BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027959
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486
PE=2 SV=1
Length = 224
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 133/168 (79%)
Query: 18 TQVVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFI 77
T V LNVYDLTPVN+Y YWFG GIFHSGIE H EY +GAH++P SGV+EVEPR+CPGFI
Sbjct: 26 TPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFI 85
Query: 78 YRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWV 137
+R S+LLG +M S+FR+++E + +YHGDTY+LI+KNCNHFT+++ +LTGK IPGW+
Sbjct: 86 FRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWI 145
Query: 138 NRLARLGALCGCLLPESLQATTVKQLPEYHDCTEEDGSESLSTATPRE 185
NRLAR+G+ C CLLPES+Q T V LPE + ++ED S S +++ E
Sbjct: 146 NRLARVGSFCNCLLPESIQLTAVSALPERLEFSDEDESNSEASSVSDE 193
>sp|Q9D291|DESI2_MOUSE Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=2 SV=1
Length = 194
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 13/159 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQLPE 165
W+NRLA + L C L P +LQ++ ++L +
Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
>sp|Q5XIT6|DESI2_RAT Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2
SV=1
Length = 194
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
W+NRLA + L C L P +LQ++ ++L
Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
>sp|Q5R456|DESI2_PONAB Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1
Length = 194
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
W+NRLA + L C L P +LQ++ ++L
Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
>sp|Q9BSY9|DESI2_HUMAN Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1
Length = 194
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
W+NRLA + L C L P +LQ++ ++L
Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
>sp|A3QRX8|DESI2_PIG Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1
Length = 194
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
W+NRLA + L C L P +LQ++ ++L
Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
>sp|Q5PQ09|DESI2_XENLA Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1
Length = 192
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
++LNVYD+ +N YT G G+FHSGI+V+G+E+ +G H +P SGVFE+ P
Sbjct: 6 IILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDT 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +I LG + ++ IE EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 66 FKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 125
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
WVNRLA L C L P +LQ++ ++L
Sbjct: 126 WVNRLAYFSTCVPFLQSCLPKEWLTPAALQSSISQEL 162
>sp|Q5ZIV7|DESI2_CHICK Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1
Length = 193
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
V+LNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 6 VILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E E+ G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 66 FKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPR 125
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
WVNRLA + L C L P +LQ++ ++L
Sbjct: 126 WVNRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 162
>sp|Q6DC39|DESI2_DANRE Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1
Length = 196
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 13/157 (8%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
V+LNVYD+ +N +T G G+FHSGIE++G+E+ +G H +P SG+FE+ P
Sbjct: 6 VILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGET 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +I+LG + + +E EY G+ Y+L+ KNCNHF+ ++ L G+ IP
Sbjct: 66 FKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPR 125
Query: 136 WVNRLARLGA----LCGC-----LLPESLQATTVKQL 163
WVNRLA + L C L P +LQ++ ++L
Sbjct: 126 WVNRLAYFSSCVPFLQSCLPKEWLTPAALQSSVSQEL 162
>sp|Q8X1T0|HAG1_SCHPO DeSI-like protein hag1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hag1 PE=1 SV=1
Length = 201
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Query: 19 QVVLNVYDL---TPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVS-GVFEVEPRS-C 73
+V +NVYDL +PVN + G GI+H+G+ + GKEY FGAH+ P S GVF PR
Sbjct: 2 KVYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPL 61
Query: 74 PGFIYRASILLGRINMP-PSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKH 132
G +R SI L +P P R I S E+ G +Y+L+ +NCNHFT+ A LTG
Sbjct: 62 EGCRWRCSIALPNCTLPKPDVDRILIRLS-QEFTGLSYSLLERNCNHFTNAAAIELTGSP 120
Query: 133 IPGWVNRLARLG 144
IP ++NR++R+G
Sbjct: 121 IPSFLNRISRIG 132
>sp|Q6ICB0|DESI1_HUMAN Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1
Length = 168
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 40 GIFHSGIEVHGKEYGFGAHDF---PVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRT 96
GI+H+ I VH E+ FG+ P G P S + +G + F
Sbjct: 35 GIWHTSIVVHKDEFFFGSGGISSCPPGGTLLGPPDSV--------VDVGSTEVTEEIFLE 86
Query: 97 FIE-CSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
++ S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 87 YLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q4KM30|DESI1_RAT Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2
SV=1
Length = 168
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 40 GIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRTFIE 99
GI+H+ I VH E+ FG+ SG+ P + + +G + F ++
Sbjct: 35 GIWHTSIVVHKDEFFFGS-----SGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLS 89
Query: 100 -CSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 90 SLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q9CQT7|DESI1_MOUSE Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1
Length = 168
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 40 GIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRTFIE 99
GI+H+ I VH E+ FG+ SG+ P + + +G + F ++
Sbjct: 35 GIWHTSIVVHKDEFFFGS-----SGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLS 89
Query: 100 -CSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 90 SLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q6GLM5|DESI1_XENLA Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1
Length = 169
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 103 SEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G++Y+L NCN F++++A LTGK IP ++ L
Sbjct: 95 SGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITEL 132
>sp|Q9M3E5|LRK11_ARATH Putative L-type lectin-domain containing receptor kinase I.1
OS=Arabidopsis thaliana GN=LECRK11 PE=3 SV=1
Length = 682
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 127 RLTGKHIPGWVNRLARLGALCGCLLPES 154
RL GK +PG V + +LG LC ++PE+
Sbjct: 578 RLRGKFVPGEVEMVLKLGLLCTSIIPEA 605
>sp|A6WZQ6|MURG_OCHA4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Ochrobactrum anthropi (strain ATCC 49188
/ DSM 6882 / NCTC 12168) GN=murG PE=3 SV=1
Length = 375
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 173 DGSESLSTATPRESTEMDDNDQEKLLVTSSAGTGEVAFVREATK 216
G++ STA P + D D+ +LL+T A + A VREA K
Sbjct: 194 QGAQFFSTAIPAAVALLPDRDRARLLITQQARKEDEAAVREAYK 237
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 40/167 (23%)
Query: 73 CPGFIY-----------RASILLGRINMPPSEFRTFIECSASEYHGDTYNLIS-KNCNHF 120
CPG +Y + + + +I P +E + EY TY + S +N F
Sbjct: 362 CPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDF 421
Query: 121 TDDIAWRLTGKHIPGWVNRLARLGALC-------------------GCLLPESLQATTVK 161
+ +A+R TGK + G L +G + + P+ L +++++
Sbjct: 422 LEKLAFR-TGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEPLVAPQLLPSSSLE 480
Query: 162 QLPEY------HDCTEE--DGSESLSTATPRESTEMDDNDQEKLLVT 200
+PE + TE +GSES+ E++ D N + + ++T
Sbjct: 481 VVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTEMQQILT 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,743,275
Number of Sequences: 539616
Number of extensions: 3402427
Number of successful extensions: 7792
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7763
Number of HSP's gapped (non-prelim): 20
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)