HPEAVENLVFIDASVYAE 129 (216)
Q Consensus 95 l~G~S~Gg~~a~~~a~~--~~~~~~~lvli~~~~~~~ 129 (216)
|+|||.|+.-.++|..+ .+..+.+.|+-+|.-..+
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999999999854 356688888888865433
No 171
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.52 E-value=0.00022 Score=53.21 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=70.0
Q ss_pred CcEEEEcCCCCCcch-HHhhhhHHHhCCCeEEEEcCCCCCCCCCCC---------CCCCChhhHHHHHHHHHHHh----c
Q 027952 24 SPVVLLHGFDSSCLE-WRCTYPLLEEAGLETWAVDILGWGFSDLER---------LPPCNVTSKREHFYQLWKTY----I 89 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---------~~~~~~~~~~~~~~~~~~~~----~ 89 (216)
..||++.-+-|.... -+..+..++.+||.|+.||+-. |+-..+. ....+..-.-+++..+++.+ .
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 567777776665554 7788999999999999999863 3111110 11223333344455555544 3
Q ss_pred CCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 90 KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 90 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..++.++|+||||.++..+....| .+.++|..-|+.
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 668999999999999999999888 578888877765
No 172
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.50 E-value=0.0014 Score=54.50 Aligned_cols=108 Identities=15% Similarity=0.119 Sum_probs=82.1
Q ss_pred CCCCCcEEEEcCCCCCcchHH-----hhhhHHHhCCCeEEEEcCCCCCCCCCCC------CCCCChhhHHHHHHHHHHHh
Q 027952 20 PSKTSPVVLLHGFDSSCLEWR-----CTYPLLEEAGLETWAVDILGWGFSDLER------LPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~ 88 (216)
..++|..++|-|=+.....|. .+....++.|-.|+..++|-+|.|.+-. ....+.+....|+..+++++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456788888888775555552 3445556668899999999999886532 11235677777888888877
Q ss_pred -------cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 89 -------IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 89 -------~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
...+.+..|-|.-|.++.++=.++|+.+-+.|.-+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 223899999999999999999999999999988777764
No 173
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.49 E-value=0.0022 Score=53.79 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=68.6
Q ss_pred CCCCcEEEEcCC-------CCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----c
Q 027952 21 SKTSPVVLLHGF-------DSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----I 89 (216)
Q Consensus 21 ~~~~~lv~~hG~-------~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~ 89 (216)
..++|+|++-.- ||.... ..+...|.. |+.||.+...-. + .+.-++++.......+++.. .
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~d-SevG~AL~~-GHPvYFV~F~p~-----P-~pgQTl~DV~~ae~~Fv~~V~~~hp 137 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPD-SEVGVALRA-GHPVYFVGFFPE-----P-EPGQTLEDVMRAEAAFVEEVAERHP 137 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcc-cHHHHHHHc-CCCeEEEEecCC-----C-CCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 445666666322 222221 234556654 799998865421 1 24457888887777777776 2
Q ss_pred -CCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 90 -KRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 90 -~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
..+.+|+|.|.||+.++.+|+.+|+.+..+|+.+++.
T Consensus 138 ~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 138 DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 2389999999999999999999999999999988865
No 174
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.46 E-value=0.00095 Score=54.29 Aligned_cols=103 Identities=18% Similarity=0.113 Sum_probs=71.0
Q ss_pred CcEEEEcCCCCCcchHHh---hh-hHHHhCCCeEEEEcCCCCCCCCCCCCC---------CCChhhHHHHHHHHHHHh--
Q 027952 24 SPVVLLHGFDSSCLEWRC---TY-PLLEEAGLETWAVDILGWGFSDLERLP---------PCNVTSKREHFYQLWKTY-- 88 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~---~~-~~l~~~g~~v~~~d~~g~G~s~~~~~~---------~~~~~~~~~~~~~~~~~~-- 88 (216)
-||++--|-.|+.+.+.. +. +.-.+.+--++.+++|-+|+|-+-... -.+.++...|...++..+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 678888888877764421 22 222333456889999999998653211 113344444555555554
Q ss_pred ----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 89 ----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 89 ----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
...+++..|-|.||++|.++=.+||+.+.+.+.-+++.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 44689999999999999999999999888887766665
No 175
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.44 E-value=0.00042 Score=49.48 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=31.6
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCcc----ccceEEEEccccc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHPE----AVENLVFIDASVY 127 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~~----~~~~lvli~~~~~ 127 (216)
+..+++++|||+||.+|..++..... ....++..+++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 56789999999999999999987654 4667777777654
No 176
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.40 E-value=0.00052 Score=52.23 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC----ccccceEEEEccccccCC
Q 027952 75 TSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH----PEAVENLVFIDASVYAEG 130 (216)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----~~~~~~lvli~~~~~~~~ 130 (216)
...++.+.++++.... ++.+.|||.||.+|.+.|+.. .++|.++...++++....
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~ 127 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEE 127 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChh
Confidence 3444555555555444 599999999999999999974 357899999999886543
No 177
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.34 E-value=0.0026 Score=47.33 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=65.6
Q ss_pred CCCcEEEEcCCCC-CcchHH---------------hhhhHHHhCCCeEEEEcCCCC---CCCCCCCCCCCChhhHHHHHH
Q 027952 22 KTSPVVLLHGFDS-SCLEWR---------------CTYPLLEEAGLETWAVDILGW---GFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 22 ~~~~lv~~hG~~~-~~~~~~---------------~~~~~l~~~g~~v~~~d~~g~---G~s~~~~~~~~~~~~~~~~~~ 82 (216)
....+|+|||.|- .+..|. ++.+...+.||.|+..+.--+ -.+.+.+ ..| +..-++...
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np-~ky-irt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNP-QKY-IRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCc-chh-ccchHHHHH
Confidence 4458999999883 334552 334555667999998876421 1122221 111 122233333
Q ss_pred ----HHHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccceEEEEcccc
Q 027952 83 ----QLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVENLVFIDASV 126 (216)
Q Consensus 83 ----~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~lvli~~~~ 126 (216)
.++.......+.++.||.||...+.+..++|+ +|.++.|.+++.
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33333466789999999999999999999874 677888877763
No 178
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.32 E-value=0.00042 Score=59.13 Aligned_cols=137 Identities=12% Similarity=-0.001 Sum_probs=91.7
Q ss_pred CcceEEEeeeccC---CCCCCCcEEEEcCCCC-Cc-chHHhhhhHHHhCCCeEEEEcCCCCCCCCC---CC----CCCCC
Q 027952 6 SESCIMSSVVKPL---KPSKTSPVVLLHGFDS-SC-LEWRCTYPLLEEAGLETWAVDILGWGFSDL---ER----LPPCN 73 (216)
Q Consensus 6 ~~~~i~~~~~~~~---~~~~~~~lv~~hG~~~-~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~---~~----~~~~~ 73 (216)
+|..|.+..+.-. ..+..|.+|..+|.-+ +- ..|+.-..-|-+.|+.....|.||=|+-.. .. -...+
T Consensus 450 DGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~ 529 (712)
T KOG2237|consen 450 DGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNS 529 (712)
T ss_pred CCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhccc
Confidence 5556666655521 2345677766665332 22 246554455666899999999999654322 11 23457
Q ss_pred hhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccccCCCCCCCCchhhHH
Q 027952 74 VTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYAEGTGNSAKLPSIIA 142 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~~~~~~~~~~~~~~~ 142 (216)
++++......+++.- ...+..+.|.|.||.++..+..++|+.+.++|+--|......+....-.+....
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~s 600 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTS 600 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchh
Confidence 888888888888776 677899999999999999999999999999998777654433333333333333
No 179
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.31 E-value=0.00069 Score=51.24 Aligned_cols=50 Identities=24% Similarity=0.223 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 77 KREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 77 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
+.+...+++.+. ..+++.|+|.|.||-+|+.+|..+| .|+++|.++|+..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344444455544 3468999999999999999999999 5999999999764
No 180
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.27 E-value=0.0048 Score=47.13 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=52.2
Q ss_pred hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCCh-hhHHHHHHHHHHHh----c----CCCeEEEeeChhHHHHHHH
Q 027952 38 EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNV-TSKREHFYQLWKTY----I----KRPMILVGPSLGAAVAVDF 108 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~-~~~~~~~~~~~~~~----~----~~~~~l~G~S~Gg~~a~~~ 108 (216)
.|+.+++.|+++||.|++.-+.- +..+..+ .+..+..+..++.+ . .-+++-+|||+|+.+-+..
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy~~-------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi 107 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPYVV-------TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLI 107 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEecCC-------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHH
Confidence 58899999999999999986631 1111111 11111222222222 1 1367889999999998888
Q ss_pred HHhCccccceEEEEcccc
Q 027952 109 AVNHPEAVENLVFIDASV 126 (216)
Q Consensus 109 a~~~~~~~~~lvli~~~~ 126 (216)
...++..-++.|+++-.-
T Consensus 108 ~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 108 GSLFDVERAGNILISFNN 125 (250)
T ss_pred hhhccCcccceEEEecCC
Confidence 877765557788888643
No 181
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.18 E-value=0.00094 Score=46.69 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
...+.+.++.++....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3444555544454556799999999999999998863
No 182
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0072 Score=45.28 Aligned_cols=102 Identities=25% Similarity=0.119 Sum_probs=64.8
Q ss_pred CCCcEEEEcCCCCCcchHH----hhhhHHHhCCCeEEEEcCCC------CCCCCC-------C----------------C
Q 027952 22 KTSPVVLLHGFDSSCLEWR----CTYPLLEEAGLETWAVDILG------WGFSDL-------E----------------R 68 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~g------~G~s~~-------~----------------~ 68 (216)
.++-|+|+||+..+...+. .+-+.+.+. +..+.+|-|- .-.+.+ + .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4578999999999887664 355677777 8888888772 101111 0 0
Q ss_pred CCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHh---------CccccceEEEEcccc
Q 027952 69 LPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVN---------HPEAVENLVFIDASV 126 (216)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~~~~~~~lvli~~~~ 126 (216)
.....++.-.+.+.+.++.. ..--.|+|+|.|+.++..++.. +|. ++-+|+++...
T Consensus 83 ~~~~~~eesl~yl~~~i~en-GPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~-~kF~v~~SGf~ 147 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN-GPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPP-FKFAVFISGFK 147 (230)
T ss_pred ccccChHHHHHHHHHHHHHh-CCCccccccchhHHHHHHhhcccccCCcccCCCC-eEEEEEEecCC
Confidence 01112344455555555554 2334899999999999999882 222 57888888754
No 183
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.03 E-value=0.0017 Score=51.48 Aligned_cols=86 Identities=19% Similarity=0.024 Sum_probs=50.7
Q ss_pred hhhhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhC----
Q 027952 41 CTYPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNH---- 112 (216)
Q Consensus 41 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~---- 112 (216)
.++..+-++||.|+++|+.|-|...... ...+..-|.+....++.... ...++.++|||.||.-+...|...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 4667777889999999999998732111 11122222222222222211 135799999999999877666432
Q ss_pred ccc---cceEEEEcccc
Q 027952 113 PEA---VENLVFIDASV 126 (216)
Q Consensus 113 ~~~---~~~lvli~~~~ 126 (216)
|+. +.+.+..+++.
T Consensus 97 peL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 97 PELNRDLVGAAAGGPPA 113 (290)
T ss_pred cccccceeEEeccCCcc
Confidence 442 45666655544
No 184
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.98 E-value=0.0074 Score=49.13 Aligned_cols=83 Identities=19% Similarity=0.125 Sum_probs=61.4
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeEEEeeCh
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMILVGPSL 100 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~ 100 (216)
.-||..|-||-.+.=+.+.++|.++|+.|+.+|-.=+- ....+.++.+.|+..+++.+ +..++.|+|+|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYf------W~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYF------WSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhh------hccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 34666666655544456889999999999999965433 23456788888888888776 567899999999
Q ss_pred hHHHHHHHHHhCc
Q 027952 101 GAAVAVDFAVNHP 113 (216)
Q Consensus 101 Gg~~a~~~a~~~~ 113 (216)
|+-+....-.+.|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9987766555544
No 185
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.88 E-value=0.011 Score=49.55 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=72.8
Q ss_pred cCCCCCCCcEEEEcCCCCCcchHHhhhh--------H-----------HHhCCCeEEEEc-CCCCCCCCC-CCCCCCChh
Q 027952 17 PLKPSKTSPVVLLHGFDSSCLEWRCTYP--------L-----------LEEAGLETWAVD-ILGWGFSDL-ERLPPCNVT 75 (216)
Q Consensus 17 ~~~~~~~~~lv~~hG~~~~~~~~~~~~~--------~-----------l~~~g~~v~~~d-~~g~G~s~~-~~~~~~~~~ 75 (216)
+..+.++|.++.+.|..|++..|..+.+ . +-.. -.++.+| .-|.|.|.. ......+++
T Consensus 95 ~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~ 173 (498)
T COG2939 95 PNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFE 173 (498)
T ss_pred CCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchh
Confidence 3344568999999999998887755432 1 1111 3588899 778888874 212233444
Q ss_pred hHHHHHHHHHHH-------h--cCCCeEEEeeChhHHHHHHHHHhCcc---ccceEEEEccccccCC
Q 027952 76 SKREHFYQLWKT-------Y--IKRPMILVGPSLGAAVAVDFAVNHPE---AVENLVFIDASVYAEG 130 (216)
Q Consensus 76 ~~~~~~~~~~~~-------~--~~~~~~l~G~S~Gg~~a~~~a~~~~~---~~~~lvli~~~~~~~~ 130 (216)
...+|+..+.+. + ..++.+|+|.|.||.-+..+|..-.+ ..+++|++++.....+
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 444444444433 3 23489999999999988888875333 4678888888665444
No 186
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.85 E-value=0.025 Score=46.44 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=32.7
Q ss_pred CeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 92 PMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|++++|+|.||.+|..+|.--|..++++|=.++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999988887664
No 187
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.82 E-value=0.0053 Score=44.87 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 74 VTSKREHFYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
-++-+..|..|++.+ ...++.++|||+|..++-..+.+.+-.++.+|++++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 455666777777766 345799999999999999998886777999999999875
No 188
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.79 E-value=0.0059 Score=47.86 Aligned_cols=37 Identities=27% Similarity=0.441 Sum_probs=33.5
Q ss_pred CCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 91 RPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
...+|.|.|+||.+++..+.++|+++..++.-||...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 4589999999999999999999999999999888663
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.75 E-value=0.0028 Score=48.37 Aligned_cols=24 Identities=33% Similarity=0.427 Sum_probs=20.8
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
+..++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999999988853
No 190
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.72 E-value=0.00099 Score=56.58 Aligned_cols=122 Identities=14% Similarity=-0.000 Sum_probs=84.9
Q ss_pred CCCCcceEEEeeeccCC--CCCCCcEEEEcCCCCCc----chHHhhhhHHHhCCCeEEEEcCCCCCCCCCC-------CC
Q 027952 3 VNFSESCIMSSVVKPLK--PSKTSPVVLLHGFDSSC----LEWRCTYPLLEEAGLETWAVDILGWGFSDLE-------RL 69 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~--~~~~~~lv~~hG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-------~~ 69 (216)
+..+|.+|.+-.+. +. ..+.|++|+ |+||-. ..+.+.....-++|...+..+.||=|+=-+. ..
T Consensus 400 tSkDGT~IPYFiv~-K~~~~d~~pTll~--aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 400 TSKDGTRIPYFIVR-KGAKKDENPTLLY--AYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred EcCCCccccEEEEe-cCCcCCCCceEEE--eccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhc
Confidence 45688888888886 22 224566554 444322 2344444666677889999999996543211 02
Q ss_pred CCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 70 PPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
....++|+....++++++- ..+++.+.|-|-||.+......++|+.+.++|.--|...
T Consensus 477 rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 3456777777777777775 456799999999999999999999998888877666543
No 191
>PLN02209 serine carboxypeptidase
Probab=96.65 E-value=0.027 Score=47.34 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=68.9
Q ss_pred ceEEEeeeccCC-CCCCCcEEEEcCCCCCcchHHhhhh-----------------------HHHhCCCeEEEEc-CCCCC
Q 027952 8 SCIMSSVVKPLK-PSKTSPVVLLHGFDSSCLEWRCTYP-----------------------LLEEAGLETWAVD-ILGWG 62 (216)
Q Consensus 8 ~~i~~~~~~~~~-~~~~~~lv~~hG~~~~~~~~~~~~~-----------------------~l~~~g~~v~~~d-~~g~G 62 (216)
..+++-+..... ..+.|.++.+.|..|.+..+..+.+ ...+. ..++.+| ..|.|
T Consensus 52 ~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtG 130 (437)
T PLN02209 52 VQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPVGSG 130 (437)
T ss_pred eEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCCCCC
Confidence 345554444332 3457889999998877655422111 11222 6788999 67788
Q ss_pred CCCCCCC-CCCChhhHHHHHHHHHHH----h---cCCCeEEEeeChhHHHHHHHHHh----C------ccccceEEEEcc
Q 027952 63 FSDLERL-PPCNVTSKREHFYQLWKT----Y---IKRPMILVGPSLGAAVAVDFAVN----H------PEAVENLVFIDA 124 (216)
Q Consensus 63 ~s~~~~~-~~~~~~~~~~~~~~~~~~----~---~~~~~~l~G~S~Gg~~a~~~a~~----~------~~~~~~lvli~~ 124 (216)
.|..... ...+-++.++++.++++. . ...+++|.|.|.||.-+..+|.. . +-.++++++.++
T Consensus 131 fSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng 210 (437)
T PLN02209 131 FSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNP 210 (437)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCc
Confidence 8854321 111222334555554444 3 33589999999999866666653 2 123678888777
Q ss_pred cc
Q 027952 125 SV 126 (216)
Q Consensus 125 ~~ 126 (216)
..
T Consensus 211 ~t 212 (437)
T PLN02209 211 IT 212 (437)
T ss_pred cc
Confidence 44
No 192
>PLN02162 triacylglycerol lipase
Probab=96.57 E-value=0.0072 Score=50.36 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+..+.+.+++.+.+..++++.|||+||.+|+.+|+
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34445555555556668999999999999999866
No 193
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.52 E-value=0.0046 Score=51.27 Aligned_cols=83 Identities=17% Similarity=0.082 Sum_probs=55.4
Q ss_pred hHHhhhhHHHhCCCe------EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeEEEeeChhHHHHHH
Q 027952 38 EWRCTYPLLEEAGLE------TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMILVGPSLGAAVAVD 107 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~------v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~ 107 (216)
.|..+.+.|...||. -..+|+|= |.. .....+++...+...++.. +.++++|++||||+.+..+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~---~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SYH---NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---ccC---ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 578899999988887 33455552 111 1123344444444444443 5589999999999999999
Q ss_pred HHHhCcc--------ccceEEEEcccc
Q 027952 108 FAVNHPE--------AVENLVFIDASV 126 (216)
Q Consensus 108 ~a~~~~~--------~~~~lvli~~~~ 126 (216)
+...+++ .+++.|-++++.
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchh
Confidence 9998876 356777776654
No 194
>PLN00413 triacylglycerol lipase
Probab=96.47 E-value=0.0093 Score=49.83 Aligned_cols=35 Identities=29% Similarity=0.460 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+..+.+.++++..+..++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45566677777666778999999999999999985
No 195
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.46 E-value=0.018 Score=53.08 Aligned_cols=95 Identities=21% Similarity=0.326 Sum_probs=69.1
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCC-CCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEee
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGF-SDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGP 98 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~-s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~ 98 (216)
...|+++|+|...|..-..+.++..|. .|-+|. +... -+..++++.+.....-+++. +..+..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC----------Ccchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 457999999999888776666655542 222332 1222 24568999999888888888 6679999999
Q ss_pred ChhHHHHHHHHHhC--ccccceEEEEcccc
Q 027952 99 SLGAAVAVDFAVNH--PEAVENLVFIDASV 126 (216)
Q Consensus 99 S~Gg~~a~~~a~~~--~~~~~~lvli~~~~ 126 (216)
|.|+.++...|... .+....+|+.+.++
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 99999999998753 33456688888765
No 196
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.41 E-value=0.038 Score=47.83 Aligned_cols=123 Identities=13% Similarity=0.008 Sum_probs=83.6
Q ss_pred CcceEEEeeeccC---CCCCCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCCCCC-------CCCCCC
Q 027952 6 SESCIMSSVVKPL---KPSKTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFSDLE-------RLPPCN 73 (216)
Q Consensus 6 ~~~~i~~~~~~~~---~~~~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-------~~~~~~ 73 (216)
+|-.|.-+.+... .++..|.+++-=|.-|... .+....-.|-++|+-.-....||=|+=... .....+
T Consensus 428 dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NT 507 (682)
T COG1770 428 DGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNT 507 (682)
T ss_pred CCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhcccc
Confidence 3444444444432 2345566666555434332 244445567788888778888885532211 033457
Q ss_pred hhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccccc
Q 027952 74 VTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~~ 128 (216)
+.|+......+++.- ..+.+.+.|-|.||++....+...|+.+.++|+--|.+..
