Query 027956
Match_columns 216
No_of_seqs 138 out of 1273
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 04:03:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027956.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027956hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02473 glutathione S-transfe 100.0 1.3E-41 2.9E-46 251.7 22.1 209 1-210 1-211 (214)
2 PLN02395 glutathione S-transfe 100.0 2.3E-41 4.9E-46 250.6 22.7 214 1-214 1-214 (215)
3 PRK09481 sspA stringent starva 100.0 7E-39 1.5E-43 236.3 20.5 191 3-210 11-202 (211)
4 PRK15113 glutathione S-transfe 100.0 9.2E-37 2E-41 225.5 19.2 202 3-214 6-212 (214)
5 PRK13972 GSH-dependent disulfi 100.0 1.3E-36 2.9E-41 224.9 18.4 197 3-211 2-206 (215)
6 PRK10542 glutathionine S-trans 100.0 3.5E-36 7.6E-41 220.7 18.5 195 3-211 1-198 (201)
7 KOG0406 Glutathione S-transfer 100.0 1E-35 2.2E-40 214.4 16.7 194 3-210 10-211 (231)
8 COG0625 Gst Glutathione S-tran 100.0 6.4E-35 1.4E-39 215.4 20.4 194 3-205 1-199 (211)
9 TIGR01262 maiA maleylacetoacet 100.0 5.6E-35 1.2E-39 215.7 19.6 201 4-211 1-205 (210)
10 PRK11752 putative S-transferas 100.0 1.2E-34 2.5E-39 219.9 21.7 200 2-210 44-258 (264)
11 KOG0867 Glutathione S-transfer 100.0 3.7E-35 8E-40 217.3 16.5 206 1-210 1-209 (226)
12 PRK10357 putative glutathione 100.0 4.4E-34 9.5E-39 209.7 19.0 195 3-208 1-198 (202)
13 KOG0868 Glutathione S-transfer 100.0 2.1E-33 4.6E-38 190.6 15.8 198 3-210 6-207 (217)
14 PTZ00057 glutathione s-transfe 100.0 7.4E-32 1.6E-36 198.0 18.7 185 3-211 5-200 (205)
15 TIGR00862 O-ClC intracellular 100.0 3.4E-31 7.4E-36 195.7 17.3 180 8-209 16-219 (236)
16 PLN02378 glutathione S-transfe 100.0 3.9E-31 8.5E-36 195.1 12.7 177 7-210 16-199 (213)
17 KOG1695 Glutathione S-transfer 100.0 4.5E-30 9.7E-35 184.2 16.2 195 1-210 1-200 (206)
18 PRK10387 glutaredoxin 2; Provi 100.0 9.2E-30 2E-34 187.9 14.2 187 3-204 1-207 (210)
19 PLN02817 glutathione dehydroge 100.0 2.3E-29 4.9E-34 190.0 16.5 176 8-210 70-251 (265)
20 TIGR02182 GRXB Glutaredoxin, G 100.0 5.5E-28 1.2E-32 177.8 12.8 186 4-204 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 7.2E-27 1.6E-31 167.9 11.4 207 3-210 27-287 (325)
22 PLN02907 glutamate-tRNA ligase 99.9 3.2E-25 6.9E-30 186.3 17.3 157 1-203 1-159 (722)
23 KOG1422 Intracellular Cl- chan 99.8 3E-20 6.5E-25 130.3 13.0 178 8-209 18-204 (221)
24 cd03052 GST_N_GDAP1 GST_N fami 99.8 1E-20 2.3E-25 115.4 8.3 72 3-74 1-73 (73)
25 cd03045 GST_N_Delta_Epsilon GS 99.8 8.3E-20 1.8E-24 112.3 8.4 73 3-75 1-74 (74)
26 cd03050 GST_N_Theta GST_N fami 99.8 1.4E-19 3E-24 111.8 9.1 75 3-77 1-76 (76)
27 cd03053 GST_N_Phi GST_N family 99.8 1.6E-19 3.4E-24 111.6 8.9 75 2-76 1-76 (76)
28 PF02798 GST_N: Glutathione S- 99.8 1.9E-19 4E-24 110.9 8.8 73 1-75 1-76 (76)
29 cd03048 GST_N_Ure2p_like GST_N 99.8 2.2E-19 4.8E-24 112.2 9.2 75 3-78 2-80 (81)
30 PF13417 GST_N_3: Glutathione 99.8 3.2E-19 6.9E-24 109.8 8.0 71 5-78 1-72 (75)
31 cd03059 GST_N_SspA GST_N famil 99.8 6.2E-19 1.3E-23 108.1 8.7 72 3-77 1-73 (73)
32 cd03047 GST_N_2 GST_N family, 99.8 5E-19 1.1E-23 108.4 8.2 72 3-74 1-73 (73)
33 cd03057 GST_N_Beta GST_N famil 99.8 7.9E-19 1.7E-23 108.7 8.8 76 3-78 1-77 (77)
34 cd03056 GST_N_4 GST_N family, 99.8 6.3E-19 1.4E-23 108.0 8.2 72 3-74 1-73 (73)
35 cd03046 GST_N_GTT1_like GST_N 99.8 1.1E-18 2.4E-23 107.8 9.0 75 3-78 1-76 (76)
36 cd03058 GST_N_Tau GST_N family 99.8 1.6E-18 3.6E-23 106.4 8.6 72 3-77 1-74 (74)
37 cd03041 GST_N_2GST_N GST_N fam 99.8 1.1E-18 2.4E-23 107.8 7.8 73 3-77 2-77 (77)
38 cd03042 GST_N_Zeta GST_N famil 99.8 1.7E-18 3.7E-23 106.1 8.3 72 3-74 1-73 (73)
39 cd03061 GST_N_CLIC GST_N famil 99.8 1.9E-18 4E-23 108.4 8.4 67 9-78 20-87 (91)
40 cd03044 GST_N_EF1Bgamma GST_N 99.8 2.8E-18 6E-23 105.6 8.4 71 4-75 2-74 (75)
41 cd03076 GST_N_Pi GST_N family, 99.8 1.3E-18 2.7E-23 106.5 6.4 71 2-75 1-72 (73)
42 cd03051 GST_N_GTT2_like GST_N 99.8 2.9E-18 6.3E-23 105.3 7.6 72 3-74 1-74 (74)
43 cd03039 GST_N_Sigma_like GST_N 99.7 4E-18 8.6E-23 104.1 6.1 71 3-75 1-72 (72)
44 cd03060 GST_N_Omega_like GST_N 99.7 1.3E-17 2.8E-22 101.5 8.1 67 4-73 2-70 (71)
45 cd03187 GST_C_Phi GST_C family 99.7 3.6E-17 7.7E-22 109.7 10.2 117 91-208 2-118 (118)
46 KOG4244 Failed axon connection 99.7 2.6E-16 5.6E-21 114.5 14.5 177 10-201 60-273 (281)
47 cd03075 GST_N_Mu GST_N family, 99.7 2.8E-17 6E-22 102.6 7.8 74 4-77 2-82 (82)
48 cd03055 GST_N_Omega GST_N fami 99.7 3.3E-17 7.2E-22 104.0 7.9 70 2-74 18-89 (89)
49 cd03049 GST_N_3 GST_N family, 99.7 3.6E-17 7.8E-22 100.1 7.4 69 3-74 1-73 (73)
50 cd03037 GST_N_GRX2 GST_N famil 99.7 4.4E-17 9.6E-22 99.2 7.3 69 3-75 1-71 (71)
51 cd03196 GST_C_5 GST_C family, 99.7 6.3E-17 1.4E-21 107.8 7.9 113 87-207 2-114 (115)
52 PF13409 GST_N_2: Glutathione 99.7 8E-17 1.7E-21 97.5 7.7 67 10-76 1-70 (70)
53 cd03077 GST_N_Alpha GST_N fami 99.7 1E-16 2.2E-21 99.5 7.9 70 3-78 2-77 (79)
54 cd03038 GST_N_etherase_LigE GS 99.7 1E-16 2.3E-21 100.8 7.4 69 9-78 14-84 (84)
55 cd03080 GST_N_Metaxin_like GST 99.7 2.3E-16 5.1E-21 96.9 7.9 66 3-78 2-75 (75)
56 cd03178 GST_C_Ure2p_like GST_C 99.7 3.7E-16 8.1E-21 103.9 9.1 112 91-208 1-112 (113)
57 KOG3029 Glutathione S-transfer 99.7 3.7E-16 7.9E-21 114.4 9.2 192 3-200 91-354 (370)
58 cd03043 GST_N_1 GST_N family, 99.7 4E-16 8.6E-21 95.3 7.7 68 6-74 5-73 (73)
59 cd03040 GST_N_mPGES2 GST_N fam 99.7 4.4E-16 9.6E-21 96.3 8.0 71 3-78 2-77 (77)
60 cd03188 GST_C_Beta GST_C famil 99.7 2.8E-16 6.1E-21 104.7 7.5 113 91-208 2-114 (114)
61 cd03190 GST_C_ECM4_like GST_C 99.6 9.6E-16 2.1E-20 105.9 8.7 110 90-210 3-118 (142)
62 cd03186 GST_C_SspA GST_N famil 99.6 1.5E-15 3.4E-20 100.0 9.2 105 90-207 2-106 (107)
63 COG2999 GrxB Glutaredoxin 2 [P 99.6 3.6E-15 7.8E-20 102.0 10.1 187 3-204 1-207 (215)
64 cd03183 GST_C_Theta GST_C fami 99.6 3.5E-15 7.6E-20 101.2 9.9 118 92-211 2-123 (126)
65 cd03185 GST_C_Tau GST_C family 99.6 1.7E-15 3.6E-20 102.8 8.0 110 90-210 2-115 (126)
66 cd03182 GST_C_GTT2_like GST_C 99.6 3.9E-15 8.4E-20 99.6 9.3 115 88-204 1-117 (117)
67 cd03180 GST_C_2 GST_C family, 99.6 5.9E-15 1.3E-19 97.6 9.9 109 91-204 2-110 (110)
68 cd03189 GST_C_GTT1_like GST_C 99.6 5.1E-15 1.1E-19 99.3 9.7 114 86-202 2-119 (119)
69 cd03181 GST_C_EFB1gamma GST_C 99.6 2.7E-15 5.9E-20 101.3 8.2 115 92-211 2-117 (123)
70 cd03191 GST_C_Zeta GST_C famil 99.6 4.2E-15 9.1E-20 100.1 9.1 115 90-209 2-118 (121)
71 cd00570 GST_N_family Glutathio 99.6 5.3E-15 1.2E-19 89.6 7.8 70 3-74 1-71 (71)
72 COG0435 ECM4 Predicted glutath 99.6 1E-14 2.3E-19 106.7 10.5 194 3-209 52-285 (324)
73 cd03177 GST_C_Delta_Epsilon GS 99.6 8.8E-15 1.9E-19 98.1 8.8 109 91-208 2-110 (118)
74 cd03209 GST_C_Mu GST_C family, 99.6 1.3E-14 2.8E-19 97.7 9.5 109 91-211 2-110 (121)
75 cd03200 GST_C_JTV1 GST_C famil 99.6 1.8E-14 3.9E-19 92.6 7.2 95 70-200 1-95 (96)
76 cd03054 GST_N_Metaxin GST_N fa 99.5 2.4E-14 5.3E-19 87.2 7.2 64 3-76 1-72 (72)
77 cd03208 GST_C_Alpha GST_C fami 99.5 2.6E-14 5.7E-19 98.0 8.0 112 91-211 3-116 (137)
78 cd03184 GST_C_Omega GST_C fami 99.5 2.2E-14 4.8E-19 96.9 6.7 107 91-210 2-113 (124)
79 cd03210 GST_C_Pi GST_C family, 99.5 1.3E-13 2.9E-18 93.3 9.8 108 91-211 3-113 (126)
80 cd03207 GST_C_8 GST_C family, 99.5 3.8E-14 8.3E-19 92.6 6.1 100 97-210 3-102 (103)
81 KOG2903 Predicted glutathione 99.5 8.4E-14 1.8E-18 101.0 8.0 194 3-208 38-286 (319)
82 cd03198 GST_C_CLIC GST_C famil 99.5 8E-14 1.7E-18 94.1 7.4 83 127-210 22-124 (134)
83 cd03203 GST_C_Lambda GST_C fam 99.5 2.4E-13 5.1E-18 91.3 8.5 104 88-210 1-111 (120)
84 cd03195 GST_C_4 GST_C family, 99.5 2.7E-13 5.9E-18 90.1 8.0 112 89-210 1-113 (114)
85 cd03206 GST_C_7 GST_C family, 99.5 1.5E-13 3.2E-18 89.3 6.6 99 96-204 2-100 (100)
86 cd03179 GST_C_1 GST_C family, 99.5 8.9E-14 1.9E-18 91.1 5.4 104 91-199 2-105 (105)
87 PF00043 GST_C: Glutathione S- 99.5 1.2E-13 2.5E-18 88.9 5.4 73 129-202 23-95 (95)
88 KOG3027 Mitochondrial outer me 99.5 3.4E-12 7.3E-17 89.7 12.8 173 14-200 38-247 (257)
89 PF13410 GST_C_2: Glutathione 99.4 2.7E-13 5.9E-18 81.9 5.0 68 130-197 2-69 (69)
90 cd03194 GST_C_3 GST_C family, 99.4 1.6E-12 3.4E-17 86.4 7.3 107 96-209 4-113 (114)
91 cd03204 GST_C_GDAP1 GST_C fami 99.4 1.3E-12 2.8E-17 85.6 5.9 78 127-204 22-111 (111)
92 cd03079 GST_N_Metaxin2 GST_N f 99.3 5.7E-12 1.2E-16 76.0 6.8 59 9-76 15-74 (74)
93 cd03201 GST_C_DHAR GST_C famil 99.3 1.6E-12 3.4E-17 87.2 4.0 77 133-210 29-110 (121)
94 PF14497 GST_C_3: Glutathione 99.3 4.5E-12 9.8E-17 82.1 5.3 67 130-200 31-99 (99)
95 cd03202 GST_C_etherase_LigE GS 99.3 9.2E-12 2E-16 84.0 6.9 68 132-200 56-123 (124)
96 cd00299 GST_C_family Glutathio 99.3 5.9E-12 1.3E-16 81.5 4.4 98 96-198 2-100 (100)
97 cd03192 GST_C_Sigma_like GST_C 99.2 1.3E-11 2.9E-16 80.7 5.2 101 91-198 2-104 (104)
98 cd03193 GST_C_Metaxin GST_C fa 99.1 1.1E-10 2.4E-15 73.8 5.6 66 134-199 19-88 (88)
99 cd03205 GST_C_6 GST_C family, 99.1 1.9E-10 4.1E-15 74.3 6.4 96 97-198 3-98 (98)
100 TIGR02190 GlrX-dom Glutaredoxi 99.1 6.4E-10 1.4E-14 68.8 6.7 70 2-74 9-79 (79)
101 KOG3028 Translocase of outer m 99.0 2.8E-08 6.2E-13 74.8 15.8 177 11-200 17-233 (313)
102 cd03211 GST_C_Metaxin2 GST_C f 99.0 2E-10 4.4E-15 77.5 3.8 68 131-199 54-126 (126)
103 cd03078 GST_N_Metaxin1_like GS 99.0 3.7E-09 8.1E-14 64.1 7.3 57 10-76 15-72 (73)
104 PRK10638 glutaredoxin 3; Provi 99.0 4.1E-09 9E-14 65.8 7.2 73 1-75 1-75 (83)
105 cd03212 GST_C_Metaxin1_3 GST_C 98.9 1.6E-09 3.4E-14 74.2 5.1 70 130-200 60-134 (137)
106 cd03029 GRX_hybridPRX5 Glutare 98.9 1.8E-08 3.9E-13 61.1 7.3 70 2-74 2-72 (72)
107 PF14834 GST_C_4: Glutathione 98.9 4.4E-08 9.6E-13 63.0 9.2 113 88-210 1-114 (117)
108 cd03197 GST_C_mPGES2 GST_C fam 98.8 4.2E-09 9.1E-14 72.0 4.2 64 136-200 81-145 (149)
109 PRK10329 glutaredoxin-like pro 98.8 2.9E-08 6.2E-13 61.5 6.5 61 1-64 1-62 (81)
110 cd03027 GRX_DEP Glutaredoxin ( 98.6 1.4E-07 3E-12 57.3 6.4 66 3-70 3-69 (73)
111 COG0695 GrxC Glutaredoxin and 98.6 1.7E-07 3.8E-12 57.8 6.6 72 1-73 1-74 (80)
112 cd02066 GRX_family Glutaredoxi 98.6 3E-07 6.6E-12 55.3 6.3 69 2-72 1-70 (72)
113 TIGR02196 GlrX_YruB Glutaredox 98.6 3.4E-07 7.4E-12 55.4 6.5 69 3-73 2-73 (74)
114 cd02976 NrdH NrdH-redoxin (Nrd 98.5 3.1E-07 6.8E-12 55.5 5.6 62 3-66 2-64 (73)
115 PRK11200 grxA glutaredoxin 1; 98.5 1.1E-06 2.3E-11 55.1 7.5 76 1-78 1-84 (85)
116 cd03418 GRX_GRXb_1_3_like Glut 98.4 1.3E-06 2.8E-11 53.2 6.5 69 3-73 2-72 (75)
117 TIGR02181 GRX_bact Glutaredoxi 98.3 2.4E-06 5.3E-11 52.6 6.0 71 3-75 1-72 (79)
118 TIGR02194 GlrX_NrdH Glutaredox 98.3 1.9E-06 4.1E-11 52.2 5.3 56 3-61 1-57 (72)
119 PF00462 Glutaredoxin: Glutare 98.2 2.6E-06 5.6E-11 49.5 4.0 59 3-63 1-60 (60)
120 KOG1147 Glutamyl-tRNA syntheta 98.2 3E-06 6.5E-11 68.5 5.5 162 1-208 1-162 (712)
121 TIGR02200 GlrX_actino Glutared 98.1 6.9E-06 1.5E-10 50.2 5.1 63 3-67 2-67 (77)
122 cd03419 GRX_GRXh_1_2_like Glut 98.1 1.8E-05 4E-10 49.0 6.4 73 3-75 2-76 (82)
123 TIGR02189 GlrX-like_plant Glut 98.1 1.9E-05 4.1E-10 50.9 6.3 70 2-71 9-80 (99)
124 TIGR02183 GRXA Glutaredoxin, G 98.0 3.2E-05 6.9E-10 48.5 6.9 74 3-78 2-83 (86)
125 PF10568 Tom37: Outer mitochon 97.9 6.6E-05 1.4E-09 45.1 6.7 54 10-73 13-71 (72)
126 PF04399 Glutaredoxin2_C: Glut 97.9 3.2E-05 7E-10 52.1 5.6 68 132-204 57-124 (132)
127 PHA03050 glutaredoxin; Provisi 97.9 7.2E-05 1.6E-09 48.9 6.6 69 3-71 15-88 (108)
128 TIGR02180 GRX_euk Glutaredoxin 97.7 0.00021 4.6E-09 44.3 6.2 73 3-75 1-77 (84)
129 cd03028 GRX_PICOT_like Glutare 97.6 0.00034 7.4E-09 44.2 6.8 69 3-73 10-84 (90)
130 TIGR00365 monothiol glutaredox 97.6 0.00045 9.7E-09 44.3 6.7 68 3-72 14-87 (97)
131 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00015 3.3E-09 48.4 4.5 67 133-204 59-125 (128)
132 PRK12759 bifunctional gluaredo 97.0 0.0032 6.9E-08 51.2 7.6 68 1-71 1-79 (410)
133 cd03031 GRX_GRX_like Glutaredo 97.0 0.0037 8E-08 43.2 6.5 67 3-71 2-79 (147)
134 COG1393 ArsC Arsenate reductas 96.7 0.0027 5.8E-08 42.1 4.1 33 1-33 1-34 (117)
135 KOG1752 Glutaredoxin and relat 96.4 0.025 5.5E-07 36.6 7.0 72 3-74 16-89 (104)
136 PRK10824 glutaredoxin-4; Provi 96.4 0.017 3.7E-07 38.1 6.3 68 3-72 17-90 (115)
137 PRK01655 spxA transcriptional 96.4 0.0057 1.2E-07 41.5 3.9 31 3-33 2-33 (131)
138 cd02973 TRX_GRX_like Thioredox 96.4 0.029 6.4E-07 32.9 6.7 56 3-64 3-64 (67)
139 cd03032 ArsC_Spx Arsenate Redu 96.3 0.0069 1.5E-07 40.1 4.1 31 3-33 2-33 (115)
140 PRK10026 arsenate reductase; P 96.2 0.0081 1.8E-07 41.1 3.9 33 1-33 1-35 (141)
141 cd03036 ArsC_like Arsenate Red 96.0 0.0092 2E-07 39.2 3.5 32 3-34 1-33 (111)
142 PTZ00062 glutaredoxin; Provisi 96.0 0.032 7E-07 40.8 6.6 67 3-71 115-187 (204)
143 PRK13344 spxA transcriptional 96.0 0.013 2.8E-07 39.8 4.1 31 3-33 2-33 (132)
144 cd02977 ArsC_family Arsenate R 95.9 0.011 2.4E-07 38.4 3.5 31 3-33 1-32 (105)
145 PRK12559 transcriptional regul 95.8 0.017 3.7E-07 39.2 4.1 31 3-33 2-33 (131)
146 PRK10853 putative reductase; P 95.7 0.02 4.3E-07 38.1 4.0 32 2-33 1-33 (118)
147 cd03033 ArsC_15kD Arsenate Red 95.3 0.027 5.9E-07 37.1 3.7 31 3-33 2-33 (113)
148 cd03035 ArsC_Yffb Arsenate Red 95.3 0.029 6.3E-07 36.4 3.7 31 3-33 1-32 (105)
149 TIGR01617 arsC_related transcr 95.2 0.03 6.4E-07 37.2 3.7 31 3-33 1-32 (117)
150 cd03030 GRX_SH3BGR Glutaredoxi 95.2 0.12 2.6E-06 32.6 6.2 67 3-71 2-79 (92)
151 TIGR01616 nitro_assoc nitrogen 95.0 0.041 8.9E-07 37.0 3.9 32 2-33 2-34 (126)
152 PF04908 SH3BGR: SH3-binding, 94.4 0.11 2.3E-06 33.3 4.4 63 1-65 1-79 (99)
153 TIGR00412 redox_disulf_2 small 94.4 0.51 1.1E-05 28.5 7.4 56 1-64 1-61 (76)
154 COG4545 Glutaredoxin-related p 94.0 0.19 4.1E-06 30.0 4.5 64 1-64 1-77 (85)
155 cd03034 ArsC_ArsC Arsenate Red 93.8 0.095 2.1E-06 34.5 3.6 31 3-33 1-32 (112)
156 TIGR00014 arsC arsenate reduct 93.6 0.11 2.3E-06 34.3 3.6 31 3-33 1-32 (114)
157 PF11287 DUF3088: Protein of u 93.3 0.3 6.5E-06 31.7 5.0 70 6-78 22-108 (112)
158 PF05768 DUF836: Glutaredoxin- 93.3 0.48 1E-05 29.0 5.9 54 2-60 1-57 (81)
159 PF11801 Tom37_C: Tom37 C-term 91.0 0.44 9.6E-06 33.8 4.1 39 138-176 112-154 (168)
160 cd03026 AhpF_NTD_C TRX-GRX-lik 90.3 2.3 5E-05 26.6 6.6 56 3-64 16-77 (89)
161 COG0278 Glutaredoxin-related p 89.1 1.8 4E-05 27.6 5.2 63 7-71 26-90 (105)
162 PF13192 Thioredoxin_3: Thiore 88.7 3.6 7.8E-05 24.7 7.0 57 1-65 1-62 (76)
163 TIGR00411 redox_disulf_1 small 87.9 4.1 8.8E-05 24.5 6.5 55 3-61 3-62 (82)
164 cd01659 TRX_superfamily Thiore 87.4 1.8 3.9E-05 23.8 4.5 53 3-58 1-59 (69)
165 PF09635 MetRS-N: MetRS-N bind 85.1 0.47 1E-05 31.4 1.1 27 52-78 35-63 (122)
166 PF03960 ArsC: ArsC family; I 82.6 1.6 3.5E-05 28.5 2.9 28 6-33 1-29 (110)
167 KOG1668 Elongation factor 1 be 82.5 1.5 3.3E-05 32.5 2.9 60 140-206 10-69 (231)
168 PHA02125 thioredoxin-like prot 71.4 19 0.00041 21.4 6.1 51 3-59 2-53 (75)
169 KOG0911 Glutaredoxin-related p 60.5 27 0.00058 26.0 4.9 64 7-73 150-214 (227)
170 TIGR03143 AhpF_homolog putativ 57.2 34 0.00074 29.4 5.9 57 3-65 480-542 (555)
171 TIGR03140 AhpF alkyl hydropero 57.0 14 0.00031 31.3 3.6 60 3-66 121-184 (515)
172 PRK15317 alkyl hydroperoxide r 51.3 22 0.00047 30.2 3.8 70 3-76 120-197 (517)
173 PF10022 DUF2264: Uncharacteri 49.3 45 0.00098 27.0 5.1 137 53-201 98-239 (361)
174 PF07862 Nif11: Nitrogen fixat 43.6 34 0.00074 18.4 2.6 25 189-213 4-28 (49)
175 TIGR02681 phage_pRha phage reg 41.3 32 0.00068 22.5 2.6 26 53-78 2-28 (108)
176 PRK09266 hypothetical protein; 36.4 47 0.001 25.4 3.3 60 19-78 200-259 (266)
177 TIGR01764 excise DNA binding d 34.5 71 0.0015 16.4 3.2 26 49-74 23-48 (49)
178 PF09314 DUF1972: Domain of un 34.2 43 0.00093 24.2 2.6 20 59-78 154-173 (185)
179 PHA03075 glutaredoxin-like pro 30.7 96 0.0021 20.6 3.4 65 3-77 5-70 (123)
180 cd02953 DsbDgamma DsbD gamma f 30.1 1.4E+02 0.0031 18.6 4.4 54 3-57 15-77 (104)
181 KOG0075 GTP-binding ADP-ribosy 29.4 1.7E+02 0.0037 20.5 4.6 60 1-60 65-130 (186)
182 cd02949 TRX_NTR TRX domain, no 29.2 1.4E+02 0.0031 18.3 6.3 56 3-62 17-79 (97)
183 PF12062 HSNSD: heparan sulfat 28.6 1.6E+02 0.0035 24.8 5.2 49 3-66 63-117 (487)
184 PF12290 DUF3802: Protein of u 27.1 1.8E+02 0.0038 19.2 4.1 25 128-152 58-82 (113)
185 PF11823 DUF3343: Protein of u 26.5 1E+02 0.0022 18.2 3.0 34 1-34 1-35 (73)
186 TIGR03798 ocin_TIGR03798 bacte 26.5 89 0.0019 18.0 2.6 24 189-212 2-25 (64)
187 PF09413 DUF2007: Domain of un 26.2 54 0.0012 18.8 1.7 30 4-33 2-32 (67)
188 COG3019 Predicted metal-bindin 25.3 1.6E+02 0.0034 20.3 3.9 69 3-77 28-104 (149)
189 cd04911 ACT_AKiii-YclM-BS_1 AC 24.8 88 0.0019 19.0 2.4 25 10-34 14-39 (76)
190 PF04564 U-box: U-box domain; 23.7 1.4E+02 0.0031 17.6 3.2 49 51-100 14-69 (73)
191 cd02947 TRX_family TRX family; 23.6 1.6E+02 0.0035 17.1 6.8 53 3-61 14-74 (93)
192 PF11732 Thoc2: Transcription- 23.0 91 0.002 19.0 2.2 42 154-199 35-76 (77)
193 PF14811 TPD: Protein of unkno 22.6 43 0.00092 23.0 0.8 51 14-77 37-87 (139)
194 PF09849 DUF2076: Uncharacteri 22.4 3.6E+02 0.0078 20.6 8.1 67 65-150 5-71 (247)
195 COG1102 Cmk Cytidylate kinase 21.8 1.5E+02 0.0032 21.3 3.3 29 1-29 1-30 (179)
196 PF12728 HTH_17: Helix-turn-he 21.7 1.4E+02 0.0031 15.8 3.5 29 48-76 22-50 (51)
197 PF15608 PELOTA_1: PELOTA RNA 21.4 2.4E+02 0.0052 18.2 3.9 26 5-30 60-86 (100)
198 cd01557 BCAT_beta_family BCAT_ 21.1 62 0.0013 25.0 1.6 64 14-77 206-273 (279)
199 PRK06092 4-amino-4-deoxychoris 20.9 1.2E+02 0.0026 23.1 3.2 58 19-77 208-265 (268)
200 TIGR02187 GlrX_arch Glutaredox 20.8 3.5E+02 0.0075 19.8 5.6 53 3-59 137-193 (215)
201 PRK11508 sulfur transfer prote 20.8 78 0.0017 20.7 1.7 20 190-209 49-68 (109)
202 cd00449 PLPDE_IV PyridoxaL 5'- 20.4 91 0.002 23.5 2.3 60 16-75 193-254 (256)
No 1
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=1.3e-41 Score=251.67 Aligned_cols=209 Identities=51% Similarity=0.920 Sum_probs=175.5
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcc
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRS 79 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~ 79 (216)
|+|+||+.+.|++ +|++++|+++|++|+.+.++..++++++++++.+||.|+||+|+++|.+|+||.+|++||++.++.
