Query 027960
Match_columns 216
No_of_seqs 261 out of 1867
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:59:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tsh_A Pollen allergen PHL P 4 100.0 1.5E-40 5.1E-45 303.7 19.7 184 30-216 6-191 (500)
2 3vte_A Tetrahydrocannabinolic 100.0 1.6E-39 5.4E-44 297.4 20.0 185 31-216 3-190 (518)
3 3fw9_A Reticuline oxidase; BI- 100.0 2E-39 6.8E-44 295.7 18.6 182 34-216 1-182 (495)
4 3rja_A Carbohydrate oxidase; p 100.0 6E-34 2E-38 258.5 17.0 171 34-216 2-173 (473)
5 2wdx_A Putative hexose oxidase 100.0 1.5E-33 5.1E-38 258.7 16.8 167 36-215 24-193 (523)
6 2ipi_A Aclacinomycin oxidoredu 100.0 1.6E-33 5.5E-38 258.4 16.9 172 31-215 17-191 (521)
7 2bvf_A 6-hydroxy-D-nicotine ox 100.0 5.1E-33 1.7E-37 251.5 18.6 159 47-216 13-171 (459)
8 3pop_A GILR oxidase; FAD bindi 100.0 3.9E-33 1.3E-37 254.6 16.6 158 47-214 9-169 (501)
9 2y3s_A TAML; oxidoreductase; H 100.0 7.2E-33 2.4E-37 254.5 17.0 172 34-215 16-194 (530)
10 1zr6_A Glucooligosaccharide ox 100.0 2E-32 7E-37 250.2 16.9 173 31-216 5-177 (503)
11 4bby_A Alkyldihydroxyacetoneph 100.0 3.6E-29 1.2E-33 235.2 14.9 145 71-216 198-346 (658)
12 1w1o_A Cytokinin dehydrogenase 99.9 8.1E-28 2.8E-32 221.1 14.0 172 31-216 30-211 (534)
13 3pm9_A Putative oxidoreductase 99.9 9.8E-28 3.3E-32 217.8 14.0 143 70-216 43-188 (476)
14 2i0k_A Oxidoreductase; MIX alp 99.9 1.5E-27 5E-32 220.6 11.6 159 47-214 9-185 (561)
15 2uuu_A Alkyldihydroxyacetoneph 99.9 2.6E-26 9E-31 212.9 15.1 139 75-216 134-277 (584)
16 4feh_A Oxidoreductase DPRE1; a 99.9 3.8E-26 1.3E-30 207.5 14.5 140 70-216 35-179 (481)
17 3js8_A Cholesterol oxidase; ch 99.9 1.9E-26 6.5E-31 210.9 12.4 155 51-214 8-179 (540)
18 1wvf_A 4-cresol dehydrogenase 99.9 1.6E-25 5.5E-30 205.2 16.4 136 76-216 54-194 (520)
19 2exr_A Cytokinin dehydrogenase 99.9 9E-26 3.1E-30 207.1 13.3 142 70-216 53-204 (524)
20 2vfr_A Xylitol oxidase, aldito 99.9 1.2E-25 4E-30 201.3 13.1 138 70-216 12-151 (422)
21 1e8g_A Vanillyl-alcohol oxidas 99.9 7.3E-25 2.5E-29 202.5 16.7 138 76-216 68-210 (560)
22 1f0x_A DLDH, D-lactate dehydro 99.9 2.4E-25 8.2E-30 205.7 8.1 137 76-216 43-203 (571)
23 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.3E-23 4.6E-28 182.2 11.4 130 76-216 46-176 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 2.8E-23 9.5E-28 179.8 10.6 130 76-216 52-182 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.8 6.1E-21 2.1E-25 167.0 9.4 130 76-216 28-161 (357)
26 1uxy_A MURB, uridine diphospho 99.8 4.3E-20 1.5E-24 160.9 12.1 129 77-216 13-145 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 1E-18 3.5E-23 147.5 7.8 118 78-216 22-140 (268)
28 2yvs_A Glycolate oxidase subun 99.3 1E-12 3.4E-17 107.8 5.5 73 136-216 1-75 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 7.2E-07 2.5E-11 75.6 5.3 126 78-214 4-144 (287)
30 1n62_C Carbon monoxide dehydro 97.8 2.1E-05 7.1E-10 66.6 5.2 105 78-188 4-120 (288)
31 2w3s_A Xanthine dehydrogenase; 97.6 4.1E-05 1.4E-09 68.9 4.0 120 81-214 179-313 (462)
32 1t3q_C Quinoline 2-oxidoreduct 97.2 0.00049 1.7E-08 58.1 6.0 103 78-187 4-118 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.3 0.0058 2E-07 51.9 5.8 80 78-161 9-90 (305)
34 3hrd_C Nicotinate dehydrogenas 96.0 0.011 3.6E-07 50.1 6.0 77 79-158 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 94.3 0.1 3.6E-06 44.5 7.1 76 78-159 5-84 (324)
36 3unc_A Xanthine dehydrogenase/ 90.0 0.33 1.1E-05 48.9 5.4 80 78-161 232-313 (1332)
37 3zyv_A AOH1; oxidoreductase, m 75.7 3.9 0.00013 41.3 6.0 78 81-162 242-321 (1335)
38 1xty_A PTH, peptidyl-tRNA hydr 73.6 4.1 0.00014 29.4 4.2 37 76-112 52-89 (120)
39 1wn2_A Peptidyl-tRNA hydrolase 63.2 15 0.0005 26.4 5.4 37 76-112 53-90 (121)
40 1rzw_A Protein AF2095(GR4); be 61.8 13 0.00045 26.9 4.9 38 76-113 46-84 (123)
41 1rlk_A Hypothetical protein TA 61.5 15 0.0005 26.2 5.1 37 76-112 49-86 (117)
42 2zv3_A PTH, peptidyl-tRNA hydr 60.7 14 0.00048 26.2 4.9 37 76-112 47-84 (115)
43 3p04_A Uncharacterized BCR; SE 52.9 17 0.00058 24.6 3.9 34 80-135 7-40 (87)
44 1q7s_A BIT1, protein CGI-147; 50.3 28 0.00094 24.7 5.0 37 76-112 49-86 (117)
45 2g2c_A Putative molybdenum cof 47.1 41 0.0014 25.1 5.8 40 80-119 47-86 (167)
46 2ozl_B PDHE1-B, pyruvate dehyd 46.9 18 0.00062 30.6 4.1 33 78-110 151-184 (341)
47 1qs0_B 2-oxoisovalerate dehydr 42.8 23 0.00078 29.7 4.1 30 78-107 141-171 (338)
48 1yht_A DSPB; beta barrel, hydr 42.8 17 0.00059 31.1 3.3 28 86-113 92-121 (367)
49 1umd_B E1-beta, 2-OXO acid deh 42.3 27 0.00092 29.1 4.4 31 78-108 140-171 (324)
50 1mkz_A Molybdenum cofactor bio 42.0 55 0.0019 24.6 5.8 39 80-118 46-85 (172)
51 1w85_B Pyruvate dehydrogenase 41.6 26 0.0009 29.2 4.3 31 78-108 139-170 (324)
52 3rfq_A Pterin-4-alpha-carbinol 40.9 58 0.002 25.0 5.8 39 80-118 67-105 (185)
53 2pjk_A 178AA long hypothetical 39.9 58 0.002 24.7 5.7 38 80-117 58-96 (178)
54 1uuy_A CNX1, molybdopterin bio 39.8 64 0.0022 24.0 5.9 40 80-119 48-88 (167)
55 2is8_A Molybdopterin biosynthe 39.5 65 0.0022 23.9 5.9 40 80-119 39-79 (164)
56 2lnd_A De novo designed protei 38.8 45 0.0015 22.3 4.2 33 81-113 30-62 (112)
57 2crl_A Copper chaperone for su 38.7 80 0.0027 20.9 5.8 31 135-165 48-78 (98)
58 1ik6_A Pyruvate dehydrogenase; 38.7 28 0.00097 29.7 4.1 31 78-108 187-218 (369)
59 3pzy_A MOG; ssgcid, seattle st 38.5 54 0.0018 24.5 5.2 37 81-118 46-82 (164)
60 2bfd_B 2-oxoisovalerate dehydr 37.7 30 0.001 29.1 4.0 31 78-108 157-188 (342)
61 2yl5_A Beta-N-acetylhexosamini 35.0 25 0.00085 30.9 3.2 28 86-113 92-121 (442)