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 888888888888776 4557999999999999999999999999999998887643
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.41 E-value=0.011 Score=43.39 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=54.9
Q ss_pred EEEEcCCCCCcch---HHhhhhHHHhC-C---CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh----cCCCeE
Q 027952 26 VVLLHGFDSSCLE---WRCTYPLLEEA-G---LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY----IKRPMI 94 (216)
Q Consensus 26 lv~~hG~~~~~~~---~~~~~~~l~~~-g---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 94 (216)
||+..|.++.... -..+.+.+.+. | ..+..+++|-..... ....+..+-+..+.+.++.. +..+++
T Consensus 8 vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~kiv 84 (179)
T PF01083_consen 8 VIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKIV 84 (179)
T ss_dssp EEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEEE
T ss_pred EEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 4555666554332 12233444332 2 445556666432110 01123444455555555544 667899
Q ss_pred EEeeChhHHHHHHHHHh------CccccceEEEEccccccC
Q 027952 95 LVGPSLGAAVAVDFAVN------HPEAVENLVFIDASVYAE 129 (216)
Q Consensus 95 l~G~S~Gg~~a~~~a~~------~~~~~~~lvli~~~~~~~ 129 (216)
|+|+|.|+.++..++.. ..++|.++|+++-+....
T Consensus 85 l~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 85 LAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp EEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBT
T ss_pred EEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccC
Confidence 99999999999999887 235789999999877543
No 198
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.41 E-value=0.039 Score=46.33 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=69.2
Q ss_pred ceEEEeeeccC-CCCCCCcEEEEcCCCCCcchHH------hhh----------hHH-------HhCCCeEEEEc-CCCCC
Q 027952 8 SCIMSSVVKPL-KPSKTSPVVLLHGFDSSCLEWR------CTY----------PLL-------EEAGLETWAVD-ILGWG 62 (216)
Q Consensus 8 ~~i~~~~~~~~-~~~~~~~lv~~hG~~~~~~~~~------~~~----------~~l-------~~~g~~v~~~d-~~g~G 62 (216)
..+++-+.... .+.+.|.|+.+.|..|.+..+. ++. ..| .+. .+++.+| ..|.|
T Consensus 50 ~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtG 128 (433)
T PLN03016 50 VQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQPVGSG 128 (433)
T ss_pred eEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCCCCCC
Confidence 34455444432 2345789999999877665321 111 011 222 6789999 77888
Q ss_pred CCCCCCCCCC--Ch---hhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHh----C------ccccceEEEEcc
Q 027952 63 FSDLERLPPC--NV---TSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVN----H------PEAVENLVFIDA 124 (216)
Q Consensus 63 ~s~~~~~~~~--~~---~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~----~------~~~~~~lvli~~ 124 (216)
.|.......+ +. +++.+.+..+++.. ...+++|.|.|.||..+..+|.. . +-.++++++.++
T Consensus 129 fSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 129 FSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 8864321111 12 23444455554443 34689999999999876666653 2 124678888776
Q ss_pred cc
Q 027952 125 SV 126 (216)
Q Consensus 125 ~~ 126 (216)
..
T Consensus 209 ~t 210 (433)
T PLN03016 209 VT 210 (433)
T ss_pred Cc
Confidence 44
No 199
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.22 E-value=0.0066 Score=36.34 Aligned_cols=37 Identities=30% Similarity=0.480 Sum_probs=20.4
Q ss_pred CCCCcceEEEeeeccCCC------CCCCcEEEEcCCCCCcchH
Q 027952 3 VNFSESCIMSSVVKPLKP------SKTSPVVLLHGFDSSCLEW 39 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~------~~~~~lv~~hG~~~~~~~~ 39 (216)
|.++++-+..-+-.|... ..+|+|++.||+.+++..|
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 345666666666655333 4679999999999999988
No 200
>PLN02454 triacylglycerol lipase
Probab=96.14 E-value=0.01 Score=48.87 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCCC--eEEEeeChhHHHHHHHHHh
Q 027952 80 HFYQLWKTYIKRP--MILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 80 ~~~~~~~~~~~~~--~~l~G~S~Gg~~a~~~a~~ 111 (216)
.+..+++.....+ +++.|||+||.+|+..|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444444443333 9999999999999999864
No 201
>PLN02571 triacylglycerol lipase
Probab=96.08 E-value=0.01 Score=48.91 Aligned_cols=37 Identities=30% Similarity=0.342 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhcCC--CeEEEeeChhHHHHHHHHHh
Q 027952 75 TSKREHFYQLWKTYIKR--PMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 75 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 111 (216)
++..+++..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44556666666665332 68999999999999999875
No 202
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.95 E-value=0.043 Score=47.49 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=70.9
Q ss_pred CCcceEEEeeeccCCCCC--CCcEEEEcCCC---CCcchHHh--hhhHHHhCCCeEEEEcCC----CCCCCCCCC-CCCC
Q 027952 5 FSESCIMSSVVKPLKPSK--TSPVVLLHGFD---SSCLEWRC--TYPLLEEAGLETWAVDIL----GWGFSDLER-LPPC 72 (216)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~--~~~lv~~hG~~---~~~~~~~~--~~~~l~~~g~~v~~~d~~----g~G~s~~~~-~~~~ 72 (216)
.+...++.-.+.|..... -|++|++||.+ ++...+.. ....+.....-|+.+.+| |+....... ...+
T Consensus 92 ~sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~ 171 (545)
T KOG1516|consen 92 GSEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNL 171 (545)
T ss_pred CcCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcc
Confidence 456667777777754443 69999999976 33222211 112222222445555544 222221110 2344
Q ss_pred ChhhHHHHH---HHHHHHh--cCCCeEEEeeChhHHHHHHHHHhC--ccccceEEEEcccccc
Q 027952 73 NVTSKREHF---YQLWKTY--IKRPMILVGPSLGAAVAVDFAVNH--PEAVENLVFIDASVYA 128 (216)
Q Consensus 73 ~~~~~~~~~---~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~--~~~~~~lvli~~~~~~ 128 (216)
.+.|+...+ .+-+... +..+++|.|||.||..+-.++... ...+.++|..+.+...
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 555555544 4444444 556899999999999887776632 3557777887776643
No 203
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.94 E-value=0.026 Score=45.71 Aligned_cols=49 Identities=35% Similarity=0.388 Sum_probs=35.0
Q ss_pred HHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCcc-----ccceEEEEcccccc
Q 027952 80 HFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPE-----AVENLVFIDASVYA 128 (216)
Q Consensus 80 ~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~~~~lvli~~~~~~ 128 (216)
.+.+.+... +.+|++|+|||+|+.+...+...-.+ .|+.+++++++...
T Consensus 207 ~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 207 VLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred HHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 334444333 55689999999999988887765333 37999999987743
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.89 E-value=0.02 Score=42.82 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=45.1
Q ss_pred hHHHhCCCeEEEEcCCCCCCCCCC-C-------CCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 44 PLLEEAGLETWAVDILGWGFSDLE-R-------LPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 44 ~~l~~~g~~v~~~d~~g~G~s~~~-~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
..|.+. .+|++|-+|-....... . .......|.......++++. +.++++|+|||.|+.+..++..++
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 355555 78888888864221111 0 11123455556666677777 556999999999999999998864
No 205
>PLN02408 phospholipase A1
Probab=95.79 E-value=0.017 Score=46.92 Aligned_cols=36 Identities=33% Similarity=0.423 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCC--CeEEEeeChhHHHHHHHHHhC
Q 027952 77 KREHFYQLWKTYIKR--PMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 77 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
..+.+..+++..... .+++.|||+||.+|+.+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345555666655433 599999999999999998853
No 206
>PLN02934 triacylglycerol lipase
Probab=95.64 E-value=0.021 Score=48.20 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+....+.+++++.+..++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45556666666666778999999999999999985
No 207
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.44 E-value=0.084 Score=39.79 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=54.1
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeE-EEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLET-WAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v-~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
++..||+..|+|++.....++.. . .++++ +++|+|.. ..+. + + ...+.++|+|+||
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~--~-~~~D~l~~yDYr~l---------~~d~-----~---~---~~y~~i~lvAWSm 66 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL--P-ENYDVLICYDYRDL---------DFDF-----D---L---SGYREIYLVAWSM 66 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC--C-CCccEEEEecCccc---------cccc-----c---c---ccCceEEEEEEeH
Confidence 45789999999999887765532 1 23554 45676532 1111 1 1 1467899999999
Q ss_pred hHHHHHHHHHhCccccceEEEEccccc
Q 027952 101 GAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
|=..|.++....| ++..|.|+.++.
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCC
Confidence 9999988866554 667777777654
No 208
>PLN02324 triacylglycerol lipase
Probab=95.37 E-value=0.03 Score=46.22 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhcC--CCeEEEeeChhHHHHHHHHHh
Q 027952 77 KREHFYQLWKTYIK--RPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 77 ~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
..+.+..+++.... -.+++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455556665543 259999999999999999864
No 209
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.28 E-value=0.023 Score=46.34 Aligned_cols=89 Identities=18% Similarity=0.112 Sum_probs=51.0
Q ss_pred CCCCcEEEEcCCCC-CcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 21 SKTSPVVLLHGFDS-SCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 21 ~~~~~lv~~hG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
..+..+++.||+.+ +...|........+. +.=.....+|+-..--.+ .-..=-+..++++.+.+......++..+|
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 34467899999998 566787777776665 333244444432111111 11111233444444444444467899999
Q ss_pred eChhHHHHHHHHH
Q 027952 98 PSLGAAVAVDFAV 110 (216)
Q Consensus 98 ~S~Gg~~a~~~a~ 110 (216)
||+||.++..+-.
T Consensus 157 hSLGGLvar~AIg 169 (405)
T KOG4372|consen 157 HSLGGLVARYAIG 169 (405)
T ss_pred eecCCeeeeEEEE
Confidence 9999997655433
No 210
>PLN02310 triacylglycerol lipase
Probab=95.23 E-value=0.062 Score=44.36 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHhc----CCCeEEEeeChhHHHHHHHHHh
Q 027952 76 SKREHFYQLWKTYI----KRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 76 ~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
+..+.+.++++.+. ..++++.|||+||.+|+..|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455566665542 2369999999999999998864
No 211
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.03 E-value=0.32 Score=41.46 Aligned_cols=114 Identities=17% Similarity=0.016 Sum_probs=72.0
Q ss_pred eEEEeeeccCCCCCCCcEEEEcCCCCCcchH--Hh----hhhHHHhCCCeEEEEcCCCCCCCCC--CCCCCCChhh----
Q 027952 9 CIMSSVVKPLKPSKTSPVVLLHGFDSSCLEW--RC----TYPLLEEAGLETWAVDILGWGFSDL--ERLPPCNVTS---- 76 (216)
Q Consensus 9 ~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~--~~----~~~~l~~~g~~v~~~d~~g~G~s~~--~~~~~~~~~~---- 76 (216)
.|..+.+.|...+++ ++.-|.+|..... .. +...+ .+||.++.=|- ||..+.. ......+.+.
T Consensus 16 ~i~fev~LP~~WNgR---~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 16 NIRFEVWLPDNWNGR---FLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred eEEEEEECChhhccC---eEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHH
Confidence 788888888754443 2223334333322 11 23344 45799999886 7765543 1111133322
Q ss_pred -------HHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 77 -------KREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 77 -------~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
.+..-.++++++ ..++-+..|-|.||.-++..|.+||+.++++|.-+|...
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 222333444454 556789999999999999999999999999999888663
No 212
>PLN02802 triacylglycerol lipase
Probab=94.99 E-value=0.042 Score=46.41 Aligned_cols=36 Identities=28% Similarity=0.281 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcC--CCeEEEeeChhHHHHHHHHHhC
Q 027952 77 KREHFYQLWKTYIK--RPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 77 ~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
..+.+.++++.... -.+++.|||+||.+|+..|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455556655532 2689999999999999988753
No 213
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.83 E-value=0.22 Score=41.99 Aligned_cols=123 Identities=14% Similarity=0.125 Sum_probs=70.0
Q ss_pred CCCCC-cceEEEeeeccCC-CCCCCcEEEEcCCCCCcchHHhhhhH------------H-------HhCCCeEEEEcCC-
Q 027952 2 QVNFS-ESCIMSSVVKPLK-PSKTSPVVLLHGFDSSCLEWRCTYPL------------L-------EEAGLETWAVDIL- 59 (216)
Q Consensus 2 ~~~~~-~~~i~~~~~~~~~-~~~~~~lv~~hG~~~~~~~~~~~~~~------------l-------~~~g~~v~~~d~~- 59 (216)
+++.+ +..+++-+..... +...|.||.+-|..|.+..- .++.+ | .+. -.++-+|.|
T Consensus 50 ~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfLd~Pv 127 (454)
T KOG1282|consen 50 TVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFLDQPV 127 (454)
T ss_pred ECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEEecCC
Confidence 34443 4445555555433 34578899999998776533 22211 1 111 357777766
Q ss_pred CCCCCCCCCCCC--CCh----hhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHh----Cc------cccceEE
Q 027952 60 GWGFSDLERLPP--CNV----TSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVN----HP------EAVENLV 120 (216)
Q Consensus 60 g~G~s~~~~~~~--~~~----~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~----~~------~~~~~lv 120 (216)
|.|.|...+... .+- ++..+.+.+++++. ...+++|.|.|.+|.....+|.. +. -.+++++
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 567665433111 223 34444555555544 44689999999999766666653 21 2467887
Q ss_pred EEcccc
Q 027952 121 FIDASV 126 (216)
Q Consensus 121 li~~~~ 126 (216)
+-.+..
T Consensus 208 IGNg~t 213 (454)
T KOG1282|consen 208 IGNGLT 213 (454)
T ss_pred ecCccc
Confidence 766654
No 214
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.83 E-value=0.07 Score=38.55 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=60.4
Q ss_pred CCCcEEEEcCCCCCcchHHh------hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHH----HHHHHHHHhcCC
Q 027952 22 KTSPVVLLHGFDSSCLEWRC------TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKRE----HFYQLWKTYIKR 91 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~------~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 91 (216)
.+.+||+.+-.+|...++.. +++.+.+--.+.++++-... +|-.. ...+..+.++ .-..+++.....
T Consensus 25 aG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~glds-ESf~a--~h~~~adr~~rH~AyerYv~eEalpg 101 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGLDS-ESFLA--THKNAADRAERHRAYERYVIEEALPG 101 (227)
T ss_pred CCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecccch-HhHhh--hcCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 45677777777776665543 33333332245555553210 11111 1122222222 222334444445
Q ss_pred CeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 92 PMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
...+-|-||||..|..+..++|+.++++|..+...
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 57889999999999999999999999999998754
No 215
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.71 E-value=0.1 Score=42.98 Aligned_cols=104 Identities=18% Similarity=0.133 Sum_probs=78.4
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHh---cCCCeEE
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTY---IKRPMIL 95 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~l 95 (216)
-.+|+|+..-|++-...-.+.=...|-+ -+-+.+++|-|+.|.+.. ....++++.+.|.+.+++.+ -..+.+=
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 3568888888988654333221223322 367888999999997653 45568889999999888887 3467899
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
-|.|-||+.++.+=.-||+-|++.|.--++.
T Consensus 139 TG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred cCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 9999999999998888999999998876664
No 216
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.71 E-value=0.15 Score=41.14 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=46.8
Q ss_pred CeEEEEcCC-CCCCCCCCCCCCCC-----hhhHHHHHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHh----C-----
Q 027952 51 LETWAVDIL-GWGFSDLERLPPCN-----VTSKREHFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVN----H----- 112 (216)
Q Consensus 51 ~~v~~~d~~-g~G~s~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~----~----- 112 (216)
..++-+|.| |.|.|.......+. .++....+.++++.. ...+++|.|.|.||..+..+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368889988 88888643211111 133334444444433 45689999999999877777663 1
Q ss_pred -ccccceEEEEcccc
Q 027952 113 -PEAVENLVFIDASV 126 (216)
Q Consensus 113 -~~~~~~lvli~~~~ 126 (216)
+-.++++++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 11467888777644
No 217
>PLN02753 triacylglycerol lipase
Probab=94.58 E-value=0.06 Score=45.68 Aligned_cols=35 Identities=23% Similarity=0.182 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhc-----CCCeEEEeeChhHHHHHHHHHh
Q 027952 77 KREHFYQLWKTYI-----KRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 77 ~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
..+.+..+++... .-++++.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4445555655542 2479999999999999999863
No 218
>PLN02719 triacylglycerol lipase
Probab=94.54 E-value=0.062 Score=45.47 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcC-----CCeEEEeeChhHHHHHHHHHh
Q 027952 77 KREHFYQLWKTYIK-----RPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 77 ~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
....+.++++.+.. .++++.|||+||.+|+..|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34445555555432 369999999999999998864
No 219
>PLN02761 lipase class 3 family protein
Probab=94.52 E-value=0.064 Score=45.47 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHhc------CCCeEEEeeChhHHHHHHHHHh
Q 027952 76 SKREHFYQLWKTYI------KRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 76 ~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
+..+.+..+++... .-++++.|||+||.+|+..|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34445555555542 2369999999999999998863
No 220
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.38 E-value=0.071 Score=45.22 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhc----CCCeEEEeeChhHHHHHHHHHh
Q 027952 77 KREHFYQLWKTYI----KRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 77 ~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
..+++.++++.+. ..++++.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4455666666552 2369999999999999998864
No 221
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.33 E-value=0.23 Score=41.83 Aligned_cols=115 Identities=12% Similarity=-0.047 Sum_probs=69.3
Q ss_pred CcceEEEeeeccCCCCCCCcEEEEcCCCCCcch-HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHH
Q 027952 6 SESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLE-WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQL 84 (216)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 84 (216)
.+.++.+.+. | ++-++|..|+..|+...-.+ --.+.+.|... ..+.-|.|=-|.+--.....| -+...+.+.+.
T Consensus 274 ~reEi~yYFn-P-GD~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~ 348 (511)
T TIGR03712 274 KRQEFIYYFN-P-GDFKPPLNVYFSGYRPAEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEK 348 (511)
T ss_pred CCCeeEEecC-C-cCCCCCeEEeeccCcccCcchhHHHHHhcCCC--eEEeeccccccceeeeCcHHH-HHHHHHHHHHH
Confidence 3444444443 2 34456677999998863321 12345566543 456667776665532211112 23355566666
Q ss_pred HHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEccccc
Q 027952 85 WKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 85 ~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
++.+ ..+.++|-|.|||..=|++|+++.. -.++|+--|...
T Consensus 349 L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 349 LDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 6777 4557999999999999999999864 245666555444
No 222
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.32 E-value=0.4 Score=41.36 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=62.3
Q ss_pred CCCCCCcEEEEcCCC---CCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHH---h--c
Q 027952 19 KPSKTSPVVLLHGFD---SSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT---Y--I 89 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~---~--~ 89 (216)
.+..+-.|+=+||.| .++.......+.+++. |+.|+.+|+.=--+.+ ...-.++..-....++.. + .
T Consensus 392 ~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP----FPRaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 392 APRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP----FPRALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred CCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC----CCcHHHHHHHHHHHHhcCHHHhCcc
Confidence 344556788889987 3444444444444433 7899999974322221 223344433333333322 3 4
Q ss_pred CCCeEEEeeChhHHHHHHHHHh----CccccceEEEEcccccc
Q 027952 90 KRPMILVGPSLGAAVAVDFAVN----HPEAVENLVFIDASVYA 128 (216)
Q Consensus 90 ~~~~~l~G~S~Gg~~a~~~a~~----~~~~~~~lvli~~~~~~ 128 (216)
.++++++|-|.||++.+-.|.+ .-..-+++++.-++...
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 5689999999999977666554 22223689998776643
No 223
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=94.21 E-value=0.76 Score=36.34 Aligned_cols=103 Identities=9% Similarity=0.076 Sum_probs=77.1
Q ss_pred CCCcEEEEcCCCCCcch-HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh
Q 027952 22 KTSPVVLLHGFDSSCLE-WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL 100 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 100 (216)
..|.|+++-.+.|+... .+..++.|-.. ..|+.-|+----..+.. ....+++++.+.+.+++..++.+ .++++.|.
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~-~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLE-AGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecc-cCCccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 34677777788777654 57788888777 88999998755444333 35679999999999999998766 78888887
Q ss_pred hH-----HHHHHHHHhCccccceEEEEccccc
Q 027952 101 GA-----AVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg-----~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
=+ .+++..+...|..-++.++++++..
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 64 4555555567777899999998774
No 224
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.80 E-value=0.36 Score=36.82 Aligned_cols=77 Identities=18% Similarity=0.114 Sum_probs=49.7
Q ss_pred CCeEEEEcCCCC-CCC-CCC-CCCCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCcc------ccce
Q 027952 50 GLETWAVDILGW-GFS-DLE-RLPPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPE------AVEN 118 (216)
Q Consensus 50 g~~v~~~d~~g~-G~s-~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~------~~~~ 118 (216)
|+.+..+++|.. +.- ... .....+..+-++.+.+.++.. ..++++++|+|+|+.++...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777777762 111 011 124456777777777777764 45789999999999999998876421 1235
Q ss_pred EEEEcccc
Q 027952 119 LVFIDASV 126 (216)
Q Consensus 119 lvli~~~~ 126 (216)
.|+++-+.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 66666543
No 225
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.61 E-value=0.12 Score=41.91 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHh
Q 027952 75 TSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
+.+.+.+..+++....-.+.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566677777777777789999999999999998874
No 226
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=93.47 E-value=0.09 Score=35.41 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=22.5
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEcCCCCCcchHHhh
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLHGFDSSCLEWRCT 42 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~hG~~~~~~~~~~~ 42 (216)
++.++-.|.....+. ...+..||||+||+.|+..++.++
T Consensus 73 t~I~g~~iHFih~rs-~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 73 TEIDGLDIHFIHVRS-KRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEETTEEEEEEEE---S-TT-EEEEEE--SS--GGGGHHH
T ss_pred EEEeeEEEEEEEeeC-CCCCCeEEEEECCCCccHHhHHhh
Confidence 345577777777776 445668999999999998776553
No 227
>PLN02847 triacylglycerol lipase
Probab=93.34 E-value=0.15 Score=43.95 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=19.5
Q ss_pred cCCCeEEEeeChhHHHHHHHHHh
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 34479999999999999998874
No 228
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=92.67 E-value=1.9 Score=28.38 Aligned_cols=84 Identities=15% Similarity=0.223 Sum_probs=56.5
Q ss_pred hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHH--HHHHHHHhCccc
Q 027952 38 EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAA--VAVDFAVNHPEA 115 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~--~a~~~a~~~~~~ 115 (216)
.+..+.+.+..+|+..=.+.++..|.+..........+.-...+..+++..+..+++++|-|--.- +-...|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 345566677777787666777777655432211122245666788888888889999999997754 444556789999
Q ss_pred cceEEE
Q 027952 116 VENLVF 121 (216)
Q Consensus 116 ~~~lvl 121 (216)
|.++-+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 887754
No 229
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.15 E-value=0.46 Score=36.98 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=60.0
Q ss_pred CcEEEEcCCCCCcchHH-hhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHH--------HHHHHHH------h
Q 027952 24 SPVVLLHGFDSSCLEWR-CTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREH--------FYQLWKT------Y 88 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~--------~~~~~~~------~ 88 (216)
+..+.+-|.+.+...-+ .+...+.++|...+.+.-|-+|....+. ...+.-+++.| ++++... .