T Consensus 1 ~~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~ 80 (214)
T PLN02473 1 MVVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYAD 80 (214)
T ss_pred CceEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCC
Confidence 7899999999999 999999999999999999998888888999999999999999999999999999999999999975
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCC
Q 027956 80 QGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGD 159 (216)
Q Consensus 80 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~ 159 (216)
.+..++|.++.+++++++|+.+..+.+.+.....+......+..+...+....+.....+.+.++.||++|++++|++|+
T Consensus 81 ~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 160 (214)
T PLN02473 81 QGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGD 160 (214)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCC
Confidence 44468899999999999999999887776544333333333322334445556667788999999999999988999999
Q ss_pred CcchhhhcchhhhhhhcCCCC-cccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 160 FFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 160 ~~t~aD~~l~~~l~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
++|+||+++++.+.++..... .... +.+|+|++|++++.++|++++++.+
T Consensus 161 ~~t~ADi~~~~~~~~~~~~~~~~~~~-~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 161 EFTLADLTHMPGMRYIMNETSLSGLV-TSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCHHHHHHHHHHHHHHhccccHHHH-hcCHHHHHHHHHHhcChhhHHHHHH
Confidence 999999999998877643222 1233 7899999999999999999999875
No 2
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=2.3e-41 Score=250.61 Aligned_cols=214 Identities=71% Similarity=1.223 Sum_probs=176.1
Q ss_pred CeeEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhccc
Q 027956 1 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 1 M~~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|++|||+.+.|+.+|++++|.++|++|+.+.++...+++++++|+++||.|+||+|+++|.+|+||.+|++||+++++..
T Consensus 1 ~~~~ly~~~~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~ 80 (215)
T PLN02395 1 MVLKVYGPAFASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQ 80 (215)
T ss_pred CeEEEEcCCcCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCC
Confidence 88999997775449999999999999999999987777788999999999999999999999999999999999999753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCC
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDF 160 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~ 160 (216)
+..++|.++.+++++++|+.+....+.+.+.............+....+...+.....+.+.++.||++|++++|++|++
T Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~ 160 (215)
T PLN02395 81 GPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDF 160 (215)
T ss_pred CcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 34589999999999999999998887766554443332222222233444556677889999999999999889999999
Q ss_pred cchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhcCCC
Q 027956 161 FSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 214 (216)
Q Consensus 161 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 214 (216)
+|+||+++++++.++..........+.+|+|++|++++.++|+++++++++.+|
T Consensus 161 ~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~~~ 214 (215)
T PLN02395 161 VSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYSLP 214 (215)
T ss_pred cCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhcCC
Confidence 999999999988776432111112267999999999999999999999998887
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=7e-39 Score=236.30 Aligned_cols=191 Identities=18% Similarity=0.251 Sum_probs=159.8
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQG 81 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~ 81 (216)
|+||+.+.|++ ++++++|+++|++|+.+.++.. +++++|+++||.|+||+|+++|.+|+||.||++||+++++ .
T Consensus 11 ~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~--~ 85 (211)
T PRK09481 11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD---NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFP--H 85 (211)
T ss_pred eEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc---cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCC--C
Confidence 89999999999 9999999999999999999875 5678999999999999999999999999999999999997 4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCc
Q 027956 82 TELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFF 161 (216)
Q Consensus 82 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~ 161 (216)
..++|.++.++++++.|+.++...+....... . ...+...+.....+...+..+|++|++++|++|+++
T Consensus 86 ~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~ 154 (211)
T PRK09481 86 PPLMPVYPVARGESRLMMHRIEKDWYSLMNKI-----V------NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEF 154 (211)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----h------cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCc
Confidence 56889999999999999987765443322111 0 112334456677888999999999998999999999
Q ss_pred chhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 162 SLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 162 t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
|+||+++++.+.+....... +....+|+|++|++++.+||++++++..
T Consensus 155 t~AD~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 155 SLVDCYLAPLLWRLPVLGIE-LSGPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred cHHHHHHHHHHHHHHhcCCC-CCCCCChhHHHHHHHHhccHHHHHHcCH
Confidence 99999999999877644322 2215699999999999999999998865
No 4
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=9.2e-37 Score=225.51 Aligned_cols=202 Identities=22% Similarity=0.269 Sum_probs=160.9
Q ss_pred eEEeCCC--CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcc
Q 027956 3 VKVYGPA--YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRS 79 (216)
Q Consensus 3 ~~Ly~~~--~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~ 79 (216)
++||+.+ .|++ ++++++|+++|++|+.+.++..+++...++|+++||.|+||+|+++|.+|+||.+|++||++.++.
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~ 85 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAP 85 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCC
Confidence 8999976 7999 999999999999999999999888778899999999999999999999999999999999999973
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC-CCeec
Q 027956 80 QG-TELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK-SKYLA 157 (216)
Q Consensus 80 ~~-~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~fl~ 157 (216)
.. ..++|.++.+++++++|+.+..+.+.+........ ..+.....+...+...+.+.+.++.+|++|++ ++|++
T Consensus 86 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~ 161 (214)
T PRK15113 86 PAWERIYPADLQARARARQIQAWLRSDLMPLREERPTD----VVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLF 161 (214)
T ss_pred CCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccc----hhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEee
Confidence 21 23889999999999999999987665432111000 01111122233345566788999999999975 47999
Q ss_pred CCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhcCCC
Q 027956 158 GDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 214 (216)
Q Consensus 158 G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 214 (216)
|+ +|+||+++++.+.++..... . . .|+|.+|++|+.++|+|++++++.+..
T Consensus 162 G~-~TlADi~l~~~l~~~~~~~~---~-~-~p~l~~~~~r~~~rp~~~~~~~~~~~~ 212 (214)
T PRK15113 162 GE-WCIADTDLALMLNRLVLHGD---E-V-PERLADYATFQWQRASVQRWLALSAKR 212 (214)
T ss_pred CC-ccHHHHHHHHHHHHHHHcCC---C-C-CHHHHHHHHHHhcCHHHHHHHHHhhhh
Confidence 96 99999999999887654321 1 1 299999999999999999999986543
No 5
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=1.3e-36 Score=224.89 Aligned_cols=197 Identities=26% Similarity=0.430 Sum_probs=158.1
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-----CC--EEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-----GD--FILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-----~~--~~l~es~~I~~yL~ 74 (216)
||||+.+ +++ ++|+++|+++|++|+.+.+++.+++..+++|+++||.|+||+|++ +| .+|+||.||++||+
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~ 80 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA 80 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHH
Confidence 7999887 688 999999999999999999998877777899999999999999997 44 47999999999999
Q ss_pred HhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCC
Q 027956 75 EKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK 154 (216)
Q Consensus 75 ~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~ 154 (216)
+.++ .+.|.++.+++++++|+.+....+.+.+.... .... ......+...+.....+.+.+..||++|++++
T Consensus 81 ~~~~----~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 152 (215)
T PRK13972 81 EKTG----LFLSHETRERAATLQWLFWQVGGLGPMLGQNH---HFNH-AAPQTIPYAIERYQVETQRLYHVLNKRLENSP 152 (215)
T ss_pred HhcC----CCCCCCHHHHHHHHHHHHHHhhccCcceeeee---eeec-cCCCCCchHHHHHHHHHHHHHHHHHHHhccCc
Confidence 9984 26788899999999999998877765432110 0000 01112334455566778999999999999889
Q ss_pred eecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 155 YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 155 fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
|++|+++|+||+++++.+....... .....||+|.+|++++.++|++++++.+.
T Consensus 153 ~l~Gd~~t~ADi~l~~~~~~~~~~~---~~~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 153 WLGGENYSIADIACWPWVNAWTRQR---IDLAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred cccCCCCCHHHHHHHHHHHHHhhcC---CcchhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 9999999999999988775443221 22267999999999999999999998763
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=3.5e-36 Score=220.67 Aligned_cols=195 Identities=23% Similarity=0.352 Sum_probs=158.8
Q ss_pred eEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCCC-CCChhhhhhCCCCCCCeeE-eCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGE-QRSPEYLKLQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~~P~l~-~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|+||+.+.|+.++++++|+++|++|+.+.++..+++ ..+++|+++||.|+||+|+ ++|.+|+||.+|++||++.++.
T Consensus 1 m~l~~~~~s~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~- 79 (201)
T PRK10542 1 MKLFYKPGACSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD- 79 (201)
T ss_pred CceeecccHHHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc-
Confidence 589998877449999999999999999999887553 4568999999999999998 5788999999999999999973
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCC
Q 027956 81 GTELL-GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGD 159 (216)
Q Consensus 81 ~~~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~ 159 (216)
..++ |.++.+++++++|+.+..+.+.+.+...+ .....+...+.....+.+.++.+|+.|++++|++|+
T Consensus 80 -~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~ 149 (201)
T PRK10542 80 -RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLF---------RPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQ 149 (201)
T ss_pred -cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhcc---------CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCC
Confidence 3344 66788999999999988777665432221 111223334556778999999999999988999999
Q ss_pred CcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 160 FFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 160 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
++|+||+++++.+.+....... . ..+|+|.+|++++.++|++++++++.
T Consensus 150 ~~s~ADi~l~~~~~~~~~~~~~--~-~~~p~l~~w~~~~~~~p~~k~~~~~~ 198 (201)
T PRK10542 150 RFTIADAYLFTVLRWAYAVKLN--L-EGLEHIAAYMQRVAERPAVAAALKAE 198 (201)
T ss_pred CCcHHhHHHHHHHHHhhccCCC--c-ccchHHHHHHHHHHcCHHHHHHHHHc
Confidence 9999999999998887544321 2 67999999999999999999999874
No 7
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-35 Score=214.36 Aligned_cols=194 Identities=22% Similarity=0.282 Sum_probs=165.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhC-CCCCCCeeEeCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQ-PFGELPVIQDGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
++||++..||| +|++++|++|||+|+.+.++.. ++++.+++.| +.++||||+++|..|+||..|++||++++++
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~---~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~- 85 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT---NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPS- 85 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEEecCCC---CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccC-
Confidence 79999999999 9999999999999999999987 5899999999 7899999999999999999999999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc-CCCeecCC
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS-KSKYLAGD 159 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~-~~~fl~G~ 159 (216)
+++++|.||.+|++.+-|+++++..+......... .......+...+.+...|..||+.|+ +++|+.|+
T Consensus 86 ~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~----------~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~ 155 (231)
T KOG0406|consen 86 GPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVA----------AKGGEEQEAAKEELREALKVLEEELGKGKDFFGGE 155 (231)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHh----------hcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 67799999999999999999999877654444321 12334455667788999999999999 78999999
Q ss_pred CcchhhhcchhhhhhhcCCCC-----cccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 160 FFSLADLSHIPFTHYLVGPMG-----RQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 160 ~~t~aD~~l~~~l~~~~~~~~-----~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
++++.|+++++.+........ .....+.+|+|.+|.+||.++++|++++.+
T Consensus 156 ~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~ 211 (231)
T KOG0406|consen 156 TIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPD 211 (231)
T ss_pred CcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCC
Confidence 999999999977766543321 123347899999999999999999998754
No 8
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-35 Score=215.38 Aligned_cols=194 Identities=32% Similarity=0.536 Sum_probs=165.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCE-EeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDF-ILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~-~l~es~~I~~yL~~~~~~~ 80 (216)
++||+.+.||+ .|++++|.++|++|+.+.++... +.+.++|+.+||.|+||+|+++|+ +|+||.+|++||++++|.
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~- 78 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPG- 78 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCC-
Confidence 58999999999 99999999999999999999987 678899999999999999998876 899999999999999973
Q ss_pred CCCCCCCCHH---HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeec
Q 027956 81 GTELLGKTIE---ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLA 157 (216)
Q Consensus 81 ~~~l~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~ 157 (216)
+.++|.++. .++++..|+.+....+.+.+....... .... ....+...+.....+...+..+|+.|+.++|++
T Consensus 79 -~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 154 (211)
T COG0625 79 -PPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGSE--PELLEAALEAARAEIRALLALLEALLADGPYLA 154 (211)
T ss_pred -CCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-cccc--ccccHHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 228898874 888899999999988888777665544 2211 111466777888899999999999999999999
Q ss_pred CCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHH
Q 027956 158 GDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWK 205 (216)
Q Consensus 158 G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 205 (216)
|+++|+||+++++.+.+....... . +.+|++.+|++|+.++|+++
T Consensus 155 G~~~tiAD~~~~~~~~~~~~~~~~--~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 155 GDRFTIADIALAPLLWRLALLGEE--L-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CCCCCHHHHHHHHHHHHhhhcCcc--c-ccChHHHHHHHHHHcCCchh
Confidence 999999999999999886544322 2 67999999999999999954
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=5.6e-35 Score=215.68 Aligned_cols=201 Identities=26% Similarity=0.315 Sum_probs=159.9
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEccCCC-CCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccC
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVDLIK-GEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQG 81 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~ 81 (216)
+||+++.|++ +++|++|.++|++|+.+.++... ++..+++++++||.|++|+|+++|.+|+||.+|++||++.++.
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~-- 78 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD-- 78 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC--
Confidence 5899999999 99999999999999999998632 3455788999999999999999999999999999999999963
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC--CCeecCC
Q 027956 82 TELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGD 159 (216)
Q Consensus 82 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~fl~G~ 159 (216)
..++|.++.+++++++|+.++...+.+............. .+ ...+...+...+.+.+.++.||++|++ ++|++|+
T Consensus 79 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~ 156 (210)
T TIGR01262 79 PPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREK-LG-VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGD 156 (210)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCC
Confidence 4588999999999999999988766654322221111110 01 112223344556789999999999986 4699999
Q ss_pred CcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 160 FFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 160 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
++|+||+++++.+.+..... ...+.||+|++|+++|.++|++++++.+.
T Consensus 157 ~~T~ADi~~~~~l~~~~~~~---~~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 157 TPTLADLCLVPQVYNAERFG---VDLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCCHHHHHHHHHHHHHHHcC---CCcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 99999999999988765332 22277999999999999999999999774
No 10
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=1.2e-34 Score=219.91 Aligned_cols=200 Identities=24% Similarity=0.387 Sum_probs=157.5
Q ss_pred eeEEeCCCCCch-HHHHHHHHHc------CCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC----CEEeehhHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEK------EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG----DFILYESRAIM 70 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~------gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~----~~~l~es~~I~ 70 (216)
+|+||+.+ |++ ++|+++|+++ |++|+.+.++...+++..++|+++||.|+||+|+++ +.+|+||.+|+
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl 122 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAIL 122 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHH
Confidence 48999975 888 9999999997 899999999988777778999999999999999975 36899999999
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhc
Q 027956 71 RYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERL 150 (216)
Q Consensus 71 ~yL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l 150 (216)
+||++.++ .++|.++.+++++++|+.+....+ ......+.... . ......+...+.....+.+.|+.||++|
T Consensus 123 ~YL~~~~~----~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~L~~le~~L 194 (264)
T PRK11752 123 LYLAEKFG----AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFY-A--YAPEKIEYAINRFTMEAKRQLDVLDKQL 194 (264)
T ss_pred HHHHHhcC----CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHH-H--hCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999985 288999999999999999876553 21111111111 0 0111223344556677889999999999
Q ss_pred cCCCeecCCCcchhhhcchhhhhhhcCCC---C-cccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 151 SKSKYLAGDFFSLADLSHIPFTHYLVGPM---G-RQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 151 ~~~~fl~G~~~t~aD~~l~~~l~~~~~~~---~-~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
++++|++|+++|+|||++++.+.++.... . .....+.||+|++|+++|.++|++++++..
T Consensus 195 ~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~ 258 (264)
T PRK11752 195 AEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIV 258 (264)
T ss_pred ccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhc
Confidence 98899999999999999998887664311 1 111226799999999999999999999876
No 11
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-35 Score=217.34 Aligned_cols=206 Identities=39% Similarity=0.668 Sum_probs=179.1
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcc
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRS 79 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~ 79 (216)
|.++||+.+.|+. +++.+++.++|++|+.+.++...+++++++|+++||.|+||+|+|+|..++||.||+.||.++|+
T Consensus 1 ~~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~- 79 (226)
T KOG0867|consen 1 MKLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYG- 79 (226)
T ss_pred CCceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC-
Confidence 7799999999999 99999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcc-cCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeec
Q 027956 80 QGTE-LLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSS-KFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLA 157 (216)
Q Consensus 80 ~~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~ 157 (216)
.... ++|.++..++.+++|+.+..+.+.+... ......+ .++...+....+.....+...+..+|..|.++.|+.
T Consensus 80 ~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~ 156 (226)
T KOG0867|consen 80 PLGGILLPKDLKERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLA 156 (226)
T ss_pred CCCcccCCcCHHHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCccc
Confidence 4444 9999999999999999999998888643 2222233 445556778888889999999999999999999999
Q ss_pred CCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 158 GDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 158 G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
|+++|+||+.+.+.+..+...........++|++.+|++++.++|++++....
T Consensus 157 g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~ 209 (226)
T KOG0867|consen 157 GDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANEK 209 (226)
T ss_pred CCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHHH
Confidence 99999999999999998841111122337899999999999999999997765
No 12
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=4.4e-34 Score=209.65 Aligned_cols=195 Identities=19% Similarity=0.204 Sum_probs=155.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE-eCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~-~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|+||+++.|++ +++|++|+++|++|+.+.++...+ .+++.++||.|++|+|+ ++|.+++||.+|++||++.++
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~---~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~-- 75 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNA---DNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNV-- 75 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCC---chhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCC--
Confidence 58999999999 999999999999999998876533 56777889999999998 678899999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCC
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDF 160 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~ 160 (216)
+..++|.++.+++++++|+.+++..+...... +..... + .....+...+.....+.+.++.||++|++++ ++|++
T Consensus 76 ~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~-~--~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~ 150 (202)
T PRK10357 76 APAMLPRDPLAALRVRQLEALADGIMDAALVS-VREQAR-P--AAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDT 150 (202)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-c--cccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCC
Confidence 34689999999999999998877666544332 221111 1 1222344445667789999999999998778 99999
Q ss_pred cchhhhcchhhhhhhcCCCC-cccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 161 FSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 161 ~t~aD~~l~~~l~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
+|+||+++++.+.+...... .... ..+|+|++|++++.++|+++++.