62 2yl6_A Beta-N-acetylhexosamini 33.8 23 0.0008 31.0 2.8 27 87-113 90-118 (434)
63 2pbq_A Molybdenum cofactor bio 33.5 90 0.0031 23.4 5.9 40 80-119 45-85 (178)
64 1y5e_A Molybdenum cofactor bio 33.4 83 0.0028 23.4 5.6 38 80-117 49-87 (169)
65 2ox1_A 3-dehydroquinate dehydr 33.3 87 0.003 24.1 5.8 53 53-112 101-153 (196)
66 4gnr_A ABC transporter substra 33.2 60 0.002 26.3 5.2 52 50-110 177-228 (353)
67 1jlj_A Gephyrin; globular alph 32.5 94 0.0032 23.7 5.9 40 80-119 55-95 (189)
68 1di6_A MOGA, molybdenum cofact 32.1 1E+02 0.0034 23.8 6.0 40 80-119 43-83 (195)
69 3bzy_B ESCU; auto cleavage pro 31.3 81 0.0028 20.9 4.6 36 70-106 9-44 (83)
70 3td9_A Branched chain amino ac 30.5 91 0.0031 25.3 5.9 51 51-110 186-236 (366)
71 2gjx_A Beta-hexosaminidase alp 30.5 34 0.0012 30.6 3.3 29 86-114 212-242 (507)
72 2egz_A 3-dehydroquinate dehydr 29.6 47 0.0016 26.1 3.7 35 78-112 140-174 (219)
73 1now_A Beta-hexosaminidase bet 29.5 36 0.0012 30.5 3.3 29 86-114 217-247 (507)
74 4a4j_A Pacszia, cation-transpo 29.5 90 0.0031 18.4 4.6 30 136-165 33-64 (69)
75 3rcn_A Beta-N-acetylhexosamini 29.3 36 0.0012 30.8 3.3 28 86-113 221-250 (543)
76 3gh5_A HEX1, beta-hexosaminida 28.3 37 0.0013 30.6 3.2 28 86-113 253-282 (525)
77 1jak_A Beta-N-acetylhexosamini 28.0 40 0.0014 30.2 3.3 28 86-113 228-257 (512)
78 3lop_A Substrate binding perip 27.4 1.4E+02 0.0047 24.2 6.5 52 50-110 177-228 (364)
79 3ced_A Methionine import ATP-b 27.1 93 0.0032 21.0 4.5 25 85-109 71-96 (98)
80 3kbq_A Protein TA0487; structu 26.7 1.2E+02 0.004 22.9 5.4 38 80-118 41-78 (172)
81 2o1x_A 1-deoxy-D-xylulose-5-ph 26.5 55 0.0019 30.0 4.0 36 78-113 446-482 (629)
82 3lkb_A Probable branched-chain 25.6 1.2E+02 0.004 24.9 5.8 52 51-111 180-231 (392)
83 2ki0_A DS119; beta-alpha-beta, 25.5 37 0.0013 18.3 1.6 23 85-107 11-33 (36)
84 2nu8_A Succinyl-COA ligase [AD 25.4 63 0.0022 26.4 3.9 79 78-165 89-169 (288)
85 3ozo_A N-acetylglucosaminidase 25.4 47 0.0016 30.3 3.3 29 86-114 253-283 (572)
86 3iwl_A Copper transport protei 25.3 1.1E+02 0.0039 18.1 4.8 31 135-165 30-60 (68)
87 3l84_A Transketolase; TKT, str 25.2 60 0.002 29.9 4.0 33 78-110 465-498 (632)
88 3ipc_A ABC transporter, substr 24.9 1.3E+02 0.0045 24.1 5.9 51 51-110 175-225 (356)
89 2gax_A Hypothetical protein AT 24.9 81 0.0028 22.9 4.0 33 76-109 54-86 (135)
90 2vt1_B Surface presentation of 24.6 89 0.003 21.3 3.9 36 70-106 9-44 (93)
91 1cc8_A Protein (metallochapero 24.2 1.1E+02 0.0037 18.4 4.1 31 135-165 35-65 (73)
92 3m05_A Uncharacterized protein 24.1 25 0.00085 25.1 1.0 33 78-110 8-40 (114)
93 3hut_A Putative branched-chain 23.9 1.3E+02 0.0045 24.1 5.7 51 51-110 176-226 (358)
94 2o1s_A 1-deoxy-D-xylulose-5-ph 23.4 68 0.0023 29.3 4.0 36 78-113 443-480 (621)
95 2epl_X N-acetyl-beta-D-glucosa 23.0 55 0.0019 30.2 3.3 28 86-113 142-171 (627)
96 3uk1_A Transketolase; structur 22.8 70 0.0024 29.9 4.0 33 78-110 531-564 (711)
97 2kng_A Protein LSR2; DNA-bindi 22.8 24 0.00081 21.8 0.6 21 89-109 13-33 (55)
98 4gqr_A Pancreatic alpha-amylas 21.9 62 0.0021 27.7 3.3 22 86-107 74-95 (496)
99 2ohw_A YUEI protein; structura 21.1 1.8E+02 0.006 21.1 5.2 33 80-112 66-99 (133)
100 2e2s_A Agelenin; cystine knot, 20.9 28 0.00095 19.2 0.5 7 3-9 5-11 (36)
101 3dhx_A Methionine import ATP-b 20.9 1.5E+02 0.0053 20.1 4.7 28 82-109 69-96 (106)
102 2hep_A UPF0291 protein YNZC; S 20.8 21 0.00071 24.1 0.0 20 197-216 43-62 (85)
103 4e8j_A Lincosamide resistance 20.4 65 0.0022 24.3 2.7 60 86-165 6-68 (161)
104 3m49_A Transketolase; alpha-be 20.2 85 0.0029 29.2 4.0 33 78-110 510-544 (690)
No 1
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.5e-40 Score=303.74 Aligned_cols=184 Identities=48% Similarity=0.900 Sum_probs=170.1
Q ss_pred CchhhHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEc
Q 027960 30 ENHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 30 ~~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~g 109 (216)
...++|++||...++ +..|++|+++.|...+.+|++|.||+.....+|.+||+|++++||+++|++|+++++||++||
T Consensus 6 ~~~~~f~~~L~~~~~--~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~ 83 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP--PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRS 83 (500)
T ss_dssp ---CHHHHHHHHHSC--GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEES
T ss_pred ccHHHHHHHHHhhCC--CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 455789999999876 678999999999999999999999999989999999999999999999999999999999999
Q ss_pred CCCCCCCCCccC--CCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccC
Q 027960 110 GGHDLEGLSSIS--DVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGG 187 (216)
Q Consensus 110 gGhs~~g~~~~~--~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~gg 187 (216)
|||++.|.+... .+++++|||++||+|++|+++++++||||++|.||+++|.++|+ ++.+++|.|+++|+||++++|
T Consensus 84 gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~-~~~~~~g~~~~vgvgG~~~~g 162 (500)
T 3tsh_A 84 GGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASP-TLAFPAGVCPTIGVGGNFAGG 162 (500)
T ss_dssp SCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCT-TEECCCCSSTTSBHHHHHHTC
T ss_pred CCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCC-CcccCCCCCCCceecCccccc
Confidence 999988765431 13589999999999999999999999999999999999999988 899999999999999999999
Q ss_pred CCCccccccchHhhheeeEEEECCCCeeC
Q 027960 188 GYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 188 g~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
|+|..+++||+.+|+|+++|||++||+|+
T Consensus 163 g~g~~~~~~G~~~d~v~~~~vV~a~G~i~ 191 (500)