T Consensus 114 ~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~-q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~ 192 (371)
T KOG1551|consen 114 DLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEE-QIIHMLEYVTDLFKMGRATIQEFVKLFTWSSAD 192 (371)
T ss_pred CeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHH-HHHHHHHHHHHHHHhhHHHHHHHHHhccccccc
Confidence 44555555555554433 4667888888999999999888654331 11111111111 1222221 2
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~ 123 (216)
+..++.|+|.||||.+|......++.-|+-+=..+
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~ 227 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLN 227 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCcccccccc
Confidence 55689999999999999999998776554443333
No 230
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.73 E-value=0.43 Score=37.52 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
+-.+.+..+..++.+-|||+||.+|..+..++. +-.+...+|
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 333444447778999999999999999988875 333444333
No 231
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.73 E-value=0.43 Score=37.52 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
+-.+.+..+..++.+-|||+||.+|..+..++. +-.+...+|
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 333444447778999999999999999988875 333444333
No 232
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.43 E-value=0.31 Score=42.10 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=61.9
Q ss_pred CCcEEEEcCCC--CC-cchHHhhhhHHHhCC--CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHH--------hc
Q 027952 23 TSPVVLLHGFD--SS-CLEWRCTYPLLEEAG--LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT--------YI 89 (216)
Q Consensus 23 ~~~lv~~hG~~--~~-~~~~~~~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~--------~~ 89 (216)
.|.++++||.. .. .+.+..+-..|...| -.+-.+|++.- ....++...++.+..+.+. +.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~-------igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP-------IGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC-------CCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 47789999987 11 222223444444443 44556666531 1224566666666666552 25
Q ss_pred CCCeEEEeeChhHHHHHHHHHhCc-cccceEEEEcccc
Q 027952 90 KRPMILVGPSLGAAVAVDFAVNHP-EAVENLVFIDASV 126 (216)
Q Consensus 90 ~~~~~l~G~S~Gg~~a~~~a~~~~-~~~~~lvli~~~~ 126 (216)
..+++|+|.|||+.++.+.+.... ..|+++|-|+-+.
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl 286 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPL 286 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccc
Confidence 568999999999999998887554 3588899888654
No 233
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=89.30 E-value=2.6 Score=31.60 Aligned_cols=72 Identities=13% Similarity=0.009 Sum_probs=50.6
Q ss_pred hhhHHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh----hHHHHHHHHHhCc-cc
Q 027952 42 TYPLLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL----GAAVAVDFAVNHP-EA 115 (216)
Q Consensus 42 ~~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~~~-~~ 115 (216)
..+.+...|. +|+..+.++. ..|+.+.++..+.+++++.+ ..++|+|+|. |..++.++|++.. ..
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~l 138 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQ 138 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCc
Confidence 3444555555 5666665432 45788999999999998876 4589999998 8899999999753 23
Q ss_pred cceEEEE
Q 027952 116 VENLVFI 122 (216)
Q Consensus 116 ~~~lvli 122 (216)
+..++-+
T Consensus 139 vsdv~~l 145 (202)
T cd01714 139 ITYVSKI 145 (202)
T ss_pred cceEEEE
Confidence 4444444
No 234
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.87 E-value=1.1 Score=38.04 Aligned_cols=41 Identities=34% Similarity=0.477 Sum_probs=32.2
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC-----ccccceEEEEccccccC
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH-----PEAVENLVFIDASVYAE 129 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~~lvli~~~~~~~ 129 (216)
+.+|+.|+|+|+|+.+-+.+...- -..|+.++|.++|....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 678999999999999988776531 23588999999887543
No 235
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=87.85 E-value=3.9 Score=32.90 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=66.3
Q ss_pred CCCCcEEEEcCCCCCcch----HHh---h--------hhHHHhCCCeEEEEcCC-CCCCCCCCC--CCCCChhhHHHHHH
Q 027952 21 SKTSPVVLLHGFDSSCLE----WRC---T--------YPLLEEAGLETWAVDIL-GWGFSDLER--LPPCNVTSKREHFY 82 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~----~~~---~--------~~~l~~~g~~v~~~d~~-g~G~s~~~~--~~~~~~~~~~~~~~ 82 (216)
-.+|..+.+.|..+.+.. ++. + ...|.+ ..++.+|-| |.|.|.... ....+.++.+.|+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 456777888887654431 221 1 124444 356666655 566665443 23346788899999
Q ss_pred HHHHHh-------cCCCeEEEeeChhHHHHHHHHHhCcc---------ccceEEEEcccc
Q 027952 83 QLWKTY-------IKRPMILVGPSLGAAVAVDFAVNHPE---------AVENLVFIDASV 126 (216)
Q Consensus 83 ~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~---------~~~~lvli~~~~ 126 (216)
.+++.+ ...|++|+..|.||-+|..++...-+ .+.+++|-++..
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 999887 34589999999999988877664322 245677766543
No 236
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=87.60 E-value=7.8 Score=29.61 Aligned_cols=99 Identities=14% Similarity=0.219 Sum_probs=59.7
Q ss_pred cEEEEcCCCCCcch-HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcC---CCeEEEeeCh
Q 027952 25 PVVLLHGFDSSCLE-WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIK---RPMILVGPSL 100 (216)
Q Consensus 25 ~lv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~G~S~ 100 (216)
|+|++-||.+.... .....+.-.+.|+.++.+-.+..... .........++.+.+.+..... .++.+=.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFF----WPSKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHe----eeccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 57888898876653 33444444457899998876532111 1113455556656666655522 2799999999
Q ss_pred hHHHHHHHHHh-----C--c---cccceEEEEccccc
Q 027952 101 GAAVAVDFAVN-----H--P---EAVENLVFIDASVY 127 (216)
Q Consensus 101 Gg~~a~~~a~~-----~--~---~~~~~lvli~~~~~ 127 (216)
||......... . . .+++++|+=|+++.
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 88776666441 1 1 23778887555543
No 237
>PRK12467 peptide synthase; Provisional
Probab=85.23 E-value=4.5 Score=43.72 Aligned_cols=98 Identities=15% Similarity=0.045 Sum_probs=70.4
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChh
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLG 101 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~G 101 (216)
.+.+++.|...++...+.++...+... ..++.+..++.-.-. ....++++.+....+.+... ...+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~---~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDG---WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCC-CcEEEEecccccccc---CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 356999999988888787888777654 788888776543221 13456777777777777666 4567999999999
Q ss_pred HHHHHHHHHh---CccccceEEEEcc
Q 027952 102 AAVAVDFAVN---HPEAVENLVFIDA 124 (216)
Q Consensus 102 g~~a~~~a~~---~~~~~~~lvli~~ 124 (216)
|.++...+.+ ..+.+.-+.+++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEec
Confidence 9999888774 3455665655543
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.66 E-value=2 Score=37.27 Aligned_cols=39 Identities=21% Similarity=0.560 Sum_probs=28.9
Q ss_pred cCCCeEEEeeChhHHHHHHHHHh-----Ccc------ccceEEEEccccc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVN-----HPE------AVENLVFIDASVY 127 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~-----~~~------~~~~lvli~~~~~ 127 (216)
+..++..+||||||.++=....+ .|+ ...++|.++.+..
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 36789999999999887666553 232 3578888888764
No 239
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=84.15 E-value=4.6 Score=34.44 Aligned_cols=124 Identities=13% Similarity=0.138 Sum_probs=66.2
Q ss_pred CCCCCcceEEEeeeccCCCC-CCCcEEEEcCCC---CCc--chHHhhhhHHHhCC-CeEEEEcCCC-------C-CCCCC
Q 027952 2 QVNFSESCIMSSVVKPLKPS-KTSPVVLLHGFD---SSC--LEWRCTYPLLEEAG-LETWAVDILG-------W-GFSDL 66 (216)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~-~~~~lv~~hG~~---~~~--~~~~~~~~~l~~~g-~~v~~~d~~g-------~-G~s~~ 66 (216)
+++.++..++.-.|.|..+. +..++|.+=|.| |+. +.|+ .+.|+..+ --|+.+++|- . |..+.
T Consensus 113 Nt~lSEDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~ea 190 (601)
T KOG4389|consen 113 NTELSEDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEA 190 (601)
T ss_pred CCCcChhceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCC
Confidence 46778888999999985333 344566676655 222 3344 23343332 2233333331 1 11222
Q ss_pred CC-CCCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHH-HHHHHH-hCccccceEEEEccccc
Q 027952 67 ER-LPPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAV-AVDFAV-NHPEAVENLVFIDASVY 127 (216)
Q Consensus 67 ~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~-a~~~a~-~~~~~~~~lvli~~~~~ 127 (216)
+. ....+..-...++.+-+... +.+++.|.|.|.|+.- .+++.+ .-...++..|+-+.+..
T Consensus 191 PGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 191 PGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 21 11223333445666666666 5678999999999753 333332 11234677777776653
No 240
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=84.04 E-value=5.6 Score=30.74 Aligned_cols=119 Identities=25% Similarity=0.203 Sum_probs=67.1
Q ss_pred ceEEEeeeccCCC---CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC---------CCCCChh
Q 027952 8 SCIMSSVVKPLKP---SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER---------LPPCNVT 75 (216)
Q Consensus 8 ~~i~~~~~~~~~~---~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---------~~~~~~~ 75 (216)
..+....+.|... +.-|.+++.||+++....-......+.+.++.+...+...+|.+.... .......
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 3455566666443 345789999999988876555788888887887777652222221110 0000000
Q ss_pred h---HHHHHH--H-HHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccceEEEEcccc
Q 027952 76 S---KREHFY--Q-LWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVENLVFIDASV 126 (216)
Q Consensus 76 ~---~~~~~~--~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~lvli~~~~ 126 (216)
. ....+. . ........+....|+++|+..+..++...+. ....+++++.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 169 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESL 169 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeecc
Confidence 0 000000 0 0111123678999999999999999887763 234555555443
No 241
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=83.99 E-value=12 Score=25.88 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=40.6
Q ss_pred CCCCCcEEEEcCCCCCcchH--HhhhhHHHhCCCe---EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh
Q 027952 20 PSKTSPVVLLHGFDSSCLEW--RCTYPLLEEAGLE---TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~--~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 88 (216)
..++|.|+-+||+.|....+ +-+++.|.+.|.. |..+...-|- +....++++-+.+.+.+...
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hF------P~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHF------PHNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccC------CCchHHHHHHHHHHHHHHHH
Confidence 35678888899999999876 4577888777633 3332222111 23346777777777777654
No 242
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=77.52 E-value=26 Score=25.87 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=40.4
Q ss_pred CCCCcEEEEcCCCCCcchH--HhhhhHHHhCCCeEEEEcCCC--CCCCCCCCCCCCChhhHHHHHH
Q 027952 21 SKTSPVVLLHGFDSSCLEW--RCTYPLLEEAGLETWAVDILG--WGFSDLERLPPCNVTSKREHFY 82 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g--~G~s~~~~~~~~~~~~~~~~~~ 82 (216)
+.++.+|.+-|+.|+...= ..+.+.|.+.|++++..|--. ||.+.. ..++-++-.+.+.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d---LgFs~edR~eniR 82 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD---LGFSREDRIENIR 82 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC---CCCChHHHHHHHH
Confidence 4567899999999888752 457789999999999999543 444432 2344444444433
No 243
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.19 E-value=9.6 Score=27.54 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=52.5
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCe-EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLE-TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
...||+.-|++.......++. +.+. +. ++.+|++... -..+++. .+.+.++++|||
T Consensus 11 d~LIvyFaGwgtpps~v~HLi--lpeN-~dl~lcYDY~dl~-------ldfDfsA-------------y~hirlvAwSMG 67 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNHLI--LPEN-HDLLLCYDYQDLN-------LDFDFSA-------------YRHIRLVAWSMG 67 (214)
T ss_pred CEEEEEEecCCCCHHHHhhcc--CCCC-CcEEEEeehhhcC-------cccchhh-------------hhhhhhhhhhHH
Confidence 347888889998887665443 2333 55 5677776431 1222221 345789999999
Q ss_pred HHHHHHHHHhCccccceEEEEccccc
Q 027952 102 AAVAVDFAVNHPEAVENLVFIDASVY 127 (216)
Q Consensus 102 g~~a~~~a~~~~~~~~~lvli~~~~~ 127 (216)
=.+|-++....+ +++.+.|.+.+.
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCC
Confidence 999999887665 667777777553
No 244
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=70.64 E-value=33 Score=25.48 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=47.3
Q ss_pred hhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccce
Q 027952 41 CTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVEN 118 (216)
Q Consensus 41 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~ 118 (216)
...+.+.+.+++++.+|-+|.. ..-.+..+.+.++++......++++=-+..+.-.+..+.++-+ .+++
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~---------~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~ 144 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRS---------PRDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDG 144 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSS---------STHHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCE
T ss_pred HHHHHHhhcCCCEEEEecCCcc---------hhhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCce
Confidence 3445566677999999999863 2235566777778777766666666666666666655554422 3788
Q ss_pred EEEE
Q 027952 119 LVFI 122 (216)
Q Consensus 119 lvli 122 (216)
+|+-
T Consensus 145 lIlT 148 (196)
T PF00448_consen 145 LILT 148 (196)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8874
No 245
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=67.21 E-value=13 Score=29.43 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=27.8
Q ss_pred CCCeEEEeeChhHHHHHHH---HHhCccccceEEEEcccccc
Q 027952 90 KRPMILVGPSLGAAVAVDF---AVNHPEAVENLVFIDASVYA 128 (216)
Q Consensus 90 ~~~~~l~G~S~Gg~~a~~~---a~~~~~~~~~lvli~~~~~~ 128 (216)
..++++.|.|+|+.-+... ....-+++++.+..+++...
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 4579999999997744433 22334569999999997643
No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=67.08 E-value=51 Score=27.36 Aligned_cols=87 Identities=23% Similarity=0.244 Sum_probs=59.6
Q ss_pred CCcEEEEcCCC-------CCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEE
Q 027952 23 TSPVVLLHGFD-------SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMIL 95 (216)
Q Consensus 23 ~~~lv~~hG~~-------~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (216)
...||++||-- .+.++|..+++.+.++| -+-.+|.--+|.. ..+++-+..+..+++... -.+
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~-------~GleeDa~~lR~~a~~~~---~~l 239 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFA-------DGLEEDAYALRLFAEVGP---ELL 239 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhc-------cchHHHHHHHHHHHHhCC---cEE
Confidence 45799999743 44568999999999984 3445565544422 235666666666665532 288
Q ss_pred EeeChhHHHHHHHHHhCccccceEEEEccc
Q 027952 96 VGPSLGAAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 96 ~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
+..|..-.+++ |.+||.++.+++..
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeCC
Confidence 88888777654 57889999999864
No 247
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=66.35 E-value=10 Score=27.76 Aligned_cols=27 Identities=22% Similarity=0.071 Sum_probs=21.7
Q ss_pred HhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 87 TYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 87 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
..+...-.++|-|.|+.++..++..++
T Consensus 23 e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 23 EAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 334555799999999999999998653
No 248
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=66.29 E-value=11 Score=27.11 Aligned_cols=34 Identities=26% Similarity=0.115 Sum_probs=25.3
Q ss_pred HHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 79 EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
..+..+.++ +...-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444443 5557899999999999999999754
No 249
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=66.27 E-value=10 Score=30.46 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=39.0
Q ss_pred chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 37 LEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 37 ~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
..|+++++.|... -.-++++ | |.. ---..+..+..+ +..+...-.++|-|+|+.++..||..+
T Consensus 2 ~d~~rl~r~l~~~-~~gLvL~--G-GG~--------RG~ahiGvL~aL-ee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGN-SIALVLG--G-GGA--------RGCAHIGVIKAL-EEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCC-CEEEEEC--C-hHH--------HHHHHHHHHHHH-HHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 3577788888765 3333443 1 111 112233344444 444666779999999999999999874
No 250
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=65.25 E-value=44 Score=28.27 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=50.7
Q ss_pred hHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccc--cceEEE
Q 027952 44 PLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEA--VENLVF 121 (216)
Q Consensus 44 ~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~--~~~lvl 121 (216)
+.+.+.+|+|+.+|-.|. ..-=+++.+.+.++-+...+..+.+|--+|-|.-|...|..+.+. +.++|+
T Consensus 176 ~~ak~~~~DvvIvDTAGR---------l~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGR---------LHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHHcCCCEEEEeCCCc---------ccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 455555677777776653 112345666777777777888899999999999999999887654 678887
Q ss_pred E
Q 027952 122 I 122 (216)
Q Consensus 122 i 122 (216)
.
T Consensus 247 T 247 (451)
T COG0541 247 T 247 (451)
T ss_pred E
Confidence 5
No 251
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=63.81 E-value=34 Score=28.35 Aligned_cols=44 Identities=16% Similarity=0.030 Sum_probs=31.2
Q ss_pred HHHHHHHHh---cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 80 HFYQLWKTY---IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 80 ~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
.+++++++. ..+++++.|.|-=|..+...|+ ..+||.++|-+.-
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vi 204 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVI 204 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEE
Confidence 334444444 5678999999999999888888 4466776665543
No 252
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.70 E-value=49 Score=27.18 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=65.6
Q ss_pred CCCcEEEEcCCCCCcchHHh-hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc--CCCeEEEee
Q 027952 22 KTSPVVLLHGFDSSCLEWRC-TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI--KRPMILVGP 98 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~G~ 98 (216)
...+||++=||.|..+.|.. ......+.|+.++.+-.|-+-..........+.....+-+..++...+ ..++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 34488888888888876643 445555668999988888654333222233445555566666666653 567888899
Q ss_pred ChhHHHHHHHH---H-hC-c---cccceEEEEccccc
Q 027952 99 SLGAAVAVDFA---V-NH-P---EAVENLVFIDASVY 127 (216)
Q Consensus 99 S~Gg~~a~~~a---~-~~-~---~~~~~lvli~~~~~ 127 (216)
|+||...+..- . ++ | +...+++.-+++..
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 99987554433 2 23 3 23456776666554
No 253
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=62.51 E-value=53 Score=23.32 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=42.4
Q ss_pred hhhHHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeC-hhHHHHHHHHHhC
Q 027952 42 TYPLLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPS-LGAAVAVDFAVNH 112 (216)
Q Consensus 42 ~~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 112 (216)
+.+.+++.|. .++.++.+.. ..++.+.+++.+.+++++...+ ++++|++ .|.-++.++|.+.
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHHh
Confidence 3445665776 5888876543 4568899999999999997666 6666665 5667888888764
No 254
>PRK10279 hypothetical protein; Provisional
Probab=61.89 E-value=13 Score=29.76 Aligned_cols=34 Identities=24% Similarity=0.233 Sum_probs=25.2
Q ss_pred HHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 79 EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
..+..+ +..+...-.++|-|+|+.++..||....
T Consensus 22 GVL~aL-~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 22 GVINAL-KKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHH-HHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 334444 3445667799999999999999998654
No 255
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.86 E-value=15 Score=27.85 Aligned_cols=26 Identities=31% Similarity=0.257 Sum_probs=21.1
Q ss_pred hcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 88 YIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 88 ~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
.+...-.++|-|.|+.++..+|...+
T Consensus 25 ~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 25 MGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred cCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 34556689999999999999998653
No 256
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=61.33 E-value=14 Score=29.02 Aligned_cols=33 Identities=18% Similarity=0.052 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 79 EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
..+..+ ++.+...-.+.|-|+|+.++..||...