T Consensus 151 ~t~ADi~l~~~l~~~~~~~~~~~~~-~~~p~l~~~~~~i~~rp~~~~~~ 198 (202)
T PRK10357 151 VNLATIAIACAVGYLNFRRVAPGWC-VDRPHLVKLVENLFQRESFARTE 198 (202)
T ss_pred cCHHHHHHHHHHHHHHhcccCcchh-hcChHHHHHHHHHhcChhhhhcC
Confidence 99999999999886643221 1122 57999999999999999999864
No 13
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-33 Score=190.63 Aligned_cols=198 Identities=22% Similarity=0.248 Sum_probs=166.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCC-CCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKG-EQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
.+||++..|.. +|||++|.++||+|+.+.|++.++ +....+|.++||-++||.|++||.+|+||.||++||++++|
T Consensus 6 piLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P-- 83 (217)
T KOG0868|consen 6 PILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYP-- 83 (217)
T ss_pred chhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCC--
Confidence 67998888888 999999999999999999998887 45567999999999999999999999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc--CCCeecC
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAG 158 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~--~~~fl~G 158 (216)
.++|+|.|+..|+.+++....+.+.+.+.-...+...... +...........-+.+.+..||+.|. .+.|.+|
T Consensus 84 ~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~e-----k~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvG 158 (217)
T KOG0868|consen 84 DPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNE-----KEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVG 158 (217)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcc-----cccchhhHHHHHHHHHhHHHHHHHHHHccCCcccC
Confidence 5779999999999999999999999888665555444422 22222234445567788999999986 4689999
Q ss_pred CCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 159 DFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 159 ~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
|+.|+||+++.+.++....+. +.+..||.+.+..+.....|+|+...-+
T Consensus 159 DevtiADl~L~pqv~nA~rf~---vdl~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 159 DEVTIADLCLPPQVYNANRFH---VDLTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred ceeehhhhccchhhhhhhhcc---ccCCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 999999999999999885433 3447899999999999999999987644
No 14
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=7.4e-32 Score=197.99 Aligned_cols=185 Identities=20% Similarity=0.272 Sum_probs=136.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhh--------hhCCCCCCCeeEeCCEEeehhHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYL--------KLQPFGELPVIQDGDFILYESRAIMRYY 73 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~--------~~~p~~~~P~l~~~~~~l~es~~I~~yL 73 (216)
++||+++.++. +++|++|+++|++|+.+.++.. .+++. .+||.|++|+|++||.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~~-----~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDKRFGEN-----GDAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEEecccc-----chHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 89999999999 9999999999999999977421 12332 4799999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCC
Q 027956 74 AEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKS 153 (216)
Q Consensus 74 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~ 153 (216)
++++| +.+.+..+++.++....... .+...+.. .... .+...+.....+.+.+..||+.|+++
T Consensus 80 a~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~l~~le~~L~~~ 142 (205)
T PTZ00057 80 SKKYK-----ICGESELNEFYADMIFCGVQ-DIHYKFNN---TNLF--------KQNETTFLNEELPKWSGYFENILKKN 142 (205)
T ss_pred HHHcC-----CCCCCHHHHHHHHHHHHHHH-HHHHHHhh---hHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99996 33445444444443332211 11111100 0000 11222345678899999999999753
Q ss_pred --CeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 154 --KYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 154 --~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
+|++|+++|+||+++++.+.++..... ...+.||+|++|++|+.++|++++++++-
T Consensus 143 ~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~--~~l~~~P~l~~~~~r~~~~P~~k~y~~~~ 200 (205)
T PTZ00057 143 HCNYFVGDNLTYADLAVFNLYDDIETKYP--NSLKNFPLLKAHNEFISNLPNIKNYISNR 200 (205)
T ss_pred CCCeeeCCcccHHHHHHHHHHHHHHHhCh--hhhccChhHHHHHHHHHhChHHHHHHHhC
Confidence 799999999999999998877653222 22278999999999999999999999874
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.98 E-value=3.4e-31 Score=195.75 Aligned_cols=180 Identities=17% Similarity=0.176 Sum_probs=137.9
Q ss_pred CCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhccc-CCCCC
Q 027956 8 PAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQ-GTELL 85 (216)
Q Consensus 8 ~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~-~~~l~ 85 (216)
.+.||+ ++++++|.++|++|+.+.+++. +++++|+++||.|++|+|+++|.+|+||.+|++||+++++.+ .+.+.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~---~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~ 92 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLK---RKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLS 92 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCC---CCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCC
Confidence 367999 9999999999999999999987 457999999999999999999999999999999999999632 13355
Q ss_pred CCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc--------------
Q 027956 86 GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS-------------- 151 (216)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~-------------- 151 (216)
|.++..++.... +...+..++ ....+...+...+.+.+.++.||++|+
T Consensus 93 p~~~~~~~~~~~--------l~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~ 154 (236)
T TIGR00862 93 PKHPESNTAGLD--------IFAKFSAYI----------KNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAED 154 (236)
T ss_pred CCCHHHHHHHHH--------HHHHHHHHH----------HcCCHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 555544443211 111111111 011223334455668889999999986
Q ss_pred ----CCCeecCCCcchhhhcchhhhhhhcCCC----CcccccCCChhHHHHHHHHhcchhHHHHHh
Q 027956 152 ----KSKYLAGDFFSLADLSHIPFTHYLVGPM----GRQHMIRDRKHVSAWWDDISNRPSWKKVLE 209 (216)
Q Consensus 152 ----~~~fl~G~~~t~aD~~l~~~l~~~~~~~----~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 209 (216)
+++|+.|+++|+|||++++.+.++.... +..++ +.+|+|.+|++++.++|+|++++.
T Consensus 155 ~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~-~~~p~l~~w~~~~~~~~sf~~t~p 219 (236)
T TIGR00862 155 EKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIP-AEFTGVWRYLSNAYAREEFTNTCP 219 (236)
T ss_pred ccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCcc-ccCchHHHHHHHHhccchHHhhCC
Confidence 5799999999999999999998887431 22334 889999999999999999999864
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.97 E-value=3.9e-31 Score=195.11 Aligned_cols=177 Identities=23% Similarity=0.259 Sum_probs=134.5
Q ss_pred CCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccCCCCC
Q 027956 7 GPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL 85 (216)
Q Consensus 7 ~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~ 85 (216)
+.+.||+ +|++++|+++|++|+.+.+++. .++++|+++||.|+||+|+++|.+|+||.+|++||+++++. ..+
T Consensus 16 ~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~--~~l- 89 (213)
T PLN02378 16 HLGDCPFSQRALLTLEEKSLTYKIHLINLS---DKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD--PPL- 89 (213)
T ss_pred CCCCCcchHHHHHHHHHcCCCCeEEEeCcc---cCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC--CCC-
Confidence 3467999 9999999999999999999986 45789999999999999999999999999999999999963 233
Q ss_pred CCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc--CCCeecCCCcch
Q 027956 86 GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSL 163 (216)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~--~~~fl~G~~~t~ 163 (216)
.++.+++++++.+. ..+..... . ... .+.....+.+.++.+|++|+ +++|++|+++|+
T Consensus 90 -~~~~~~a~i~~~~~-------~~~~~~~~----~----~~~----~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ 149 (213)
T PLN02378 90 -KTPAEFASVGSNIF-------GTFGTFLK----S----KDS----NDGSEHALLVELEALENHLKSHDGPFIAGERVSA 149 (213)
T ss_pred -CCHHHHHHHHHHHH-------HHHHHHHh----c----CCh----hhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCch
Confidence 35566666654332 11111110 0 011 11233567788999999997 468999999999
Q ss_pred hhhcchhhhhhhcCCC----CcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 164 ADLSHIPFTHYLVGPM----GRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 164 aD~~l~~~l~~~~~~~----~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
||+++++.+.++.... ..... +.||+|++|++++.++|++++++.+
T Consensus 150 ADi~l~~~~~~l~~~~~~~~~~~~~-~~~p~l~~w~~~~~~rpa~~~~~~~ 199 (213)
T PLN02378 150 VDLSLAPKLYHLQVALGHFKSWSVP-ESFPHVHNYMKTLFSLDSFEKTKTE 199 (213)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCch-hHhHHHHHHHHHHhcCCCeecccCC
Confidence 9999999987654211 11123 6799999999999999999988755
No 17
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.5e-30 Score=184.19 Aligned_cols=195 Identities=25% Similarity=0.247 Sum_probs=156.6
Q ss_pred Ce-eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhc
Q 027956 1 MV-VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 1 M~-~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~ 78 (216)
|+ ++|+|++..+. ..+|++++.+|++|+++++....+ +++.+...|+|++|+|..||..|.+|.||++||++++|
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC
Confidence 55 89999999999 999999999999999999988752 45555568999999999999999999999999999997
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHH-HHHHHHHhhHHHHHHhcc--CCCe
Q 027956 79 SQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVK-ESDEKLGKTLDVYEERLS--KSKY 155 (216)
Q Consensus 79 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~le~~l~--~~~f 155 (216)
+.+.++.+.+++|...+...+.....+........ ....+...+ .........++.+++.|. +++|
T Consensus 78 -----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~------~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgf 146 (206)
T KOG1695|consen 78 -----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPE------AGKSEEELDKLYLPAKPKYFKILEKILKKNKSGF 146 (206)
T ss_pred -----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhh------hccchhhhhhhhccchHHHHHHHHHHHHhCCCCe
Confidence 88999999999999998777654443333222111 111111111 445566778899999987 4589
Q ss_pred ecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 156 LAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 156 l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
++|+++|+||+.++..+..+......... ..+|+|+++.+++.++|.+++++++
T Consensus 147 lvGd~lT~aDl~i~e~l~~l~~~~~~~~~-~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 147 LVGDKLTWADLVIAEHLDTLEELLDPSAL-DHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred eecCcccHHHHHHHHHHHHHHHhcCchhh-ccChHHHHHHHHHhcCchHHHHHhc
Confidence 99999999999999999988774222333 6789999999999999999999987
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=9.2e-30 Score=187.85 Aligned_cols=187 Identities=16% Similarity=0.160 Sum_probs=136.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE-eCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~-~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|+||+++.||+ +|+|++|+++|++|+.+.++... . ..-...||.++||+|+ ++|.+|+||.+|++||++++++
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~--~--~~~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~- 75 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDD--E--ATPIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGK- 75 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCc--h--hhHHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCC-
Confidence 68999999999 99999999999999999885432 1 1125689999999994 7889999999999999999973
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCC---------------CCCCH---HHHHHHHHHHHhh
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFG---------------RPVDE---KLVKESDEKLGKT 142 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~ 142 (216)
+.+ +. ..++.+++|+.+....+...+...+..... +... ....+ ...+.....+.+.
T Consensus 76 -~~l-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T PRK10387 76 -PLL-TG--KRSPAIEEWLRKVFGYLNKLLYPRFAKADL-PEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINAD 150 (210)
T ss_pred -ccC-CC--cccHHHHHHHHHHHHHhhcchhcccccCCC-cccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHH
Confidence 333 31 257788999887765544332211110000 0000 00000 0113456788899
Q ss_pred HHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 143 LDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 143 l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
|+.+|++|++ +|++|+++|+||+++++.+.++..... . ..+|+|.+|++||.+||.+
T Consensus 151 l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~--~--~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 151 LRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG--I--EWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC--C--CCCHHHHHHHHHHHHHhCC
Confidence 9999999987 999999999999999999988865422 1 3469999999999999975
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.97 E-value=2.3e-29 Score=189.99 Aligned_cols=176 Identities=23% Similarity=0.307 Sum_probs=135.0
Q ss_pred CCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccCCCCCC
Q 027956 8 PAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLG 86 (216)
Q Consensus 8 ~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~p 86 (216)
...||+ ++++++|+++|++|+.+.+++. +++++|+++||.|+||+|+++|.+|+||.+|++||++.++. ..+
T Consensus 70 ~g~cp~s~rV~i~L~ekgi~ye~~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~--~~L-- 142 (265)
T PLN02817 70 LGDCPFCQRVLLTLEEKHLPYDMKLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPD--PPL-- 142 (265)
T ss_pred CCCCcHHHHHHHHHHHcCCCCEEEEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC--CCC--
Confidence 345899 9999999999999999999886 46889999999999999999999999999999999999973 334
Q ss_pred CCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC-CCeecCCCcchhh
Q 027956 87 KTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK-SKYLAGDFFSLAD 165 (216)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~fl~G~~~t~aD 165 (216)
.++.+++++++++-. .+..++ . .....+ .....+...+..||++|++ ++|++|+++|+||
T Consensus 143 ~~~~era~i~~~l~~-------~~~~~~-----~---~~~~~~----~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlAD 203 (265)
T PLN02817 143 ATPPEKASVGSKIFS-------TFIGFL-----K---SKDPGD----GTEQALLDELTSFDDYIKENGPFINGEKISAAD 203 (265)
T ss_pred CCHHHHHHHHHHHHH-------HHHHHh-----c---cCCcch----HHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHH
Confidence 356778887765421 111111 0 011111 1234567789999999974 6999999999999
Q ss_pred hcchhhhhhhcCCCC----cccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 166 LSHIPFTHYLVGPMG----RQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 166 ~~l~~~l~~~~~~~~----~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
+++++.+.++..... ..+. +.+|+|++|++++.++|+|++++..
T Consensus 204 i~l~p~L~~l~~~~~~~~~~~i~-~~~P~L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 204 LSLGPKLYHLEIALGHYKNWSVP-DSLPFVKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc-ccCHHHHHHHHHHhcchhHhhcCCC
Confidence 999999877643211 1123 6799999999999999999998653
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.95 E-value=5.5e-28 Score=177.78 Aligned_cols=186 Identities=16% Similarity=0.154 Sum_probs=131.0
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE-eCCEEeehhHHHHHHHHHhhcccC
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQG 81 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~-~~~~~l~es~~I~~yL~~~~~~~~ 81 (216)
+||+...||+ +|+|++|.++|++|+.+.++... . ....++||.|++|+|+ ++|.+++||.+|++||+++++.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~--~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~-- 74 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDD--E--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE-- 74 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCc--c--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC--
Confidence 6899999999 99999999999999998764432 2 2347899999999998 8889999999999999999963
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHH-------------Hhc-ccCCCCCC---HHHHHHHHHHHHhhHH
Q 027956 82 TELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQL-------------LFS-SKFGRPVD---EKLVKESDEKLGKTLD 144 (216)
Q Consensus 82 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~~~~~~---~~~~~~~~~~~~~~l~ 144 (216)
+.+.+ ..+.++.+|+.+....+...+...+... ... ...+.... ....+.....+.+.++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 151 (209)
T TIGR02182 75 PLLTG---KVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLE 151 (209)
T ss_pred ccCCC---CChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHH
Confidence 22322 2456778888765554432221111000 000 00000000 0001244567888999
Q ss_pred HHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCCh-hHHHHHHHHhcchhH
Q 027956 145 VYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRK-HVSAWWDDISNRPSW 204 (216)
Q Consensus 145 ~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~ 204 (216)
.+|++|++++|+.| ++|+||+++++.+.++..... ..+| +|.+|++||.+++++
T Consensus 152 ~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~-----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 152 ELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAG-----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecC-----CCCChHHHHHHHHHHHHhCC
Confidence 99999999999955 699999999999987764322 2356 999999999999875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=7.2e-27 Score=167.93 Aligned_cols=207 Identities=26% Similarity=0.335 Sum_probs=149.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQG 81 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~ 81 (216)
+.||+++.|-. +|||++++++||+|+...|++.+++...++|..+||.|.|||+++++.+|.++.-|+.|+++++-. .
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~g-e 105 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTG-E 105 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcc-c
Confidence 68999999999 999999999999999999999999999999999999999999999999999999999999999863 3
Q ss_pred CCCCCC-CHHHHHHHHHHHHHHhc-------------------ccchHHH---HHHHHHH--------h-cccCC-----
Q 027956 82 TELLGK-TIEERGLVEQWLEVEAH-------------------NYNPAIY---ELTIQLL--------F-SSKFG----- 124 (216)
Q Consensus 82 ~~l~p~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~---~~~~~~~--------~-~~~~~----- 124 (216)
..+.|. +.....++...-...+. ...|... ..+.... . .+...
T Consensus 106 r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~a 185 (325)
T KOG4420|consen 106 RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLA 185 (325)
T ss_pred ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHH
Confidence 447773 22222222222111100 0001111 0000000 0 00000
Q ss_pred ----------CCCCHHHHHHHHHHHHhhHHHHHHhccC----CCeecCCCcchhhhcchhhhhhhcCCCCcc-cc-cCCC
Q 027956 125 ----------RPVDEKLVKESDEKLGKTLDVYEERLSK----SKYLAGDFFSLADLSHIPFTHYLVGPMGRQ-HM-IRDR 188 (216)
Q Consensus 125 ----------~~~~~~~~~~~~~~~~~~l~~le~~l~~----~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~-~~-~~~~ 188 (216)
.-.+....+.....+...|...|..|.+ ..|++|+++|+||+.+...|+++...+... ++ ....
T Consensus 186 kqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsr 265 (325)
T KOG4420|consen 186 KQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSR 265 (325)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCC
Confidence 0011223334455566678888888876 589999999999999999999998877543 22 1268
Q ss_pred hhHHHHHHHHhcchhHHHHHhh
Q 027956 189 KHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 189 p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
|+|..|++|++.|+++++++.+
T Consensus 266 pnle~Yf~rvrrR~sf~kvlg~ 287 (325)
T KOG4420|consen 266 PNLESYFERVRRRFSFRKVLGD 287 (325)
T ss_pred ccHHHHHHHHHhhhHHHHhhhh
Confidence 9999999999999999999877
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.94 E-value=3.2e-25 Score=186.29 Aligned_cols=157 Identities=17% Similarity=0.221 Sum_probs=130.0
Q ss_pred CeeEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHHHHhhcc
Q 027956 1 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYYAEKYRS 79 (216)
Q Consensus 1 M~~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL~~~~~~ 79 (216)
|+++||+.+.|+..++.++|++.|++|+.+.. +|.|++|+|++ +|.+|+||.||++||++.++
T Consensus 1 ~~~kLy~~~~S~~~~v~~~L~~lgv~~e~~~~---------------~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p- 64 (722)
T PLN02907 1 MEAKLSFPPDSPPLAVIAAAKVAGVPLTIDPS---------------LKSGSAPTLLFSSGEKLTGTNVLLRYIARSAS- 64 (722)
T ss_pred CeEEEEECCCCChHHHHHHHHHcCCCcEEeec---------------CCCCCCcEEEECCCCEEECHHHHHHHHHHhCC-
Confidence 88999999999887799999999999998641 58999999994 78899999999999999986
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCC
Q 027956 80 QGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGD 159 (216)
Q Consensus 80 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~ 159 (216)
...|+|.++.+++++++|+.++..... ...+...++.||++|++++|++|+
T Consensus 65 -~~~L~p~d~~erAqV~qWL~~~~~~~~----------------------------~~~l~~~L~~LE~~L~~rtYLvGd 115 (722)
T PLN02907 65 -LPGFYGQDAFESSQVDEWLDYAPTFSS----------------------------GSEFENACEYVDGYLASRTFLVGY 115 (722)
T ss_pred -CcCCCCCCHHHHHHHHHHHHHHhhccc----------------------------HHHHHHHHHHHHHHhccCCeecCC
Confidence 455889999999999999998754210 013456789999999999999999
Q ss_pred CcchhhhcchhhhhhhcC-CCCcccccCCChhHHHHHHHHhcchh
Q 027956 160 FFSLADLSHIPFTHYLVG-PMGRQHMIRDRKHVSAWWDDISNRPS 203 (216)
Q Consensus 160 ~~t~aD~~l~~~l~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~ 203 (216)
++|+||+++++.+..... ....... ..||+|.+|++++.++|+
T Consensus 116 ~lTLADIaL~~~L~~~~~~~~~~~~~-~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 116 SLTIADIAIWSGLAGSGQRWESLRKS-KKYQNLVRWFNSISAEYS 159 (722)
T ss_pred CCCHHHHHHHHHHHhhhhhhhccccc-ccCHHHHHHHHHHHhCCC
Confidence 999999999988865411 1111122 679999999999999999
No 23
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.85 E-value=3e-20 Score=130.30 Aligned_cols=178 Identities=19% Similarity=0.247 Sum_probs=136.2
Q ss_pred CCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccCCCCCC
Q 027956 8 PAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLG 86 (216)
Q Consensus 8 ~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~p 86 (216)
...||+ +++.+.|+++|++|+++.|++. .++++|+.+.|.+++|+|..++..++||..|-++|+++++.+ . ++
T Consensus 18 ~Gdcpf~qr~~m~L~~k~~~f~vttVd~~---~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p--~-~~ 91 (221)
T KOG1422|consen 18 LGDCPFCQRLFMTLELKGVPFKVTTVDLS---RKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPP--K-LP 91 (221)
T ss_pred CCCChhHHHHHHHHHHcCCCceEEEeecC---CCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCC--C-Cc
Confidence 457999 9999999999999999999998 678999999999999999999999999999999999999732 2 22
Q ss_pred C-CHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC---CCeecCCCcc
Q 027956 87 K-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK---SKYLAGDFFS 162 (216)
Q Consensus 87 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~---~~fl~G~~~t 162 (216)
. ++.+.+-+ ...+...+..++ .+..++..+.....+...|+.|+++|+. ++|+.|+++|
T Consensus 92 ~~~~~E~asa-------g~diF~kF~~fi----------~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt 154 (221)
T KOG1422|consen 92 TLAPPESASA-------GSDIFAKFSAFI----------KKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLT 154 (221)
T ss_pred ccCCHHHHhh-------HHHHHHHHHHHH----------hCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeee
Confidence 2 12122111 111222122221 1223334445567788888999999984 6899999999
Q ss_pred hhhhcchhhhhhhcCCCC----cccccCCChhHHHHHHHHhcchhHHHHHh
Q 027956 163 LADLSHIPFTHYLVGPMG----RQHMIRDRKHVSAWWDDISNRPSWKKVLE 209 (216)
Q Consensus 163 ~aD~~l~~~l~~~~~~~~----~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 209 (216)
.||+.+.+-|+.+..+.+ ..++ +.++++++|+..+.++.++..+.-
T Consensus 155 ~aDcsLlPKL~~i~va~k~yk~~~IP-~~lt~V~rYl~~~ya~d~F~~tcp 204 (221)
T KOG1422|consen 155 LADCSLLPKLHHIKVAAKHYKNFEIP-ASLTGVWRYLKNAYARDEFTNTCP 204 (221)
T ss_pred eehhhhchhHHHHHHHHHHhcCCCCc-hhhhHHHHHHHHHHhHHHhhcCCc
Confidence 999999999998876543 2356 789999999999999999877653
No 24
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.84 E-value=1e-20 Score=115.43 Aligned_cols=72 Identities=29% Similarity=0.517 Sum_probs=68.0
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||+++.|++ +++|++|+++|++|+.+.++...++.++++|.++||.|++|+|+++|.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999 9999999999999999999988777778899999999999999999999999999999985
No 25
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.82 E-value=8.3e-20 Score=112.27 Aligned_cols=73 Identities=36% Similarity=0.636 Sum_probs=68.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
|+||+.+.|++ ++++++|+++|++|+.+.++...++...+++.++||.+++|+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999 99999999999999999999877767789999999999999999999999999999999974
No 26
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.82 E-value=1.4e-19 Score=111.81 Aligned_cols=75 Identities=48% Similarity=0.836 Sum_probs=69.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
++||+.+.|++ ++++++|+++|++|+.+.++...++...+++.++||.+++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 58999999999 9999999999999999999987766667899999999999999999999999999999999864
No 27
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.81 E-value=1.6e-19 Score=111.62 Aligned_cols=75 Identities=57% Similarity=1.026 Sum_probs=69.6
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
+++||+.+.|++ +++|++|+++|++|+.+.++...++.++++|.++||.+++|+|+++|..++||.+|++||+++
T Consensus 1 ~~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 1 VLKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred CeEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 379999999999 999999999999999999988766667889999999999999999999999999999999863
No 28
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.81 E-value=1.9e-19 Score=110.89 Aligned_cols=73 Identities=45% Similarity=0.829 Sum_probs=65.9
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCC-CCCCeeEeC-CEEeehhHHHHHHHHH
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPF-GELPVIQDG-DFILYESRAIMRYYAE 75 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~~P~l~~~-~~~l~es~~I~~yL~~ 75 (216)
|+++||+.+. + .++|++|+++|++|+.+.++...++.++++|++.||. |++|+|+++ |.+++||.||++||++
T Consensus 1 ~~l~l~~~~~--~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRG--RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSST--TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCC--chHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 6778887777 6 9999999999999999999998888778999999999 999999999 9999999999999985
No 29
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.81 E-value=2.2e-19 Score=112.25 Aligned_cols=75 Identities=40% Similarity=0.698 Sum_probs=69.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC---CEEeehhHHHHHHHHHhhc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG---DFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~---~~~l~es~~I~~yL~~~~~ 78 (216)
++||+.+. ++ ++++++|+++|++|+.+.++...++..+++|+++||.+++|+|+++ |.+|+||.+|++||+++++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 79999986 88 9999999999999999999887666778999999999999999987 7899999999999999985
No 30
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.80 E-value=3.2e-19 Score=109.75 Aligned_cols=71 Identities=42% Similarity=0.701 Sum_probs=67.3
Q ss_pred EeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhc
Q 027956 5 VYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 5 Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~ 78 (216)
||+.+.||+ +|+|++|+++|++|+.+.++.. .+.+++..+||.+++|+|+++|.+++||.+|++||+++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~---~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~ 72 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPE---EKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYP 72 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTT---STSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHST
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcc---cchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcC
Confidence 899999999 9999999999999999999866 3478999999999999999999999999999999999996
No 31
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.79 E-value=6.2e-19 Score=108.07 Aligned_cols=72 Identities=33% Similarity=0.615 Sum_probs=67.0
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
|+||+.+.||+ ++++++|+++|++|+.+.++.. +..++++++||.|++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 68999999999 9999999999999999998865 457899999999999999999999999999999999864
No 32
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.79 E-value=5e-19 Score=108.38 Aligned_cols=72 Identities=35% Similarity=0.678 Sum_probs=66.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||+.+.|++ +++|++|+++|++|+.+.++...++.+.++++++||.+++|+|+++|.+|+||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 58999999999 9999999999999999998876555668899999999999999999999999999999984
No 33
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.79 E-value=7.9e-19 Score=108.70 Aligned_cols=76 Identities=32% Similarity=0.441 Sum_probs=68.5
Q ss_pred eEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHHHHhhc
Q 027956 3 VKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 3 ~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL~~~~~ 78 (216)
|+||+.+.++.+++|++|+++|++|+.+.++..+++.++++++++||.+++|+|+++ |..++||.+|++||++.++
T Consensus 1 ~~Ly~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGACSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCCchHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999865339999999999999999999988777778999999999999999987 7899999999999999873
No 34
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.79 E-value=6.3e-19 Score=108.03 Aligned_cols=72 Identities=43% Similarity=0.665 Sum_probs=67.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||+.+.|++ ++++++|+++|++|+.+.++...++.+++++.++||.+++|+|+++|.+++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999 9999999999999999999887666778999999999999999999999999999999984
No 35
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.79 E-value=1.1e-18 Score=107.84 Aligned_cols=75 Identities=43% Similarity=0.681 Sum_probs=68.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~ 78 (216)
|+||+++. ++ ++++++|+++|++|+.+.++...++.++++++++||.+++|+|+++|.+++||.+|++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999886 57 99999999999999999998876667789999999999999999999999999999999999873
No 36
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.78 E-value=1.6e-18 Score=106.39 Aligned_cols=72 Identities=29% Similarity=0.371 Sum_probs=66.1
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCC-CCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPF-GELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
|+||+.+.||+ +++|++|+++|++|+.+.++.. .+.++++++||. +++|+|+++|.+++||.+|++||++.+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 68999999999 9999999999999999988765 457889999995 999999999999999999999999864
No 37
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.78 E-value=1.1e-18 Score=107.81 Aligned_cols=73 Identities=21% Similarity=0.332 Sum_probs=64.8
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe--CCEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD--GDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~--~~~~l~es~~I~~yL~~~~ 77 (216)
++||+.+.||+ +|++++|.++|++|+.+.++. ++...+++++.||.+++|+|++ +|.+++||.+|++||++++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~--~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPK--GSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCC--ChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 89999999999 999999999999999988853 2334678999999999999997 3689999999999999874
No 38
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.78 E-value=1.7e-18 Score=106.09 Aligned_cols=72 Identities=38% Similarity=0.580 Sum_probs=67.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
|+||+++.|++ +++|++|+++|++|+.+.+++..++...++++++||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999 9999999999999999999987666778999999999999999999999999999999985
No 39
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.77 E-value=1.9e-18 Score=108.43 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=63.3
Q ss_pred CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhc
Q 027956 9 AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 9 ~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~ 78 (216)
..||+ +++|++|+++|++|+.+.+++. +++++|+++||.|++|+|+++|.+|+||.+|++||++.++
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~---~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~ 87 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK---RKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLC 87 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC---CCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHcc
Confidence 57899 9999999999999999999987 5689999999999999999999999999999999999985
No 40
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.77 E-value=2.8e-18 Score=105.57 Aligned_cols=71 Identities=27% Similarity=0.460 Sum_probs=65.8
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHHHH
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYYAE 75 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL~~ 75 (216)
+||+++.|++ ++++++|+++|++|+.+.++...+ +++++|+++||.+++|+|++ +|.+++||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 7999999999 999999999999999999998654 67889999999999999997 58899999999999986
No 41
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.77 E-value=1.3e-18 Score=106.47 Aligned_cols=71 Identities=24% Similarity=0.313 Sum_probs=64.7
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
+++||+++.|++ +++|++|+++|++|+.+.++.. ...++++.+||.+++|+|+++|.+++||.+|++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 479999999999 9999999999999999999763 2345788999999999999999999999999999986
No 42
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.76 E-value=2.9e-18 Score=105.34 Aligned_cols=72 Identities=43% Similarity=0.659 Sum_probs=66.1
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL~ 74 (216)
|+||+.+.|++ +++|++|+++|++|+.+.++...++...+++.++||.+++|+|++ +|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999999 999999999999999999988766666789999999999999995 7789999999999985
No 43
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.74 E-value=4e-18 Score=104.11 Aligned_cols=71 Identities=27% Similarity=0.353 Sum_probs=63.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
++||+++.|++ +++|++|+++|++|+.+.++...+ ..+++..+||.+++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999 999999999999999999886533 234588999999999999999999999999999974
No 44
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.74 E-value=1.3e-17 Score=101.51 Aligned_cols=67 Identities=28% Similarity=0.371 Sum_probs=62.2
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHH
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYY 73 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL 73 (216)
+||+.+.||+ +|++++|+++|++|+.+.++.. .++++++++||.+++|+|+++ |.+++||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~---~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELK---NKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC---CCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999 9999999999999999999876 346899999999999999985 88999999999997
No 45
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.73 E-value=3.6e-17 Score=109.70 Aligned_cols=117 Identities=57% Similarity=1.017 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++.+|+.+....+.+.+..........+..+...++...+.....+.+.++.||++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 57889999999998888877665444333333334456666667788999999999999998999999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
.+.++......... +.+|+|++|++++.++|++++++
T Consensus 82 ~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPFAKLF-DSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccchhhh-hcCchHHHHHHHHHhCHHHHhhC
Confidence 98877542221123 67999999999999999998763
No 46
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.73 E-value=2.6e-16 Score=114.49 Aligned_cols=177 Identities=19% Similarity=0.210 Sum_probs=125.0
Q ss_pred CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccCCCCCCCC
Q 027956 10 YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKT 88 (216)
Q Consensus 10 ~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~p~~ 88 (216)
.||+ .|+-..|+..+|||+.+.-.+. ..+..|++|.++-||..+.+|.-|...|.++++.+.. + .