T 3tsh_A 163 GFGMLLRKYGIAAENVIDVKLVDANGKLH 191 (500)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTSCEE
T ss_pred cCCccccccCChhhheeeEEEECCCceEE
Confidence 99999999999999999999999999974
No 2
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.6e-39 Score=297.41 Aligned_cols=185 Identities=57% Similarity=0.975 Sum_probs=170.9
Q ss_pred chhhHHHHhhhcCCC---CCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEE
Q 027960 31 NHENFLKCLSLQSDT---ISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRV 107 (216)
Q Consensus 31 ~~~~~~~cl~~~~~~---~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v 107 (216)
+.++|++||...... .++.|++|+++.|++++.+|++|.||+......|.+|++|++++||+++|++|+++++|+++
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 567899999875431 26789999999999999899999999998889999999999999999999999999999999
Q ss_pred EcCCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccC
Q 027960 108 RSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGG 187 (216)
Q Consensus 108 ~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~gg 187 (216)
|||||++.+.+.....++++|||++|++|++|+++.+++||||++|.+|+++|.++|+ ++.++.|.++++|+||++++|
T Consensus 83 rggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~-gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 83 RSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNE-NLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp ESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCT-TEECCCCSCTTCBHHHHHHTC
T ss_pred ECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCC-CceecCCCCCCeeeeeeeCCC
Confidence 9999999887743223599999999999999999999999999999999999999988 899999999999999999999
Q ss_pred CCCccccccchHhhheeeEEEECCCCeeC
Q 027960 188 GYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 188 g~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
|+|+++++||+.+|+|++++||++||+++
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv 190 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVL 190 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEE
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEE
Confidence 99999999999999999999999999975
No 3
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2e-39 Score=295.67 Aligned_cols=182 Identities=47% Similarity=0.820 Sum_probs=170.0
Q ss_pred hHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 027960 34 NFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 113 (216)
Q Consensus 34 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs 113 (216)
+|++||......+++.|++|+|+.|++++.++++|.||+......|.+|++|++++||+++|++|+++++|+++||||||
T Consensus 1 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~ 80 (495)
T 3fw9_A 1 DLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHS 80 (495)
T ss_dssp CHHHHHHHTTCCCEEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCC
T ss_pred ChhHHHhhcCCCCCCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcC
Confidence 48999998754326789999999999998889999999998899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccCCCCccc
Q 027960 114 LEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALL 193 (216)
Q Consensus 114 ~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s 193 (216)
+.+.+...+.++++|||++|++|++|+++.+++||||+++.+|+++|.++++ |+.++.|.++++|+||++++||+|+.+
T Consensus 81 ~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~-gl~~~~G~~~~vgigG~~~gGg~G~~~ 159 (495)
T 3fw9_A 81 YEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSS-KLGFTAGWCPTVGTGGHISGGGFGMMS 159 (495)
T ss_dssp TTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCS-SEECCCCSCTTCBHHHHHHTCCCCTTH
T ss_pred CCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcC-CceeccCCCCCCeEeeeccCCCCcccc
Confidence 9888776443589999999999999999999999999999999999999987 899999999999999999999999999
Q ss_pred cccchHhhheeeEEEECCCCeeC
Q 027960 194 RKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 194 ~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
++||+.+|+|++++||++||+++
T Consensus 160 ~~~G~~~D~v~~~~vV~adG~i~ 182 (495)
T 3fw9_A 160 RKYGLAADNVVDAILIDANGAIL 182 (495)
T ss_dssp HHHCCGGGGEEEEEEECTTCCEE
T ss_pred cCCCchhheEEEEEEEcCCCCEE
Confidence 99999999999999999999974
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=6e-34 Score=258.49 Aligned_cols=171 Identities=28% Similarity=0.470 Sum_probs=151.9
Q ss_pred hHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 027960 34 NFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 113 (216)
Q Consensus 34 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs 113 (216)
++.+||... ...|+.|+++.|+.++. . |+......|.+|++|++++||+++|++|+++++|+++||||||
T Consensus 2 ~l~~cl~~~----~~~v~~p~~~~y~~~~~--~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 71 (473)
T 3rja_A 2 AIEACLSAA----GVPIDIPGTADYERDVE--P----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHS 71 (473)
T ss_dssp HHHHHHHHT----TCCBCCTTSHHHHHHTC--C----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCC
T ss_pred hHHHHHHhC----CCcEECCCCCchHHHHH--H----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 578899985 33589999999998754 3 4444456999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEccCCceeE-EeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccCCCCcc
Q 027960 114 LEGLSSISDVPFIIVDLINFSEIS-IDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGAL 192 (216)
Q Consensus 114 ~~g~~~~~~~~gvvIdl~~~~~i~-id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~ 192 (216)
+.+.+....+++++|||++|++|. +|+++.+++||||++|.+|+++|.++| ++.+|.|.|+++|+||++++||+|..