T Consensus 27 GVL~aL-eE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQAL-EEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHH-HHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 334444 444566679999999999999999864
No 257
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=60.65 E-value=82 Score=24.85 Aligned_cols=88 Identities=22% Similarity=0.186 Sum_probs=47.3
Q ss_pred CcEEEEcCCCCCcc------hHHhhhhHH-HhCCCeEEEEcCCCCCCC--------CCCC------CCCCChhhHHHHHH
Q 027952 24 SPVVLLHGFDSSCL------EWRCTYPLL-EEAGLETWAVDILGWGFS--------DLER------LPPCNVTSKREHFY 82 (216)
Q Consensus 24 ~~lv~~hG~~~~~~------~~~~~~~~l-~~~g~~v~~~d~~g~G~s--------~~~~------~~~~~~~~~~~~~~ 82 (216)
..+||+=|.+.+.. ....+.+.+ ...+-..+.+-.+|.|.. .... .....+++.+....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 34566666654332 123455555 222224445556677761 1110 11134444444433
Q ss_pred HHH-HHh-cCCCeEEEeeChhHHHHHHHHHh
Q 027952 83 QLW-KTY-IKRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 83 ~~~-~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
.++ +.+ ..+.+.++|+|-|+..|=.+|..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 333 444 56679999999999998888853
No 258
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=59.47 E-value=14 Score=29.30 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=22.3
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+.+++++.+..+..++|||+|=..|..++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 334445556788999999999887777664
No 259
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=59.00 E-value=14 Score=29.20 Aligned_cols=28 Identities=39% Similarity=0.620 Sum_probs=21.5
Q ss_pred HHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 83 QLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 83 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
++++..+..+-.++|||+|-..|+.++.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 4445556778899999999888877664
No 260
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=58.57 E-value=8.6 Score=30.87 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=21.9
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+.++++..+..+-.++|||+|=..|+.+|.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 334455557788899999999887776654
No 261
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=58.55 E-value=89 Score=24.59 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=59.5
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEE-EeeC
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMIL-VGPS 99 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~G~S 99 (216)
..+.||++--|+.++.+.|...++.+...|-.=+.+=.||. .. ...|.....--.....+++.-.-++.+ ..||
T Consensus 132 ~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~--~t---~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs 206 (266)
T PRK13398 132 KTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI--RT---FETYTRNTLDLAAVAVIKELSHLPIIVDPSHA 206 (266)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC--CC---CCCCCHHHHHHHHHHHHHhccCCCEEEeCCCc
Confidence 45689999999999999999999999887764344445553 11 123443333333334444443456777 7999
Q ss_pred hhH----HHHHHHHHhCccccceEEEEcccc
Q 027952 100 LGA----AVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 100 ~Gg----~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
.|. ......|.... .+++++-.-..
T Consensus 207 ~G~~~~v~~~~~aAva~G--a~Gl~iE~H~~ 235 (266)
T PRK13398 207 TGRRELVIPMAKAAIAAG--ADGLMIEVHPE 235 (266)
T ss_pred ccchhhHHHHHHHHHHcC--CCEEEEeccCC
Confidence 982 22233333333 56777765433
No 262
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=58.20 E-value=42 Score=24.08 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=42.2
Q ss_pred hhHHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee-ChhHHHHHHHHHhCc
Q 027952 43 YPLLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP-SLGAAVAVDFAVNHP 113 (216)
Q Consensus 43 ~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~-S~Gg~~a~~~a~~~~ 113 (216)
.+.+...|. .++.++.+. ...|+.+.+++.+.+++++...+ ++|+|+ +.|..++.++|.+..
T Consensus 44 ~~~~~~~Gad~v~~~~~~~--------~~~~~~~~~a~al~~~i~~~~p~-~Vl~~~t~~g~~la~rlAa~L~ 107 (168)
T cd01715 44 AAALKAYGADKVLVAEDPA--------LAHYLAEPYAPALVALAKKEKPS-HILAGATSFGKDLAPRVAAKLD 107 (168)
T ss_pred HHHHHhcCCCEEEEecChh--------hcccChHHHHHHHHHHHHhcCCC-EEEECCCccccchHHHHHHHhC
Confidence 455555665 466665432 23467889999999999887654 555555 567788888888753
No 263
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.41 E-value=18 Score=26.18 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 80 HFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 80 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
.+..+ +......-.++|-|.|+.++..++..++
T Consensus 18 vl~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRAL-EEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34444 3334556799999999999999998764
No 264
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=57.27 E-value=17 Score=29.10 Aligned_cols=31 Identities=23% Similarity=0.165 Sum_probs=24.4
Q ss_pred HHHHHhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 83 QLWKTYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 83 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
+.++..+..+-.|.|-|+|+.++..+|....
T Consensus 31 ~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 31 KALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3344446677899999999999999999643
No 265
>PRK06490 glutamine amidotransferase; Provisional
Probab=56.88 E-value=89 Score=24.07 Aligned_cols=84 Identities=19% Similarity=0.104 Sum_probs=44.7
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCC---CCC----------CCCCCChhhHHHHHHHHHHHh
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS---DLE----------RLPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s---~~~----------~~~~~~~~~~~~~~~~~~~~~ 88 (216)
....+|+.|--.+..... .+.|.+.|+.+-.++.. .|+. +.. ....++...+...+.++++..
T Consensus 7 ~~~vlvi~h~~~~~~g~l---~~~l~~~g~~~~v~~~~-~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~ 82 (239)
T PRK06490 7 KRPVLIVLHQERSTPGRV---GQLLQERGYPLDIRRPR-LGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVP 82 (239)
T ss_pred CceEEEEecCCCCCChHH---HHHHHHCCCceEEEecc-CCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHH
Confidence 345667778665555554 34444555444433211 0100 000 012233445566666777665
Q ss_pred cCCCeEEEeeChhHHHHHHHH
Q 027952 89 IKRPMILVGPSLGAAVAVDFA 109 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a 109 (216)
....+=++|.|+|..+...+.
T Consensus 83 ~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 83 LKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred HHCCCCEEEECHhHHHHHHHc
Confidence 334456999999999877764
No 266
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=56.82 E-value=10 Score=27.80 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=24.7
Q ss_pred CcEEEEcCC---CCCcchHHhhhhHHHhCCCeEEEEc
Q 027952 24 SPVVLLHGF---DSSCLEWRCTYPLLEEAGLETWAVD 57 (216)
Q Consensus 24 ~~lv~~hG~---~~~~~~~~~~~~~l~~~g~~v~~~d 57 (216)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 469999942 2334456778899999999988764
No 267
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=56.61 E-value=4.9 Score=38.27 Aligned_cols=29 Identities=31% Similarity=0.288 Sum_probs=21.6
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEeeChhHH
Q 027952 75 TSKREHFYQLWKTYIKRPMILVGPSLGAA 103 (216)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 103 (216)
..+.-.+.+++..++..+-.|+|||.|-+
T Consensus 566 tAiQiaLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 566 TAIQIALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHHhcCCCCCcccccccchh
Confidence 33334566777778888899999999954
No 268
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=55.87 E-value=67 Score=27.27 Aligned_cols=69 Identities=16% Similarity=0.098 Sum_probs=43.7
Q ss_pred HHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccceEEEE
Q 027952 45 LLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVENLVFI 122 (216)
Q Consensus 45 ~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~lvli 122 (216)
.+.+.+|+++.+|.+|.-. .-+...+.+..+.+......+++|--++-|.-+...|..+.+ .+.++|+.
T Consensus 177 ~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 3444579999999987521 123355566666555556667888878777766666665533 35667664
No 269
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=55.61 E-value=13 Score=29.24 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=27.8
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEc
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVD 57 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 57 (216)
.-.||++|....+......+.+.|.++||.++.++
T Consensus 230 ~G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 230 PGAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CCcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 34688999766666677888999999999988764
No 270
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.37 E-value=21 Score=26.86 Aligned_cols=29 Identities=28% Similarity=0.273 Sum_probs=23.4
Q ss_pred HHHhcCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 85 WKTYIKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 85 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
+++.+...-.++|.|.|+..+..+|...+
T Consensus 20 L~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 20 LAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33445566799999999999999999775
No 271
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=54.87 E-value=1.3e+02 Score=25.25 Aligned_cols=72 Identities=10% Similarity=0.092 Sum_probs=43.2
Q ss_pred CcEEEEcCCCCCcc---hHHhhhhHHHhCCCeEEEEcCCC---CCCCCCCCCCCCChhhHHHHHHHHHHH---hcCCCeE
Q 027952 24 SPVVLLHGFDSSCL---EWRCTYPLLEEAGLETWAVDILG---WGFSDLERLPPCNVTSKREHFYQLWKT---YIKRPMI 94 (216)
Q Consensus 24 ~~lv~~hG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g---~G~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 94 (216)
.++++++-+...-+ ....-...|.+.|+.++-+. +| ||+... ....+.++....+.+.+.. +...++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGK--GRLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccC--CCCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 57777776553322 33455677888887776554 23 343332 2456788888888877754 3445566
Q ss_pred EEee
Q 027952 95 LVGP 98 (216)
Q Consensus 95 l~G~ 98 (216)
+.|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 6555
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=54.44 E-value=17 Score=28.46 Aligned_cols=29 Identities=28% Similarity=0.123 Sum_probs=21.5
Q ss_pred HHHHHhc-CCCeEEEeeChhHHHHHHHHHh
Q 027952 83 QLWKTYI-KRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 83 ~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
+.+++.+ ..+-.++|||+|=..|..++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3444445 7788999999999888777653
No 273
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=54.41 E-value=74 Score=27.49 Aligned_cols=88 Identities=15% Similarity=0.207 Sum_probs=57.2
Q ss_pred EEcCCCCCcchH-HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHH
Q 027952 28 LLHGFDSSCLEW-RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAV 106 (216)
Q Consensus 28 ~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 106 (216)
|--|++.+.... ..-.+.-..+||+|+.+|-.|.- .+-......+..+++.-.++.+..+|.-+=|.=+.
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~---------~~~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv 513 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRM---------HNNAPLMTSLAKLIKVNKPDLILFVGEALVGNDSV 513 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccc---------cCChhHHHHHHHHHhcCCCceEEEehhhhhCcHHH
Confidence 345677665543 23445556679999999988742 22233556677777777788899999988877665
Q ss_pred HHHHh---------CccccceEEEEcc
Q 027952 107 DFAVN---------HPEAVENLVFIDA 124 (216)
Q Consensus 107 ~~a~~---------~~~~~~~lvli~~ 124 (216)
.-+.+ .|..++++++.-.
T Consensus 514 ~q~~~fn~al~~~~~~r~id~~~ltk~ 540 (587)
T KOG0781|consen 514 DQLKKFNRALADHSTPRLIDGILLTKF 540 (587)
T ss_pred HHHHHHHHHHhcCCCccccceEEEEec
Confidence 54433 2445777777543
No 274
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=54.34 E-value=1.4e+02 Score=25.72 Aligned_cols=61 Identities=13% Similarity=0.135 Sum_probs=40.5
Q ss_pred CCcEEEEcCCCCC---cchHHhhhhHHHhCCCeEEEEcCCC----CCCCCCCCCCCCChhhHHHHHHHHHH
Q 027952 23 TSPVVLLHGFDSS---CLEWRCTYPLLEEAGLETWAVDILG----WGFSDLERLPPCNVTSKREHFYQLWK 86 (216)
Q Consensus 23 ~~~lv~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g----~G~s~~~~~~~~~~~~~~~~~~~~~~ 86 (216)
+.++++++-+... +...+.-...|.+.|+.|+-++. | ||+.... .....++.++.+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~G--rm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVG--RMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCC--CCCCHHHHHHHHHHHHh
Confidence 4678888866544 33344566788889999886654 3 4554433 45677888888887764
No 275
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=53.89 E-value=1e+02 Score=23.78 Aligned_cols=89 Identities=15% Similarity=0.033 Sum_probs=48.2
Q ss_pred CCCcEEEEcCCC--CCcchH-HhhhhHHHhCCCeEEEEcCCCCCC--CCCCC---CCCCChhhHHH-----HHHHHHHHh
Q 027952 22 KTSPVVLLHGFD--SSCLEW-RCTYPLLEEAGLETWAVDILGWGF--SDLER---LPPCNVTSKRE-----HFYQLWKTY 88 (216)
Q Consensus 22 ~~~~lv~~hG~~--~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~--s~~~~---~~~~~~~~~~~-----~~~~~~~~~ 88 (216)
+++.|+|++--. ++.+.| +.+.+.|.+.|+.+..++...--. -...+ ...-+...+.+ .+.+.++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 467899998765 334444 456778888899988887652100 00000 00111111221 222333333
Q ss_pred cCCCeEEEeeChhHHHHHHHHH
Q 027952 89 IKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
-..-..++|.|.|+.++.....
T Consensus 110 ~~~G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 110 VKNGTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HHCCCEEEEECHHHHhhhccce
Confidence 2233789999999988655443
No 276
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional
Probab=53.60 E-value=72 Score=26.32 Aligned_cols=63 Identities=13% Similarity=-0.061 Sum_probs=43.1
Q ss_pred hhhHHHh--CCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeC-hhHHHHHHHHHhCc
Q 027952 42 TYPLLEE--AGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPS-LGAAVAVDFAVNHP 113 (216)
Q Consensus 42 ~~~~l~~--~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~~~ 113 (216)
.++.|.. +|- .|+..|.+. ...|..+.+++.+.+++++.... ++|+|++ .|--++.++|.+..
T Consensus 75 ~a~~l~~~~~Gad~V~~~~~~~--------l~~y~~e~~a~al~~li~~~~P~-~vL~~~T~~GrdlApRlAarL~ 141 (356)
T PLN00022 75 AASHAASSHPSVSEVLVADSDK--------LTHPLAEPWAKLVVLAQQKGGYS-HILAASTSFGKNVLPRAAALLD 141 (356)
T ss_pred HHHHHhhccCCCCEEEEecCch--------hcccChHHHHHHHHHHHHhcCCC-EEEECCCCchhHHHHHHHHHhC
Confidence 4455543 344 566665543 24678999999999999998755 5566555 56689999998753
No 277
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=53.55 E-value=62 Score=25.88 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=44.2
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCC---------------CCCCCCCCCCCCChhhHHHHHHHHHHH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILG---------------WGFSDLERLPPCNVTSKREHFYQLWKT 87 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g---------------~G~s~~~~~~~~~~~~~~~~~~~~~~~ 87 (216)
-|.|+|.-|.++ ..+.|++.||+|+..|+-- .|.-++. ....+.+...+.+.++++.
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~-~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPG-VLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChH-HhcCCHHHHHHHHHHHHHH
Confidence 377888888543 5678899999999999853 1211211 1223567777888888888
Q ss_pred hcCCC-eEEEeeC
Q 027952 88 YIKRP-MILVGPS 99 (216)
Q Consensus 88 ~~~~~-~~l~G~S 99 (216)
.+.++ +.=+||.
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 86443 3334554
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=53.34 E-value=26 Score=25.20 Aligned_cols=24 Identities=29% Similarity=0.188 Sum_probs=20.3
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
+...-.++|-|.|+.+|..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 445669999999999999999765
No 279
>PHA02114 hypothetical protein
Probab=51.72 E-value=21 Score=23.28 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=28.3
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEE
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAV 56 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~ 56 (216)
-+||+=-.+.++..-|..++..|.+.||.|++-
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 467777778888889999999999999999874
No 280
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=51.67 E-value=18 Score=30.49 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcccc
Q 027952 79 EHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAV 116 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~ 116 (216)
..+..+.++ +..+-++.|-|.|+.+|..++.+.++.+
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 344444444 4455689999999999999999766553
No 281
>PRK14974 cell division protein FtsY; Provisional
Probab=51.37 E-value=1e+02 Score=25.20 Aligned_cols=68 Identities=15% Similarity=0.236 Sum_probs=44.4
Q ss_pred HHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCc--cccceEEEE
Q 027952 46 LEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHP--EAVENLVFI 122 (216)
Q Consensus 46 l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~~lvli 122 (216)
....|++++.+|-.|... .-....+.+..+.+......++++.-+.-|.-+..-+..+. -.++++|+.
T Consensus 218 ~~~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 218 AKARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HHhCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 344578999999987632 22334556666666666666778877777776666665543 246788875
No 282
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=51.26 E-value=20 Score=25.96 Aligned_cols=73 Identities=15% Similarity=0.049 Sum_probs=46.2
Q ss_pred EEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-----CCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 27 VLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-----LPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 27 v~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
|++-|.|++...-.+++.+|..+ |..-.+.+|+.--|.... .-+|+++. .....++.+...-=+|+|.|..
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~---vFsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDE---VFSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHH---HHHHHHHhcCCCCCEEEEEeCC
Confidence 56668888888778888888777 776666666654442111 22344333 2334556665444589999998
Q ss_pred HH
Q 027952 102 AA 103 (216)
Q Consensus 102 g~ 103 (216)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 86
No 283
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=50.78 E-value=11 Score=31.58 Aligned_cols=42 Identities=21% Similarity=0.200 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceE
Q 027952 77 KREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENL 119 (216)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~l 119 (216)
.+..+..+.++ +..+-++.|-|.|+.+|..++.+.++.+..+
T Consensus 82 h~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 82 HFGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33444455444 4556689999999999999999776665444
No 284
>PRK02399 hypothetical protein; Provisional
Probab=50.66 E-value=1.5e+02 Score=24.93 Aligned_cols=95 Identities=23% Similarity=0.203 Sum_probs=58.7
Q ss_pred EEEcCCCCCc-chHHhhhhHHHhCCCeEEEEcCCCCCCCCC-CC---------------------CCCCChhhHHHHHHH
Q 027952 27 VLLHGFDSSC-LEWRCTYPLLEEAGLETWAVDILGWGFSDL-ER---------------------LPPCNVTSKREHFYQ 83 (216)
Q Consensus 27 v~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~-~~---------------------~~~~~~~~~~~~~~~ 83 (216)
|++-|...+. ++..-+.+.+.++|..++.+|.-..|.... .+ ....-++.+++....
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4444544444 455566777778899999999843331110 00 011112445555566
Q ss_pred HHHHh----cCCCeEEEeeChhHHHHHHHHHhCccccceEEE
Q 027952 84 LWKTY----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVF 121 (216)
Q Consensus 84 ~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvl 121 (216)
+++.+ ..+-++-+|-|.|..+++..+...|=-+-++++
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 66554 344588889999999999999888866666665
No 285
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=50.59 E-value=1.5e+02 Score=24.92 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=60.5
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC---------CC-------------CCChhhHHHHHH
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER---------LP-------------PCNVTSKREHFY 82 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---------~~-------------~~~~~~~~~~~~ 82 (216)
+|+++--+..=..++.-+.+.+.+.|..++.+|.-=.+...... .. ...++.+++.+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 34444333333345666778888899999999974444332220 00 012334455555
Q ss_pred HHHHHh----cCCCeEEEeeChhHHHHHHHHHhCccccceEEE
Q 027952 83 QLWKTY----IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVF 121 (216)
Q Consensus 83 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvl 121 (216)
.++..+ ..+-++-+|-|.|..++...+...|=-+-++++
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 666665 234578889999999999999888866666665
No 286
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=50.11 E-value=74 Score=28.39 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=30.5
Q ss_pred CCCCcEEEEcCCCCCc---chHHhhhhHHHhCCCeEEEEcCCCC
Q 027952 21 SKTSPVVLLHGFDSSC---LEWRCTYPLLEEAGLETWAVDILGW 61 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~ 61 (216)
.-+.|++++||..... +.-..+.+.|...|..+-..-+|+-
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e 592 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDE 592 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCC
Confidence 3468999999988543 3456688999998888777766653
No 287
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=49.82 E-value=62 Score=24.61 Aligned_cols=38 Identities=13% Similarity=0.219 Sum_probs=28.6
Q ss_pred CCCCcEEEEcCCCCCcch--H-HhhhhHHHhCCCeEEEEcC
Q 027952 21 SKTSPVVLLHGFDSSCLE--W-RCTYPLLEEAGLETWAVDI 58 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~ 58 (216)
+.++.|.|++--+.+... | ....+.|.+.|+.+.-+++
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 347799999977665543 4 5677889999999888876
No 288
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=49.68 E-value=21 Score=27.08 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=26.5
Q ss_pred CcEEEEcCCC-CCcchHHhhhhHHHhCCCeEEEEc
Q 027952 24 SPVVLLHGFD-SSCLEWRCTYPLLEEAGLETWAVD 57 (216)
Q Consensus 24 ~~lv~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d 57 (216)
..||++|... .+.+....+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 4689999743 445567789999999999988765
No 289
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.60 E-value=31 Score=26.88 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCC-CeEEEeeChhHHHHHHHHHhCcc
Q 027952 78 REHFYQLWKTYIKR-PMILVGPSLGAAVAVDFAVNHPE 114 (216)
Q Consensus 78 ~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~ 114 (216)
+..+..+.++ ... .-.++|.|.|+.++..++...+.
T Consensus 14 ~Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 14 AGVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344444444 333 45999999999999999987654
No 290
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=49.45 E-value=1.5e+02 Score=24.37 Aligned_cols=89 Identities=19% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCCcEEEEcCCCCCc-----chHHhhhhHHHh-CCCeEEEEcCCCCCCCCCCC-------CCC--------CChhhHHHH
Q 027952 22 KTSPVVLLHGFDSSC-----LEWRCTYPLLEE-AGLETWAVDILGWGFSDLER-------LPP--------CNVTSKREH 80 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~-----~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~-------~~~--------~~~~~~~~~ 80 (216)
.+..|+++-|..... ...-.+...|.. .+.+++++-.+|.|...... .+. .++...+..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 345677777754221 223345566655 46888888888988652210 000 112222222
Q ss_pred HHH-HHHHh-cCCCeEEEeeChhHHHHHHHHH
Q 027952 81 FYQ-LWKTY-IKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 81 ~~~-~~~~~-~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
... +++++ ..+.|++.|+|-|+.+|=.+|.