T Consensus 60 LSPfClKvEt~lR~~~IpYE~~~~~~~----------~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~--L--~ 125 (281)
T KOG4244|consen 60 LSPFCLKVETFLRAYDIPYEIVDCSLK----------RRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDD--L--S 125 (281)
T ss_pred CChHHHHHHHHHHHhCCCceeccccce----------eeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCC--C--C
Confidence 6899 9999999999999999866442 2378899999999999999999999999999963211 2 3
Q ss_pred HHHHHHHHHHHHHHhcccchHHHH----------------------------HHHHHHhc-----ccCCCCCCHHHHHHH
Q 027956 89 IEERGLVEQWLEVEAHNYNPAIYE----------------------------LTIQLLFS-----SKFGRPVDEKLVKES 135 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~-----~~~~~~~~~~~~~~~ 135 (216)
++++++.......++..+...+.. +++..... ...+. ...-..++.
T Consensus 126 ~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~-IG~f~~~Ei 204 (281)
T KOG4244|consen 126 AEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA-IGDFESAEI 204 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc-ccCcCHHHH
Confidence 445555555555554433322211 11111110 00011 111223345
Q ss_pred HHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCc---ccccCCChhHHHHHHHHhcc
Q 027956 136 DEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR---QHMIRDRKHVSAWWDDISNR 201 (216)
Q Consensus 136 ~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~ 201 (216)
.+-+.+.++.++..|++++|+.|+++|-+|+.+|+.|..+...... .+....+|+|.+|++|+++.
T Consensus 205 ~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 205 DELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999998873221 13347799999999999763
No 47
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.72 E-value=2.8e-17 Score=102.61 Aligned_cols=74 Identities=26% Similarity=0.256 Sum_probs=63.2
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCC-Chhhhh-----hCCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQR-SPEYLK-----LQPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~-~~~~~~-----~~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
+||++..++. +++|++|+++|++|+.+.+++.+++.. .+++.. .+|.++||+|+++|.+++||.||++||+++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~ 81 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARK 81 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhc
Confidence 7999999999 999999999999999999998765432 345542 229999999999999999999999999986
Q ss_pred h
Q 027956 77 Y 77 (216)
Q Consensus 77 ~ 77 (216)
+
T Consensus 82 ~ 82 (82)
T cd03075 82 H 82 (82)
T ss_pred C
Confidence 4
No 48
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.72 E-value=3.3e-17 Score=104.01 Aligned_cols=70 Identities=24% Similarity=0.502 Sum_probs=64.0
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYYA 74 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL~ 74 (216)
+++||+.+.||+ ++++++|+++|++|+.+.++... ..+++.+.||.+++|+|+++ |..++||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~---~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD---KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC---CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 489999999999 99999999999999999998753 35779999999999999986 899999999999985
No 49
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.71 E-value=3.6e-17 Score=100.13 Aligned_cols=69 Identities=22% Similarity=0.323 Sum_probs=62.8
Q ss_pred eEEeCCCCCch-HHHHHHHHH--cCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVE--KEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~--~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL~ 74 (216)
++||+.+.|++ +++|++|++ +|++|+.+.++.. .+.+++++.||.+++|+|++ +|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW---SDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc---cCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 58999999999 999999999 8899999999854 45789999999999999984 7889999999999985
No 50
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.71 E-value=4.4e-17 Score=99.16 Aligned_cols=69 Identities=14% Similarity=0.175 Sum_probs=60.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL~~ 75 (216)
|+||+++.||+ +|+|++|.++|++|+.+.++... .....+.+|.+++|+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 58999999999 99999999999999999887432 2344678999999999976 8899999999999974
No 51
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.70 E-value=6.3e-17 Score=107.79 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhh
Q 027956 87 KTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADL 166 (216)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~ 166 (216)
.++..++++++|+.+.+..+.+.+....+..... . ...+.....+.+.++.+|+.|++++|++|+++|+||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi 73 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYP----E----ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADW 73 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcC----c----ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHH
Confidence 4688999999999999999888776655443221 1 1355667889999999999999999999999999999
Q ss_pred cchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHH
Q 027956 167 SHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 207 (216)
Q Consensus 167 ~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 207 (216)
++++.+.++............+|+|++|++++.++|+++++
T Consensus 74 ~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 74 AIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 99988766543211122227799999999999999999985
No 52
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.70 E-value=8e-17 Score=97.51 Aligned_cols=67 Identities=40% Similarity=0.671 Sum_probs=57.3
Q ss_pred CCch-HHHHHHHHHcCCceeEEEccC-CCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHHHHh
Q 027956 10 YASP-KRVILCLVEKEIEFETVPVDL-IKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYYAEK 76 (216)
Q Consensus 10 ~s~~-~~v~~~L~~~gi~~~~~~v~~-~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL~~~ 76 (216)
.||| +|++++|+++|++|+...+.. ..+..++++|.++||.++||+|++ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 5899 999999999999999988843 334466789999999999999997 789999999999999874
No 53
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.70 E-value=1e-16 Score=99.45 Aligned_cols=70 Identities=23% Similarity=0.298 Sum_probs=60.8
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhh-----CCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKL-----QPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~-----~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
++||+++.++. ++++++|+++|++|+.+.++.. +++.+. .|.+++|+|+++|.+|+||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 58999999999 9999999999999999988753 233333 36899999999999999999999999999
Q ss_pred hc
Q 027956 77 YR 78 (216)
Q Consensus 77 ~~ 78 (216)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 85
No 54
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.69 E-value=1e-16 Score=100.77 Aligned_cols=69 Identities=32% Similarity=0.422 Sum_probs=60.2
Q ss_pred CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHHHHhhc
Q 027956 9 AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 9 ~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL~~~~~ 78 (216)
+.|++ +|+|++|.++|++|+.+.++...++...+++ ++||.+++|+|+++ |.+++||.+|++||+++++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 67999 9999999999999999999876544434455 78999999999998 8999999999999999873
No 55
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.68 E-value=2.3e-16 Score=96.91 Aligned_cols=66 Identities=26% Similarity=0.278 Sum_probs=59.8
Q ss_pred eEEeCCC-------CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPA-------YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~-------~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||+++ .||+ ++++++|+++|++|+.+.++.. +++|.+++|+|+++|.+++||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~----------~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA----------KRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc----------cCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 6899998 6899 9999999999999999887542 56899999999999999999999999999
Q ss_pred Hhhc
Q 027956 75 EKYR 78 (216)
Q Consensus 75 ~~~~ 78 (216)
++++
T Consensus 72 ~~~~ 75 (75)
T cd03080 72 EKYG 75 (75)
T ss_pred HHcC
Confidence 9874
No 56
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.68 E-value=3.7e-16 Score=103.93 Aligned_cols=112 Identities=25% Similarity=0.347 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++|+.+....+.+.+...+......+ ...+...+....++.+.++.+|+.|++++|++|+++|+||+++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 76 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAP----EKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFP 76 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCC----CCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHH
Confidence 3688999999999999987665433322221 233455667788899999999999998899999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
.+.+....... .. ..+|++.+|++++.++|++++++
T Consensus 77 ~~~~~~~~~~~-~~-~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 77 WVRRLEWIGID-DL-DDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHhcccc-ch-hhchHHHHHHHHHhhCHHHHHhc
Confidence 99887654322 23 67999999999999999999875
No 57
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.67 E-value=3.7e-16 Score=114.36 Aligned_cols=192 Identities=16% Similarity=0.212 Sum_probs=124.2
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQG 81 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~ 81 (216)
++||.+..||+ -|||.+|.+.|+||++++|++.. ..+ .+-+.+.+||+|...|..+.||.+|+.-|.-..-+++
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~----r~e-Ik~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVL----RQE-IKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEEEecchh----hhh-ccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 78999999999 99999999999999999998762 222 2345789999999878789999999988744331110
Q ss_pred C------CCCC-----------------------------CCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhccc----
Q 027956 82 T------ELLG-----------------------------KTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK---- 122 (216)
Q Consensus 82 ~------~l~p-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 122 (216)
. .++| .+-+.+..-..|-.|+++.+--.+...++.......
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFe 245 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFE 245 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHH
Confidence 0 0222 111223355667777766554333333222111000
Q ss_pred -C---CC---C------------------------CCHHHHHHHHHHHHhhHHHHHHhcc-CCCeecCCCcchhhhcchh
Q 027956 123 -F---GR---P------------------------VDEKLVKESDEKLGKTLDVYEERLS-KSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 123 -~---~~---~------------------------~~~~~~~~~~~~~~~~l~~le~~l~-~~~fl~G~~~t~aD~~l~~ 170 (216)
+ +. . .........++.+-..++.+-..|+ +++|+.|++|++||..+++
T Consensus 246 wf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfG 325 (370)
T KOG3029|consen 246 WFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFG 325 (370)
T ss_pred HHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhh
Confidence 0 00 0 0011111234455566666777774 6799999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhc
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (216)
++..+..+....-. -...++.+|+-+|++
T Consensus 326 vl~sm~gc~afkd~-~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 326 VLRSMEGCQAFKDC-LQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhHhhhhhHHHHH-HhcchHHHHHHHHHH
Confidence 99988766532211 346789999999975
No 58
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=4e-16 Score=95.28 Aligned_cols=68 Identities=32% Similarity=0.486 Sum_probs=61.4
Q ss_pred eCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 6 YGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 6 y~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
-+...|++ ++++++|+++|++|+.+.++...+ ...++|+++||.+++|+|+++|.+++||.+|++||+
T Consensus 5 ~~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 5 GNKNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred cCCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 35678999 999999999999999999987654 356899999999999999999999999999999984
No 59
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.67 E-value=4.4e-16 Score=96.28 Aligned_cols=71 Identities=18% Similarity=0.252 Sum_probs=61.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC----CEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG----DFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~----~~~l~es~~I~~yL~~~~ 77 (216)
++||+.+.||+ +++|++|.++|++|+.+.++... .++ ...+|.+++|+|+++ |.+++||.+|++||+++.
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 78999999999 99999999999999999886541 223 467999999999965 689999999999999975
Q ss_pred c
Q 027956 78 R 78 (216)
Q Consensus 78 ~ 78 (216)
|
T Consensus 77 ~ 77 (77)
T cd03040 77 G 77 (77)
T ss_pred C
Confidence 3
No 60
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.66 E-value=2.8e-16 Score=104.66 Aligned_cols=113 Identities=22% Similarity=0.354 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++|+.+..+.+.+.+..........+ .....+...+.....+.+.+..+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWAT--DEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhccccccccc--ChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHH
Confidence 4789999999999998887654432211000 01122445566778899999999999998899999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
.+.++..... .. +.+|+|.+|++++.++|++++++
T Consensus 80 ~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWAPGVGL--DL-SDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHhhcCC--Ch-hhChHHHHHHHHHHhCHHhHhhC
Confidence 9887654322 12 57999999999999999999863
No 61
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.65 E-value=9.6e-16 Score=105.94 Aligned_cols=110 Identities=21% Similarity=0.260 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcch
Q 027956 90 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~ 169 (216)
+.++++++|++|....+.+...... ...+++..+.....+...++.||++|++++|++|+++|+||++++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~ 72 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAG----------FATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLF 72 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHh----------hccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHH
Confidence 3688899999999988877643221 123455566777889999999999999899999999999999999
Q ss_pred hhhhhhcCCC------CcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 170 PFTHYLVGPM------GRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 170 ~~l~~~~~~~------~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
+.+.++.... ..... ..||+|.+|++++.++|++++++..
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~~-~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 73 TTLIRFDAVYVQHFKCNLKRI-RDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHHHhhhhcccccchh-hhCchHHHHHHHHhcCchHhhhcCH
Confidence 9987653211 01122 5799999999999999999998865
No 62
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.64 E-value=1.5e-15 Score=99.96 Aligned_cols=105 Identities=15% Similarity=0.219 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcch
Q 027956 90 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~ 169 (216)
.++++++.|+.++.+.+.+.+..... + .+...+.....+.+.+..+|++|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 70 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK-----G------RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALA 70 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-----C------cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHH
Confidence 47899999999999888776644431 1 134455677889999999999999999999999999999999
Q ss_pred hhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHH
Q 027956 170 PFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 207 (216)
Q Consensus 170 ~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 207 (216)
+.+......+. .+. ..+|+|++|++++.+||+++++
T Consensus 71 ~~~~~~~~~~~-~~~-~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 71 PLLWRLPALGI-ELP-KQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHcCC-CCc-ccchHHHHHHHHHHCCHHHHHh
Confidence 99865542221 233 5799999999999999999875
No 63
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=3.6e-15 Score=102.02 Aligned_cols=187 Identities=17% Similarity=0.166 Sum_probs=128.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE-eCCEEeehhHHHHHHHHHhhccc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~-~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|+||-+.-||| .|+|+++..+|||++......... +.=..+-...+||+|+ ++|..+.||..|.+|+++..+.
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe----~Tp~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~- 75 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDE----ETPIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGK- 75 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcc----cChhhhhcccccceEEccccccchhhhHHHHHHHHhcCc-
Confidence 68999999999 999999999999999988765422 2223445677899999 6788999999999999999862
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCC------------------CCHHHHHHHHHHHHhh
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP------------------VDEKLVKESDEKLGKT 142 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~ 142 (216)
++.- ...+..+..|++-+...........+....+ +.|..+ ..-........++..+
T Consensus 76 --~~lt--~~~~pai~~wlrkv~~y~nkll~PR~~k~~l-~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~d 150 (215)
T COG2999 76 --PLLT--GKVRPAIEAWLRKVNGYLNKLLLPRFAKSAL-PEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQAD 150 (215)
T ss_pred --hhhc--cCcCHHHHHHHHHhcchHhhhhhhhHhhcCC-ccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHH
Confidence 2222 2234567777775554433322222211111 111110 0112344567788889
Q ss_pred HHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 143 LDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 143 l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
++.+++++.+..-+ ...++.-|+.+|+.|+.+..+.+-.++ .++..|..+|.+...+
T Consensus 151 l~~l~~Li~~~s~~-n~~l~~ddi~vFplLRnlt~v~gi~wp----s~v~dy~~~msektqV 207 (215)
T COG2999 151 LRALDKLIVGPSAV-NGELSEDDILVFPLLRNLTLVAGIQWP----SRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHhcCcchh-ccccchhhhhhhHHhccceecccCCCc----HHHHHHHHHHHHhhCc
Confidence 99999998765533 346999999999999998776554333 5899999999876554
No 64
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.63 E-value=3.5e-15 Score=101.19 Aligned_cols=118 Identities=25% Similarity=0.378 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHhcccC-CCCCCHHHHHHHHHHHHhhHHHHHHh-ccCCCeecCCCcchhhhcch
Q 027956 92 RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEER-LSKSKYLAGDFFSLADLSHI 169 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~-l~~~~fl~G~~~t~aD~~l~ 169 (216)
++++++|+.+....+.+.+...+......+.+ +....+...+...+.+.+.+..+|++ +++++|++|+++|+||++++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 46789999999888876655433332222222 23345666777888999999999997 55578999999999999999
Q ss_pred hhhhhhcCCCCcccccCCChhHHHHHHHHhc--chhHHHHHhhc
Q 027956 170 PFTHYLVGPMGRQHMIRDRKHVSAWWDDISN--RPSWKKVLELC 211 (216)
Q Consensus 170 ~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~~~~ 211 (216)
+.+.+...... ... ..+|+|.+|++++.+ +|+++++.+-.
T Consensus 82 ~~~~~~~~~~~-~~~-~~~p~l~~w~~~~~~~~~p~~~~~~~~~ 123 (126)
T cd03183 82 CEIMQPEAAGY-DVF-EGRPKLAAWRKRVKEAGNPLFDEAHKII 123 (126)
T ss_pred HHHHHHHhcCC-ccc-ccCchHHHHHHHHHHhcchhHHHHHHHH
Confidence 88877654332 223 789999999999999 99999987654
No 65
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.63 E-value=1.7e-15 Score=102.77 Aligned_cols=110 Identities=19% Similarity=0.241 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcch
Q 027956 90 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 169 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~ 169 (216)
.+++++++|+.+....+.+.+...+.. .+...+.....+.+.++.+|++|++++|++|+++|+||++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~ 70 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-----------KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALG 70 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-----------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHH
Confidence 468899999999998888776544321 133445667889999999999999889999999999999999
Q ss_pred hhhhhhcCC---CCcc-cccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 170 PFTHYLVGP---MGRQ-HMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 170 ~~l~~~~~~---~~~~-~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
+.+.++... .... ...+.+|++.+|++++.++|++++++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 115 (126)
T cd03185 71 SFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPD 115 (126)
T ss_pred HHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCC
Confidence 988876432 1111 1126799999999999999999998765
No 66
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.62 E-value=3.9e-15 Score=99.62 Aligned_cols=115 Identities=23% Similarity=0.235 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHHhcccchHHHHHHHHHHhccc--CCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhh
Q 027956 88 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK--FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLAD 165 (216)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD 165 (216)
|+..++++++|+.+++..+.+.+...+........ .....++...+.....+.+.+..||+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 46689999999999988887766655432211110 0123456677788889999999999999988999999999999
Q ss_pred hcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 166 LSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 166 ~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
+++++.+.+....+. .+. ..+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~~-~~~-~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKL-RVP-EELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCC-CCc-cccHHHHHHHHHHHhccCC
Confidence 999999988765432 233 6799999999999999974
No 67
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.62 E-value=5.9e-15 Score=97.60 Aligned_cols=109 Identities=21% Similarity=0.338 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++|+.+..+.+.+.+...+......+ .....+...+.....+.+.++.+|++|++++|++|+++|+||+++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTP--PEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCC--cccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHH
Confidence 4788999999999999988766544332211 22344556667788999999999999998899999999999999998
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
++....... ... ..+|+|++|++++.++|++
T Consensus 80 ~~~~~~~~~--~~~-~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRWFELP--IER-PPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHcc--ccc-ccCchHHHHHHHHHhCCCC
Confidence 885433222 123 7899999999999999974
No 68
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.62 E-value=5.1e-15 Score=99.35 Aligned_cols=114 Identities=21% Similarity=0.248 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccC----CCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCc
Q 027956 86 GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF----GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFF 161 (216)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~ 161 (216)
|.++.+++++++|+.+..+.+.+.+..........+.- +....+...+.....+.+.++.||++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 56888999999999999998888765433222111100 00123444556677899999999999999999999999
Q ss_pred chhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcch
Q 027956 162 SLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRP 202 (216)
Q Consensus 162 t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 202 (216)
|+||+++++.+.+...... .. ..+|+|.+|++++.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP--LL-EKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc--cc-ccCchHHHHHHHHhcCC
Confidence 9999999988877754332 23 78999999999999986
No 69
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.62 E-value=2.7e-15 Score=101.28 Aligned_cols=115 Identities=27% Similarity=0.386 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhh
Q 027956 92 RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPF 171 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~ 171 (216)
++++++|+.+....+.+.+...+.... . ....++...+....++...++.+|+.|++++|++|+++|+||+++++.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~ 77 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLL-G---IAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGA 77 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHc-C---ccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHH
Confidence 678999999999999987765544322 1 123445567778888999999999999999999999999999999998
Q ss_pred hhhhcCCCCc-ccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 172 THYLVGPMGR-QHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 172 l~~~~~~~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
+.+....... ... ..+|++.+|++++.++|++++++.+.