T Consensus 72 ~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G--~~~~p~G~~~~vgvgG~~~ggg~G~~ 149 (473)
T 3rja_A 72 YASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY--GRAISHGTCPGVGISGHFAHGGFGFS 149 (473)
T ss_dssp TTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH--SEECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred CCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC--CEEeccCCCCCcEeeeeccCCCCCcc
Confidence 986544322357999999999996 999999999999999999999999995 28899999999999999999999999
Q ss_pred ccccchHhhheeeEEEECCCCeeC
Q 027960 193 LRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 193 s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
+++||+++|+|+++|||++||+++
T Consensus 150 ~~~~G~~~D~v~~~~vV~a~G~v~ 173 (473)
T 3rja_A 150 SHMHGLAVDSVVGVTVVLADGRIV 173 (473)
T ss_dssp HHHHCCGGGGEEEEEEECTTSCEE
T ss_pred cccccchHhheeeEEEEecCCeEE
Confidence 999999999999999999999974
No 5
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.5e-33 Score=258.69 Aligned_cols=167 Identities=28% Similarity=0.501 Sum_probs=148.4
Q ss_pred HHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC
Q 027960 36 LKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLE 115 (216)
Q Consensus 36 ~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~ 115 (216)
..||... ...|+.|+|+.|++++ +..||.+|. ..|.+|++|++++||+++|++|+++++||++|||||++.
T Consensus 24 ~~~l~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~ 94 (523)
T 2wdx_A 24 ERCLPPA----GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFE 94 (523)
T ss_dssp --CCCCC----CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSS
T ss_pred hhhcccC----CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC
Confidence 3677653 4679999999999987 246677884 489999999999999999999999999999999999998
Q ss_pred CCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHh-hCCCceEecCCCCccccchhccccCCCCcccc
Q 027960 116 GLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAE-KSQNLLAFPVGTCPGVGVGGHFSGGGYGALLR 194 (216)
Q Consensus 116 g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~-~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~ 194 (216)
+.+...+ ++++|||++|++|++|+++.+++||||++|.+|+++|.+ + |+.++.|.++++|+||++++||+|++++
T Consensus 95 g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~---Gl~~~~G~~~~vgvgG~~~gGg~g~~s~ 170 (523)
T 2wdx_A 95 DFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGW---NVTIPGGVCGGVGVGGHICGGGYGPLSR 170 (523)
T ss_dssp SSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHH---SCCCCCCCCTTCBHHHHHHHTCCCTTHH
T ss_pred CCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhc---CeEEccCCCCCCeeCccccCCCCCcccc
Confidence 8665432 489999999999999999999999999999999999984 8 5688899999999999999999999999
Q ss_pred ccchHhhheeeEEEECC--CCee
Q 027960 195 KYGVAADHIVDAHMIDA--KGEK 215 (216)
Q Consensus 195 ~~G~~~D~v~~~~vV~~--dG~i 215 (216)
+||+++|+|+++|||++ ||++
T Consensus 171 ~~G~~~D~v~~~evV~~d~~G~v 193 (523)
T 2wdx_A 171 QFGSVVDYLYAVEVVVVNKQGKA 193 (523)
T ss_dssp HHCCGGGGEEEEEEEEECTTSCE
T ss_pred cccChhheEEEEEEEEecCCccE
Confidence 99999999999999995 4985
No 6
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.6e-33 Score=258.42 Aligned_cols=172 Identities=27% Similarity=0.451 Sum_probs=144.7
Q ss_pred chhhHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 31 NHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 31 ~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
..-+-..|+... ...|++|+|+.|++++ +..||.+|. ..|.+|++|++++||+++|++|+++++|+++|||
T Consensus 17 ~~~~~~~~~~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrgg 87 (521)
T 2ipi_A 17 WEFDGGACGART----ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSG 87 (521)
T ss_dssp ----------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred hhccccccccCC----CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 334556787764 4578999999999887 236677774 4899999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHH-hhCCCceEecCCCCccccchhccccCCC
Q 027960 111 GHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIA-EKSQNLLAFPVGTCPGVGVGGHFSGGGY 189 (216)
Q Consensus 111 Ghs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~-~~g~~gl~~~~g~~~~vgvgG~~~ggg~ 189 (216)
||++.+.+...+ ++++|||++|++|++|+++.+|+||||++|.+|+++|. ++ |+.++.|.++.+||||++++||+
T Consensus 88 Gh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~---Gl~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 88 GHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDW---GVTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp CCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHH---SBCCCCCSCTTCBHHHHTTTTCC
T ss_pred CcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhc---CceeCCCCCCCcccCCcccCCCC
Confidence 999987654332 58999999999999999999999999999999999997 78 56888999999999999999999
Q ss_pred CccccccchHhhheeeEEEECCC--Cee
Q 027960 190 GALLRKYGVAADHIVDAHMIDAK--GEK 215 (216)
Q Consensus 190 G~~s~~~G~~~D~v~~~~vV~~d--G~i 215 (216)
|+++++||+++|+|+++|||++| |++
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i 191 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRA 191 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCE
T ss_pred CccccccccHhhcEEEEEEEEecCCccE
Confidence 99999999999999999999976 975
No 7
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=5.1e-33 Score=251.54 Aligned_cols=159 Identities=28% Similarity=0.471 Sum_probs=146.5
Q ss_pred CceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeE
Q 027960 47 SKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFI 126 (216)
Q Consensus 47 ~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gv 126 (216)
++.|+.|+++.|+.++. .|+......|.+|++|++++||+++|++|+++++|+.++|||||+.+.+... +++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--CeE
Confidence 67899999999998643 4666566799999999999999999999999999999999999998766433 489
Q ss_pred EEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccCCCCccccccchHhhheeeE
Q 027960 127 IVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDA 206 (216)
Q Consensus 127 vIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~ 206 (216)
+|||++|++|++|+++.+++||||++|.+|+++|.++ |+.++.|.++.+|+||++++||+|+++++||.++|+|+++
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~---Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKF---GLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTT---TEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHc---CCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 9999999999999999999999999999999999998 6799999999999999999999999999999999999999