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHH
Confidence 222 22333 6678999999999998877775
No 291
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=48.76 E-value=1.6e+02 Score=24.71 Aligned_cols=73 Identities=11% Similarity=0.077 Sum_probs=44.7
Q ss_pred CCcEEEEcCCCCCc---chHHhhhhHHHhCCCeEEEEcCCC---CCCCCCCCCCCCChhhHHHHHHHHHHH--hcCCCeE
Q 027952 23 TSPVVLLHGFDSSC---LEWRCTYPLLEEAGLETWAVDILG---WGFSDLERLPPCNVTSKREHFYQLWKT--YIKRPMI 94 (216)
Q Consensus 23 ~~~lv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g---~G~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (216)
+.++++++-+...- .....-.+.|.+.|+.++-++ +| ||+... ....+.++..+.+...+.. +...++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~--gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP--GRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC--CCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 46777887664221 123455678888898887554 34 343332 2456788888888877743 3445566
Q ss_pred EEee
Q 027952 95 LVGP 98 (216)
Q Consensus 95 l~G~ 98 (216)
+.|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6665
No 292
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=48.44 E-value=22 Score=29.61 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=23.9
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCccccceE
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHPEAVENL 119 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~l 119 (216)
+..+-+|.|-|.|+.+|..+|.+.++.+..+
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 5556789999999999999999655544333
No 293
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=48.19 E-value=1.4 Score=34.14 Aligned_cols=90 Identities=16% Similarity=-0.135 Sum_probs=54.6
Q ss_pred CCCcEEEEcCCCCCcchHHhh-hhHHHhCCCeEEEEcCCCCCCCCCCC---CCCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 22 KTSPVVLLHGFDSSCLEWRCT-YPLLEEAGLETWAVDILGWGFSDLER---LPPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~-~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
.+...+..||...+......+ ...+...++.++..|+++++.+.... ....+.......+...........+.++|
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 166 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWG 166 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhccccee
Confidence 455677788875555443333 34445556889999999998885432 01112222222222222233456799999
Q ss_pred eChhHHHHHHHHHh
Q 027952 98 PSLGAAVAVDFAVN 111 (216)
Q Consensus 98 ~S~Gg~~a~~~a~~ 111 (216)
.|+||..++.....
T Consensus 167 ~s~g~~~~~~~~~~ 180 (299)
T COG1073 167 ESLGGALALLLLGA 180 (299)
T ss_pred eccCceeecccccc
Confidence 99999998887654
No 294
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=47.33 E-value=63 Score=23.44 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=44.2
Q ss_pred HHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee-ChhHHHHHHHHHhCc-cccceEEE
Q 027952 45 LLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP-SLGAAVAVDFAVNHP-EAVENLVF 121 (216)
Q Consensus 45 ~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~-S~Gg~~a~~~a~~~~-~~~~~lvl 121 (216)
.+...|. .++..+.+. ...++.+.+++.+.+++++...+ ++|+|+ +.|+.++.++|.+.. ..+..++-
T Consensus 54 ~~~~~Gad~v~~~~~~~--------~~~~~~~~~a~~l~~~i~~~~p~-~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~ 124 (181)
T cd01985 54 EALAMGADKVLLVEDPA--------LAGYDPEATAKALAALIKKEKPD-LILAGATSIGKQLAPRVAALLGVPQISDVTK 124 (181)
T ss_pred HHHHhCCCEEEEEecCc--------ccCCChHHHHHHHHHHHHHhCCC-EEEECCcccccCHHHHHHHHhCCCcceeEEE
Confidence 3334455 566666443 24578889999999999887655 555555 567788999888753 22444444
Q ss_pred E
Q 027952 122 I 122 (216)
Q Consensus 122 i 122 (216)
+
T Consensus 125 l 125 (181)
T cd01985 125 L 125 (181)
T ss_pred E
Confidence 3
No 295
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=46.89 E-value=69 Score=25.89 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=22.3
Q ss_pred CCCCcEEEEcCCCCCcchH--HhhhhHHHhCC
Q 027952 21 SKTSPVVLLHGFDSSCLEW--RCTYPLLEEAG 50 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~--~~~~~~l~~~g 50 (216)
..+|.++=+||+.|+...+ +-+++++...|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 5678888899999999876 33666666554
No 296
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=46.65 E-value=74 Score=22.84 Aligned_cols=48 Identities=4% Similarity=0.080 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHh--cCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 77 KREHFYQLWKTY--IKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 77 ~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
..+.+.++++.+ ...++.+.|-|..|...+.++...++.+..+|=.+|
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 333444555444 456799999999999888888776666776665554
No 297
>COG3933 Transcriptional antiterminator [Transcription]
Probab=46.12 E-value=1.2e+02 Score=25.90 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=54.9
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhH
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGA 102 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 102 (216)
-.+||+.||......+ -.+++.|-+. =-+.++|.| ...+.++..+.+.+.+++.+...=.++=..||.
T Consensus 109 v~vIiiAHG~sTASSm-aevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 109 VKVIIIAHGYSTASSM-AEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eeEEEEecCcchHHHH-HHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 3678999997655443 4566666555 467889986 457899999999999999866654555568998
Q ss_pred HHHHHHHH
Q 027952 103 AVAVDFAV 110 (216)
Q Consensus 103 ~~a~~~a~ 110 (216)
..++.-..
T Consensus 177 L~~f~~~i 184 (470)
T COG3933 177 LTSFGSII 184 (470)
T ss_pred HHHHHHHH
Confidence 86665544
No 298
>PF03283 PAE: Pectinacetylesterase
Probab=46.11 E-value=67 Score=26.56 Aligned_cols=49 Identities=20% Similarity=0.233 Sum_probs=31.1
Q ss_pred HHHHHHHH-h-cCCCeEEEeeChhHHHHHHHHHh----CccccceEEEEcccccc
Q 027952 80 HFYQLWKT-Y-IKRPMILVGPSLGAAVAVDFAVN----HPEAVENLVFIDASVYA 128 (216)
Q Consensus 80 ~~~~~~~~-~-~~~~~~l~G~S~Gg~~a~~~a~~----~~~~~~~lvli~~~~~~ 128 (216)
.+.++++. + ..++++|.|-|.||.-++..+-. .|..++-..+.++....
T Consensus 143 vl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 143 VLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred HHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 34444444 3 45789999999999977776543 45445555555555544
No 299
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=45.89 E-value=1.2e+02 Score=22.36 Aligned_cols=62 Identities=15% Similarity=0.157 Sum_probs=38.5
Q ss_pred CCCcEEEEcCCCCC---cchHHhhhhHHHhCCCeEEEEcCCCC---CCCCCCCCCCCChhhHHHHHHHHHH
Q 027952 22 KTSPVVLLHGFDSS---CLEWRCTYPLLEEAGLETWAVDILGW---GFSDLERLPPCNVTSKREHFYQLWK 86 (216)
Q Consensus 22 ~~~~lv~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~---G~s~~~~~~~~~~~~~~~~~~~~~~ 86 (216)
.+.++++++-+... +.....-.+.|.+.|+.|+-+. +|+ |+... ....++++.++.+...+.
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~--g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGY--GALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccC--CCCCCHHHHHHHHHHHhc
Confidence 35678888764422 2234556678888898888776 444 44332 234577888877776553
No 300
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=45.64 E-value=1e+02 Score=22.42 Aligned_cols=54 Identities=19% Similarity=0.128 Sum_probs=38.8
Q ss_pred HHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 45 LLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 45 ~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
.|.+.|+..+.+|.-.+=..+. ...-..++.+++.++.+....+++.|+-.|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~---~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPY---EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCC---cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 3899999999999987643322 22334567777777776666668999999886
No 301
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=44.38 E-value=50 Score=26.61 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.6
Q ss_pred eEEEeeChhHHHHHHHHHhC
Q 027952 93 MILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~ 112 (216)
=.++|.|+||.+|..+|..+
T Consensus 34 D~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 34 DWIAGTSTGGILALALLHGK 53 (312)
T ss_pred cEEEeeChHHHHHHHHHcCC
Confidence 47999999999999999754
No 302
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=44.34 E-value=93 Score=20.65 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=47.5
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc-CCCeEEEeeChhH
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI-KRPMILVGPSLGA 102 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg 102 (216)
.||.-|| .-+......++.+... -..+.++++. ...+.+++.+.+.+.++... .+.+.++.-=.||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 3677798 4444555666666655 3477777753 34678999999999998874 5556666666665
Q ss_pred HHHHHH
Q 027952 103 AVAVDF 108 (216)
Q Consensus 103 ~~a~~~ 108 (216)
...-..
T Consensus 70 sp~n~a 75 (116)
T PF03610_consen 70 SPFNEA 75 (116)
T ss_dssp HHHHHH
T ss_pred ccchHH
Confidence 544333
No 303
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.11 E-value=20 Score=28.94 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
+..+..+.++ +..+-++.|-|.|+.+|..++...
T Consensus 84 ~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 84 VGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 3344444443 455668999999999999998854
No 304
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=43.49 E-value=1.1e+02 Score=22.46 Aligned_cols=62 Identities=24% Similarity=0.374 Sum_probs=37.1
Q ss_pred CCCcEEEEcCCCCCc---chHHhhhhHHHhCCCeEEEEcCCC--CCCCCCCCCCCCChhhHHHHHHHHHHHh
Q 027952 22 KTSPVVLLHGFDSSC---LEWRCTYPLLEEAGLETWAVDILG--WGFSDLERLPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g--~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 88 (216)
..+|++++||..... ..=..+.+.|.+.|..+...-.++ ||-.. .....+..+.+.+++++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~-----~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN-----PENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS-----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC-----chhHHHHHHHHHHHHHHH
Confidence 568999999977543 233568888988887666555554 43221 112334555555555543
No 305
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.37 E-value=53 Score=25.13 Aligned_cols=35 Identities=23% Similarity=0.128 Sum_probs=24.2
Q ss_pred HHHHHHHHHh-cCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 79 EHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 79 ~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
..+..+.++- ..+.-.+.|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444444442 2224589999999999999999764
No 306
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=41.91 E-value=74 Score=22.78 Aligned_cols=56 Identities=18% Similarity=0.170 Sum_probs=36.4
Q ss_pred hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHH
Q 027952 42 TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDF 108 (216)
Q Consensus 42 ~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 108 (216)
+...+.+ |-.|++.|.+| ...+-+++++.+.++-.. +.+-.+++|-|.|=.=++.-
T Consensus 60 il~~i~~-~~~vi~Ld~~G---------k~~sSe~fA~~l~~~~~~-G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRG---------KALSSEEFADFLERLRDD-GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcCC-CCeEEEEecCC---------CcCChHHHHHHHHHHHhc-CCeEEEEEeCcccCCHHHHH
Confidence 4444544 47899999986 345667777777766444 34557888888885444444
No 307
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=41.65 E-value=26 Score=27.52 Aligned_cols=45 Identities=13% Similarity=0.184 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEE
Q 027952 77 KREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVF 121 (216)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvl 121 (216)
.+..+.++++.....--.++|.|+|+.-...|..+.+.+-.+.++
T Consensus 26 TAGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 26 TAGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred hHHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 455667777565444457899999999999999988876554443
No 308
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=41.50 E-value=31 Score=27.11 Aligned_cols=70 Identities=10% Similarity=0.131 Sum_probs=45.4
Q ss_pred CCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEee
Q 027952 22 KTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGP 98 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~ 98 (216)
..|+||++.|+.++.. ....+.+.|..+|++|+++..|. +-+..-..+-.+-.++ ..+.+.|.=.
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 4589999999997764 56789999999999999985542 1111222333455555 3456666666
Q ss_pred ChhHH
Q 027952 99 SLGAA 103 (216)
Q Consensus 99 S~Gg~ 103 (216)
|+=+-
T Consensus 122 SWY~~ 126 (264)
T TIGR03709 122 SHYED 126 (264)
T ss_pred ccccc
Confidence 65433
No 309
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=40.59 E-value=17 Score=26.12 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=29.0
Q ss_pred EEEcCCCCCCCCC--CCCCCCChhhHHHHH----HHHHHHh----cCCCeEEEeeChhHH
Q 027952 54 WAVDILGWGFSDL--ERLPPCNVTSKREHF----YQLWKTY----IKRPMILVGPSLGAA 103 (216)
Q Consensus 54 ~~~d~~g~G~s~~--~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~l~G~S~Gg~ 103 (216)
+.|-+-|||.... .+...++.++.++.+ ..+.+.. .+.++.|+|=|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3455558887722 225567888899888 4444443 345788888888766
No 310
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=40.33 E-value=1.4e+02 Score=25.21 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=45.9
Q ss_pred HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceE
Q 027952 40 RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENL 119 (216)
Q Consensus 40 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~l 119 (216)
+.++..|.+.|..|+++- ..+.+++...+...++....++-.++ .-||.+...+..++|+..+.+
T Consensus 75 d~vaa~l~~~gi~v~a~~-------------~~~~~~y~~~~~~~l~~~~~~p~~i~--DdGg~~~~~~~~~~~~~~~~~ 139 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWK-------------GETLEEYWWCIEQALKFPDGEPNMIL--DDGGDLTLLIHKKHPELLPGI 139 (413)
T ss_pred HHHHHHHHhcCceEEEEc-------------CCCHHHHHHHHHHHHhccCCCCcEEE--ecchHHHHHHHhhhhhhhhcc
Confidence 457788888888888872 23566777778888776544555555 788888888887777654443
Q ss_pred E
Q 027952 120 V 120 (216)
Q Consensus 120 v 120 (216)
+
T Consensus 140 ~ 140 (413)
T cd00401 140 R 140 (413)
T ss_pred E
Confidence 3
No 311
>COG0218 Predicted GTPase [General function prediction only]
Probab=40.27 E-value=39 Score=25.32 Aligned_cols=15 Identities=27% Similarity=0.663 Sum_probs=12.4
Q ss_pred EEEEcCCCCCCCCCC
Q 027952 53 TWAVDILGWGFSDLE 67 (216)
Q Consensus 53 v~~~d~~g~G~s~~~ 67 (216)
.+.+|+||+|....+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 778999999987654
No 312
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=40.15 E-value=49 Score=23.66 Aligned_cols=52 Identities=8% Similarity=-0.030 Sum_probs=32.9
Q ss_pred hhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhH
Q 027952 41 CTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGA 102 (216)
Q Consensus 41 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 102 (216)
.+...+.+ +-.+++.|-.|- ..+-+++++.+.++...-...-++++|-+.|=
T Consensus 59 ~il~~i~~-~~~~i~Ld~~Gk---------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 59 RILKKIPP-NDYVILLDERGK---------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp HHHCTSHT-TSEEEEE-TTSE---------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred HHHhhccC-CCEEEEEcCCCc---------cCChHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 34444444 477899998763 46778888888887766444568999999983
No 313
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=39.61 E-value=1.7e+02 Score=24.83 Aligned_cols=71 Identities=18% Similarity=0.160 Sum_probs=40.5
Q ss_pred hhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccceEE
Q 027952 43 YPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVENLV 120 (216)
Q Consensus 43 ~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~lv 120 (216)
.+.+...+|+++.+|.+|.... -+...+.+.++.+......+++|--++-|.-+...|..+.+ .+.++|
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~---------d~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giI 245 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQI---------DEELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVV 245 (428)
T ss_pred HHHHHhcCCCEEEEeCCCcccc---------CHHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEE
Confidence 3344456799999999886322 12244455555554445556666666656555555554332 356666
Q ss_pred EE
Q 027952 121 FI 122 (216)
Q Consensus 121 li 122 (216)
+.
T Consensus 246 lT 247 (428)
T TIGR00959 246 LT 247 (428)
T ss_pred Ee
Confidence 65
No 314
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=39.41 E-value=1.8e+02 Score=22.48 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=48.1
Q ss_pred cCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeC
Q 027952 30 HGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPS 99 (216)
Q Consensus 30 hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 99 (216)
.|+|.+.....+.++.+.+.|..-+.++-..||. .. ....+.+++++-+....+......+.|++-.
T Consensus 78 ~GyG~~~~~v~~tv~~~~~aG~agi~IEDq~~~~-~~--~~l~~~ee~~~kI~Aa~~a~~~~~~~I~ART 144 (238)
T PF13714_consen 78 TGYGNDPENVARTVRELERAGAAGINIEDQRCGH-GG--KQLVSPEEMVAKIRAAVDARRDPDFVIIART 144 (238)
T ss_dssp TTSSSSHHHHHHHHHHHHHCT-SEEEEESBSTTT-ST--T-B--HHHHHHHHHHHHHHHSSTTSEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHcCCcEEEeeccccCC-CC--CceeCHHHHHHHHHHHHHhccCCeEEEEEec
Confidence 4777768888899999999998877776655663 22 2456999999999999999865557777654
No 315
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=38.90 E-value=37 Score=26.06 Aligned_cols=71 Identities=13% Similarity=0.086 Sum_probs=47.5
Q ss_pred CCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEee
Q 027952 22 KTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGP 98 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~ 98 (216)
+.|+||++.|+.++.. ....+...|..+|+.|.++..|- .-+..-..+-.+-+++ ..+.+.|.=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 4589999999997764 46788999999999999886542 1122222344455566 4556777777
Q ss_pred ChhHHH
Q 027952 99 SLGAAV 104 (216)
Q Consensus 99 S~Gg~~ 104 (216)
|+=+-+
T Consensus 97 SwY~~~ 102 (230)
T TIGR03707 97 SWYNRA 102 (230)
T ss_pred chhhhH
Confidence 765543
No 316
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=38.79 E-value=46 Score=26.68 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 77 KREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
.+..+..+.++ +..+-.+.|.|.|+.+|..++...
T Consensus 84 h~Gvl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 84 HLGVVKALWEQ-DLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHHHHHc-CCCCCEEEEEcHHHHHHHHHHcCC
Confidence 33444444443 444568999999999999999754
No 317
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=38.62 E-value=1.1e+02 Score=24.26 Aligned_cols=17 Identities=18% Similarity=0.096 Sum_probs=12.5
Q ss_pred cCCCeEEEeeChhHHHH
Q 027952 89 IKRPMILVGPSLGAAVA 105 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a 105 (216)
...+++|+|.|++...-
T Consensus 196 ~L~~ivliGNSFe~y~~ 212 (273)
T PLN03093 196 RLNHIALFGNSFEMYEE 212 (273)
T ss_pred HcCCEEEEeCCHHHHHH
Confidence 34579999999886543
No 318
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=38.40 E-value=48 Score=26.69 Aligned_cols=65 Identities=18% Similarity=0.257 Sum_probs=41.3
Q ss_pred CCCCcceEEEeeeccCCCCCCCcEEEEc-CCC----CCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCC
Q 027952 3 VNFSESCIMSSVVKPLKPSKTSPVVLLH-GFD----SSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLE 67 (216)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~lv~~h-G~~----~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~ 67 (216)
.+++++.|+....+-..-...|.+++=. ... |-+..-......|...||+++.++--|.|.|+..
T Consensus 91 Sp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lGGlS~at~~~i~~ldAaG~DvIIVETVGvGQsev~ 160 (323)
T COG1703 91 SPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLGGLSRATREAIKLLDAAGYDVIIVETVGVGQSEVD 160 (323)
T ss_pred CCCCCccccccHhhHHhhccCCCeEEeecCCCccchhhhHHHHHHHHHHHhcCCCEEEEEecCCCcchhH
Confidence 4566666766666553333345555443 111 2223334577788888999999999999998753
No 319
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=37.37 E-value=60 Score=24.61 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=23.0
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcC
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDI 58 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 58 (216)
+.-+|++|-|-+.+ +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34577888887665 4568888999999987
No 320
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=36.50 E-value=38 Score=25.92 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=21.0
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCC
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDIL 59 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 59 (216)
=||++|-|.+.+ +..|+++||+|+.+|+.
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 556666665554 45688899999999973
No 321
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=36.20 E-value=2.1e+02 Score=22.39 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=56.0
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCC-eEEEEcCCCCCCCCC-CC-CCCCChhhHHHHHHHHHHHhcCCCeEE-E
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDL-ER-LPPCNVTSKREHFYQLWKTYIKRPMIL-V 96 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~G~s~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 96 (216)
..+.||++--|+.++.+.|...++.+.+.|- +++... +|. |.. +. ....++..+ . .+++.-.-++.+ .
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG~--s~y~~~~~~~~dl~~i----~-~lk~~~~~pV~~ds 201 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RGI--RTFEKATRNTLDLSAV----P-VLKKETHLPIIVDP 201 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CCC--CCCCCCCcCCcCHHHH----H-HHHHhhCCCEEEcC
Confidence 4577999999999999999999999988876 455543 333 322 11 112222222 2 233332356777 7
Q ss_pred eeChh----HHHHHHHHHhCccccceEEEEccc
Q 027952 97 GPSLG----AAVAVDFAVNHPEAVENLVFIDAS 125 (216)
Q Consensus 97 G~S~G----g~~a~~~a~~~~~~~~~lvli~~~ 125 (216)
.||.| ...+...|.... .+++++---.