T Consensus 78 ~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~~ 117 (123)
T cd03181 78 LLLGFTYVFDKEWR-AKYPNVTRWFNTVVNQPIFKAVFGEV 117 (123)
T ss_pred HHHHHHHHcCHHHH-HhChHHHHHHHHHHcCHHHHHHcCCC
Confidence 8876432211 122 57999999999999999999998773
No 70
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.61 E-value=4.2e-15 Score=100.08 Aligned_cols=115 Identities=15% Similarity=0.112 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc--CCCeecCCCcchhhhc
Q 027956 90 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLS 167 (216)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~--~~~fl~G~~~t~aD~~ 167 (216)
.+++++++|+.++++.+.+.+........... .+. ..+...+.....+.+.++.+|++|+ +++|++|+++|+||++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEE-LGL-DEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADIC 79 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHH
Confidence 46899999999999888876433333222111 010 1223334455678999999999998 4579999999999999
Q ss_pred chhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHh
Q 027956 168 HIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 209 (216)
Q Consensus 168 l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 209 (216)
+++.+.+..... +....+|+|++|++++.++|++++++.
T Consensus 80 ~~~~~~~~~~~~---~~~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 80 LVPQVYNARRFG---VDLSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHhC---CCcccCcHHHHHHHHHHhChhHHHhCc
Confidence 999887665332 212679999999999999999999864
No 71
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.60 E-value=5.3e-15 Score=89.55 Aligned_cols=70 Identities=46% Similarity=0.729 Sum_probs=62.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||+++.||+ ++++++|+++|++|+.+.++...+. ..++.+.+|.+++|+|+++|.++.||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999 9999999999999999999865432 2258889999999999999999999999999984
No 72
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1e-14 Score=106.65 Aligned_cols=194 Identities=21% Similarity=0.309 Sum_probs=138.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCc--eeEEEccCC---CCCCCChh------------------hhhhCC----CCCCC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIE--FETVPVDLI---KGEQRSPE------------------YLKLQP----FGELP 54 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~--~~~~~v~~~---~~~~~~~~------------------~~~~~p----~~~~P 54 (216)
+.||..-.||+ .|..++=++||+. ..+..+.+. +|....++ |..-.| .-+||
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVP 131 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVP 131 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEE
Confidence 68999999999 9999999999984 122222211 11111111 111122 34589
Q ss_pred eeEeCC---EEeehhHHHHHHHHHhhcc---cCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCC
Q 027956 55 VIQDGD---FILYESRAIMRYYAEKYRS---QGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVD 128 (216)
Q Consensus 55 ~l~~~~---~~l~es~~I~~yL~~~~~~---~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (216)
||.|.. -+-.||..|++-+...+.. ....++|.. .+.+++.|.+++...+..-+... +-...
T Consensus 132 VLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~----------GFA~t 199 (324)
T COG0435 132 VLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKA----------GFATT 199 (324)
T ss_pred EEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeee----------cccch
Confidence 999753 4568999999998876632 244577765 68899999999887776644322 22344
Q ss_pred HHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCc------ccccCCChhHHHHHHHHhcch
Q 027956 129 EKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR------QHMIRDRKHVSAWWDDISNRP 202 (216)
Q Consensus 129 ~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~------~~~~~~~p~l~~~~~~~~~~p 202 (216)
+++-++....+-..|+.||..|+++.|++|+++|-||+-|++.|.++..+-.. .-. ..||+|..|++.+.+.|
T Consensus 200 q~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI-~dypnL~~yLr~LYq~p 278 (324)
T COG0435 200 QEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRI-RDYPNLWGYLRDLYQLP 278 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchh-hcCchHHHHHHHHhcCc
Confidence 56666777888999999999999999999999999999999999877544321 112 45999999999999999
Q ss_pred hHHHHHh
Q 027956 203 SWKKVLE 209 (216)
Q Consensus 203 ~~~~~~~ 209 (216)
.|.+++.
T Consensus 279 g~~~T~d 285 (324)
T COG0435 279 GFAETVD 285 (324)
T ss_pred ccccccc
Confidence 9988763
No 73
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.59 E-value=8.8e-15 Score=98.05 Aligned_cols=109 Identities=25% Similarity=0.393 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++|+.+..+.+.+.+...+....... . ...+.....+.+.++.||++|++++|++|+++|+||+++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~ 74 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG---A----EPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVA 74 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC---C----CCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHH
Confidence 5788999999998888877765554433211 1 22345567889999999999998899999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
.+.++..... +....+|+|++|+++|.++|++++..
T Consensus 75 ~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 75 TVSTLEALLP--LDLSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHHHhcC--CChhhCchHHHHHHHHHcccchHHHH
Confidence 9988764121 21257999999999999999999865
No 74
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.59 E-value=1.3e-14 Score=97.65 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++.++.+.+.... +..++. . +..+...+.....+.+.+..||++|++++|++|+++|+||+++++
T Consensus 2 e~~~id~~~~~~~d~~~~-~~~~~~----~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~ 71 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMG-LARICY----S-----PDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYE 71 (121)
T ss_pred chHHHHHHHHHHHHHHHH-HHHhhc----C-----cchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHH
Confidence 467788888766654322 222211 1 122445566778899999999999998899999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
.+.++..... ... ..||+|.+|++|+.++|++++++++.
T Consensus 72 ~~~~~~~~~~-~~~-~~~P~l~~~~~rv~~~p~vk~~~~~~ 110 (121)
T cd03209 72 ALDQHRIFEP-DCL-DAFPNLKDFLERFEALPKISAYMKSD 110 (121)
T ss_pred HHHHHHHhCc-ccc-ccChHHHHHHHHHHHCHHHHHHHhcc
Confidence 9888764322 223 67999999999999999999999885
No 75
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.55 E-value=1.8e-14 Score=92.59 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=74.7
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHh
Q 027956 70 MRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEER 149 (216)
Q Consensus 70 ~~yL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 149 (216)
+|||++..| ++|.++.+.+++++|++.....+.. .....+.+.++.+|++
T Consensus 1 ~r~~~~~~~-----~~~~~~~~~~~vd~~~d~~~~~l~~-------------------------~~~~~~~~~l~~le~~ 50 (96)
T cd03200 1 ARFLYRLLG-----PAPNAPNAATNIDSWVDTAIFQLAE-------------------------GSSKEKAAVLRALNSA 50 (96)
T ss_pred CchHHHHhc-----ccCCCchHHHHHHHHHHHHHHHHhc-------------------------CCHHHHHHHHHHHHHH
Confidence 478888843 8899999999999999976533320 1234556788899999
Q ss_pred ccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhc
Q 027956 150 LSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 150 l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (216)
|++++|++|+++|+|||++++.+.+. .. .. ..+|+|.+|++|+.+
T Consensus 51 L~~~~fl~Gd~~tiADi~l~~~l~~~---~~--~~-~~~p~l~~w~~r~~~ 95 (96)
T cd03200 51 LGRSPWLVGSEFTVADIVSWCALLQT---GL--AS-AAPANVQRWLKSCEN 95 (96)
T ss_pred HcCCCccCCCCCCHHHHHHHHHHHHc---cc--cc-ccChHHHHHHHHHHh
Confidence 99999999999999999999887653 11 12 579999999999975
No 76
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.55 E-value=2.4e-14 Score=87.22 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=57.1
Q ss_pred eEEeCCC-------CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPA-------YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~-------~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
++||.++ .||+ ++++++|+++|++|+.+.++.. .++|.+++|+|+++|..+.||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence 4677777 8999 9999999999999999998753 16899999999999999999999999998
Q ss_pred Hh
Q 027956 75 EK 76 (216)
Q Consensus 75 ~~ 76 (216)
++
T Consensus 71 ~~ 72 (72)
T cd03054 71 KK 72 (72)
T ss_pred hC
Confidence 74
No 77
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.55 E-value=2.6e-14 Score=98.03 Aligned_cols=112 Identities=22% Similarity=0.284 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc--CCCeecCCCcchhhhcc
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLSH 168 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~--~~~fl~G~~~t~aD~~l 168 (216)
+.+++|+.++.+.+.+..... +.+ ..+ ....+...+.....+.+.++.||++|+ +++|++|+++|+||+++
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l 75 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILM-LPF---LPP---EEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHL 75 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hcc---CCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHH
Confidence 567888888877654433221 111 010 111112233445567899999999998 67899999999999999
Q ss_pred hhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 169 IPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 169 ~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
++.+.++..... ... ..||+|++|++++.++|++++++++-
T Consensus 76 ~~~l~~~~~~~~-~~l-~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 76 LEAILMVEELDP-SLL-SDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHHhch-hhh-ccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 999988754322 223 78999999999999999999999874
No 78
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.53 E-value=2.2e-14 Score=96.94 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC--CCeecCCCcchhhhcc
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSH 168 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~fl~G~~~t~aD~~l 168 (216)
++++.+.|+++++..+.+....+. . ++..+...+.+...++.+|+.|++ ++|++|+++|+||+++
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~ 68 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLG----------A---PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMI 68 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHh----------c---cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHh
Confidence 478899999998755444332221 1 223345667888899999999985 7999999999999999
Q ss_pred hhhhhhhcCCCCc---ccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 169 IPFTHYLVGPMGR---QHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 169 ~~~l~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
++.+.++...... ....+.+|+|++|++++.++|++++++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~ 113 (124)
T cd03184 69 WPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTD 113 (124)
T ss_pred hHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCC
Confidence 9998776533211 12227799999999999999999998865
No 79
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.52 E-value=1.3e-13 Score=93.33 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC---CCeecCCCcchhhhc
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK---SKYLAGDFFSLADLS 167 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~---~~fl~G~~~t~aD~~ 167 (216)
+.+++++.++.+.+.... +...+. . ..+...+.....+...+..||++|++ ++|++|+++|+||++
T Consensus 3 e~~~vd~~~~~~~d~~~~-~~~~~~----~------~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~ 71 (126)
T cd03210 3 EAALIDMVNDGVEDLRLK-YVRMIY----Q------NYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYN 71 (126)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhc----C------cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHH
Confidence 567788877766543322 222211 1 11333455667788999999999974 589999999999999
Q ss_pred chhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhhc
Q 027956 168 HIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELC 211 (216)
Q Consensus 168 l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 211 (216)
+++.+.++..... ... ..+|+|.+|++++.++|++++++++.
T Consensus 72 l~~~~~~~~~~~~-~~~-~~~P~l~~~~~rv~~~p~v~~~~~~~ 113 (126)
T cd03210 72 LFDLLDIHLVLAP-GCL-DAFPLLKAFVERLSARPKLKAYLESD 113 (126)
T ss_pred HHHHHHHHHHhCh-Hhh-hcChHHHHHHHHHHhCcHHHHHHhCc
Confidence 9999887754322 233 78999999999999999999999874
No 80
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.51 E-value=3.8e-14 Score=92.61 Aligned_cols=100 Identities=21% Similarity=0.299 Sum_probs=76.4
Q ss_pred HHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhc
Q 027956 97 QWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLV 176 (216)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~ 176 (216)
+|+.+....+.+.+...+. +. .+...+.....+...++.+|++|++++|++|+++|+||+++++.+.+..
T Consensus 3 ~w~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~ 72 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAM-----GI-----EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGL 72 (103)
T ss_pred eeeeeccccccHHHHHHHc-----CC-----CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHH
Confidence 4556666666665543321 10 1223455567799999999999998999999999999999999998876
Q ss_pred CCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 177 GPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 177 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
... .. +.+|+|++|++++.++|+++++.++
T Consensus 73 ~~~---~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 73 QFG---LL-PERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred HcC---CC-CCChHHHHHHHHHHcCHHHHHHhcc
Confidence 532 23 6799999999999999999998864
No 81
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=8.4e-14 Score=101.03 Aligned_cols=194 Identities=19% Similarity=0.219 Sum_probs=132.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCc----eeEEEc-cCCCCCCCCh--------------------------hhhhhCC-
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIE----FETVPV-DLIKGEQRSP--------------------------EYLKLQP- 49 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~----~~~~~v-~~~~~~~~~~--------------------------~~~~~~p- 49 (216)
+.||..-.||| .|+.+++++||+. +..+-- +-..|....+ -|..-.|
T Consensus 38 yhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p~ 117 (319)
T KOG2903|consen 38 YHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASPN 117 (319)
T ss_pred EEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCCC
Confidence 57999999999 9999999999984 322211 1111111111 0011122
Q ss_pred ---CCCCCeeEeC---CEEeehhHHHHHHHHHhhcc-------cCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHH
Q 027956 50 ---FGELPVIQDG---DFILYESRAIMRYYAEKYRS-------QGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQ 116 (216)
Q Consensus 50 ---~~~~P~l~~~---~~~l~es~~I~~yL~~~~~~-------~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (216)
.-+||||-|- ..+-.||..|++.+...+.. ..-.|+|.+ .++++++|.+|+.+.+...+..+
T Consensus 118 Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~--- 192 (319)
T KOG2903|consen 118 YTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKC--- 192 (319)
T ss_pred CCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeee---
Confidence 3459999974 46678999999999833321 122355544 78899999999888776644333
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCC--eecCCCcchhhhcchhhhhhhcCCCC------cccccCCC
Q 027956 117 LLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK--YLAGDFFSLADLSHIPFTHYLVGPMG------RQHMIRDR 188 (216)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~--fl~G~~~t~aD~~l~~~l~~~~~~~~------~~~~~~~~ 188 (216)
+-...++.-+.....+-+.|+.+|++|+++. |++|+++|.||+-|++.+-++..+-. ......+|
T Consensus 193 -------GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Y 265 (319)
T KOG2903|consen 193 -------GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEY 265 (319)
T ss_pred -------ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccC
Confidence 2223344445566778888999999999876 99999999999999998877654432 11222689
Q ss_pred hhHHHHHHHHhc-chhHHHHH
Q 027956 189 KHVSAWWDDISN-RPSWKKVL 208 (216)
Q Consensus 189 p~l~~~~~~~~~-~p~~~~~~ 208 (216)
|+|..|..++.. .|++..+.
T Consensus 266 p~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 266 PNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred cHHHHHHHHHHhhccchhhcc
Confidence 999999999987 88887665
No 82
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.50 E-value=8e-14 Score=94.09 Aligned_cols=83 Identities=19% Similarity=0.239 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHhhHHHHHHhccC----------------CCeecCCCcchhhhcchhhhhhhcCCC----CcccccC
Q 027956 127 VDEKLVKESDEKLGKTLDVYEERLSK----------------SKYLAGDFFSLADLSHIPFTHYLVGPM----GRQHMIR 186 (216)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~le~~l~~----------------~~fl~G~~~t~aD~~l~~~l~~~~~~~----~~~~~~~ 186 (216)
.+....+.....+...|..||.+|++ ++|++|+++|+|||++++.+.++..+. ....+ +
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~-~ 100 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIP-A 100 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcc-c
Confidence 34555667778899999999999986 679999999999999999988664221 11223 6
Q ss_pred CChhHHHHHHHHhcchhHHHHHhh
Q 027956 187 DRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 187 ~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
.+|+|++|++|+.+||+|++++..
T Consensus 101 ~~P~L~aw~~ri~aRPsfk~t~~~ 124 (134)
T cd03198 101 DLTGLWRYLKNAYQREEFTNTCPA 124 (134)
T ss_pred cCHHHHHHHHHHHCCHHHHHHcCC
Confidence 799999999999999999998743
No 83
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.48 E-value=2.4e-13 Score=91.28 Aligned_cols=104 Identities=17% Similarity=0.297 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc---CCCeecCCCcchh
Q 027956 88 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS---KSKYLAGDFFSLA 164 (216)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~---~~~fl~G~~~t~a 164 (216)
|+.+|+++++|+.+... +...+.. +.+.... ...+.+.++.||+.|+ +++|++| ++|+|
T Consensus 1 d~~~ra~~~~~~~~~~~-----~~~~~~~----~~~~~~~--------~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlA 62 (120)
T cd03203 1 DPAKREFADELLAYTDA-----FTKALYS----SLIKGDP--------SAEAAAALDYIENALSKFDDGPFFLG-QFSLV 62 (120)
T ss_pred CHHHHHHHHHHHHHHHH-----HHHHHHH----HHhcCCc--------hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHH
Confidence 46789999999998221 1111211 1111111 1234566777777776 4799999 99999
Q ss_pred hhcchhhhhhhcC----CCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 165 DLSHIPFTHYLVG----PMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 165 D~~l~~~l~~~~~----~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
|+++++.+.++.. ..+..+. +.+|+|.+|++++.++|+++++..+
T Consensus 63 Di~l~~~~~~~~~~~~~~~~~~~~-~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 63 DIAYVPFIERFQIFLSELFNYDIT-EGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc-ccCcHHHHHHHHHhcchHHHhHcCC
Confidence 9999999876532 1122233 6799999999999999999998753
No 84
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=2.7e-13 Score=90.13 Aligned_cols=112 Identities=20% Similarity=0.139 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhcc-CCCeecCCCcchhhhc
Q 027956 89 IEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS-KSKYLAGDFFSLADLS 167 (216)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~-~~~fl~G~~~t~aD~~ 167 (216)
+.+++++.+|+.++.+.+.+....... ...+.....+...+.....+.+.+..+|.+|+ +++|++| ++|+||++
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~ 75 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERST----EVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTD 75 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCc----cceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHH
Confidence 357899999999999998876211110 11011111113334556777888999999995 5589999 59999999
Q ss_pred chhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 168 HIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 168 l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
+++++.+....+. ... |++.+|++|+.+||+|++.++.
T Consensus 76 l~~~~~~~~~~g~---~l~--p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 76 LALMLNRLVLNGD---PVP--ERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHHHHHHHcCC---CCC--HHHHHHHHHHHCCHHHHHHHhc
Confidence 9999998876532 212 9999999999999999998864
No 85
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=1.5e-13 Score=89.31 Aligned_cols=99 Identities=21% Similarity=0.340 Sum_probs=72.6
Q ss_pred HHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhh
Q 027956 96 EQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 175 (216)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~ 175 (216)
++|+.+..+.+.+............. ....+.....+.+.++.+|+.|++++|++|+++|+||+++++.+.+.
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~ 74 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFGA-------PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALA 74 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhCC-------HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHH
Confidence 56888888887654433332222111 12345567889999999999999999999999999999999888664
Q ss_pred cCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 176 VGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 176 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
... ....+.+|+|++|++++.++|++
T Consensus 75 ~~~---~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 75 PEG---GVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred hcc---CCChhhCcHHHHHHHHHHhCcCC
Confidence 332 12226799999999999999974
No 86
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=8.9e-14 Score=91.15 Aligned_cols=104 Identities=25% Similarity=0.345 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchh
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 170 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~ 170 (216)
+++++++|+.+..+.+.+.+..+.......+ ....++...+....++.+.++.||+.|++++|++|+++|+||+++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLG--LGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeecc--CCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHH
Confidence 5789999999998888876654432222111 23455667778889999999999999998899999999999999999
Q ss_pred hhhhhcCCCCcccccCCChhHHHHHHHHh
Q 027956 171 FTHYLVGPMGRQHMIRDRKHVSAWWDDIS 199 (216)
Q Consensus 171 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~ 199 (216)
.+.++...... . ..+|+|.+|++++.
T Consensus 80 ~~~~~~~~~~~--~-~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVADEGGFD--L-ADYPAIRAWLARIE 105 (105)
T ss_pred HHHhccccCCC--h-HhCccHHHHHHhhC
Confidence 99887643322 2 67999999999873
No 87
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.46 E-value=1.2e-13 Score=88.93 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcch
Q 027956 129 EKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRP 202 (216)
Q Consensus 129 ~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 202 (216)
+...+.....+.+.++.+|+.|++++|++|+++|+||+++++.+.++........ .++||+|.+|++++.+||
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 4466677888999999999999999999999999999999999998877655433 278999999999999998
No 88
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.46 E-value=3.4e-12 Score=89.68 Aligned_cols=173 Identities=14% Similarity=0.188 Sum_probs=129.4
Q ss_pred HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhcccCCCCCC-CCHHHH
Q 027956 14 KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLG-KTIEER 92 (216)
Q Consensus 14 ~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~p-~~~~~~ 92 (216)
..|..+|+..++||+.+.-+- .+| ++|.|++|.|..|..+++|-.+|..+..++-- .+.. .+..++
T Consensus 38 LAVqtfLrMcnLPf~v~~~~N-------aef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~----~l~s~lsE~qk 104 (257)
T KOG3027|consen 38 LAVQTFLRMCNLPFNVRQRAN-------AEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV----TLTSWLSEDQK 104 (257)
T ss_pred HHHHHHHHHcCCCceeeecCC-------ccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhcc----chhhhhhhHHH
Confidence 889999999999999987642 233 48999999999999999999999999999841 2222 345578
Q ss_pred HHHHHHHHHHhcccchHHHHHHHH------HHhcccCC-------------------------CCCCHHHHHHHHHHHHh
Q 027956 93 GLVEQWLEVEAHNYNPAIYELTIQ------LLFSSKFG-------------------------RPVDEKLVKESDEKLGK 141 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~ 141 (216)
+.++..++++.+.+..+-..+.+. .......+ ...+....++..++...