Q ss_pred EEECCCCeeC
Q 027960 207 HMIDAKGEKF 216 (216)
Q Consensus 207 ~vV~~dG~iv 216 (216)
|||++||+++
T Consensus 162 ~vV~~~G~i~ 171 (459)
T 2bvf_A 162 TLVTATGDVI 171 (459)
T ss_dssp EEECTTSCEE
T ss_pred EEEcCCCeEE
Confidence 9999999974
No 8
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.9e-33 Score=254.63 Aligned_cols=158 Identities=27% Similarity=0.432 Sum_probs=144.8
Q ss_pred CceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeE
Q 027960 47 SKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFI 126 (216)
Q Consensus 47 ~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gv 126 (216)
++.|++|+|+.|++++. .+|.+| ...|.+|++|++++||+++|++|+++++|+++|||||++.+.+...+ +++
T Consensus 9 ~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~gv 81 (501)
T 3pop_A 9 PPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-RDL 81 (501)
T ss_dssp CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-CSE
T ss_pred CCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-CEE
Confidence 67899999999998864 556666 45999999999999999999999999999999999999988766442 589
Q ss_pred EEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHH-hhCCCceEecCCCCccccchhccccCCCCccccccchHhhheee
Q 027960 127 IVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIA-EKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYGVAADHIVD 205 (216)
Q Consensus 127 vIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~-~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~ 205 (216)
+|||++|++|++|+++++++||||++|.+|+++|. ++ |+.++.|.|+++|+||++++||+|+++++||+++|+|++
T Consensus 82 vIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~---Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 82 VLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRW---NAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHH---SBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhc---CeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 99999999999999999999999999999999997 46 568899999999999999999999999999999999999
Q ss_pred EEEEC--CCCe
Q 027960 206 AHMID--AKGE 214 (216)
Q Consensus 206 ~~vV~--~dG~ 214 (216)
+|||+ +||+
T Consensus 159 ~evV~~da~G~ 169 (501)
T 3pop_A 159 VEVAVVDESRT 169 (501)
T ss_dssp EEEEEECTTSC
T ss_pred EEEEEecCCCC
Confidence 99999 8998
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=7.2e-33 Score=254.49 Aligned_cols=172 Identities=28% Similarity=0.428 Sum_probs=143.4
Q ss_pred hHHHHhhhcCCC----CCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEc
Q 027960 34 NFLKCLSLQSDT----ISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 34 ~~~~cl~~~~~~----~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~g 109 (216)
+...|....... ....|+.|+|+.|++++. .||.+|. ..|.+|++|++++||+++|++|+++++||++||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~g 89 (530)
T 2y3s_A 16 DIPTTENLYFQGSEFMKHIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRS 89 (530)
T ss_dssp ------------------CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cchhHHHHHhhhhhccCCceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 445565553211 134689999999999864 4566774 489999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHh-hCCCceEecCCCCccccchhccccCC
Q 027960 110 GGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAE-KSQNLLAFPVGTCPGVGVGGHFSGGG 188 (216)
Q Consensus 110 gGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~-~g~~gl~~~~g~~~~vgvgG~~~ggg 188 (216)
|||++.+.+...+ ++++|||++|++|++|+++.+|+||||++|.+|+++|.+ + |+.++.|.++++|+||++++||
T Consensus 90 gGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~---Gl~~~~G~~~~vgvgG~~~gGg 165 (530)
T 2y3s_A 90 GGHCYEDFVANSD-VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVW---GVTLPGGACPDVGAGGHILGGG 165 (530)
T ss_dssp SCCCSSSTTTCTT-CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHH---SCCCCCCSCTTCBHHHHHHTTC
T ss_pred CCCCCCCCcccCC-CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhc---CeEEeCCCCCCCCcCCCcCCCC
Confidence 9999987665332 489999999999999999999999999999999999985 7 5688899999999999999999
Q ss_pred CCccccccchHhhheeeEEEEC--CCCee
Q 027960 189 YGALLRKYGVAADHIVDAHMID--AKGEK 215 (216)
Q Consensus 189 ~G~~s~~~G~~~D~v~~~~vV~--~dG~i 215 (216)
+|+++++||+++|+|+++|||+ +||++
T Consensus 166 ~g~~s~~~G~~~D~v~~~evV~~d~~G~i 194 (530)
T 2y3s_A 166 YGPLSRMHGSIVDYLHAVEVVVVDASGDA 194 (530)
T ss_dssp CCTTHHHHCCGGGGEEEEEEEEECTTSCE
T ss_pred CCcccccccchhhheeeEEEEEecCCCcE
Confidence 9999999999999999999999 55986
No 10
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2e-32 Score=250.15 Aligned_cols=173 Identities=25% Similarity=0.475 Sum_probs=151.0
Q ss_pred chhhHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 31 NHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 31 ~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
..++|..|+... ...++.|+++.|..... .|+......|.+|++|++++||+++|++|+++++|+++|||
T Consensus 5 ~~~~l~~~l~~~----~~~~~~~~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 74 (503)
T 1zr6_A 5 EFNSINACLAAA----DVEFHEEDSEGWDMDGT------AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGG 74 (503)
T ss_dssp TTCHHHHHHHHT----TCEECCTTSHHHHHHTS------CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHhhCcC----CceecCCCccchHHHhh------hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 446788888863 23588999999987632 35544456999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccCCCC
Q 027960 111 GHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYG 190 (216)
Q Consensus 111 Ghs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G 190 (216)
||++.+.+....+++++|||++|++|++| ++++++||||++|.+|+++|.+++ ++.+|.|.++.+|+||++++||+|
T Consensus 75 Gh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~--gl~~~~G~~~~vgvgG~~~gGg~g 151 (503)
T 1zr6_A 75 GHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG--NRALSHGTCPAVGVGGHVLGGGYG 151 (503)
T ss_dssp CCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT--SEECCCCSCTTSBHHHHHHHCCCS
T ss_pred CcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC--CEEeCCCCCCcCchhhhhcCCCCC
Confidence 99998755531124899999999999999 888999999999999999997775 589999999999999999999999
Q ss_pred ccccccchHhhheeeEEEECCCCeeC
Q 027960 191 ALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 191 ~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
+++++||+++|+|+++|||++||+++
T Consensus 152 ~~s~~~G~~~D~v~~~~vV~a~G~i~ 177 (503)