T Consensus 202 ~Hs~G~r~~~~~~~~aAva~G--a~gl~iE~H~ 232 (260)
T TIGR01361 202 SHAAGRRDLVIPLAKAAIAAG--ADGLMIEVHP 232 (260)
T ss_pred CCCCCccchHHHHHHHHHHcC--CCEEEEEeCC
Confidence 99988 133333444443 4666665443
No 322
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=35.49 E-value=86 Score=25.78 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=28.2
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCC
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSD 65 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~ 65 (216)
|+|+|...- ..++.+++.|.++|+.|..+-..+.+..+
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 678886432 33678999999999999988777665433
No 323
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=35.27 E-value=74 Score=22.79 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=27.9
Q ss_pred CcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCC
Q 027952 24 SPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g 60 (216)
+.+|++-|+.++... =..+.+.|.+.|+.++.+|-.-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~ 40 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDN 40 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcc
Confidence 578999999988865 2457788888999999998543
No 324
>PLN02735 carbamoyl-phosphate synthase
Probab=35.15 E-value=2.4e+02 Score=27.33 Aligned_cols=83 Identities=16% Similarity=0.033 Sum_probs=48.4
Q ss_pred hhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcccc--
Q 027952 41 CTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAV-- 116 (216)
Q Consensus 41 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~-- 116 (216)
.....|.+.|+.++++|...---|..-. ...|...-..+.+.++++..+.+ .++. +.||..++.+|....+.+
T Consensus 599 ~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e~~d-~Vi~--~~Ggq~~l~la~~l~~~L~e 675 (1102)
T PLN02735 599 HASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPD-GIIV--QFGGQTPLKLALPIQKYLDK 675 (1102)
T ss_pred HHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHhCCC-EEEE--CCCchHHHHHHHHHHHHHHh
Confidence 4778999999999999876543231110 11222333466677777665544 3333 678777776665433322
Q ss_pred ---------ceEEEEcccc
Q 027952 117 ---------ENLVFIDASV 126 (216)
Q Consensus 117 ---------~~lvli~~~~ 126 (216)
.++.+++++.
T Consensus 676 ~~~fa~~~~~gi~i~G~s~ 694 (1102)
T PLN02735 676 NPPPSASGNGNVKIWGTSP 694 (1102)
T ss_pred ccchhhhhcCCeEEECCCH
Confidence 2567777754
No 325
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.03 E-value=73 Score=24.78 Aligned_cols=22 Identities=32% Similarity=0.481 Sum_probs=19.1
Q ss_pred CeEEEeeChhHHHHHHHHHhCc
Q 027952 92 PMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4579999999999999998765
No 326
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=34.90 E-value=73 Score=24.68 Aligned_cols=36 Identities=22% Similarity=0.012 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhc-CCCeEEEeeChhHHHHHHHHHhCc
Q 027952 78 REHFYQLWKTYI-KRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 78 ~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
+..+..+.++-. ...-.+.|-|+|+.+|..+|...+
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 334444444431 122349999999999999998754
No 327
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=34.27 E-value=70 Score=24.87 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=19.0
Q ss_pred CeEEEeeChhHHHHHHHHHhCc
Q 027952 92 PMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 92 ~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
.-.+.|-|.|+..+..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3578999999999999998764
No 328
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=34.19 E-value=2.3e+02 Score=22.34 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=38.3
Q ss_pred HHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhc------CCCeEEEeeChhHHHHHHHHHhCcc--ccc
Q 027952 46 LEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYI------KRPMILVGPSLGAAVAVDFAVNHPE--AVE 117 (216)
Q Consensus 46 l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~ 117 (216)
+...+|+++.+|-+|.... -....+.+..+.+... ...+++|--+..|.-++..+..+-+ .+.
T Consensus 150 ~~~~~~D~ViIDT~G~~~~---------d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~ 220 (272)
T TIGR00064 150 AKARNIDVVLIDTAGRLQN---------KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLT 220 (272)
T ss_pred HHHCCCCEEEEeCCCCCcc---------hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCC
Confidence 3446799999999987432 2223444444443332 4445566555555545555544322 367
Q ss_pred eEEEEc
Q 027952 118 NLVFID 123 (216)
Q Consensus 118 ~lvli~ 123 (216)
++|+.-
T Consensus 221 g~IlTK 226 (272)
T TIGR00064 221 GIILTK 226 (272)
T ss_pred EEEEEc
Confidence 777754
No 329
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=33.79 E-value=45 Score=25.83 Aligned_cols=19 Identities=26% Similarity=0.181 Sum_probs=14.0
Q ss_pred cCCCeEEEeeChhHHHHHH
Q 027952 89 IKRPMILVGPSLGAAVAVD 107 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~ 107 (216)
....+++.|||+|..=..+
T Consensus 233 ~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CCCEEEEEeCCCchhhHHH
Confidence 4467999999999763333
No 330
>PRK11460 putative hydrolase; Provisional
Probab=33.70 E-value=1.4e+02 Score=22.67 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=26.2
Q ss_pred CCCCcEEEEcCCCCCcc---hHHhhhhHHHhCCCeEEEEcCCC
Q 027952 21 SKTSPVVLLHGFDSSCL---EWRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g 60 (216)
...++++++||-....- .-..+.+.|.+.|..+-...++|
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~ 188 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVED 188 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 34678999999876543 23457778887776655554443
No 331
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.53 E-value=2.8e+02 Score=23.52 Aligned_cols=53 Identities=19% Similarity=0.102 Sum_probs=28.1
Q ss_pred hHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHH
Q 027952 44 PLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVA 105 (216)
Q Consensus 44 ~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 105 (216)
+.+.+.+|.++..|-.|.- ..-..+-+.+.++.+...++.+++|=-+.=|.-|
T Consensus 177 ~~fKke~fdvIIvDTSGRh---------~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaa 229 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRH---------KQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAA 229 (483)
T ss_pred HHHHhcCCcEEEEeCCCch---------hhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhH
Confidence 3566777999999987642 1223344445555555544444444333333333
No 332
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=33.40 E-value=1.8e+02 Score=24.60 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=61.1
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC-----CCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLER-----LPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
-.++++.--.+..+.-....+.+.+.|.-+.-.|..++-..-... ...++++.+++++......-.....+|.|-
T Consensus 49 ~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~ 128 (456)
T COG3946 49 GLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGP 128 (456)
T ss_pred eeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeec
Confidence 344444443444444445667777777888888877653221111 223455555555554444334556789999
Q ss_pred ChhHHHHHHHHHhCcc-ccceEEEEcc
Q 027952 99 SLGAAVAVDFAVNHPE-AVENLVFIDA 124 (216)
Q Consensus 99 S~Gg~~a~~~a~~~~~-~~~~lvli~~ 124 (216)
.-||.++...+++-|+ ++.+.|-.++
T Consensus 129 g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 129 GQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred CCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 9999999999988775 3455555554
No 333
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=33.39 E-value=1.9e+02 Score=21.10 Aligned_cols=60 Identities=8% Similarity=0.087 Sum_probs=36.4
Q ss_pred CCCcEEEEcCCCC---CcchHHhhhhHHHhCCCeEEEEcC--CCCCCCCCCCCCCCChhhHHHHHHH
Q 027952 22 KTSPVVLLHGFDS---SCLEWRCTYPLLEEAGLETWAVDI--LGWGFSDLERLPPCNVTSKREHFYQ 83 (216)
Q Consensus 22 ~~~~lv~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~--~g~G~s~~~~~~~~~~~~~~~~~~~ 83 (216)
.+.++++++.+.. .+...+.-.+.|.+.|+.++-++. ..||+.... ...+.++..+.+..
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~g~la~g~~g~g--~~~~~~~i~~~~~~ 175 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKESLLACGDYGRG--ALADLDDILQTIKE 175 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCcCcccCCCcccc--CCCCHHHHHHHHHH
Confidence 3567888886653 233456677889999998887764 235544332 33455666555543
No 334
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=33.26 E-value=43 Score=23.79 Aligned_cols=24 Identities=29% Similarity=0.220 Sum_probs=18.8
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
....-.+.|-|.||.+|+.++...
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCCccEEEEcChhhhhHHHHHhCC
Confidence 444568999999999998888863
No 335
>TIGR03586 PseI pseudaminic acid synthase.
Probab=33.23 E-value=2.7e+02 Score=22.74 Aligned_cols=80 Identities=18% Similarity=0.183 Sum_probs=48.8
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCC-eEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGL-ETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
..+.||++--|+ .+...|...++.+.+.|. .++.... .|.-+. ....++ ..+. .+++.-.-++.+..|
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL----~~i~-~lk~~f~~pVG~SDH 201 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANL----RTIP-DLAERFNVPVGLSDH 201 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCH----HHHH-HHHHHhCCCEEeeCC
Confidence 356789999999 588899999999988876 5666542 222221 111222 2222 333332456878999
Q ss_pred ChhHHHHHHHHH
Q 027952 99 SLGAAVAVDFAV 110 (216)
Q Consensus 99 S~Gg~~a~~~a~ 110 (216)
+.|-.++....+
T Consensus 202 t~G~~~~~aAva 213 (327)
T TIGR03586 202 TLGILAPVAAVA 213 (327)
T ss_pred CCchHHHHHHHH
Confidence 999655544444
No 336
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=33.07 E-value=1.6e+02 Score=22.57 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=28.9
Q ss_pred HHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEE
Q 027952 39 WRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILV 96 (216)
Q Consensus 39 ~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (216)
.+.+++.|.+.|+.|....+.- ..+...+.+.+...+++.+.+.+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~----------~~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD----------PENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-----------TT--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC----------ccccccHHHHHHHHHHHcCCCEEEEE
Confidence 4678889999999999998742 22344577788888888777766665
No 337
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.86 E-value=58 Score=28.52 Aligned_cols=31 Identities=23% Similarity=0.145 Sum_probs=22.9
Q ss_pred HHHH-HHhcCCCeEEEeeChhHHHHHHHHHhC
Q 027952 82 YQLW-KTYIKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 82 ~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
.+++ +..+..+-.++|||+|=..|...|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3444 355778889999999988777776643
No 338
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=32.42 E-value=1.3e+02 Score=23.49 Aligned_cols=38 Identities=16% Similarity=0.069 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHh-cCCCeEEEeeChhHHHHHHHHHhCcc
Q 027952 77 KREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHPE 114 (216)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~~ 114 (216)
.++.+....+.+ ...+++++|..-.|.++...|...+.
T Consensus 35 I~~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~~ 73 (257)
T cd05007 35 IARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELPP 73 (257)
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhccc
Confidence 344444444444 56789999999999999877776543
No 339
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=32.19 E-value=1.7e+02 Score=23.90 Aligned_cols=100 Identities=15% Similarity=0.220 Sum_probs=55.7
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh--
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG-- 101 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G-- 101 (216)
.+++++.- +....|..+.+.+..+++.---.=++-||..-.. ........-...+...+..+...+++|+|-|-=
T Consensus 214 apvfYvSn--SPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~-i~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~D 290 (373)
T COG4850 214 APVFYVSN--SPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDN-IIESGAARKGQSLRNILRRYPDRKFVLVGDSGEHD 290 (373)
T ss_pred CCeEEecC--ChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccc-cccchhhhcccHHHHHHHhCCCceEEEecCCCCcC
Confidence 45555532 2233455566666665544333333333322111 111223333345556777778889999999854
Q ss_pred HHHHHHHHHhCccccceEEEEcccc
Q 027952 102 AAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 102 g~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
=.+=...+..+|++|.++-+=+.++
T Consensus 291 peIYae~v~~fP~RIl~I~IRdvs~ 315 (373)
T COG4850 291 PEIYAEMVRCFPNRILGIYIRDVSG 315 (373)
T ss_pred HHHHHHHHHhCccceeeEeeeeccC
Confidence 2344455668999999988877664
No 340
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.03 E-value=1.3e+02 Score=21.60 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=29.4
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHH
Q 027952 51 LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAA 103 (216)
Q Consensus 51 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 103 (216)
-.+++.|-+|- ..+-+++++.+.+....-..+-.+++|-+.|=.
T Consensus 68 ~~~i~LDe~Gk---------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 68 ARVIALDERGK---------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLS 111 (157)
T ss_pred CEEEEEcCCCC---------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccC
Confidence 46888998763 356677888877764443335678888777633
No 341
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.64 E-value=86 Score=24.17 Aligned_cols=21 Identities=29% Similarity=0.249 Sum_probs=18.8
Q ss_pred eEEEeeChhHHHHHHHHHhCc
Q 027952 93 MILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
-.+.|-|.|+.++..+|...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999999999764
No 342
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=31.45 E-value=1.8e+02 Score=22.50 Aligned_cols=79 Identities=22% Similarity=0.186 Sum_probs=46.9
Q ss_pred hhHHHhCCCeEEEEcCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChhHH----HHHHHHHhCcccc
Q 027952 43 YPLLEEAGLETWAVDILGWGFSDLER-LPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLGAA----VAVDFAVNHPEAV 116 (216)
Q Consensus 43 ~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~----~a~~~a~~~~~~~ 116 (216)
++.|++.+..++..|.-|-.+.-..- ..+.+.+++.+.+..+-+.. ..-+=+++|.+.|+. -|+....+++ .
T Consensus 103 ~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~--~ 180 (275)
T COG1856 103 LEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE--P 180 (275)
T ss_pred HHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC--C
Confidence 45666667788888886532211100 12345666666655554443 334567899999975 5667777665 4
Q ss_pred ceEEEEc
Q 027952 117 ENLVFID 123 (216)
Q Consensus 117 ~~lvli~ 123 (216)
+.+||..
T Consensus 181 DalVl~v 187 (275)
T COG1856 181 DALVLVV 187 (275)
T ss_pred CeEEEEE
Confidence 5666654
No 343
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=31.43 E-value=2.9e+02 Score=22.57 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=48.3
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCe---EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLE---TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
..+.||++--|+ .+...|...++.+.+.|.. ++.... ..+.+.+....++. .+..+-+.. .-++.+-+
T Consensus 131 ~~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC---~s~YP~~~~~~nL~----~I~~Lk~~f-~~pVG~Sd 201 (329)
T TIGR03569 131 RFGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHC---TTEYPAPFEDVNLN----AMDTLKEAF-DLPVGYSD 201 (329)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEE---CCCCCCCcccCCHH----HHHHHHHHh-CCCEEECC
Confidence 356789999999 5888999999999888764 555442 11111111222222 233333333 35788899
Q ss_pred eChhHHHHHHHHH
Q 027952 98 PSLGAAVAVDFAV 110 (216)
Q Consensus 98 ~S~Gg~~a~~~a~ 110 (216)
|+.|-.++....+
T Consensus 202 Ht~G~~~~~aAva 214 (329)
T TIGR03569 202 HTLGIEAPIAAVA 214 (329)
T ss_pred CCccHHHHHHHHH
Confidence 9999665544443
No 344
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=31.22 E-value=89 Score=20.92 Aligned_cols=32 Identities=16% Similarity=0.372 Sum_probs=24.8
Q ss_pred CeEEEe-eChhHHHHHHHHHhCccccceEEEEcc
Q 027952 92 PMILVG-PSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 92 ~~~l~G-~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
++.|+| .++.|.-.+++..+||+ ++-+.+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 467899 99999999999999886 565555554
No 345
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=31.18 E-value=2.3e+02 Score=21.25 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=50.0
Q ss_pred CCCCcEEEEcCCCCCcchH-HhhhhHHHhC-CCeEEEEcCCCCCCCCCC------C---CCCCChhhHHHHH-----HHH
Q 027952 21 SKTSPVVLLHGFDSSCLEW-RCTYPLLEEA-GLETWAVDILGWGFSDLE------R---LPPCNVTSKREHF-----YQL 84 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~-~~~~~~l~~~-g~~v~~~d~~g~G~s~~~------~---~~~~~~~~~~~~~-----~~~ 84 (216)
+.++.|++++--....+.+ ..+.+.|.+. |+.+...+... ..+.. + ...-+.....+.+ .+.
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 3567788888766655443 4567788888 88888887643 11100 0 0111233333322 233
Q ss_pred HHHhcCCCeEEEeeChhHHHHHHH
Q 027952 85 WKTYIKRPMILVGPSLGAAVAVDF 108 (216)
Q Consensus 85 ~~~~~~~~~~l~G~S~Gg~~a~~~ 108 (216)
++....+...++|.|.|+++....
T Consensus 107 l~~~~~~g~~i~G~SAGa~i~~~~ 130 (212)
T cd03146 107 LKAALERGVVYIGWSAGSNCWFPS 130 (212)
T ss_pred HHHHHHCCCEEEEECHhHHhhCCC
Confidence 333323447899999999988773
No 346
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=31.00 E-value=2.5e+02 Score=21.59 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=21.8
Q ss_pred CCCcEEEEcCCCCCcch-HHhhhhHHHhCCC-eEEEEcCCC
Q 027952 22 KTSPVVLLHGFDSSCLE-WRCTYPLLEEAGL-ETWAVDILG 60 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~-~~~~~~~l~~~g~-~v~~~d~~g 60 (216)
+...|++.||...++.. |..+-.-|.++|| .|+....-|
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~ 177 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG 177 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 44566777887766554 3334445556666 455554433
No 347
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=30.89 E-value=49 Score=18.05 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=23.5
Q ss_pred hCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHH
Q 027952 48 EAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKT 87 (216)
Q Consensus 48 ~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 87 (216)
+.+|.+..+|+||+- ....+.++..+.+.+.+..
T Consensus 11 ~~~y~~~~pdlpg~~------t~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCF------TQGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCE------EEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChh------hcCCCHHHHHHHHHHHHHH
Confidence 346899999999874 1345677777777666654
No 348
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=30.83 E-value=62 Score=23.32 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=27.4
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEE
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAV 56 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~ 56 (216)
...+.|+++-|-|-+...=-..++.|.++|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 456788888888877766667899999999998883
No 349
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=30.50 E-value=99 Score=21.84 Aligned_cols=19 Identities=37% Similarity=0.254 Sum_probs=17.0
Q ss_pred CCeEEEeeChhHHHHHHHH
Q 027952 91 RPMILVGPSLGAAVAVDFA 109 (216)
Q Consensus 91 ~~~~l~G~S~Gg~~a~~~a 109 (216)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5568999999999999998
No 350
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=30.38 E-value=2.4e+02 Score=22.44 Aligned_cols=50 Identities=14% Similarity=0.333 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHh-Ccc---ccceEEEEcccc
Q 027952 74 VTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVN-HPE---AVENLVFIDASV 126 (216)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~~~---~~~~lvli~~~~ 126 (216)
-++.++.+.+.+++.. +++.|+ +.|.+.-+..|.+ +|+ +++.++++++..
T Consensus 98 ~~~a~~~i~~~~~~~~-~evtiv--a~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 151 (302)
T cd02651 98 DIHAVDAIIDTLRASP-EPITLV--ATGPLTNIALLLRKYPELAERIKEIVLMGGAL 151 (302)
T ss_pred CCcHHHHHHHHHHhCC-CCEEEE--EcCchHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 3456667777776654 368888 6776666655553 564 789999998765
No 351
>PRK10867 signal recognition particle protein; Provisional
Probab=30.33 E-value=3.5e+02 Score=23.11 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=39.3
Q ss_pred hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCcc--ccceE
Q 027952 42 TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPE--AVENL 119 (216)
Q Consensus 42 ~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~l 119 (216)
..+.....+|+++.+|.+|.... -+...+.+..+.+......++++--++-|.-+...|..+.+ .+.++
T Consensus 175 a~~~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~gi 245 (433)
T PRK10867 175 ALEEAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGV 245 (433)
T ss_pred HHHHHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEE
Confidence 33444556799999999986322 12233444444444444555666656555555555554332 24566
Q ss_pred EE
Q 027952 120 VF 121 (216)
Q Consensus 120 vl 121 (216)
|+
T Consensus 246 Il 247 (433)
T PRK10867 246 IL 247 (433)
T ss_pred EE
Confidence 66
No 352
>PRK13938 phosphoheptose isomerase; Provisional
Probab=29.98 E-value=1.6e+02 Score=21.89 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=22.3
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
...+++++|.+-.+.+|..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5678999999999999999998764
No 353
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=29.92 E-value=35 Score=23.20 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=24.9
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCC
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 60 (216)
++...|..|+-.-.-.+.+.|.++|++|...-.++
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 44556666777777789999999999998655443
No 354
>PRK04148 hypothetical protein; Provisional
Probab=29.87 E-value=1e+02 Score=21.51 Aligned_cols=45 Identities=13% Similarity=0.160 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcc
Q 027952 76 SKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDA 124 (216)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~ 124 (216)
+.++.+.+.+......++..+|-..|..+|..++..- .-++.++-
T Consensus 3 ~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 3 TIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred HHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 4445544444333345699999998888888887532 24666664
No 355
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=29.52 E-value=1.5e+02 Score=23.69 Aligned_cols=37 Identities=14% Similarity=0.057 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHh-cCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 77 KREHFYQLWKTY-IKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
..+.+..+.+.+ ...+++++|.+..|.++...|...+
T Consensus 48 I~~av~~~~~~l~~ggrI~~~GaGtSg~la~~da~e~~ 85 (299)
T PRK05441 48 IAAAVDAAAAALRQGGRLIYIGAGTSGRLGVLDASECP 85 (299)
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhCc
Confidence 334444444444 5678999999999999976666543
No 356
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=29.34 E-value=1.4e+02 Score=23.45 Aligned_cols=38 Identities=26% Similarity=0.297 Sum_probs=24.5
Q ss_pred cEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCC
Q 027952 25 PVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWG 62 (216)
Q Consensus 25 ~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G 62 (216)
|+|++-|+.++... ...+.+.|.+.++.|..++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 68899999999875 356778888888999888855544
No 357
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.95 E-value=3.3e+02 Score=22.40 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=57.1
Q ss_pred CCCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 21 SKTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
.++|.++++-|.+|... ....++..|.+.|+.|+..- |++ + -....+.+..+-+++ .+-++.+
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA----~DT----F----RAaAiEQL~~w~er~---gv~vI~~ 200 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA----GDT----F----RAAAIEQLEVWGERL---GVPVISG 200 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe----cch----H----HHHHHHHHHHHHHHh---CCeEEcc
Confidence 35689999999998886 46789999999999998763 211 1 112333333333333 3556665
Q ss_pred ChhHH---HHHHHHHhCccccceEEEEccccccCCC
Q 027952 99 SLGAA---VAVDFAVNHPEAVENLVFIDASVYAEGT 131 (216)
Q Consensus 99 S~Gg~---~a~~~a~~~~~~~~~lvli~~~~~~~~~ 131 (216)
..|+- ++.....+-..+=--+|+++.+++....