T Consensus 105 admra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdk 184 (257)
T KOG3027|consen 105 ADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDK 184 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHH
Confidence 888888888777665443332221 11111111 11334556667788889
Q ss_pred hHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcc-----cccCCChhHHHHHHHHhc
Q 027956 142 TLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ-----HMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 142 ~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~-----~~~~~~p~l~~~~~~~~~ 200 (216)
+++.|...|+.++||.|++||-+|..+|+.+..+....... .. +.|++|-++++|+++
T Consensus 185 c~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~l-kkys~LlefcrrIeq 247 (257)
T KOG3027|consen 185 CCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANIL-KKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHH-HHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887665322 33 679999999999976
No 89
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.42 E-value=2.7e-13 Score=81.88 Aligned_cols=68 Identities=26% Similarity=0.408 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHH
Q 027956 130 KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 197 (216)
Q Consensus 130 ~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~ 197 (216)
+..+.....+.+.++.||++|++++|++|++||+||+++++.+.++..........+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 35567788999999999999999999999999999999999999998876433223789999999986
No 90
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.39 E-value=1.6e-12 Score=86.41 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=67.4
Q ss_pred HHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhc---cCCCeecCCCcchhhhcchhhh
Q 027956 96 EQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERL---SKSKYLAGDFFSLADLSHIPFT 172 (216)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l---~~~~fl~G~~~t~aD~~l~~~l 172 (216)
+.|..+..+.+...+..+.......+..+ ...+...+.....+.+.++.+|.++ ++++|++|+ +|+||+++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~ 81 (114)
T cd03194 4 RAWARSAAAEMHSGFAALRSECPMNLRAR-VPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVV 81 (114)
T ss_pred hHHHHHHHHHHHCcHHHHHHhCCCCcccC-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHH
Confidence 34444555566555555544332222111 1112222333444555555555554 567899999 999999999998
Q ss_pred hhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHh
Q 027956 173 HYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 209 (216)
Q Consensus 173 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 209 (216)
.+..... .. ..|+|++|++++.++|+++++++
T Consensus 82 ~~~~~~~---~~--~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 82 TRFRTYG---LP--LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHcC---CC--CCHHHHHHHHHHHCCHHHHHHHh
Confidence 8875432 22 23999999999999999999885
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.37 E-value=1.3e-12 Score=85.57 Aligned_cols=78 Identities=26% Similarity=0.298 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHhhHHHHHHhccCC----------CeecCCCcchhhhcchhhhhhhcCCCCccc--ccCCChhHHHH
Q 027956 127 VDEKLVKESDEKLGKTLDVYEERLSKS----------KYLAGDFFSLADLSHIPFTHYLVGPMGRQH--MIRDRKHVSAW 194 (216)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~le~~l~~~----------~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~--~~~~~p~l~~~ 194 (216)
.+....+.....+.+.+..+|++|+++ +|++|+++|+||+++++.+.++........ ....||+|.+|
T Consensus 22 ~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w 101 (111)
T cd03204 22 DNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAY 101 (111)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHH
Confidence 456666778899999999999999764 499999999999999999988765332211 12579999999
Q ss_pred HHHHhcchhH
Q 027956 195 WDDISNRPSW 204 (216)
Q Consensus 195 ~~~~~~~p~~ 204 (216)
++|+.+||+|
T Consensus 102 ~~rv~aRpsf 111 (111)
T cd03204 102 FERVLQRESF 111 (111)
T ss_pred HHHHHcCCCC
Confidence 9999999975
No 92
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.34 E-value=5.7e-12 Score=75.99 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=48.6
Q ss_pred CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 9 AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 9 ~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
+.+++ .+++++|++.|++|+.+.. .. .+ ..+|.|+||+|++||.+|+||.+|+.||.++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~--~~-----~~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCR--AN-----AE--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEec--CC-----cc--ccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 45667 9999999999999998843 21 11 1467899999999999999999999999863
No 93
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.32 E-value=1.6e-12 Score=87.23 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=61.5
Q ss_pred HHHHHHHHhhHHHHHHhccC-CCeecCCCcchhhhcchhhhhhhcCCCC----cccccCCChhHHHHHHHHhcchhHHHH
Q 027956 133 KESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADLSHIPFTHYLVGPMG----RQHMIRDRKHVSAWWDDISNRPSWKKV 207 (216)
Q Consensus 133 ~~~~~~~~~~l~~le~~l~~-~~fl~G~~~t~aD~~l~~~l~~~~~~~~----~~~~~~~~p~l~~~~~~~~~~p~~~~~ 207 (216)
+.....+.+.+..||++|++ ++|++|+++|+||+++++.+.++..... .... +.+|+|.+|++++.+||+|+++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~-~~~P~l~~w~~rl~~rps~~~t 107 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVP-ESLTSVKSYMKALFSRESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCc-ccchHHHHHHHHHHCCchhhhc
Confidence 33456788899999999984 7999999999999999997766643211 1122 6899999999999999999998
Q ss_pred Hhh
Q 027956 208 LEL 210 (216)
Q Consensus 208 ~~~ 210 (216)
+..
T Consensus 108 ~~~ 110 (121)
T cd03201 108 KAE 110 (121)
T ss_pred CCC
Confidence 753
No 94
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.30 E-value=4.5e-12 Score=82.14 Aligned_cols=67 Identities=27% Similarity=0.404 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhHHHHHHhccCCC--eecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhc
Q 027956 130 KLVKESDEKLGKTLDVYEERLSKSK--YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 130 ~~~~~~~~~~~~~l~~le~~l~~~~--fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (216)
...+.....+...+..++++|+++. |++|++||+||+++++.|..+... .+. +.+|+|.+|++||.+
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~---~~~-~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA---DFP-KDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC---HHT-TTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc---ccc-cccHHHHHHHHhhcC
Confidence 3455667889999999999999776 999999999999999999777643 223 689999999999974
No 95
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.30 E-value=9.2e-12 Score=83.99 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhc
Q 027956 132 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 132 ~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (216)
.+.....+...++.+|++|++++|+.|+++|+||+++++.+.++......... +.+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~-~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLL-EEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCccccc-ccCChHHHHHHHHhc
Confidence 34667788999999999999999999999999999999999888764333334 789999999999976
No 96
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.26 E-value=5.9e-12 Score=81.45 Aligned_cols=98 Identities=31% Similarity=0.454 Sum_probs=72.2
Q ss_pred HHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhh
Q 027956 96 EQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 175 (216)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~ 175 (216)
+.|+.+....+.+........... .....+...+...+.+.+.++.||+.|++++|++|+++|+||+++++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~ 77 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFV----GPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARL 77 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeecc----CCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHH
Confidence 456777777666655444322111 1123456667778889999999999999999999999999999999999988
Q ss_pred cCCCCcc-cccCCChhHHHHHHHH
Q 027956 176 VGPMGRQ-HMIRDRKHVSAWWDDI 198 (216)
Q Consensus 176 ~~~~~~~-~~~~~~p~l~~~~~~~ 198 (216)
....... .. +.+|+|.+|++++
T Consensus 78 ~~~~~~~~~~-~~~p~l~~~~~~~ 100 (100)
T cd00299 78 DLLGPLLGLL-DEYPRLAAWYDRL 100 (100)
T ss_pred HHhhhhhhhh-ccCccHHHHHHhC
Confidence 7654321 23 6799999999875
No 97
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.24 E-value=1.3e-11 Score=80.65 Aligned_cols=101 Identities=21% Similarity=0.211 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC--CCeecCCCcchhhhcc
Q 027956 91 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSH 168 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~fl~G~~~t~aD~~l 168 (216)
+++++++|++.+.+.... +...++. + .+....+.........+.+.++.||+.|++ ++|++|+++|+||+++
T Consensus 2 e~~~v~~~~~~~~d~~~~-~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l 75 (104)
T cd03192 2 EAARVDALVDTIADLRAE-FAKYFYE----K-DGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVV 75 (104)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhc----C-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHH
Confidence 467888888885543333 3333221 0 011123556667788899999999999987 8999999999999999
Q ss_pred hhhhhhhcCCCCcccccCCChhHHHHHHHH
Q 027956 169 IPFTHYLVGPMGRQHMIRDRKHVSAWWDDI 198 (216)
Q Consensus 169 ~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 198 (216)
++.+.++......... ..+|+|.+|++++
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~p~l~~~~~~~ 104 (104)
T cd03192 76 FDVLDYLLYLDPKLLL-KKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHhhCchhhH-HhChhHHHHHHhC
Confidence 9999888654332113 6799999999875
No 98
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.14 E-value=1.1e-10 Score=73.85 Aligned_cols=66 Identities=14% Similarity=0.146 Sum_probs=53.4
Q ss_pred HHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcc----cccCCChhHHHHHHHHh
Q 027956 134 ESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ----HMIRDRKHVSAWWDDIS 199 (216)
Q Consensus 134 ~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~~~~~~~ 199 (216)
....++.+.++.+|+.|++++|++|+++|+||+++++.+.++....... ...+.+|+|++|++|+.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 5567889999999999999999999999999999999988876431111 11257999999999974
No 99
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=1.9e-10 Score=74.33 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=67.7
Q ss_pred HHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhc
Q 027956 97 QWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLV 176 (216)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~ 176 (216)
+|+...++.+.+.+........ .+ .....+...+.....+.+.+..+|++|++++| +++|+||+++++.+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~ 76 (98)
T cd03205 3 RLEALADGILDAAVAIVYERRL-RP--EEKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLD 76 (98)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-Cc--HhhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHH
Confidence 4555555555555444332121 11 24456677888889999999999999998888 899999999999998886
Q ss_pred CCCCcccccCCChhHHHHHHHH
Q 027956 177 GPMGRQHMIRDRKHVSAWWDDI 198 (216)
Q Consensus 177 ~~~~~~~~~~~~p~l~~~~~~~ 198 (216)
.........+.+|+|.+|+++|
T Consensus 77 ~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 77 FRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHccCcchhhhChHHHHHHHhC
Confidence 4322111126799999999985
No 100
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.07 E-value=6.4e-10 Score=68.80 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=60.6
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
.++||+.++||+ .+++.+|+..|++|+.+.++-. ....++...++..++|++..||..+.++..|.+||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 489999999999 9999999999999999888543 223456667788999999999999999999999984
No 101
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=2.8e-08 Score=74.78 Aligned_cols=177 Identities=13% Similarity=0.121 Sum_probs=122.6
Q ss_pred Cch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC-CEEeehhHHHHHHHHHhhcccCCCCCCC-
Q 027956 11 ASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG-DFILYESRAIMRYYAEKYRSQGTELLGK- 87 (216)
Q Consensus 11 s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~-~~~l~es~~I~~yL~~~~~~~~~~l~p~- 87 (216)
++- ..+.+.+.+.+-|-+.+..... + ..|.|++|+|+.+ |..++.-.-|..+|....- +-.+.+.
T Consensus 17 d~~sL~~l~y~kl~~~~l~v~~ssN~-------~---~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~--ky~~d~dl 84 (313)
T KOG3028|consen 17 DPDSLAALIYLKLAGAPLKVVVSSNP-------W---RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTK--KYNLDADL 84 (313)
T ss_pred ChhHHHHHHHHHHhCCCceeEeecCC-------C---CCCCCCCCeEEecCCceeccHHHHHHHHHHhcc--cCCcCccH
Confidence 555 8889999999966666655322 1 1688999999965 5899999999999999521 1122222
Q ss_pred CHHHHHHHHHHHHHHhcccchHHHHHHHHH--Hh----cccCC--------------------------CCCCHHHHHHH
Q 027956 88 TIEERGLVEQWLEVEAHNYNPAIYELTIQL--LF----SSKFG--------------------------RPVDEKLVKES 135 (216)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~--------------------------~~~~~~~~~~~ 135 (216)
...+.+....|+.+..+.+.+++..-++.. .+ .+.+. ........++.
T Consensus 85 ~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i 164 (313)
T KOG3028|consen 85 SAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQI 164 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHH
Confidence 245677889999998888887765544321 00 00000 00112234455
Q ss_pred HHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcc-----cccCCChhHHHHHHHHhc
Q 027956 136 DEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ-----HMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 136 ~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~-----~~~~~~p~l~~~~~~~~~ 200 (216)
.....++++.|.+.|+.+.|++|+.||.-|+.+++.+..+....... .+ ..+++|.+|++++..
T Consensus 165 ~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l-~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 165 YKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHL-LAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHH-HhcchHHHHHHHHHH
Confidence 66778899999999999999999999999999999998854443221 22 348999999999875
No 102
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.04 E-value=2e-10 Score=77.53 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCC-----cccccCCChhHHHHHHHHh
Q 027956 131 LVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG-----RQHMIRDRKHVSAWWDDIS 199 (216)
Q Consensus 131 ~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~-----~~~~~~~~p~l~~~~~~~~ 199 (216)
..++....+.+.++.|+..|++++|++|++||.+|+++++.+..+..... .... +.||+|.+|++||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~-~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKV-KKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHH-HhCcHHHHHHHhcC
Confidence 44566778889999999999999999999999999999999888764311 1123 67999999999984
No 103
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.98 E-value=3.7e-09 Score=64.10 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=48.9
Q ss_pred CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 10 YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 10 ~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
.||+ .++.+.|+.+|++|+.+..... ..+|.|++|+|++++..+.+|..|++||.++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n~----------~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNNP----------WRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCCC----------CCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 5788 9999999999999988755311 2368999999999999999999999999875
No 104
>PRK10638 glutaredoxin 3; Provisional
Probab=98.96 E-value=4.1e-09 Score=65.81 Aligned_cols=73 Identities=21% Similarity=0.211 Sum_probs=61.4
Q ss_pred Ce-eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 1 MV-VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 1 M~-~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
|+ +++|+.+.||+ .+++.+|+.+|++|+.+.++... ...+++.+.++..++|+++.+|..|.+...+.++-.+
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~--~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDA--AKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCH--HHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 65 89999999999 99999999999999999886431 2346778889999999999999999888777765443
No 105
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.94 E-value=1.6e-09 Score=74.20 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCc-----ccccCCChhHHHHHHHHhc
Q 027956 130 KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR-----QHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 130 ~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~-----~~~~~~~p~l~~~~~~~~~ 200 (216)
...+...+...++++.|++.|++++|++|++||.+|+++++.+..+...... ... ..+|+|.+|++||.+
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~-~~~pnL~~~~~ri~~ 134 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHL-KQCPNLCRFCDRILS 134 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHH-HHCcHHHHHHHHHHH
Confidence 3456677788899999999999999999999999999999988777532221 123 679999999999975
No 106
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.86 E-value=1.8e-08 Score=61.10 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=59.2
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
+++||+.++||+ .+++-+|...|++|+.+.++... ....+.......++|++..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 478999999999 99999999999999999886432 22345556678899999999999999999999974
No 107
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.86 E-value=4.4e-08 Score=63.04 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccC-CCeecCCCcchhhh
Q 027956 88 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADL 166 (216)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~fl~G~~~t~aD~ 166 (216)
|..+|++.+++..+..+.|.+.-...--..+ |.........+.......+++...+..|+. ++||+|+ .|+||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vv----f~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVV----FRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHH----HS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhh----hcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHH
Confidence 4578999999999999988875544332222 222333445556667778888888888874 6899985 999999
Q ss_pred cchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHHhh
Q 027956 167 SHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 210 (216)
Q Consensus 167 ~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 210 (216)
.+++++.++...+ +.++ +++++|.++.-++|++++++.-
T Consensus 76 dlA~ml~Rl~~~g-d~vP----~~l~~Ya~~qwqrpsVQ~Wla~ 114 (117)
T PF14834_consen 76 DLALMLNRLVTYG-DPVP----ERLADYAERQWQRPSVQRWLAL 114 (117)
T ss_dssp HHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCC----HHHHHHHHHHHCCHHHHHHHHH
Confidence 9999999998754 2233 6999999999999999999863
No 108
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.83 E-value=4.2e-09 Score=71.95 Aligned_cols=64 Identities=17% Similarity=0.308 Sum_probs=47.3
Q ss_pred HHHHHhhHHHHHHhcc-CCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhc
Q 027956 136 DEKLGKTLDVYEERLS-KSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 200 (216)
Q Consensus 136 ~~~~~~~l~~le~~l~-~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (216)
++.+...++.+-+.++ +++|+.|++||+||+++++.+..+....... ....+|++.+|++||.+
T Consensus 81 r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~-Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFK-DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhcccc-chhhCcCHHHHHHHHHH
Confidence 3445555555545454 5689999999999999999998887653321 22679999999999976
No 109
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.79 E-value=2.9e-08 Score=61.50 Aligned_cols=61 Identities=25% Similarity=0.422 Sum_probs=48.6
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEee
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILY 64 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~ 64 (216)
|.++||+.++||+ .+++-+|..+||+|+.+.++-. ....+....++..++|+++.++..+.
T Consensus 1 ~~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~---~~~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 1 MRITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV---PEAAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred CEEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC---HHHHHHHHHcCCCCcCEEEECCEEEe
Confidence 6799999999999 9999999999999999988643 11122234468889999999886544
No 110
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.64 E-value=1.4e-07 Score=57.34 Aligned_cols=66 Identities=18% Similarity=0.219 Sum_probs=54.8
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIM 70 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~ 70 (216)
++||+.+.||+ .+++.+|+..|++|+.+.+... ....+++.+.++..++|++..||..|..-..+.
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~--~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIF--PERKAELEERTGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHH
Confidence 78999999999 9999999999999999988643 233567888899999999999998776654443
No 111
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=1.7e-07 Score=57.81 Aligned_cols=72 Identities=19% Similarity=0.142 Sum_probs=55.8
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhh-hhCCCCCCCeeEeCCEEeehhHHHHHHH
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYL-KLQPFGELPVIQDGDFILYESRAIMRYY 73 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~-~~~p~~~~P~l~~~~~~l~es~~I~~yL 73 (216)
|++++|..+.||| .++.-+|..+|++|+.+.++....+ ...++. ..++..++|+++.|+..+.....+.++.
T Consensus 1 ~~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~-~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 1 ANVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPE-EAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred CCEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHH-HHHHHHHHhCCCCCcCEEEECCEEEeCcccHHHHH
Confidence 5689999999999 9999999999999999999766431 223444 4558999999999997766544444443
No 112
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.56 E-value=3e-07 Score=55.32 Aligned_cols=69 Identities=19% Similarity=0.119 Sum_probs=57.7
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY 72 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~y 72 (216)
++++|+.++||+ ++++.+|..++++|+.+.+.... ...+++...++..++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~--~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDG--ELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCH--HHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 378999999999 99999999999999988775431 2345667788999999999999999998877653
No 113
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.56 E-value=3.4e-07 Score=55.45 Aligned_cols=69 Identities=29% Similarity=0.427 Sum_probs=53.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEe--ehhHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFIL--YESRAIMRYY 73 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l--~es~~I~~yL 73 (216)
++||+.++||+ .+++.+|...|++|..+.++.. ....+++.+.++...+|+++.+|..+ .++..|.++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~--~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKD--SAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCC--HHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 79999999999 9999999999999998877532 11234566778899999999988776 4445555443
No 114
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.52 E-value=3.1e-07 Score=55.49 Aligned_cols=62 Identities=32% Similarity=0.297 Sum_probs=51.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYES 66 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es 66 (216)
+++|+.++|++ .+++.+|.++|++|+.+.++.. ....+++.+.+|.+.+|+++++|..+.+.
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~--~~~~~~~~~~~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEVDVDED--PEALEELKKLNGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCC--HHHHHHHHHHcCCcccCEEEECCEEEecC
Confidence 68999999999 9999999999999999888643 12345677888999999999988766553
No 115
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.48 E-value=1.1e-06 Score=55.09 Aligned_cols=76 Identities=13% Similarity=0.109 Sum_probs=61.9
Q ss_pred CeeEEeCCCCCch-HHHHHHHHH-----cCCceeEEEccCCCCCCCChhhhhhCC--CCCCCeeEeCCEEeehhHHHHHH
Q 027956 1 MVVKVYGPAYASP-KRVILCLVE-----KEIEFETVPVDLIKGEQRSPEYLKLQP--FGELPVIQDGDFILYESRAIMRY 72 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p--~~~~P~l~~~~~~l~es~~I~~y 72 (216)
|.+++|+.++||+ .+++-+|+. .|++|+.+.++-.. ...+++..... ...+|.+..+|..+.+...|.++
T Consensus 1 m~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~--~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~ 78 (85)
T PRK11200 1 MFVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG--ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAY 78 (85)
T ss_pred CEEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh--HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHH
Confidence 7799999999999 999999999 89999999886431 11234444333 36899999999999999999999
Q ss_pred HHHhhc
Q 027956 73 YAEKYR 78 (216)
Q Consensus 73 L~~~~~ 78 (216)
+.++++
T Consensus 79 ~~~~~~ 84 (85)
T PRK11200 79 VKENLG 84 (85)
T ss_pred HHHhcc
Confidence 999874
No 116
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.42 E-value=1.3e-06 Score=53.24 Aligned_cols=69 Identities=19% Similarity=0.172 Sum_probs=54.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCC-CCCeeEeCCEEeehhHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFG-ELPVIQDGDFILYESRAIMRYY 73 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~-~~P~l~~~~~~l~es~~I~~yL 73 (216)
++||+.+.||+ .+++-+|+..|++|+.+.++.. ....+++....... .+|++..+|..+.+...+.++-
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~--~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGD--PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCC--HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 68999999999 9999999999999999988643 11223444444444 8999999999999888887764
No 117
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.31 E-value=2.4e-06 Score=52.65 Aligned_cols=71 Identities=21% Similarity=0.215 Sum_probs=57.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
+++|+.+.||+ .+++-+|+..|++|+.+.++... ...+++........+|++..+|..+.+...+.++..+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~--~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDP--ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCH--HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 58999999999 99999999999999999886431 1234555666788999999999988887777766544
No 118
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.31 E-value=1.9e-06 Score=52.15 Aligned_cols=56 Identities=29% Similarity=0.402 Sum_probs=43.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCE
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDF 61 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~ 61 (216)
++||+.+.||+ .+++-+|+..|++|+.+.++-. ....+.....+...+|+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~---~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQ---PEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCC---HHHHHHHHHcCCcccCEEEECCC
Confidence 58999999999 9999999999999999988643 11222333457778999998664
No 119
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.19 E-value=2.6e-06 Score=49.54 Aligned_cols=59 Identities=25% Similarity=0.229 Sum_probs=48.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEe
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFIL 63 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l 63 (216)
+++|+.++||+ .+++-+|+..|++|+.+.++... ...+++.......++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~--~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDE--EAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSH--HHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccch--hHHHHHHHHcCCCccCEEEECCEEC
Confidence 57999999999 99999999999999999997542 2244555566788999999988754
No 120
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.19 E-value=3e-06 Score=68.52 Aligned_cols=162 Identities=19% Similarity=0.231 Sum_probs=99.7
Q ss_pred CeeEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhccc
Q 027956 1 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQ 80 (216)
Q Consensus 1 M~~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~~~ 80 (216)
|+|+|-....+|......++...+++...... .+.++ ++...-++..+..+..+..|..+... .
T Consensus 1 ~~~~l~~n~~~ppia~~~~~~a~~~~~~~~~s-------~s~k~--------~~~~~~d~~~l~~a~~~~~~~~~~~~-~ 64 (712)
T KOG1147|consen 1 MGMKLSANLEAPPIAYIAALAASAVNVDGKSS-------FSEKL--------VDKQFLDGRKLNGATEPVVYSAALAK-A 64 (712)
T ss_pred CCceeecCCCCCchHHHHHHHhhcCCccCcch-------hhhhh--------hhhhccccccccCCccchhhhhhhcc-c
Confidence 67788877777774444555555544322111 01111 12222234555556666666554332 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHHHHHHhccCCCeecCCC
Q 027956 81 GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDF 160 (216)
Q Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~ 160 (216)
.+.+++.+ .++.+++.|+++.... ....+...+..+++.|.-..|++|.+
T Consensus 65 ~~~lf~~~-~d~~~vd~w~~~s~~~-----------------------------~~~~~s~~~~~ld~~l~~~t~lvg~s 114 (712)
T KOG1147|consen 65 DPKLFGNN-IDRSQVDHWVSFSSTF-----------------------------SFDEISSSLSELDKFLVLRTFLVGNS 114 (712)
T ss_pred CHhHcCCc-ccHHHHHHHHHHhhhc-----------------------------chHHHHHHHHHHHhhhhHHHHhhccc
Confidence 33467766 7899999999987651 12346677788888888889999999
Q ss_pred cchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHHHH
Q 027956 161 FSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 208 (216)
Q Consensus 161 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 208 (216)
+|.||+++|+.++.-......--....+-++.||++-....++...+.
T Consensus 115 ls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 115 LSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred hhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 999999999998864322211111145789999999555555544444
No 121
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.12 E-value=6.9e-06 Score=50.16 Aligned_cols=63 Identities=14% Similarity=0.240 Sum_probs=49.0
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhC-CCCCCCeeE-eCCEEeehhH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQ-PFGELPVIQ-DGDFILYESR 67 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~~P~l~-~~~~~l~es~ 67 (216)
++||+.++||+ ++++.+|...|++|+.+.++-. ......+..++ +...+|+++ ++|..+.++.