T 1zr6_A 152 FATHTHGLTLDWLIGATVVLADASIV 177 (503)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEE
T ss_pred cccccccChhheEEEEEEEecCCCEE
Confidence 99999999999999999999999974
No 11
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.96 E-value=3.6e-29 Score=235.18 Aligned_cols=145 Identities=19% Similarity=0.189 Sum_probs=128.3
Q ss_pred cCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCC---CCeEEEEccCCcee-EEeCCCCeEE
Q 027960 71 FSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD---VPFIIVDLINFSEI-SIDAEAKTAW 146 (216)
Q Consensus 71 w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~---~~gvvIdl~~~~~i-~id~~~~~v~ 146 (216)
|.......|.+||+|+|+|||+++|++|+++++||+++||||++.+...+.. ..+|+|||++||+| ++|+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 5555677999999999999999999999999999999999999876655421 24799999999999 9999999999
Q ss_pred ecCCCcHHHHHHHHHhhCCCceEecCCCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 147 VQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 147 v~aGv~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
||||+++.+|+++|.++|+ .+.+.+++....+|||++++++.|..+.+||.+.|+|+++|||++||+|+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl-~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~ 346 (658)
T 4bby_A 278 VEAGITGQELERQLKESGY-CTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIE 346 (658)
T ss_dssp EETTCBHHHHHHHHHHHTE-ECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEE
T ss_pred EecCchHHHHHHHHHHcCC-ccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCccc
Confidence 9999999999999999964 33333456668899999999999999999999999999999999999873
No 12
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.95 E-value=8.1e-28 Score=221.14 Aligned_cols=172 Identities=15% Similarity=0.200 Sum_probs=133.2
Q ss_pred chhhHHHHhhhcCCCCCceEEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHh--c-CCcEEE
Q 027960 31 NHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKK--S-GLQIRV 107 (216)
Q Consensus 31 ~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~--~-~~~~~v 107 (216)
+.+++..||..... ...|.+ +...+... . ..|+......|.+|++|+|++||+++|++|++ + ++|+++
T Consensus 30 ~~~~~~~~l~~~~~--~~~v~~-~~~~~~~~----~--~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~ 100 (534)
T 1w1o_A 30 RGRPWPASLAALAL--DGKLRT-DSNATAAA----S--TDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAF 100 (534)
T ss_dssp ----------CTTT--TTCEEC-SHHHHHHT----S--CCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEE
T ss_pred chHHHHHHHHhcCC--CceEec-CHHHHHHH----h--ccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 45578888887332 344555 32233322 1 23665556789999999999999999999998 6 999999
Q ss_pred EcCCCCCCCCCccCCCCeEEEEccCCcee------EEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecCCC-Cccccc
Q 027960 108 RSGGHDLEGLSSISDVPFIIVDLINFSEI------SIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGT-CPGVGV 180 (216)
Q Consensus 108 ~ggGhs~~g~~~~~~~~gvvIdl~~~~~i------~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~-~~~vgv 180 (216)
+|+|||+.+.+... ++++|||++||+| ++|+++.+++||||++|.++++++.++| +..+... ...+++
T Consensus 101 ~G~G~~~~g~~~~~--~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G---l~~~~~~~~~~~tv 175 (534)
T 1w1o_A 101 RGRGHSLMGQAFAP--GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG---VAPRSWTDYLYLTV 175 (534)
T ss_dssp ESSCCCSSSTTCCT--TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT---EEESCCCSSCCSBH
T ss_pred ECCCCCCCCCcCCC--CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC---CcccCCCCCCCEEe
Confidence 99999998877655 4899999999985 8898889999999999999999999995 5544433 357899
Q ss_pred hhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 181 GGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 181 gG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
||+++++|+|..+.+||.++|+|+++|||++||+++
T Consensus 176 GG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~ 211 (534)
T 1w1o_A 176 GGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMV 211 (534)
T ss_dssp HHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEE
T ss_pred ceeccCCCccccccccccHhhhEEEEEEEeCCccEE
Confidence 999999999999999999999999999999999974
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.95 E-value=9.8e-28 Score=217.77 Aligned_cols=143 Identities=21% Similarity=0.325 Sum_probs=128.9
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCcee-EEeCCCCeEEec
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SIDAEAKTAWVQ 148 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~ 148 (216)
.|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.|.+.+.+ ++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 46554567899999999999999999999999999999999999988877643 5899999999999 899999999999
Q ss_pred CCCcHHHHHHHHHhhCCCceEecC--CCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 149 SGATVGQLNYRIAEKSQNLLAFPV--GTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 149 aGv~~~~l~~~l~~~g~~gl~~~~--g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
||++|.+|+++|.++| +.++. +.....++||+++++++|..+.+||.++|+|+++++|++||+++
T Consensus 122 aGv~~~~l~~~l~~~G---l~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~ 188 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVD---RLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVM 188 (476)
T ss_dssp TTCBHHHHHHHHHHTT---EECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEE
T ss_pred CCcCHHHHHHHHHHhC---CccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEE
Confidence 9999999999999995 56554 55557899999999999999999999999999999999999974
No 14
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.94 E-value=1.5e-27 Score=220.55 Aligned_cols=159 Identities=13% Similarity=0.201 Sum_probs=135.0
Q ss_pred CceEEcC-CCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCC---
Q 027960 47 SKVIYTQ-NNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD--- 122 (216)
Q Consensus 47 ~~~v~~p-~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~--- 122 (216)
+..++.| +++.|+.... .|+......|.+|++|++++||+++|++|+++++|++++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~~------~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAYQ------NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEEE------CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHHh------hhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4456667 9999997532 48776677999999999999999999999999999999999999866443221
Q ss_pred CCeEEEEc-cCCceeEEeC--CCCeEEecCCCcHHHHHHHHHhhCCCceEecCCCC-ccccchhccccCCCCcc------