T Consensus 201 ~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk 236 (340)
T COG0552 201 KEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNK 236 (340)
T ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCc
Confidence 57743 3333222211222348899999876543
No 358
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=28.70 E-value=3.1e+02 Score=22.00 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=46.2
Q ss_pred cCCCCCcchHHhhhhHHHhCCCeEEEE-cCCC---CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEee
Q 027952 30 HGFDSSCLEWRCTYPLLEEAGLETWAV-DILG---WGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGP 98 (216)
Q Consensus 30 hG~~~~~~~~~~~~~~l~~~g~~v~~~-d~~g---~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 98 (216)
.|+| +.....+.++.+.+.|..-+.+ |..+ ||.... ....+.+++++-+....+.....++.|++-
T Consensus 87 ~GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~--~~lv~~ee~~~kI~Aa~~a~~~~d~~IiAR 156 (292)
T PRK11320 87 TGFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPN--KEIVSQEEMVDRIKAAVDARTDPDFVIMAR 156 (292)
T ss_pred CCCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCC--CcccCHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 4777 6667778899999999888887 5431 232221 135688999999998888775556777665
No 359
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=28.52 E-value=2.8e+02 Score=21.52 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=46.8
Q ss_pred CCCCCcEEEEcCCCCCcch-HHhhhhHHHhCCCe-EEEEcCCCCCCCCCCC------------CCCCChhhHHH-----H
Q 027952 20 PSKTSPVVLLHGFDSSCLE-WRCTYPLLEEAGLE-TWAVDILGWGFSDLER------------LPPCNVTSKRE-----H 80 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~-~~~~~~~l~~~g~~-v~~~d~~g~G~s~~~~------------~~~~~~~~~~~-----~ 80 (216)
++..+.|++++--.+.... .+.+.+.|.+.|+. +-..+.+.-.....+. ...-+...+.+ .
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~ 104 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTP 104 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCc
Confidence 4455778888865554433 45667778888874 5556654211111000 00011112221 1
Q ss_pred HHHHHHHhcCCCeEEEeeChhHHHHHHHHH
Q 027952 81 FYQLWKTYIKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 81 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
+.+.++..-..-..++|.|.|+++......
T Consensus 105 l~~~l~~~~~~G~vi~G~SAGA~i~~~~~~ 134 (250)
T TIGR02069 105 LLDRLRKRVHEGIILGGTSAGAAVMSDTMI 134 (250)
T ss_pred HHHHHHHHHHcCCeEEEccHHHHhcccceE
Confidence 223333222223799999999998755543
No 360
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.48 E-value=53 Score=26.91 Aligned_cols=20 Identities=25% Similarity=0.296 Sum_probs=17.4
Q ss_pred eEEEeeChhHHHHHHHHHhC
Q 027952 93 MILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~ 112 (216)
=.+.|.|.||.+|..++..+
T Consensus 43 DlIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 43 DFVGGTSTGSIIAACIALGM 62 (344)
T ss_pred cEEEEecHHHHHHHHHHcCC
Confidence 48999999999999998753
No 361
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=28.47 E-value=1.4e+02 Score=25.06 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=36.7
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCC
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s 64 (216)
...++|-+-=+|-+-.......+.|.+.||.|+.+.--|.|.-
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 5567888888887778888999999999999999999998743
No 362
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.41 E-value=52 Score=26.04 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=17.9
Q ss_pred eEEEeeChhHHHHHHHHHhC
Q 027952 93 MILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~~ 112 (216)
=.++|.|.||.+|+.++..+
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 48999999999999998764
No 363
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=28.05 E-value=30 Score=26.48 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=28.1
Q ss_pred CCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcCC
Q 027952 23 TSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDIL 59 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 59 (216)
.|+||++.|+.++.. ....+.+.|..+|++|.++..|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 468999999998875 4567888888889999999765
No 364
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=27.88 E-value=4.4e+02 Score=23.49 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=47.7
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCCCCCCC---CCCChhhHHHHHHHHHHHh-----cCCCeE---
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFSDLERL---PPCNVTSKREHFYQLWKTY-----IKRPMI--- 94 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~--- 94 (216)
-+++-|..++...-..+.+.+.+.|+.+-.+-.|..=+.+.... ....++..++.+.+.+..+ ...+.+
T Consensus 193 ~LViIGGddS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~~da~S~~k~~~~V 272 (568)
T PLN02251 193 GLVVIGGDDSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFV 272 (568)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCEEEEE
Confidence 34444555555555567788888887666665555433333221 2346677777776666655 222333
Q ss_pred -EEeeChhHHHHHHHHHh-Ccc
Q 027952 95 -LVGPSLGAAVAVDFAVN-HPE 114 (216)
Q Consensus 95 -l~G~S~Gg~~a~~~a~~-~~~ 114 (216)
++|.+. |.+|+..|.. +|+
T Consensus 273 evMGR~a-G~LAL~~aLat~pn 293 (568)
T PLN02251 273 RLMGRAA-SHITLECALQTHPN 293 (568)
T ss_pred EeCCCch-HHHHHHHHHhhCCC
Confidence 444444 4555655553 443
No 365
>PRK07053 glutamine amidotransferase; Provisional
Probab=27.74 E-value=2.8e+02 Score=21.23 Aligned_cols=83 Identities=14% Similarity=-0.005 Sum_probs=44.0
Q ss_pred CcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCC---CCC----------CCCCCCh--hhHHHHHHHHHHHh
Q 027952 24 SPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS---DLE----------RLPPCNV--TSKREHFYQLWKTY 88 (216)
Q Consensus 24 ~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s---~~~----------~~~~~~~--~~~~~~~~~~~~~~ 88 (216)
+.+|+-|--..+... +.+.|.+.|+.+...+.. .++. +.. ....++- ..+...+.++++..
T Consensus 4 ~ilviqh~~~e~~g~---i~~~L~~~g~~~~v~~~~-~~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~~ 79 (234)
T PRK07053 4 TAVAIRHVAFEDLGS---FEQVLGARGYRVRYVDVG-VDDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQR 79 (234)
T ss_pred eEEEEECCCCCCChH---HHHHHHHCCCeEEEEecC-CCccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHHH
Confidence 456777776666554 455666666655444321 0100 000 0111111 23445555666655
Q ss_pred cCCCeEEEeeChhHHHHHHHHH
Q 027952 89 IKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
....+-++|.|+|..+......
T Consensus 80 ~~~~~PvlGIC~G~Qlla~alG 101 (234)
T PRK07053 80 LAAGLPTLGICLGAQLIARALG 101 (234)
T ss_pred HHCCCCEEEECccHHHHHHHcC
Confidence 3334569999999998877763
No 366
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=27.58 E-value=3.3e+02 Score=22.06 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=42.6
Q ss_pred hhHHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh-hHHHHHHHHHhC
Q 027952 43 YPLLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL-GAAVAVDFAVNH 112 (216)
Q Consensus 43 ~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~-Gg~~a~~~a~~~ 112 (216)
.+.+...|. .|+..|.+. ..|+.+.+++.+.+++++.....++|+++|. |--++.++|++.
T Consensus 41 ~~~~~~~Gad~V~~~~~~~---------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 41 GAQAIQLGANHVWKLSGKP---------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHHhcCCCEEEEecCcc---------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 355655665 577777542 2278899999999998886553467777765 666888888874
No 367
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.02 E-value=3.1e+02 Score=21.45 Aligned_cols=41 Identities=15% Similarity=0.237 Sum_probs=33.0
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCC
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGW 61 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 61 (216)
..+.||++--|...+.+.|...++.+.+.|-.=+.+=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 45789999999999999999999999988875445545565
No 368
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=26.90 E-value=3.3e+02 Score=21.72 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=30.6
Q ss_pred hhhhHHHhCCCe--EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHh-cCCCeEEEeeChhHHHH
Q 027952 41 CTYPLLEEAGLE--TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTY-IKRPMILVGPSLGAAVA 105 (216)
Q Consensus 41 ~~~~~l~~~g~~--v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a 105 (216)
...+.+.+.|.. -+.+|. |+|-+. +.++..+.+.. ++.+ ......++|+|-=.++.
T Consensus 167 ~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~n~~ll~~-l~~l~~lg~Pilvg~SRKsfig 225 (282)
T PRK11613 167 EQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSHNYQLLAR-LAEFHHFNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHHHHHHHHH-HHHHHhCCCCEEEEecccHHHH
Confidence 344556677875 667775 665432 23333333322 2333 34556899999666554
No 369
>PRK07877 hypothetical protein; Provisional
Probab=26.80 E-value=1.3e+02 Score=27.56 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=30.0
Q ss_pred HHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 86 KTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 86 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
+.+...++.|+|-+.|+.++..+|..-- +..+++++.-.
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~LaraGv--vG~l~lvD~D~ 141 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAEGL--CGELRLADFDT 141 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHccC--CCeEEEEcCCE
Confidence 4446778999999999999988886321 37899999855
No 370
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=26.74 E-value=1.4e+02 Score=19.45 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=23.8
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhC-CCeEEEEcC
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEA-GLETWAVDI 58 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 58 (216)
+|++.|..|+...- +++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecc
Confidence 57888888888753 56777765 899888887
No 371
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.65 E-value=3.7e+02 Score=22.26 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=44.9
Q ss_pred CCCCcEEEEcCCCCCcchHHhhhhHHHhCCCe-EEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEE-Eee
Q 027952 21 SKTSPVVLLHGFDSSCLEWRCTYPLLEEAGLE-TWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMIL-VGP 98 (216)
Q Consensus 21 ~~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~G~ 98 (216)
..+.||++--|+..+.+.|...++.+.+.|-. ++.. .||. |..+.....+. ....+. .+++.-.-++.+ ..|
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~-erg~--s~yp~~~~~~l--dl~~i~-~lk~~~~~PV~~d~~H 296 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILC-ERGI--RTYEKATRNTL--DISAVP-ILKQETHLPVMVDVTH 296 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCcc--CCCCCCCCCCc--CHHHHH-HHHHHhCCCEEEeCCC
Confidence 45779999999999999999999999888764 4444 3443 33221111112 112222 223322345666 689
Q ss_pred Chh
Q 027952 99 SLG 101 (216)
Q Consensus 99 S~G 101 (216)
|.|
T Consensus 297 s~G 299 (360)
T PRK12595 297 STG 299 (360)
T ss_pred CCc
Confidence 987
No 372
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=26.33 E-value=53 Score=26.24 Aligned_cols=18 Identities=28% Similarity=0.327 Sum_probs=16.1
Q ss_pred eEEEeeChhHHHHHHHHH
Q 027952 93 MILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~ 110 (216)
=.++|-|.||.+|+.++.
T Consensus 43 Dli~GTStGgiiA~~la~ 60 (308)
T cd07211 43 DYICGVSTGAILAFLLGL 60 (308)
T ss_pred CEEEecChhHHHHHHHhc
Confidence 369999999999999986
No 373
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=26.26 E-value=1.4e+02 Score=18.15 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=21.9
Q ss_pred HhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 027952 47 EEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWK 86 (216)
Q Consensus 47 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 86 (216)
.+.+|.+..+|++||- ....+.++..+.+...++
T Consensus 12 ~dg~y~~~~Pdlpgc~------s~G~T~eea~~n~~eai~ 45 (73)
T COG1598 12 EDGGYVASVPDLPGCH------SQGETLEEALQNAKEAIE 45 (73)
T ss_pred CCCCEEEEeCCCCCcc------ccCCCHHHHHHHHHHHHH
Confidence 4557999999999983 133455555555554443
No 374
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=25.39 E-value=3.6e+02 Score=21.66 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=26.6
Q ss_pred EEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCC
Q 027952 26 VVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 26 lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 60 (216)
++...|.+|+-..+..+++.|.+.|+.|..+-..+
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 44446787777777789999999999988775543
No 375
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=25.22 E-value=1.4e+02 Score=20.75 Aligned_cols=41 Identities=22% Similarity=0.173 Sum_probs=26.9
Q ss_pred cEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCCC
Q 027952 25 PVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFSD 65 (216)
Q Consensus 25 ~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~ 65 (216)
++|.+-|...+... -+.+++.|.++||++.++=.-+||..+
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 46777787766654 467899999999998866655666554
No 376
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=25.12 E-value=2.4e+02 Score=24.25 Aligned_cols=74 Identities=9% Similarity=-0.030 Sum_probs=44.8
Q ss_pred CCcEEEEcCCCCCc----chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC----CCCCChhhHHHHHHHHHHHhcCCCeE
Q 027952 23 TSPVVLLHGFDSSC----LEWRCTYPLLEEAGLETWAVDILGWGFSDLER----LPPCNVTSKREHFYQLWKTYIKRPMI 94 (216)
Q Consensus 23 ~~~lv~~hG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (216)
..-|++++|+|.-- +..+.+.+.|.++|.+|-.--+|--|+=+..= -+..-..|...++++.-+.....++.
T Consensus 306 A~~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~F~~tDva 385 (462)
T PRK09444 306 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTV 385 (462)
T ss_pred CCcEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCCHHHHHhHHhhccccccCCEE
Confidence 46899999999533 34567889999999998877777666554321 11122334444555544444444444
Q ss_pred EE
Q 027952 95 LV 96 (216)
Q Consensus 95 l~ 96 (216)
|+
T Consensus 386 lV 387 (462)
T PRK09444 386 LV 387 (462)
T ss_pred EE
Confidence 44
No 377
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.09 E-value=1.1e+02 Score=23.54 Aligned_cols=18 Identities=28% Similarity=0.307 Sum_probs=16.4
Q ss_pred eEEEeeChhHHHHHHHHH
Q 027952 93 MILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~ 110 (216)
-.+.|-|+|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 489999999999999984
No 378
>PRK06849 hypothetical protein; Provisional
Probab=24.84 E-value=2.1e+02 Score=23.60 Aligned_cols=59 Identities=12% Similarity=0.077 Sum_probs=38.1
Q ss_pred HhhhhHHHhCCCeEEEEcCCCCCCCCC---CC------CCCCChhhHHHHHHHHHHHhcCCCeEEEeeC
Q 027952 40 RCTYPLLEEAGLETWAVDILGWGFSDL---ER------LPPCNVTSKREHFYQLWKTYIKRPMILVGPS 99 (216)
Q Consensus 40 ~~~~~~l~~~g~~v~~~d~~g~G~s~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 99 (216)
..+++.|.+.|++|++.|......+.. .+ .+..+.+++.+.+.+++++.+. .+++-+.+
T Consensus 18 l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i-d~vIP~~e 85 (389)
T PRK06849 18 LELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI-DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC-CEEEECCh
Confidence 467899999999999998875332210 00 1234556788888888887654 35555544
No 379
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=24.60 E-value=2.4e+02 Score=19.37 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=19.9
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
...+++++|..-.+.++.+++.+..
T Consensus 34 ~gg~i~~~G~G~S~~~a~~~~~~~~ 58 (138)
T PF13580_consen 34 NGGRIFVCGNGHSAAIASHFAADLG 58 (138)
T ss_dssp TT--EEEEESTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCchhhhHHHHHHHHHh
Confidence 5778999999999999999988754
No 380
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=24.47 E-value=1.7e+02 Score=23.62 Aligned_cols=44 Identities=14% Similarity=0.181 Sum_probs=34.8
Q ss_pred CCCChhhHHHHHHHHHHHh-----cCCCeEEEeeChhHHHHHHHHHhCc
Q 027952 70 PPCNVTSKREHFYQLWKTY-----IKRPMILVGPSLGAAVAVDFAVNHP 113 (216)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~~ 113 (216)
.++.++..+..-.+..++. ++.++.++|.|-|=.+|.+.++-+.
T Consensus 16 HP~GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 16 HPYGCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred CCccHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 5677887777666666665 4568999999999889999988775
No 381
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=23.96 E-value=1.5e+02 Score=26.89 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=27.0
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEe
Q 027952 51 LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVG 97 (216)
Q Consensus 51 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 97 (216)
+..-.+..||||++. +++++.+..+.+...++..-++.++|
T Consensus 630 ~kte~isCPgCGRT~------~dlq~~~~~I~~~~~hl~GvkiavMG 670 (733)
T PLN02925 630 TKTEYVSCPSCGRTL------FDLQEVSAEIREKTSHLPGVSIAIMG 670 (733)
T ss_pred cCCeEEECCCCCCcc------ccHHHHHHHHHHHhhcCCCceEEEEe
Confidence 445567788888662 45778888877776666444555554
No 382
>PRK07933 thymidylate kinase; Validated
Probab=23.72 E-value=2e+02 Score=21.59 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=30.0
Q ss_pred EEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCCCCCC
Q 027952 26 VVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILGWGFS 64 (216)
Q Consensus 26 lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s 64 (216)
+|.+=|.-|+... -..+.+.|.+.|+.|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4566677766653 56788999999999999999977644
No 383
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=23.68 E-value=3.4e+02 Score=20.72 Aligned_cols=34 Identities=24% Similarity=0.131 Sum_probs=23.7
Q ss_pred cEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCC
Q 027952 25 PVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 25 ~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 60 (216)
.+..+-|. ++.--+.++..|+++|+++...|+..
T Consensus 15 k~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 15 KVAAVTGG--SSGIGRAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred ceeEEecC--CchHHHHHHHHHHhcCcEEEEeecch
Confidence 34444443 33344678999999999999998764
No 384
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=23.57 E-value=1e+02 Score=23.27 Aligned_cols=17 Identities=29% Similarity=0.376 Sum_probs=13.2
Q ss_pred hhHHHhCCCeEEEEcCC
Q 027952 43 YPLLEEAGLETWAVDIL 59 (216)
Q Consensus 43 ~~~l~~~g~~v~~~d~~ 59 (216)
+..|+++|+.|+++|.-
T Consensus 52 a~~LA~~G~~V~avD~s 68 (218)
T PRK13255 52 MLWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHHhCCCeEEEEccC
Confidence 34567789999999963
No 385
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=23.51 E-value=1.2e+02 Score=23.53 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCC
Q 027952 23 TSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 23 ~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 60 (216)
+..+|=+|+.......|..+++.|.+.||+++..+.-.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~N~ 229 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEPNP 229 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecCCh
Confidence 67889999987777778889999999999998877544
No 386
>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.
Probab=23.45 E-value=2.9e+02 Score=23.55 Aligned_cols=64 Identities=9% Similarity=-0.012 Sum_probs=48.2
Q ss_pred cEEEEcCCCCCc--chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHh
Q 027952 25 PVVLLHGFDSSC--LEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 25 ~lv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~ 88 (216)
-|.+|.-+|.+. +..-++++...+.|+.|+-.--|-||.+.... ..-..++++.+.+..+++-.
T Consensus 310 RlTLI~RmGa~kV~~~LP~li~aV~~~G~~VvW~cDPMHGNT~~t~~G~KTR~f~~Il~Ev~~ff~vh 377 (443)
T TIGR01358 310 RLTLISRMGADKIADKLPPLLRAVKAAGRRVVWVCDPMHGNTEEAASGYKTRRFDDIRSEVKGFFEVH 377 (443)
T ss_pred eEEEEeccCchHHHHhHHHHHHHHHHcCCceEEeecCCCCCceeCCCCccCCcHHHHHHHHHHHHHHH
Confidence 356666666443 45677999999999999988889999875532 34457899999999888765
No 387
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=23.13 E-value=1.8e+02 Score=22.38 Aligned_cols=38 Identities=8% Similarity=0.179 Sum_probs=24.7
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC--ccccceEEEEcccc
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH--PEAVENLVFIDASV 126 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~--~~~~~~lvli~~~~ 126 (216)
...++.+.||.||=.-...|+..- --.|+.+|-+++.+
T Consensus 54 KGk~iSvmg~GmGipS~sIY~~ELi~~y~Vk~iIRvGt~G 93 (236)
T COG0813 54 KGKKISVMGHGMGIPSISIYSRELITDYGVKKIIRVGTCG 93 (236)
T ss_pred cCcEEEEEEecCCCccHHHHHHHHHHHhCcceEEEEEccc
Confidence 567799999999955444443321 11378888888765
No 388
>PRK08105 flavodoxin; Provisional
Probab=23.08 E-value=1.9e+02 Score=20.29 Aligned_cols=15 Identities=7% Similarity=-0.111 Sum_probs=7.0
Q ss_pred CCcchHHhhhhHHHh
Q 027952 34 SSCLEWRCTYPLLEE 48 (216)
Q Consensus 34 ~~~~~~~~~~~~l~~ 48 (216)
...+.+..+.+.|.+
T Consensus 63 e~p~~~~~f~~~l~~ 77 (149)
T PRK08105 63 DLPDSIVPLFQALKD 77 (149)
T ss_pred CCChhHHHHHHHHHh
Confidence 334445555554443
No 389
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=22.95 E-value=71 Score=27.20 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=14.3
Q ss_pred CCCCCCcEEEEcCCCCCc
Q 027952 19 KPSKTSPVVLLHGFDSSC 36 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~~~~ 36 (216)
.+++..|||+++|++|+.