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~--~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEED--EGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCcCC--HhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 78999999999 9999999999999998776533 22234556676 889999997 4666666553
No 122
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.08 E-value=1.8e-05 Score=48.96 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=58.9
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCC-CCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGE-QRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
+++|+.++||+ .+++-+|...+++|+.+.++..... .....+.+.+....+|++..+|..+.++..|.++..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 68999999999 9999999999999999988765321 1112344666778999999999999999988887665
No 123
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.06 E-value=1.9e-05 Score=50.88 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=54.2
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCC-CCChhhhhhCCCCCCCeeEeCCEEeehhHHHHH
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGE-QRSPEYLKLQPFGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~ 71 (216)
++++|+.++||+ .+++-+|...|++|+.+.++..... .....+...+...++|.+..+|..|.+...+.+
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~ 80 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMA 80 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHH
Confidence 489999999999 9999999999999999999743210 011234455678899999999988877666555
No 124
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.04 E-value=3.2e-05 Score=48.48 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=57.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcC-----CceeEEEccCCCCCCCChhhhhhCCC--CCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKE-----IEFETVPVDLIKGEQRSPEYLKLQPF--GELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~g-----i~~~~~~v~~~~~~~~~~~~~~~~p~--~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
+++|+.++||+ .+++-+|...+ ++|+.+.++... ...+++...... ..+|++..+|..+.++..|.+++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~--~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEG--ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 58999999999 99999999984 568887775321 113345444433 689999999999999999999999
Q ss_pred Hhhc
Q 027956 75 EKYR 78 (216)
Q Consensus 75 ~~~~ 78 (216)
++++
T Consensus 80 ~~~~ 83 (86)
T TIGR02183 80 ENFD 83 (86)
T ss_pred hccc
Confidence 8764
No 125
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.94 E-value=6.6e-05 Score=45.15 Aligned_cols=54 Identities=31% Similarity=0.393 Sum_probs=46.2
Q ss_pred CCch-HHHHHHHHHcCCc---eeEEEccCCCCCCCChhhhhhCCCCCCCeeEe-CCEEeehhHHHHHHH
Q 027956 10 YASP-KRVILCLVEKEIE---FETVPVDLIKGEQRSPEYLKLQPFGELPVIQD-GDFILYESRAIMRYY 73 (216)
Q Consensus 10 ~s~~-~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~-~~~~l~es~~I~~yL 73 (216)
.++. .++.+.|+..+.+ |+.+...-. .++|.|++|+|.+ ++..+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n~----------~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNNP----------WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCCC----------CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 5677 9999999999999 887776422 1489999999999 899999999999998
No 126
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.91 E-value=3.2e-05 Score=52.08 Aligned_cols=68 Identities=24% Similarity=0.246 Sum_probs=51.1
Q ss_pred HHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 132 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 132 ~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
.+....++...|..||..+......-| ++|+.||.+|+.|+.+..+.+-.++ |++++|+++|.+...|
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~P----~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGIQWP----PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS-------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCCcCC----HHHHHHHHHHHHHcCC
Confidence 346678889999999999886555555 8999999999999999887765554 7999999999887655
No 127
>PHA03050 glutaredoxin; Provisional
Probab=97.87 E-value=7.2e-05 Score=48.91 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=54.1
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCC---ceeEEEccCCC-CCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEI---EFETVPVDLIK-GEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi---~~~~~~v~~~~-~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~ 71 (216)
+++|+.++||| .+++-+|...|+ +|+.+.++-.. +.....++.+.+...+||.+..+|..|-....+.+
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 78999999999 999999999999 78888887421 11113456677778899999999988877666555
No 128
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.67 E-value=0.00021 Score=44.27 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=56.2
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCc--eeEEEccCCCCC-CCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIE--FETVPVDLIKGE-QRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAE 75 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~--~~~~~v~~~~~~-~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~ 75 (216)
+++|+.++||+ .+++-+|...+++ |+.+.++..... .....+........+|.+..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 47899999999 9999999999999 888888754211 0011244556677899999999999998888776654
No 129
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.64 E-value=0.00034 Score=44.18 Aligned_cols=69 Identities=10% Similarity=0.099 Sum_probs=53.0
Q ss_pred eEEeCC-----CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHH
Q 027956 3 VKVYGP-----AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYY 73 (216)
Q Consensus 3 ~~Ly~~-----~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL 73 (216)
+.+|.. ++||+ .+++-+|...|++|+.+.+... .....++.+.+...++|.+..+|..|-+...+.+..
T Consensus 10 vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 10 VVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred EEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 567754 69999 9999999999999999988532 122334456677789999999998888877776643
No 130
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.57 E-value=0.00045 Score=44.29 Aligned_cols=68 Identities=15% Similarity=0.072 Sum_probs=50.9
Q ss_pred eEEeCC-----CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHH
Q 027956 3 VKVYGP-----AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY 72 (216)
Q Consensus 3 ~~Ly~~-----~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~y 72 (216)
+.+|.. +.||+ .+++-+|...|++|+.+.+.-. .....++...+...++|.+..+|..|-+...+.+.
T Consensus 14 Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~--~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l 87 (97)
T TIGR00365 14 VVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLED--PEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEM 87 (97)
T ss_pred EEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHH
Confidence 567754 89999 9999999999999998887422 12223444567778999999999887776665553
No 131
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.55 E-value=0.00015 Score=48.43 Aligned_cols=67 Identities=16% Similarity=0.125 Sum_probs=52.8
Q ss_pred HHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhH
Q 027956 133 KESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 204 (216)
Q Consensus 133 ~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 204 (216)
......+...|+.++..+..... ++.++|+.|+.+|+.|+.+..+.+-.++ |++..|+++|.+...|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vkgi~~P----~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVKGLVFP----PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhcCCCCC----HHHHHHHHHHHHHhCC
Confidence 35667888899999999854444 4568999999999999999877655444 7999999999876543
No 132
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.03 E-value=0.0032 Score=51.25 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=52.3
Q ss_pred Ce-eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhh-h--------hCCCCCCCeeEeCCEEeehhHHH
Q 027956 1 MV-VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYL-K--------LQPFGELPVIQDGDFILYESRAI 69 (216)
Q Consensus 1 M~-~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~-~--------~~p~~~~P~l~~~~~~l~es~~I 69 (216)
|. +++|+.++||+ .++.-+|...||+|+.+.|+-. ....++. . .....++|.+..||..|.+-..+
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~---~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDD---VKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCC---hhHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHH
Confidence 65 89999999999 9999999999999999998722 1112222 2 23567899999999888777666
Q ss_pred HH
Q 027956 70 MR 71 (216)
Q Consensus 70 ~~ 71 (216)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 55
No 133
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=96.99 E-value=0.0037 Score=43.19 Aligned_cols=67 Identities=18% Similarity=0.141 Sum_probs=51.5
Q ss_pred eEEeCCC------CCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCC----CCCCCeeEeCCEEeehhHHHHH
Q 027956 3 VKVYGPA------YASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQP----FGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 3 ~~Ly~~~------~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p----~~~~P~l~~~~~~l~es~~I~~ 71 (216)
++||..+ .+|+ .+++.+|+..+|+|+.+.|++.. ...+++.+... ...+|.+..+|..|-..-.+.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~--~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDS--GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 6789888 8999 99999999999999999887541 12334444433 3789999999988877666655
No 134
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.0027 Score=42.08 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=31.0
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
|++++|+.|.|.. ++++-.|+..||+|+.+.+.
T Consensus 1 ~~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 1 MMITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred CeEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 7899999999999 99999999999999998774
No 135
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.44 E-value=0.025 Score=36.55 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=55.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCC-ChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQR-SPEYLKLQPFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~-~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
+.+|+-.+||+ .+++-+|...|+++..+.+|-...... ...+.++....++|.+..+|.-|-....+.++-.
T Consensus 16 VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 16 VVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred EEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 67889999999 999999999999999999986632111 1122345666799999999988887777776543
No 136
>PRK10824 glutaredoxin-4; Provisional
Probab=96.41 E-value=0.017 Score=38.08 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=51.1
Q ss_pred eEEeCC-----CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHH
Q 027956 3 VKVYGP-----AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY 72 (216)
Q Consensus 3 ~~Ly~~-----~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~y 72 (216)
+.+|.. |.||| .++.-+|...|++|..+.++-. ..-...+...+...++|-+..+|..|-+.-.+...
T Consensus 17 Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 17 ILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred EEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 456654 59999 9999999999999999877532 11234455667788999999999888776655553
No 137
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.37 E-value=0.0057 Score=41.50 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=29.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|++ .+++-+|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 89999999999 99999999999999999884
No 138
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.37 E-value=0.029 Score=32.89 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=39.8
Q ss_pred eEEeCCCCCch-HHHHHHHHHc-----CCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEee
Q 027956 3 VKVYGPAYASP-KRVILCLVEK-----EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILY 64 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~ 64 (216)
+++|+.++||+ .+++-+|+.. ++++..+.++- .++.........+|.+..+|..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~~------~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAAE------FPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEccc------CHhHHHHcCCcccCEEEECCEEEE
Confidence 68999999999 9998888765 56666665532 244444445567999998886554
No 139
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.32 E-value=0.0069 Score=40.10 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=29.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|+. ++++-.|+..|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 89999999999 99999999999999999884
No 140
>PRK10026 arsenate reductase; Provisional
Probab=96.18 E-value=0.0081 Score=41.12 Aligned_cols=33 Identities=9% Similarity=0.130 Sum_probs=30.7
Q ss_pred Ce-eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 1 MV-VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 1 M~-~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
|+ +++|+.+.|.. ++++-.|+..|++|+.+.+-
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 65 99999999999 99999999999999999874
No 141
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.01 E-value=0.0092 Score=39.22 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=29.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDL 34 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~ 34 (216)
++||+.+.|++ .+++-+|+..|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 58999999999 999999999999999998853
No 142
>PTZ00062 glutaredoxin; Provisional
Probab=96.00 E-value=0.032 Score=40.81 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=49.9
Q ss_pred eEEeCC-----CCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHH
Q 027956 3 VKVYGP-----AYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 3 ~~Ly~~-----~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~ 71 (216)
+.||.. |.||+ .++.-+|...|++|....+.-. +.....+...+...++|.+..+|..|-+...+.+
T Consensus 115 Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d--~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 115 ILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFED--PDLREELKVYSNWPTYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHH
Confidence 456644 68999 9999999999999998877532 2223445566777899999999988766655554
No 143
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.98 E-value=0.013 Score=39.81 Aligned_cols=31 Identities=13% Similarity=0.319 Sum_probs=29.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|+. ++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 89999999999 99999999999999999885
No 144
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=95.93 E-value=0.011 Score=38.38 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=29.2
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|++ ++++-.|+.+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 58999999999 99999999999999999885
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.80 E-value=0.017 Score=39.16 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=29.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|+. ++++-.|+..|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 89999999999 99999999999999999885
No 146
>PRK10853 putative reductase; Provisional
Probab=95.69 E-value=0.02 Score=38.09 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=29.5
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
|+++|+.+.|.. ++++-.|+..|++|+.+.+-
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 289999999999 99999999999999998774
No 147
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.34 E-value=0.027 Score=37.11 Aligned_cols=31 Identities=16% Similarity=0.041 Sum_probs=29.2
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
++||+.+.|.. ++++-.|+..|++|+.+.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 68999999999 99999999999999999874
No 148
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.28 E-value=0.029 Score=36.44 Aligned_cols=31 Identities=13% Similarity=0.242 Sum_probs=29.1
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|+. ++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999 99999999999999999884
No 149
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.23 E-value=0.03 Score=37.18 Aligned_cols=31 Identities=26% Similarity=0.493 Sum_probs=28.9
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|++ ++++-+|+..|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999 99999999999999998874
No 150
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.18 E-value=0.12 Score=32.64 Aligned_cols=67 Identities=25% Similarity=0.281 Sum_probs=46.5
Q ss_pred eEEeCCCCCch-------HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCC----CCCCCeeEeCCEEeehhHHHHH
Q 027956 3 VKVYGPAYASP-------KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQP----FGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 3 ~~Ly~~~~s~~-------~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p----~~~~P~l~~~~~~l~es~~I~~ 71 (216)
+++|....+.. ++++.+|.-+||+|+.+.|+... ....++.+..+ ...+|-+..++..+-+.-.+.+
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~--~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNE--ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCH--HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 57787666553 45678999999999999997642 22344444433 4789999988887766644443
No 151
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=95.03 E-value=0.041 Score=37.01 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=29.7
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++||+.+.|.. ++++-.|+..|++|+.+.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 479999999999 99999999999999999874
No 152
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=94.40 E-value=0.11 Score=33.35 Aligned_cols=63 Identities=29% Similarity=0.313 Sum_probs=36.4
Q ss_pred CeeEEeCCCCCc------h-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhC---------CCCCCCeeEeCCEEee
Q 027956 1 MVVKVYGPAYAS------P-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQ---------PFGELPVIQDGDFILY 64 (216)
Q Consensus 1 M~~~Ly~~~~s~------~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~---------p~~~~P~l~~~~~~l~ 64 (216)
|++++|....+. . +++..+|+.++|+|+.+.|... +......++.. +....|-+..++..+-
T Consensus 1 m~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~--e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~G 78 (99)
T PF04908_consen 1 MVIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMD--EEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCG 78 (99)
T ss_dssp -SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT---HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEE
T ss_pred CEEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCC--HHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEe
Confidence 889999877665 3 6788999999999999988653 22233444333 2233467777776544
Q ss_pred h
Q 027956 65 E 65 (216)
Q Consensus 65 e 65 (216)
+
T Consensus 79 d 79 (99)
T PF04908_consen 79 D 79 (99)
T ss_dssp E
T ss_pred e
Confidence 3
No 153
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=94.40 E-value=0.51 Score=28.51 Aligned_cols=56 Identities=16% Similarity=0.106 Sum_probs=40.0
Q ss_pred CeeEEeCCCCCch-HHH----HHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEee
Q 027956 1 MVVKVYGPAYASP-KRV----ILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILY 64 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v----~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~ 64 (216)
|.+.+|. ++||. ..+ .-++++.|.+++.+.++- .++. ...-...+|++..+|..+.
T Consensus 1 m~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~a-~~~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 1 MKIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNEI-LEAGVTATPGVAVDGELVI 61 (76)
T ss_pred CEEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHHH-HHcCCCcCCEEEECCEEEE
Confidence 6688887 99998 777 667888888888888861 1222 2234567999998876553
No 154
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=93.95 E-value=0.19 Score=29.99 Aligned_cols=64 Identities=13% Similarity=0.308 Sum_probs=45.6
Q ss_pred Ce-eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCC--------CCCChhhhhh--CCCCCCCeeEe-CCEEee
Q 027956 1 MV-VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKG--------EQRSPEYLKL--QPFGELPVIQD-GDFILY 64 (216)
Q Consensus 1 M~-~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~--------~~~~~~~~~~--~p~~~~P~l~~-~~~~l~ 64 (216)
|+ .+||+...||- ....--|+-.+++|+.+.|.-.-. .+..++|... |.+--+|+|.. +|.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 55 69999999999 989999999999999998862211 1335666543 44556899985 444443
No 155
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=93.82 E-value=0.095 Score=34.46 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=28.6
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|.. ++++-.|+..|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999 99999999999999998763
No 156
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=93.62 E-value=0.11 Score=34.32 Aligned_cols=31 Identities=29% Similarity=0.304 Sum_probs=28.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+++|+.+.|.. ++++-.|+..|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999 99999999999999998774
No 157
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=93.31 E-value=0.3 Score=31.74 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=44.6
Q ss_pred eCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhh-C-CCCCCCeeEeC-C-------------EEeehhHH
Q 027956 6 YGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKL-Q-PFGELPVIQDG-D-------------FILYESRA 68 (216)
Q Consensus 6 y~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~-~-p~~~~P~l~~~-~-------------~~l~es~~ 68 (216)
|+++.|.. +.+....-...-..+.+.|++. ....+.... . .+..+|+|+-+ + .-|.++..
T Consensus 22 f~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~---RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~ 98 (112)
T PF11287_consen 22 FYCPHCAAIEGLLASFPDLRERLDVRRVDFP---RPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRR 98 (112)
T ss_pred EECCchHHHHhHHhhChhhhhcccEEEeCCC---CchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHH
Confidence 34455555 5555544444555666777765 234455433 2 24669999943 2 24999999
Q ss_pred HHHHHHHhhc
Q 027956 69 IMRYYAEKYR 78 (216)
Q Consensus 69 I~~yL~~~~~ 78 (216)
|++||.+.||
T Consensus 99 I~~~La~r~g 108 (112)
T PF11287_consen 99 ILRYLAERHG 108 (112)
T ss_pred HHHHHHHHcC
Confidence 9999999997
No 158
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=93.26 E-value=0.48 Score=29.03 Aligned_cols=54 Identities=20% Similarity=0.242 Sum_probs=38.0
Q ss_pred eeEEeCCCCCch-HHHHHHHHHcC--CceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCC
Q 027956 2 VVKVYGPAYASP-KRVILCLVEKE--IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGD 60 (216)
Q Consensus 2 ~~~Ly~~~~s~~-~~v~~~L~~~g--i~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~ 60 (216)
+++||+-++|+. ..+.-+|+... .+++...+|..+ .+++...-- ..+|||..++
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~----d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDE----DPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTT----THHHHHHSC-TSTSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCC----CHHHHHHhc-CCCCEEEEcC
Confidence 378999999999 99999998643 456666666652 355544433 4799999877
No 159
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=90.95 E-value=0.44 Score=33.80 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=33.4
Q ss_pred HHHhhHHHHHHhccCC---CeecCCC-cchhhhcchhhhhhhc
Q 027956 138 KLGKTLDVYEERLSKS---KYLAGDF-FSLADLSHIPFTHYLV 176 (216)
Q Consensus 138 ~~~~~l~~le~~l~~~---~fl~G~~-~t~aD~~l~~~l~~~~ 176 (216)
.-.+++..|++.|++. +|++|+. +|-.||.+++.|.-+.
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 3467899999999988 9999977 9999999999888664
No 160
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=90.29 E-value=2.3 Score=26.57 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=37.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHc-----CCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEee
Q 027956 3 VKVYGPAYASP-KRVILCLVEK-----EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILY 64 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~ 64 (216)
+.+|..++|++ ..+.-++... ++.+..+.++- .++......-..+|.++.||..+.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~------~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGAL------FQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhHh------CHHHHHHcCCccCCEEEECCEEEE
Confidence 67888899998 7766665554 45666665532 344555555667999998776544
No 161
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=89.10 E-value=1.8 Score=27.59 Aligned_cols=63 Identities=8% Similarity=-0.001 Sum_probs=44.4
Q ss_pred CCCCCch-HHHHHHHHHcC-CceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHH
Q 027956 7 GPAYASP-KRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMR 71 (216)
Q Consensus 7 ~~~~s~~-~~v~~~L~~~g-i~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~ 71 (216)
..|.|+| .++--+|...| ++|..+.|--. +.-++.....+...+.|-|-.+|.-|-.|--|.+
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d--~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~E 90 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGVVDFAYVDVLQD--PEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVRE 90 (105)
T ss_pred CCCCCCccHHHHHHHHHcCCcceeEEeeccC--HHHHhccHhhcCCCCCceeeECCEEeccHHHHHH
Confidence 4678999 99999999999 67777766321 2223344455777899999999887777544433
No 162
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=88.74 E-value=3.6 Score=24.69 Aligned_cols=57 Identities=16% Similarity=0.182 Sum_probs=35.4
Q ss_pred CeeEEeCCCCCch-HHHHH----HHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeeh
Q 027956 1 MVVKVYGPAYASP-KRVIL----CLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYE 65 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~----~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~e 65 (216)
|.++++ .++|++ ..+.- ++...|+.++.+.+ . ..++. ....-..+|.++.||...+.
T Consensus 1 m~I~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~--~----~~~~~-~~ygv~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 1 MKIKVF-SPGCPYCPELVQLLKEAAEELGIEVEIIDI--E----DFEEI-EKYGVMSVPALVINGKVVFV 62 (76)
T ss_dssp EEEEEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEEET--T----THHHH-HHTT-SSSSEEEETTEEEEE
T ss_pred CEEEEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEEEc--c----CHHHH-HHcCCCCCCEEEECCEEEEE
Confidence 556774 566887 65444 55566777766654 1 12343 55566789999998876544
No 163
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=87.93 E-value=4.1 Score=24.46 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=36.5
Q ss_pred eEEeCCCCCch-HHHHHHHHH----cCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCE
Q 027956 3 VKVYGPAYASP-KRVILCLVE----KEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDF 61 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~ 61 (216)
+++|+.++|++ ..+.-.|+. .+..+....|+..+ .++.........+|++..+|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVME----NPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCcc----CHHHHHHcCCccCCEEEECCE
Confidence 68999999999 877777653 34445555666542 234444445567999998764
No 164
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=87.38 E-value=1.8 Score=23.76 Aligned_cols=53 Identities=21% Similarity=0.253 Sum_probs=34.7
Q ss_pred eEEeCCCCCch-HHHHHHHH-----HcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEe
Q 027956 3 VKVYGPAYASP-KRVILCLV-----EKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD 58 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~ 58 (216)
+.+|+...|+. .+.+..+. ..++.+..+.++... .........+...+|.++.
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~~~~ 59 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDP---ALEKELKRYGVGGVPTLVV 59 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCCh---HHhhHHHhCCCccccEEEE
Confidence 46788888998 88888888 455666666554331 1111123567788999985
No 165
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=85.08 E-value=0.47 Score=31.37 Aligned_cols=27 Identities=37% Similarity=0.768 Sum_probs=13.7
Q ss_pred CCCeeEe--CCEEeehhHHHHHHHHHhhc
Q 027956 52 ELPVIQD--GDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 52 ~~P~l~~--~~~~l~es~~I~~yL~~~~~ 78 (216)
.-|.|.+ +|+.++|+.||+||+..-|-
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcC
Confidence 4588864 57899999999999999874
No 166
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=82.62 E-value=1.6 Score=28.46 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=22.0
Q ss_pred eCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 6 YGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 6 y~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
|+.+.|.. ++++-.|+..|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999 99999999999999998774
No 167
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=82.49 E-value=1.5 Score=32.47 Aligned_cols=60 Identities=12% Similarity=0.156 Sum_probs=46.5
Q ss_pred HhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHhcchhHHH
Q 027956 140 GKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKK 206 (216)
Q Consensus 140 ~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 206 (216)
.+.++.++.+|.++.|..|.+++-+|+.++..+..- ... ..+++..+|+.++.+.-++.+
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~e------p~s-~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVE------PQS-ARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccC------cch-hhhhHHHHHHHHHHHHHHHHh
Confidence 566788999999999999999999999988655321 111 457888999998887766654
No 168
>PHA02125 thioredoxin-like protein
Probab=71.43 E-value=19 Score=21.38 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=35.3
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG 59 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~ 59 (216)
+.+|+.++|+. ..+.-.|+ ++.+....++... .++......-..+|++.++
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~----~~~l~~~~~v~~~PT~~~g 53 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTDE----GVELTAKHHIRSLPTLVNT 53 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCCC----CHHHHHHcCCceeCeEECC
Confidence 78999999999 88777775 4566666665432 3455555556689999843
No 169
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=60.53 E-value=27 Score=26.04 Aligned_cols=64 Identities=8% Similarity=0.069 Sum_probs=45.9
Q ss_pred CCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHH
Q 027956 7 GPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYY 73 (216)
Q Consensus 7 ~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL 73 (216)
..|.|++ +++--.|+..|++|....|--. +.-+...+..+...+.|=|-.+|.-+-+. .|+.-+
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdIL~D--eelRqglK~fSdWPTfPQlyI~GEFiGGl-DIl~~m 214 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDVLTD--EELRQGLKEFSDWPTFPQLYVKGEFIGGL-DILKEM 214 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEeccCC--HHHHHHhhhhcCCCCccceeECCEeccCc-HHHHHH
Confidence 4578999 9999999999999998877322 22233444567888999999988766554 344333
No 170
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=57.15 E-value=34 Score=29.40 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=35.9
Q ss_pred eEEeCCCCCch-H----HHHHHHHHc-CCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeeh
Q 027956 3 VKVYGPAYASP-K----RVILCLVEK-EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYE 65 (216)
Q Consensus 3 ~~Ly~~~~s~~-~----~v~~~L~~~-gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~e 65 (216)
+++|..++||+ - .+..+..+. +|..+.+.+.. -++......-..+|.++.||.++.+
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~------~~~~~~~~~v~~vP~~~i~~~~~~~ 542 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSH------FPDLKDEYGIMSVPAIVVDDQQVYF 542 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECcc------cHHHHHhCCceecCEEEECCEEEEe
Confidence 56775566655 3 333345555 67777777643 2555555567789999988865443
No 171
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=57.01 E-value=14 Score=31.34 Aligned_cols=60 Identities=8% Similarity=0.050 Sum_probs=35.4
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCC---ceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEI---EFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYES 66 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es 66 (216)
+++|..+.||+ -.+.-++....+ .++...++- ..-+++........||.+..++..+.+.
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~g 184 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDG----ALFQDEVEALGIQGVPAVFLNGEEFHNG 184 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEc----hhCHHHHHhcCCcccCEEEECCcEEEec
Confidence 67887787777 554444433322 233333332 2245566666677899999887665553
No 172
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=51.30 E-value=22 Score=30.22 Aligned_cols=70 Identities=9% Similarity=0.012 Sum_probs=39.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcC---CceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehh----HHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKE---IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYES----RAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~g---i~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es----~~I~~yL~ 74 (216)
+++|..+.||+ -.+.-+++... -..+...++- ..-+++........||.+..++..+.+. ..+++.+.