Q 027960 123 VPFIIVDL-INFSEISIDA--EAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTC-PGVGVGGHFSGGGYGAL------ 192 (216)
Q Consensus 123 ~~gvvIdl-~~~~~i~id~--~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~g~~-~~vgvgG~~~ggg~G~~------ 192 (216)
.++++||| ++|++|++|+ ++.+|+||||+++.+|+++|.++| +.++.... +.++|||.+++|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G---l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~ 159 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD---LGWANLPAPGVLSIGGALAVNAHGAALPAVGQ 159 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT---EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC---CcccccCCCCCcccCCCcccCCcccccccCCc
Confidence 24899999 8999999998 788999999999999999999995 45554222 56899999999888875
Q ss_pred ----ccccchHhhheeeEEEECCCCe
Q 027960 193 ----LRKYGVAADHIVDAHMIDAKGE 214 (216)
Q Consensus 193 ----s~~~G~~~D~v~~~~vV~~dG~ 214 (216)
+.+||.++|+|+++|+|++||+
T Consensus 160 ~~~s~~~~G~~~d~V~~~evV~~dG~ 185 (561)
T 2i0k_A 160 TTLPGHTYGSLSNLVTELTAVVWNGT 185 (561)
T ss_dssp CCCTTCCSSCGGGGEEEEEEEEECSS
T ss_pred ccccccccccHhheEEEEEEEeCCCC
Confidence 7789999999999999999998
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.94 E-value=2.6e-26 Score=212.88 Aligned_cols=139 Identities=18% Similarity=0.260 Sum_probs=124.4
Q ss_pred CCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCC--CCeEEEEccCCcee-EEeCCCCeEEecCCC
Q 027960 75 TNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD--VPFIIVDLINFSEI-SIDAEAKTAWVQSGA 151 (216)
Q Consensus 75 ~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~--~~gvvIdl~~~~~i-~id~~~~~v~v~aGv 151 (216)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++++|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987766531 25799999999999 999999999999999
Q ss_pred cHHHHHHHHHhhCCCceEecCCC--CccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 152 TVGQLNYRIAEKSQNLLAFPVGT--CPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 152 ~~~~l~~~l~~~g~~gl~~~~g~--~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
+|.+|+++|.++| +.++... ....++||++++|++|..+.+||.++|+|+++|+|++||+++
T Consensus 214 ~~~~l~~~l~~~G---l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~ 277 (584)
T 2uuu_A 214 MGPELEKQLHKQG---VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLE 277 (584)
T ss_dssp BHHHHHHHHHHTT---EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEC
T ss_pred cHHHHHHHHHHcC---CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEE
Confidence 9999999999995 5665543 345899999999999999999999999999999999999974
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.94 E-value=3.8e-26 Score=207.54 Aligned_cols=140 Identities=23% Similarity=0.248 Sum_probs=125.5
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHhc--CCcEEEEcCCCCCCCCCccCCCCeEEEEccCCcee-EEeCCCCeEE
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKKS--GLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SIDAEAKTAW 146 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~--~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i-~id~~~~~v~ 146 (216)
.|.. ....|.+|++|+|++||+++|++|+++ ++|++++|+|||+.+.+... ++++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4754 477999999999999999999999999 79999999999997765533 4899999999999 9999999999
Q ss_pred ecCCCcHHHHHHHHHhhCCCceEecC--CCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 147 VQSGATVGQLNYRIAEKSQNLLAFPV--GTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 147 v~aGv~~~~l~~~l~~~g~~gl~~~~--g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
||||+++.+|+++|.++| +.++. |. +.+++||.+++|++|..+..||.++|+|+++++|++||+++
T Consensus 112 v~aGv~l~~L~~~l~~~G---l~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~ 179 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFG---LWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIR 179 (481)
T ss_dssp EETTCBHHHHHHHHGGGT---EECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEE
T ss_pred EcCCccHHHHHHHHHHcC---CEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEE
Confidence 999999999999999995 55543 43 46799999999999999999999999999999999999974
No 17
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.94 E-value=1.9e-26 Score=210.94 Aligned_cols=155 Identities=16% Similarity=0.266 Sum_probs=129.4
Q ss_pred EcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccC---CCCeEE
Q 027960 51 YTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSIS---DVPFII 127 (216)
Q Consensus 51 ~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~---~~~gvv 127 (216)
|+.+.+.|++.. . .|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+..... ..++++
T Consensus 8 fp~~i~~y~~~~----~--nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVv 81 (540)
T 3js8_A 8 FPAEIPLYKQSF----K--NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVL 81 (540)
T ss_dssp CCTTSCCEEEEE----E--CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEE
T ss_pred CCcccchhccee----e--ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEE
Confidence 444666777643 2 4888878899999999999999999999999999999999999985222111 125899
Q ss_pred EEcc-CCceeEEeCC--CCeEEecCCCcHHHHHHHHHhhCCCceEecC-CCCccccchhccccCCCCcc----------c
Q 027960 128 VDLI-NFSEISIDAE--AKTAWVQSGATVGQLNYRIAEKSQNLLAFPV-GTCPGVGVGGHFSGGGYGAL----------L 193 (216)
Q Consensus 128 Idl~-~~~~i~id~~--~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~-g~~~~vgvgG~~~ggg~G~~----------s 193 (216)
|||+ +||+|++|++ ..+|+||||+++.+|+++|.++| +.++. +..+.++|||++++|++|.. +
T Consensus 82 Idls~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G---L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g 158 (540)
T 3js8_A 82 LDTTRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG---LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAG 158 (540)
T ss_dssp EETTTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT---EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTT
T ss_pred EECcCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC---CEEEecCCCCCeEEcccccCCCCcccccccccccccc
Confidence 9995 7999999985 57999999999999999999995 56663 22366899999999999975 5
Q ss_pred cccchHhhheeeEEEECCCCe
Q 027960 194 RKYGVAADHIVDAHMIDAKGE 214 (216)
Q Consensus 194 ~~~G~~~D~v~~~~vV~~dG~ 214 (216)
.+||.++|+|+++++|++||+
T Consensus 159 ~~~G~~~D~V~~levV~adG~ 179 (540)
T 3js8_A 159 ASYGSISNLVLSLTAVVYDKA 179 (540)
T ss_dssp CCSSCGGGGEEEEEEEEEETT
T ss_pred cccccHHHhEEEEEEEcCCCC
Confidence 899999999999999999997