T Consensus 15 ~~~~~~PViLvPG~~gS~ 32 (440)
T PLN02733 15 VDPDLDPVLLVPGIGGSI 32 (440)
T ss_pred CCCCCCcEEEeCCCCcce
Confidence 455689999999998654
No 390
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=22.91 E-value=93 Score=27.10 Aligned_cols=57 Identities=18% Similarity=0.246 Sum_probs=34.6
Q ss_pred hHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCe-----EEEeeChhHHHHHHHHHhC
Q 027952 44 PLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPM-----ILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 44 ~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~G~S~Gg~~a~~~a~~~ 112 (216)
++...+|.+++.+|-=|. ... .+-.+..-++.+...++ .|+|.|.||.+|+.+..++
T Consensus 410 ~~vkg~G~rILSiDGGGt---rG~---------~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 410 RQVKGQGLRILSIDGGGT---RGL---------ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred cccCCCceEEEEecCCCc---cch---------hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 344667888998885332 111 11122222344434443 5899999999999998875
No 391
>PRK02399 hypothetical protein; Provisional
Probab=22.45 E-value=2.1e+02 Score=24.13 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=34.8
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHHHhCCCeEEEEcCCCCCCC
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLLEEAGLETWAVDILGWGFS 64 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s 64 (216)
...++|-+-=+|-+-.....+.+.|.+.||.|+.+.--|.|.-
T Consensus 184 ~~kp~Ig~TmfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 184 DDKPLIGLTMFGVTTPCVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCCceEEEecCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 3466666666676667788899999999999999999998753
No 392
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=22.36 E-value=4.1e+02 Score=22.25 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=46.5
Q ss_pred CCCcEEEEcCCCCCc----chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC----CCCCChhhHHHHHHHHHHHhcCCCe
Q 027952 22 KTSPVVLLHGFDSSC----LEWRCTYPLLEEAGLETWAVDILGWGFSDLER----LPPCNVTSKREHFYQLWKTYIKRPM 93 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (216)
+...+++++|+|..- ...+.+.+.|.++|..|-.--+|--|+-+..- -+..-.-|.+-++++.-+.....++
T Consensus 307 nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~VrfaIHPVAGRmPGHMNVLLAEA~VpYd~v~emddIN~dF~~tDV 386 (463)
T COG1282 307 NASSVIIVPGYGMAVAQAQHPVAEITEKLRARGVNVRFAIHPVAGRMPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDV 386 (463)
T ss_pred CCCeEEEecCchHHHHhhhhHHHHHHHHHHhcCCeeeEeecccccCCCcchhhhhhhccCCHHHHhhHHhhcchhccccE
Confidence 456799999999543 33567888999999888777777666544320 1222333455556666555555555
Q ss_pred EEE
Q 027952 94 ILV 96 (216)
Q Consensus 94 ~l~ 96 (216)
.++
T Consensus 387 vlV 389 (463)
T COG1282 387 VLV 389 (463)
T ss_pred EEE
Confidence 554
No 393
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=22.07 E-value=1.5e+02 Score=23.88 Aligned_cols=39 Identities=10% Similarity=0.160 Sum_probs=28.5
Q ss_pred CCCCCcEEEEcCCCCCcc--hHHhhhhHHHhCCCeEEEEcC
Q 027952 20 PSKTSPVVLLHGFDSSCL--EWRCTYPLLEEAGLETWAVDI 58 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~ 58 (216)
..++|.++++-|+.|+.. +.+++..++.+.....|.+++
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 346788999999998886 467788888777555555554
No 394
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=22.03 E-value=1.9e+02 Score=24.32 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=33.0
Q ss_pred hhhHHHhCC--CeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChh
Q 027952 42 TYPLLEEAG--LETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLG 101 (216)
Q Consensus 42 ~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 101 (216)
+++.+.++| |++|.+|.|.++.|.... ..-..++..-+...++-+...-+.++-.|..
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~--~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~ 339 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE--FSAQRDYKDLNDLALRLLAPGGTLVTSSCSR 339 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc--hhHHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 344555532 999999999999886542 2233444444444444444443444444433
No 395
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=21.98 E-value=1.1e+02 Score=23.06 Aligned_cols=16 Identities=25% Similarity=0.435 Sum_probs=13.1
Q ss_pred hhHHHhCCCeEEEEcC
Q 027952 43 YPLLEEAGLETWAVDI 58 (216)
Q Consensus 43 ~~~l~~~g~~v~~~d~ 58 (216)
+..|+++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 4557789999999996
No 396
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.96 E-value=99 Score=21.07 Aligned_cols=24 Identities=25% Similarity=0.151 Sum_probs=19.9
Q ss_pred hHHhhhhHHHhCCCeEEEEcCCCC
Q 027952 38 EWRCTYPLLEEAGLETWAVDILGW 61 (216)
Q Consensus 38 ~~~~~~~~l~~~g~~v~~~d~~g~ 61 (216)
.+-.+++.|+++|+++++.|.--+
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~~~ 47 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDINEK 47 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecccc
Confidence 456789999999999999997543
No 397
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=21.91 E-value=2.9e+02 Score=19.37 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=42.1
Q ss_pred HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCC-CeEEEeeChhHHHHHHHHHhCccccce
Q 027952 40 RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKR-PMILVGPSLGAAVAVDFAVNHPEAVEN 118 (216)
Q Consensus 40 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~~~~~ 118 (216)
..+.+.|.+.||.|+=+-.- + ....++.+++..+...+..-..+ -+.++|...|-.+ .|.++|. |.+
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~-----~---~~~~dy~~~a~~va~~V~~~~~d~GIliCgtGiG~~i---aANK~~G-IrA 82 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTY-----S---EDSVDYPDFAEKVAEAVASGEADRGILICGTGIGMSI---AANKVPG-IRA 82 (140)
T ss_dssp HHHHHHHHHTTEEEEEESES-----S---TST--HHHHHHHHHHHHHTTSSSEEEEEESSSHHHHH---HHHTSTT---E
T ss_pred HHHHHHHHHCCCEEEEeCCC-----C---CCCCCHHHHHHHHHHHHHcccCCeEEEEcCCChhhhh---HhhcCCC-EEE
Confidence 35778999999988766322 1 12456777777777776665333 3677777776554 3556765 555
Q ss_pred EEEEcc
Q 027952 119 LVFIDA 124 (216)
Q Consensus 119 lvli~~ 124 (216)
.+..++
T Consensus 83 a~~~d~ 88 (140)
T PF02502_consen 83 ALCSDP 88 (140)
T ss_dssp EE-SSH
T ss_pred EeeCCH
Confidence 555444
No 398
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=21.85 E-value=1.7e+02 Score=23.11 Aligned_cols=77 Identities=12% Similarity=0.187 Sum_probs=39.1
Q ss_pred hhhHHHhCCCeEEEEcCCCC-CCCCCCCCCCCChhhHHHHHHHHHHHh--cCCCeEEEeeChhHHHHH----HHHHhCcc
Q 027952 42 TYPLLEEAGLETWAVDILGW-GFSDLERLPPCNVTSKREHFYQLWKTY--IKRPMILVGPSLGAAVAV----DFAVNHPE 114 (216)
Q Consensus 42 ~~~~l~~~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~----~~a~~~~~ 114 (216)
.++.+.+.|-+++++..--. |.+... ....++++.++.+.++.+.. ..+.++++.| ||.++. .+..++-+
T Consensus 162 ~A~~M~~AGaDiiv~H~GlT~gG~~Ga-~~~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI~~p~D~~~~l~~t~ 238 (268)
T PF09370_consen 162 QARAMAEAGADIIVAHMGLTTGGSIGA-KTALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPIATPEDAQYVLRNTK 238 (268)
T ss_dssp HHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB-SHHHHHHHHHH-T
T ss_pred HHHHHHHcCCCEEEecCCccCCCCcCc-cccCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCCCCHHHHHHHHhcCC
Confidence 45677788899998876221 222222 24568888888888888776 3344677766 777653 33333333
Q ss_pred ccceEEE
Q 027952 115 AVENLVF 121 (216)
Q Consensus 115 ~~~~lvl 121 (216)
.+.+.+-
T Consensus 239 ~~~Gf~G 245 (268)
T PF09370_consen 239 GIHGFIG 245 (268)
T ss_dssp TEEEEEE
T ss_pred CCCEEec
Confidence 3555544
No 399
>PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase
Probab=21.85 E-value=3e+02 Score=23.73 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=48.2
Q ss_pred cEEEEcCCCCCc--chHHhhhhHHHhCCCeEEEEcCCCCCCCCCCC--CCCCChhhHHHHHHHHHHHh
Q 027952 25 PVVLLHGFDSSC--LEWRCTYPLLEEAGLETWAVDILGWGFSDLER--LPPCNVTSKREHFYQLWKTY 88 (216)
Q Consensus 25 ~lv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~ 88 (216)
-|.+|.-+|.+. +..-++++...+.|+.|+-.--|-||.+.... ..-..++++.+.+..+++-.
T Consensus 330 RlTLI~RmGa~kV~~~LP~Li~aV~~~G~~VvW~cDPMHGNT~~t~~G~KTR~f~~Il~Ev~~ff~vh 397 (474)
T PLN02291 330 RLTIIVRMGAEKLRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPSGLKTRPFDAIRAEVRAFFDVH 397 (474)
T ss_pred eEEEEeccchHHHHHHHHHHHHHHHHcCCceEEeecCCCCCceeCCCCccCCcHHHHHHHHHHHHHHH
Confidence 356666666443 45677999999999999988889999875532 34467899999999888765
No 400
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.80 E-value=1.7e+02 Score=22.56 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=17.2
Q ss_pred eEEEeeChhHHHHHHHHHh
Q 027952 93 MILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 93 ~~l~G~S~Gg~~a~~~a~~ 111 (216)
=.++|.|.||.+|..++..
T Consensus 36 d~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 36 DLIAGTSTGGIIALGLALG 54 (258)
T ss_pred ceeeeccHHHHHHHHHhcC
Confidence 4699999999999999886
No 401
>PRK05665 amidotransferase; Provisional
Probab=21.65 E-value=1.7e+02 Score=22.63 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHH
Q 027952 72 CNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFA 109 (216)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 109 (216)
++-..+...+.++++.......=++|.|+|..+.....
T Consensus 71 ~~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 71 FGTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 44556777777777776333455999999998776665
No 402
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.63 E-value=42 Score=28.91 Aligned_cols=45 Identities=27% Similarity=0.197 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceEEEEc
Q 027952 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENLVFID 123 (216)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~lvli~ 123 (216)
...+..++++ +.-|-+|.|-|+||.+|..++.+..+.++.+.--.
T Consensus 190 ~GVlrtL~e~-dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~~~ 234 (543)
T KOG2214|consen 190 IGVLRTLLEQ-DLLPNIISGSSAGAIVASLVGVRSNEELKQLLTNF 234 (543)
T ss_pred HHHHHHHHHc-cccchhhcCCchhHHHHHHHhhcchHHHHHHhccc
Confidence 3344444444 34456999999999999999998876666554433
No 403
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=21.25 E-value=2.4e+02 Score=20.77 Aligned_cols=18 Identities=17% Similarity=0.521 Sum_probs=7.2
Q ss_pred HhCccccceEEEEccccccC
Q 027952 110 VNHPEAVENLVFIDASVYAE 129 (216)
Q Consensus 110 ~~~~~~~~~lvli~~~~~~~ 129 (216)
..||+ .-++++++.....
T Consensus 89 ~~hP~--tPIllv~~~~~~~ 106 (178)
T PF14606_consen 89 EAHPD--TPILLVSPIPYPA 106 (178)
T ss_dssp TT-SS--S-EEEEE----TT
T ss_pred HhCCC--CCEEEEecCCccc
Confidence 34665 3677777766443
No 404
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=21.24 E-value=1.2e+02 Score=24.33 Aligned_cols=34 Identities=6% Similarity=-0.108 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHh
Q 027952 78 REHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVN 111 (216)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 111 (216)
-+.+.++++.......-++|.|+|+.+++++.--
T Consensus 121 W~El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 3335555555433356889999999998877654
No 405
>PLN02924 thymidylate kinase
Probab=21.03 E-value=2.7e+02 Score=21.13 Aligned_cols=42 Identities=14% Similarity=0.159 Sum_probs=32.5
Q ss_pred CCCCCCcEEEEcCCCCCcch--HHhhhhHHHhCCCeEEEEcCCC
Q 027952 19 KPSKTSPVVLLHGFDSSCLE--WRCTYPLLEEAGLETWAVDILG 60 (216)
Q Consensus 19 ~~~~~~~lv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g 60 (216)
.......+|.+=|..|+... ...+.+.|.+.|+.++....|+
T Consensus 11 ~~~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 11 SVESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CcCCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 33445678888899888763 5678899999999988877776
No 406
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.02 E-value=2.9e+02 Score=20.59 Aligned_cols=24 Identities=25% Similarity=0.249 Sum_probs=21.1
Q ss_pred cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 89 IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
...++.++|.+-.+.+|..++.+.
T Consensus 40 ~~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 40 NGNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred cCCEEEEEECcHHHHHHHHHHHHH
Confidence 567899999999999999999863
No 407
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional
Probab=20.97 E-value=4.6e+02 Score=21.28 Aligned_cols=61 Identities=16% Similarity=0.145 Sum_probs=41.9
Q ss_pred hhhHHHhCCC-eEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeCh-hHHHHHHHHHhC
Q 027952 42 TYPLLEEAGL-ETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSL-GAAVAVDFAVNH 112 (216)
Q Consensus 42 ~~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~-Gg~~a~~~a~~~ 112 (216)
..+.|...|- .|+..|.++ ..+..+.+++.+.++++..... ++|++++. |.-++.++|.+.
T Consensus 40 ~~~~l~~~Gad~V~~~~~~~---------~~~~~e~~~~al~~~i~~~~P~-~vL~~~T~~Grdla~rlAarL 102 (312)
T PRK11916 40 QAQAVMPYGPKCIYVLEQND---------ALQRTENYAESIAALLKDKHPA-MLLLAATKRGKALAARLSVQL 102 (312)
T ss_pred HHHHHHhcCCCEEEEeCCcc---------cccChHHHHHHHHHHHHhcCCC-EEEECCCcchHHHHHHHHHHh
Confidence 3566666665 577777652 1244788899999988887644 66666655 557888998875
No 408
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=20.97 E-value=2.3e+02 Score=17.74 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=25.3
Q ss_pred ChhhHHHHHHHHHHHh----cCCCeEEEeeChhHHHHHHHHHhC
Q 027952 73 NVTSKREHFYQLWKTY----IKRPMILVGPSLGAAVAVDFAVNH 112 (216)
Q Consensus 73 ~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 112 (216)
.....++...+.++.. ..+++.++|-|-|=.+|.+.++-+
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3444444444444442 456899999999988888777765
No 409
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.74 E-value=1.2e+02 Score=24.56 Aligned_cols=22 Identities=32% Similarity=0.302 Sum_probs=17.2
Q ss_pred cCCCeEEEeeChhHHHHHHHHH
Q 027952 89 IKRPMILVGPSLGAAVAVDFAV 110 (216)
Q Consensus 89 ~~~~~~l~G~S~Gg~~a~~~a~ 110 (216)
...+..+.|||+|=..|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3667899999999777766655
No 410
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=20.60 E-value=2.9e+02 Score=24.74 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=56.0
Q ss_pred CCCCCcEEEEcCCCCCcchHHhhhh--------HHHhCCCeEEEEcCCC----CCCCCCCCCCCCChhhHHHHHHHHHHH
Q 027952 20 PSKTSPVVLLHGFDSSCLEWRCTYP--------LLEEAGLETWAVDILG----WGFSDLERLPPCNVTSKREHFYQLWKT 87 (216)
Q Consensus 20 ~~~~~~lv~~hG~~~~~~~~~~~~~--------~l~~~g~~v~~~d~~g----~G~s~~~~~~~~~~~~~~~~~~~~~~~ 87 (216)
..+.-|+-+--|++-.......+.+ .+..-|=+|+.-.--| +|+-+.+ ..-....-+..+...++.
T Consensus 255 ~~~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~--~ekrTRvRaRvis~al~d 332 (655)
T COG3887 255 SQKNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNP--MEKRTRVRARVISTALSD 332 (655)
T ss_pred hccCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcch--hHHhHHHHHHHHHHHHHH
Confidence 3455677777777644443322221 2333355565553333 3332221 111122233444444443
Q ss_pred h--cCCCeEEEee------ChhHHHHHHHHHhCccccceEEEEcccc
Q 027952 88 Y--IKRPMILVGP------SLGAAVAVDFAVNHPEAVENLVFIDASV 126 (216)
Q Consensus 88 ~--~~~~~~l~G~------S~Gg~~a~~~a~~~~~~~~~lvli~~~~ 126 (216)
. ..++++++|| +.|+.+++..-+....+ ++-++++|.-
T Consensus 333 ~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 333 IIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 3 3678999999 68999998887765554 6777778744
No 411
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=20.46 E-value=69 Score=22.57 Aligned_cols=13 Identities=31% Similarity=0.600 Sum_probs=11.3
Q ss_pred eEEEeeChhHHHH
Q 027952 93 MILVGPSLGAAVA 105 (216)
Q Consensus 93 ~~l~G~S~Gg~~a 105 (216)
..++|.|.|+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 7899999999873
No 412
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=20.44 E-value=2.2e+02 Score=21.10 Aligned_cols=70 Identities=9% Similarity=-0.090 Sum_probs=31.1
Q ss_pred CCCcEEEEcCCCCCcchHHhhhhHH-HhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCe
Q 027952 22 KTSPVVLLHGFDSSCLEWRCTYPLL-EEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPM 93 (216)
Q Consensus 22 ~~~~lv~~hG~~~~~~~~~~~~~~l-~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (216)
++.++|+.+-+...-+.-..-...| ...|+.++-+-.-.. ..++.+...+++-..+.+++.++....+|+
T Consensus 115 e~rPlvlaPamN~~m~~~~~Ni~~L~~~~g~~~v~f~qd~~--~~k~~s~~~~~~~~~~~~~~a~~~~q~qp~ 185 (187)
T TIGR02852 115 NNKPVVLAISTNDALGLNAVNLMRLLNTKNIYFVPFGQDDP--FKKPNSLVAKMDYLIPTIEEALQGRQLQPI 185 (187)
T ss_pred CCCCEEEEECcCHHHHhCHHHHHHHHHcCCEEEEeecCCCC--CCCchhHHhhHHhhHHHHHHHHhCCCcCcc
Confidence 4567777776553222112333444 344555544322111 112222333555556666665555444443
No 413
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=20.43 E-value=1.7e+02 Score=22.29 Aligned_cols=44 Identities=16% Similarity=0.078 Sum_probs=24.8
Q ss_pred CCCCCCCCCCCCChhhHHH------HHHHHHHHh-cCCCeEEEeeChhHHH
Q 027952 61 WGFSDLERLPPCNVTSKRE------HFYQLWKTY-IKRPMILVGPSLGAAV 104 (216)
Q Consensus 61 ~G~s~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~l~G~S~Gg~~ 104 (216)
||..+.+.....+-+++.+ .+..+++.+ ....+.++|.|+.=.-
T Consensus 143 HG~~~~~~~~VlT~~dY~~~~~~~~~~~~~l~~ll~~~~~LFiG~S~~D~~ 193 (242)
T cd01406 143 HGDVDDDESIVLTKSDYERYYLKNGWATKFLKSDLEKYTVLFIGYSLTDPN 193 (242)
T ss_pred ecccCCCCceEecHHHHHHHHhccHHHHHHHHHHHhcCcEEEEEcCCCCCc
Confidence 5555443322334455544 334455554 4567999999998443
No 414
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.24 E-value=2.2e+02 Score=20.28 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=30.7
Q ss_pred hhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHH
Q 027952 42 TYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAA 103 (216)
Q Consensus 42 ~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 103 (216)
+...+. . -.+++.|-+|- ..+-+++++.+.++...- .+-.+++|-+.|=.
T Consensus 59 il~~~~-~-~~~i~LDe~Gk---------~~sS~~fA~~l~~~~~~g-~~i~FvIGGa~G~~ 108 (153)
T TIGR00246 59 ILAAIG-K-AHVVTLDIPGK---------PWTTPQLADTLEKWKTDG-RDVTLLIGGPEGLS 108 (153)
T ss_pred HHHhCC-C-CeEEEEcCCCC---------cCCHHHHHHHHHHHhccC-CeEEEEEcCCCcCC
Confidence 444444 2 46888887763 356677777777764332 34577777776643
No 415
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=20.03 E-value=4.4e+02 Score=22.32 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=40.1
Q ss_pred HhhhhHHHhCCCeEEEEcCCCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCCeEEEeeChhHHHHHHHHHhCccccceE
Q 027952 40 RCTYPLLEEAGLETWAVDILGWGFSDLERLPPCNVTSKREHFYQLWKTYIKRPMILVGPSLGAAVAVDFAVNHPEAVENL 119 (216)
Q Consensus 40 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~l 119 (216)
+..+..|.+.|..|+++- ..+.+++...+.+.++ .++-.++ .-||-+...+..++|+..+.+
T Consensus 71 d~vaaaL~~~gi~v~a~~-------------~~~~~ey~~~~~~~l~---~~p~~ii--DdGgdl~~~~~~~~~~~~~~~ 132 (406)
T TIGR00936 71 DDVAAALAKAGIPVFAWR-------------GETNEEYYWAIEQVLD---HEPNIII--DDGADLIFLLHTERPELLEKI 132 (406)
T ss_pred HHHHHHHHhCCceEEEec-------------CCCHHHHHHHHHHHhc---CCCCEEE--ecccHHHHHHHHhhhhhhhcc
Confidence 457778888888888872 2245666666666654 3444444 677887777777776654444
Q ss_pred E
Q 027952 120 V 120 (216)
Q Consensus 120 v 120 (216)
+
T Consensus 133 ~ 133 (406)
T TIGR00936 133 I 133 (406)
T ss_pred E
Confidence 3
Done!