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~ 195 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDG----ALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLD 195 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEc----hhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHh
Confidence 67888888887 54444333322 2233333332 2245666666677899999887665553 23444554
Q ss_pred Hh
Q 027956 75 EK 76 (216)
Q Consensus 75 ~~ 76 (216)
+.
T Consensus 196 ~~ 197 (517)
T PRK15317 196 TG 197 (517)
T ss_pred cc
Confidence 43
No 173
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.33 E-value=45 Score=27.00 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=75.3
Q ss_pred CCeeEeCCEEeehhHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchH----HHHHHHHHHhcccCCCCCC
Q 027956 53 LPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPA----IYELTIQLLFSSKFGRPVD 128 (216)
Q Consensus 53 ~P~l~~~~~~l~es~~I~~yL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 128 (216)
.+.+.+.+..+.|+.+|...|...-. .-..+-+..++.++-.|+.-+...-.+. +...+....+.. .+...+
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~---~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~-~G~~~d 173 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPE---WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKK-VGEEYD 173 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHH---HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHH-cCCCCc
Confidence 44555667889999999999988742 2233567888889988888554322211 111111111111 133333
Q ss_pred HHHHHHHHHHHHhhHHHHHHhccCCCeecCCCcchhhhcchhhhhhhcCCCCcccccCCC-hhHHHHHHHHhcc
Q 027956 129 EKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDR-KHVSAWWDDISNR 201 (216)
Q Consensus 129 ~~~~~~~~~~~~~~l~~le~~l~~~~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~ 201 (216)
+ ..+...++.+|+...+.+|.....-.-.|.+-.-.++...... ..+..+.- +...++.+|...-
T Consensus 174 ~-------~~i~~~l~~~e~~Y~GdGWY~DG~~~~~DYYns~aih~y~l~~-~~~~~~~~~~~~~~~~~Ra~~f 239 (361)
T PF10022_consen 174 E-------ERIDYDLERIEEWYLGDGWYSDGPEFQFDYYNSWAIHPYLLLY-ARLMGDEDPERAARYRQRAQRF 239 (361)
T ss_pred H-------HHHHHHHHHHHHHhccCCccccCCccCCcchHHHHHHHHHHHH-HHHhcccCHHHHHHHHHHHHHH
Confidence 3 5677788888887777788763334566776643333332211 11110122 2466666666543
No 174
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=43.55 E-value=34 Score=18.40 Aligned_cols=25 Identities=16% Similarity=0.563 Sum_probs=19.8
Q ss_pred hhHHHHHHHHhcchhHHHHHhhcCC
Q 027956 189 KHVSAWWDDISNRPSWKKVLELCKT 213 (216)
Q Consensus 189 p~l~~~~~~~~~~p~~~~~~~~~~~ 213 (216)
..+.++++++.+.|.+++-+.....
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~~~ 28 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKACQN 28 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhcCC
Confidence 4688899999999998888877543
No 175
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=41.25 E-value=32 Score=22.46 Aligned_cols=26 Identities=8% Similarity=0.308 Sum_probs=21.5
Q ss_pred CCeeE-eCCEEeehhHHHHHHHHHhhc
Q 027956 53 LPVIQ-DGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 53 ~P~l~-~~~~~l~es~~I~~yL~~~~~ 78 (216)
+|.+. .++.+++.|..|+++.+..+.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 45555 688999999999999999874
No 176
>PRK09266 hypothetical protein; Provisional
Probab=36.42 E-value=47 Score=25.39 Aligned_cols=60 Identities=22% Similarity=0.151 Sum_probs=40.8
Q ss_pred HHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhhc
Q 027956 19 CLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 19 ~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~~ 78 (216)
.+...|++++...+.+.+-....+-|...+-.|-+||-..++..+.....|.+.|.+.|-
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 455668998888886543222233444445568899999888877655788888877763
No 177
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=34.48 E-value=71 Score=16.44 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=20.2
Q ss_pred CCCCCCeeEeCCEEeehhHHHHHHHH
Q 027956 49 PFGELPVIQDGDFILYESRAIMRYYA 74 (216)
Q Consensus 49 p~~~~P~l~~~~~~l~es~~I~~yL~ 74 (216)
-.|.+|....++........|.+|+.
T Consensus 23 ~~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 23 HEGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred HcCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 35778887777788888888888875
No 178
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=34.23 E-value=43 Score=24.24 Aligned_cols=20 Identities=30% Similarity=0.600 Sum_probs=17.7
Q ss_pred CCEEeehhHHHHHHHHHhhc
Q 027956 59 GDFILYESRAIMRYYAEKYR 78 (216)
Q Consensus 59 ~~~~l~es~~I~~yL~~~~~ 78 (216)
.+..|++|..|-+|+.+.|+
T Consensus 154 ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 154 ADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred CCEEEEcCHHHHHHHHHHcC
Confidence 45669999999999999997
No 179
>PHA03075 glutaredoxin-like protein; Provisional
Probab=30.68 E-value=96 Score=20.59 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=44.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
+.|++-|.|+- ..+.-+|.+..-.|+..+|+..+- | .-.|.+-+|..++. +.=-..+.+|+...+
T Consensus 5 LILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf------F---sK~g~v~~lg~d~~-y~lInn~~~~lgne~ 70 (123)
T PHA03075 5 LILFGKPLCSVCESISEALKELEDEYDILRVNILSF------F---SKDGQVKVLGMDKG-YTLINNFFKHLGNEY 70 (123)
T ss_pred EEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee------e---ccCCceEEEecccc-eehHHHHHHhhcccE
Confidence 88999999999 999999998899999999976521 1 23455666665432 111245677776544
No 180
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=30.12 E-value=1.4e+02 Score=18.59 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=29.6
Q ss_pred eEEeCCCCCch-HHHHHHH--------HHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE
Q 027956 3 VKVYGPAYASP-KRVILCL--------VEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ 57 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L--------~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~ 57 (216)
+..|+.++|+. .+..-.+ ...+ .+....++....+...+++.....-..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 45678899998 7665332 1222 45555555442211123444444556789876
No 181
>KOG0075 consensus GTP-binding ADP-ribosylation factor-like protein [General function prediction only]
Probab=29.39 E-value=1.7e+02 Score=20.54 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=42.4
Q ss_pred CeeEEeCCCCCchHHHHHHHHHcCCceeEEEccCCCC---CCCChhhh---hhCCCCCCCeeEeCC
Q 027956 1 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKG---EQRSPEYL---KLQPFGELPVIQDGD 60 (216)
Q Consensus 1 M~~~Ly~~~~s~~~~v~~~L~~~gi~~~~~~v~~~~~---~~~~~~~~---~~~p~~~~P~l~~~~ 60 (216)
|+++||..++.|..|.++=-...|++.-.-.||.... +-...++. ..+....+|+|+.|.
T Consensus 65 vtiklwD~gGq~rfrsmWerycR~v~aivY~VDaad~~k~~~sr~EL~~LL~k~~l~gip~LVLGn 130 (186)
T KOG0075|consen 65 VTIKLWDLGGQPRFRSMWERYCRGVSAIVYVVDAADPDKLEASRSELHDLLDKPSLTGIPLLVLGN 130 (186)
T ss_pred eEEEEEecCCCccHHHHHHHHhhcCcEEEEEeecCCcccchhhHHHHHHHhcchhhcCCcEEEecc
Confidence 5689999999988888888888898877777765432 22233333 345667899999764
No 182
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=29.22 E-value=1.4e+02 Score=18.35 Aligned_cols=56 Identities=14% Similarity=0.180 Sum_probs=31.9
Q ss_pred eEEeCCCCCch-HHHHHHHHH----cCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE--eCCEE
Q 027956 3 VKVYGPAYASP-KRVILCLVE----KEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ--DGDFI 62 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~--~~~~~ 62 (216)
+.+|+.++|+. ....-.++. .+-.+....++.. ..+++....--..+|.+. .+|.+
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d----~~~~l~~~~~v~~vPt~~i~~~g~~ 79 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDID----EDQEIAEAAGIMGTPTVQFFKDKEL 79 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC----CCHHHHHHCCCeeccEEEEEECCeE
Confidence 56788899998 766655644 1112444455543 234444443446789887 35544
No 183
>PF12062 HSNSD: heparan sulfate-N-deacetylase; InterPro: IPR021930 This family of proteins is are heparan sulphate N-deacetylase enzymes. This protein is found in eukaryotes. This enzyme is often found associated with PF00685 from PFAM. ; GO: 0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity, 0016787 hydrolase activity
Probab=28.59 E-value=1.6e+02 Score=24.82 Aligned_cols=49 Identities=20% Similarity=0.470 Sum_probs=36.7
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCC-----EEeehh
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGD-----FILYES 66 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~-----~~l~es 66 (216)
+.++..-+|.. +.+..+|+...++|+...++ -.|.+|+|.+++ ..|.|.
T Consensus 63 LVFvES~YS~lGq~Iv~ILes~Rf~y~~ei~~---------------~kg~lP~LT~~~kGRy~lII~EN 117 (487)
T PF12062_consen 63 LVFVESQYSQLGQDIVAILESNRFKYKVEIAS---------------GKGDLPVLTDNDKGRYSLIIFEN 117 (487)
T ss_pred EEEEeeccchhhHHHHHHHHhceeeEEEEEcc---------------CCCCCCccccCCCCcEEEEEehh
Confidence 45566667888 99999999999999988773 235689998753 346664
No 184
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=27.10 E-value=1.8e+02 Score=19.18 Aligned_cols=25 Identities=12% Similarity=-0.076 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHHHhhHHHHHHhccC
Q 027956 128 DEKLVKESDEKLGKTLDVYEERLSK 152 (216)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~le~~l~~ 152 (216)
....+-...+........|++.|++
T Consensus 58 ~~~~R~~iirE~Daiv~DLeEVLa~ 82 (113)
T PF12290_consen 58 EFSQRFQIIREADAIVYDLEEVLAS 82 (113)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555667777788888888864
No 185
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=26.54 E-value=1e+02 Score=18.18 Aligned_cols=34 Identities=12% Similarity=0.030 Sum_probs=25.6
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeEEEccC
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFETVPVDL 34 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~ 34 (216)
|..-+..++.... .++.-+|+..|++++.++++.
T Consensus 1 m~~~~i~F~st~~a~~~ek~lk~~gi~~~liP~P~ 35 (73)
T PF11823_consen 1 MKYYLITFPSTHDAMKAEKLLKKNGIPVRLIPTPR 35 (73)
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCcEEEeCCCh
Confidence 4434555566777 899999999999999987743
No 186
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=26.50 E-value=89 Score=17.97 Aligned_cols=24 Identities=13% Similarity=0.439 Sum_probs=18.9
Q ss_pred hhHHHHHHHHhcchhHHHHHhhcC
Q 027956 189 KHVSAWWDDISNRPSWKKVLELCK 212 (216)
Q Consensus 189 p~l~~~~~~~~~~p~~~~~~~~~~ 212 (216)
..|.++++++.+.|.+++-+....
T Consensus 2 e~l~~Fl~~~~~d~~L~~~l~~~~ 25 (64)
T TIGR03798 2 EQLKAFLEKVKTDPDLREKLKAAE 25 (64)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHcC
Confidence 467888999999998888777643
No 187
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=26.22 E-value=54 Score=18.81 Aligned_cols=30 Identities=17% Similarity=0.010 Sum_probs=18.2
Q ss_pred EEeCCCCCch-HHHHHHHHHcCCceeEEEcc
Q 027956 4 KVYGPAYASP-KRVILCLVEKEIEFETVPVD 33 (216)
Q Consensus 4 ~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~ 33 (216)
+||......- ..++-+|+..||++....-.
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 5676666666 89999999999999887554
No 188
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=25.32 E-value=1.6e+02 Score=20.34 Aligned_cols=69 Identities=19% Similarity=0.186 Sum_probs=43.5
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCCceeEEEccCCCCCCCChhhhh-h-CCC--CCCCeeEeCCEEeeh---hHHHHHHHH
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLK-L-QPF--GELPVIQDGDFILYE---SRAIMRYYA 74 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~-~-~p~--~~~P~l~~~~~~l~e---s~~I~~yL~ 74 (216)
+..|.+|.|.. ..-.-.|+.+|...+.+..+.. ...++ + -|. ..-=+.+.+|..|-. ..+|.+.|+
T Consensus 28 ~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~------~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~ 101 (149)
T COG3019 28 MVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDF------LALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLA 101 (149)
T ss_pred EEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcH------HHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHh
Confidence 78999999999 8888888888888877765422 11211 1 011 112234556644333 367888888
Q ss_pred Hhh
Q 027956 75 EKY 77 (216)
Q Consensus 75 ~~~ 77 (216)
+..
T Consensus 102 ~~p 104 (149)
T COG3019 102 EKP 104 (149)
T ss_pred CCC
Confidence 876
No 189
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=24.80 E-value=88 Score=18.95 Aligned_cols=25 Identities=16% Similarity=0.392 Sum_probs=20.5
Q ss_pred CCch-HHHHHHHHHcCCceeEEEccC
Q 027956 10 YASP-KRVILCLVEKEIEFETVPVDL 34 (216)
Q Consensus 10 ~s~~-~~v~~~L~~~gi~~~~~~v~~ 34 (216)
--++ +|+.-+|+..|++|+..+-..
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~PSGI 39 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMPSGI 39 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeecCCC
Confidence 3457 999999999999999986643
No 190
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=23.69 E-value=1.4e+02 Score=17.55 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=29.4
Q ss_pred CCCCeeEeCCEEeehhHHHHHHHHHhhcc-c--CCCCCC----CCHHHHHHHHHHHH
Q 027956 51 GELPVIQDGDFILYESRAIMRYYAEKYRS-Q--GTELLG----KTIEERGLVEQWLE 100 (216)
Q Consensus 51 ~~~P~l~~~~~~l~es~~I~~yL~~~~~~-~--~~~l~p----~~~~~~~~~~~~~~ 100 (216)
.+=||+.-.| ..+|-.+|.++|.+..+. + +..+.. .+...+..+++|..
T Consensus 14 M~dPVi~~~G-~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~ 69 (73)
T PF04564_consen 14 MRDPVILPSG-HTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCA 69 (73)
T ss_dssp -SSEEEETTS-EEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHH
T ss_pred hhCceeCCcC-CEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHH
Confidence 4558887666 889999999999994321 1 111111 13345667777664
No 191
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=23.62 E-value=1.6e+02 Score=17.08 Aligned_cols=53 Identities=23% Similarity=0.330 Sum_probs=32.4
Q ss_pred eEEeCCCCCch-HHHHHHHHH-----cCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeE--eCCE
Q 027956 3 VKVYGPAYASP-KRVILCLVE-----KEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQ--DGDF 61 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~--~~~~ 61 (216)
+..++.++|+. ....-.+.. .++.+-.+.++- ..++........+|++. .+|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVDE------NPELAEEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECCC------ChhHHHhcCcccccEEEEEECCE
Confidence 55677888988 777777766 555555544432 23444444556789877 3554
No 192
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=23.04 E-value=91 Score=18.97 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=26.9
Q ss_pred CeecCCCcchhhhcchhhhhhhcCCCCcccccCCChhHHHHHHHHh
Q 027956 154 KYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDIS 199 (216)
Q Consensus 154 ~fl~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~ 199 (216)
+|+. .+++ |+..|+.+.++........- +.--++..|++++.
T Consensus 35 ky~t--~l~~-DvL~~~ll~~L~~~~r~~~k-~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 35 KYFT--DLGY-DVLTFCLLERLSNPGRSRLK-DDGTNISQWLQSLA 76 (77)
T ss_pred hhcc--hhhH-HHHHHHHHHHHhcccchhcC-cCCCCHHHHHHHHh
Confidence 5553 2333 88888888887654433332 44578999998864
No 193
>PF14811 TPD: Protein of unknown function TPD sequence-motif
Probab=22.59 E-value=43 Score=23.01 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 14 KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 14 ~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
..+.-.|...||+|.+...--..|.+++|+++-. +|+.+.+. ++.+++.+.
T Consensus 37 ~~L~~~L~~~gi~f~tE~~lR~~g~~kTPDi~l~-----~Pi~i~g~--------~V~WIESKa 87 (139)
T PF14811_consen 37 VILEKYLRKLGIPFLTEDDLRARGYDKTPDIKLE-----VPIAINGH--------VVNWIESKA 87 (139)
T ss_pred HHHHHHHHHCCCccccHHHHHHcCCCCCCCEEec-----CCceECCe--------EEeeeehhh
Confidence 4567788999999988765444455556665432 56666444 555666664
No 194
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=22.41 E-value=3.6e+02 Score=20.64 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHhhHH
Q 027956 65 ESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLD 144 (216)
Q Consensus 65 es~~I~~yL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (216)
|...|-..+.+.... ..-|+|++..+.|..-+..--...+-+...++ ..+...+++..-++
T Consensus 5 E~qLI~~lf~RL~~a---e~~prD~eAe~lI~~~~~~qP~A~Y~laQ~vl----------------vQE~AL~~a~~ri~ 65 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQA---EAQPRDPEAEALIAQALARQPDAPYYLAQTVL----------------VQEQALKQAQARIQ 65 (247)
T ss_pred HHHHHHHHHHHHHhc---cCCCCCHHHHHHHHHHHHhCCchHHHHHHHHH----------------HHHHHHHHHHHHHH
Confidence 445566666666532 23388988888887766644433332222222 22445566666677
Q ss_pred HHHHhc
Q 027956 145 VYEERL 150 (216)
Q Consensus 145 ~le~~l 150 (216)
.||..|
T Consensus 66 eLe~ql 71 (247)
T PF09849_consen 66 ELEAQL 71 (247)
T ss_pred HHHHHH
Confidence 777776
No 195
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism]
Probab=21.75 E-value=1.5e+02 Score=21.25 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=25.7
Q ss_pred CeeEEeCCCCCch-HHHHHHHHHcCCceeE
Q 027956 1 MVVKVYGPAYASP-KRVILCLVEKEIEFET 29 (216)
Q Consensus 1 M~~~Ly~~~~s~~-~~v~~~L~~~gi~~~~ 29 (216)
|.+++-+.|+|+- --.+.+.++.|+++-.
T Consensus 1 m~ItIsG~pGsG~TTva~~lAe~~gl~~vs 30 (179)
T COG1102 1 MVITISGLPGSGKTTVARELAEHLGLKLVS 30 (179)
T ss_pred CEEEeccCCCCChhHHHHHHHHHhCCceee
Confidence 6789999999999 9999999999998754
No 196
>PF12728 HTH_17: Helix-turn-helix domain
Probab=21.65 E-value=1.4e+02 Score=15.77 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=22.6
Q ss_pred CCCCCCCeeEeCCEEeehhHHHHHHHHHh
Q 027956 48 QPFGELPVIQDGDFILYESRAIMRYYAEK 76 (216)
Q Consensus 48 ~p~~~~P~l~~~~~~l~es~~I~~yL~~~ 76 (216)
--.+.+|.+..++.....-..|.+|+.++
T Consensus 22 ~~~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 22 IRQGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred HHcCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 34667888887788888888888888763
No 197
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=21.38 E-value=2.4e+02 Score=18.20 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=18.2
Q ss_pred EeCCCCCch-HHHHHHHHHcCCceeEE
Q 027956 5 VYGPAYASP-KRVILCLVEKEIEFETV 30 (216)
Q Consensus 5 Ly~~~~s~~-~~v~~~L~~~gi~~~~~ 30 (216)
|...+..|. .-++.+.+++|+|.+..
T Consensus 60 LVr~~~~pd~~Hl~~LA~ekgVpVe~~ 86 (100)
T PF15608_consen 60 LVRDPDDPDLAHLLLLAEEKGVPVEVY 86 (100)
T ss_pred EECCCCCccHHHHHHHHHHcCCcEEEe
Confidence 445566677 77777777888877664
No 198
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=21.11 E-value=62 Score=24.98 Aligned_cols=64 Identities=9% Similarity=-0.072 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEe----ehhHHHHHHHHHhh
Q 027956 14 KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFIL----YESRAIMRYYAEKY 77 (216)
Q Consensus 14 ~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l----~es~~I~~yL~~~~ 77 (216)
+.+.-+++..|++.+...+.+..-....+-|...+..+-+||-..++..+ .....|.+.|.+.+
T Consensus 206 ~~v~~~~~~~Gi~v~e~~i~~~~l~~ade~f~~ns~~gi~pV~~i~~~~~~~~~~~~gp~~~~l~~~~ 273 (279)
T cd01557 206 DSILELARDLGIKVEERPITRDELYEADEVFATGTAAVVTPVGEIDYRGKEPGEGEVGPVTKKLYDLL 273 (279)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEEecceeEEEEEEEEccccccCCCCCCCHHHHHHHHHH
Confidence 33444567779999998886543222233444445567789998877665 34566666665554
No 199
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=20.92 E-value=1.2e+02 Score=23.12 Aligned_cols=58 Identities=17% Similarity=0.117 Sum_probs=37.8
Q ss_pred HHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEeehhHHHHHHHHHhh
Q 027956 19 CLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY 77 (216)
Q Consensus 19 ~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l~es~~I~~yL~~~~ 77 (216)
.++..|++++...+.+..-....+-|...+-.+-+||...++..+ ++..+.+.|.+.+
T Consensus 208 ~~~~~g~~v~e~~i~~~dL~~adevfltns~~gi~pV~~id~~~~-~~g~~~~~l~~~~ 265 (268)
T PRK06092 208 LLAQSGYPVVEVDASLEELLQADEVFICNSLMPVWPVRAIGETSY-SSGTLTRYLQPLC 265 (268)
T ss_pred HHHHcCCeEEEEECCHHHHhhCCEEEEeCCcceEEEEEEECCEEc-cchHHHHHHHHHH
Confidence 456678999999886543222234444445568889999887765 3457777776554
No 200
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=20.84 E-value=3.5e+02 Score=19.83 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=32.0
Q ss_pred eEEeCCCCCch-HHHHHHHHHcCC---ceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeC
Q 027956 3 VKVYGPAYASP-KRVILCLVEKEI---EFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDG 59 (216)
Q Consensus 3 ~~Ly~~~~s~~-~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~ 59 (216)
+++|+.++|++ ..+.-+++..-- ......++.. ..++......-..+|.+..+
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~----~~~~~~~~~~V~~vPtl~i~ 193 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEAN----ENPDLAEKYGVMSVPKIVIN 193 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCC----CCHHHHHHhCCccCCEEEEe
Confidence 56788999998 777766664321 2233334433 23455555556679999854
No 201
>PRK11508 sulfur transfer protein TusE; Provisional
Probab=20.77 E-value=78 Score=20.74 Aligned_cols=20 Identities=10% Similarity=0.408 Sum_probs=10.3
Q ss_pred hHHHHHHHHhcchhHHHHHh
Q 027956 190 HVSAWWDDISNRPSWKKVLE 209 (216)
Q Consensus 190 ~l~~~~~~~~~~p~~~~~~~ 209 (216)
-+++|+++....|.++..++
T Consensus 49 ~lR~~y~e~~~~P~~R~l~K 68 (109)
T PRK11508 49 FVRDFYLEFNTSPAIRMLVK 68 (109)
T ss_pred HHHHHHHHHCCCCcHHHHHH
Confidence 34555555555555555444
No 202
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=20.41 E-value=91 Score=23.49 Aligned_cols=60 Identities=20% Similarity=0.102 Sum_probs=37.3
Q ss_pred HHHHHHHcCCceeEEEccCCCCCCCChhhhhhCCCCCCCeeEeCCEEe--ehhHHHHHHHHH
Q 027956 16 VILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFIL--YESRAIMRYYAE 75 (216)
Q Consensus 16 v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~~P~l~~~~~~l--~es~~I~~yL~~ 75 (216)
+.=.++..|++++...+.+..-....+-|...+..+-+|+-..++..+ .....|.+.|-+
T Consensus 193 vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns~~gv~pV~~i~~~~~~~~~~~~~~~~l~~ 254 (256)
T cd00449 193 VIELAKELGIKVEERPISLDELYAADEVFLTGTAAEVTPVTEIDGRGIGDGKPGPVTRKLRE 254 (256)
T ss_pred HHHHHHHcCCeEEEEecCHHHHhhCCEEEEccccceEEEEEEECCeecCCCCCCHHHHHHHH
Confidence 333566778999988886543222233444445567889999887665 344566666644
Done!