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.93 E-value=1.6e-25 Score=205.25 Aligned_cols=136 Identities=24% Similarity=0.311 Sum_probs=119.1
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCCccCCCCeEEEEccCCcee-EEeCCCCeEEecCCCcH
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLE-GLSSISDVPFIIVDLINFSEI-SIDAEAKTAWVQSGATV 153 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~-g~~~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~aGv~~ 153 (216)
...|.+|++|+|++||+++|++|+++++|++++|+|||+. |.+.+...++++|||++||+| ++|+++.+++||||++|
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4579999999999999999999999999999999999986 554431125899999999999 99999999999999999
Q ss_pred HHHHHHHHhhCCCceEecCC---CCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 154 GQLNYRIAEKSQNLLAFPVG---TCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 154 ~~l~~~l~~~g~~gl~~~~g---~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
.+|+++|.++|+ .++.+ .....|+||+++++|.|.. +||...|+|+++|+|++||+++
T Consensus 134 ~~l~~~l~~~Gl---~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~ 194 (520)
T 1wvf_A 134 GQMYDYIQENNL---PVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVY 194 (520)
T ss_dssp HHHHHHHHHTTC---SEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCC---cccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEE
Confidence 999999999965 45444 2236889999999998875 9999999999999999999974
No 19
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.93 E-value=9e-26 Score=207.12 Aligned_cols=142 Identities=23% Similarity=0.366 Sum_probs=121.4
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeC-----CC-
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKK-SGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDA-----EA- 142 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~-~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~-----~~- 142 (216)
.|+......|.+|++|+|++||+++|++|++ +++|+++||+|||+.|.+... ++++|||++||+|++|+ ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~--~gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE--GGLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT--TSEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC--CEEEEECcCCCCcEEeecccCCCCC
Confidence 3655556789999999999999999999996 999999999999998877654 38999999999997776 55
Q ss_pred -CeEEecCCCcHHHHHHH-HHhhCCCceEecC-CCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 143 -KTAWVQSGATVGQLNYR-IAEKSQNLLAFPV-GTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 143 -~~v~v~aGv~~~~l~~~-l~~~g~~gl~~~~-g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
.+++||||++|.+++++ ++++| +..+. +..+..+|||+++++|.|..+.+||.++|+|+++++|++||+++
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G---l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~ 204 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG---LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVV 204 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS---EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEE
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC---CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEE
Confidence 79999999999998655 54885 45222 22356899999999999999999999999999999999999974
No 20
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.93 E-value=1.2e-25 Score=201.30 Aligned_cols=138 Identities=19% Similarity=0.350 Sum_probs=123.7
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCcee-EEeCCCCeEEec
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SIDAEAKTAWVQ 148 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~ 148 (216)
.|+......|.+|++|+|++||+++|++| +|++++|+|||+.+.+... .++++|||++|++| ++|+++.+++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 48777778999999999999999999998 8999999999998877632 35899999999998 999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCceEecC-CCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 149 SGATVGQLNYRIAEKSQNLLAFPV-GTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 149 aGv~~~~l~~~l~~~g~~gl~~~~-g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
||+++.+|.++|.++| +.++. +..+.+||||.+++|++|.. .+||.++|+|+++++|++||+++
T Consensus 87 aG~~l~~l~~~l~~~G---l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~ 151 (422)
T 2vfr_A 87 GGVRYAELARVVHARG---LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTV 151 (422)
T ss_dssp TTCBHHHHHHHHHHTT---EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEE
T ss_pred CCCCHHHHHHHHHHcC---CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEE
Confidence 9999999999999995 45553 66678899999999999975 79999999999999999999974
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.92 E-value=7.3e-25 Score=202.51 Aligned_cols=138 Identities=20% Similarity=0.213 Sum_probs=119.1
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCCccCCCCeEEEEc-cCCcee-EEeCCCCeEEecCCCc
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLE-GLSSISDVPFIIVDL-INFSEI-SIDAEAKTAWVQSGAT 152 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~-g~~~~~~~~gvvIdl-~~~~~i-~id~~~~~v~v~aGv~ 152 (216)
...|.+|++|+|++||+++|++|+++++|++++|+||++. |...+...++++||| ++||+| ++|+++.+++||||++
T Consensus 68 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~ 147 (560)
T 1e8g_A 68 YFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVT 147 (560)
T ss_dssp SSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCB
T ss_pred ccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCC
Confidence 4589999999999999999999999999999999999986 554431124899999 999999 9999999999999999
Q ss_pred HHHHHHHHHhhCCCc--eEecCCCCccccchhccccCCCCccccccchHhhheeeEEEECCCCeeC
Q 027960 153 VGQLNYRIAEKSQNL--LAFPVGTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 153 ~~~l~~~l~~~g~~g--l~~~~g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG~iv 216 (216)
+.+|+++|.++|+ . +.+.++..+..|+||+++++|.|.. +||..+|+|+++++|++||+++
T Consensus 148 ~~~l~~~l~~~Gl-~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~ 210 (560)
T 1e8g_A 148 YHDLHNYLEANNL-RDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELL 210 (560)
T ss_dssp HHHHHHHHHHTTC-TTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEE
T ss_pred HHHHHHHHHHcCC-ccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEE
Confidence 9999999999976 3 3333344446789999998888864 9999999999999999999974
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.91 E-value=2.4e-25 Score=205.68 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=121.2
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCC----CeEEEEccCCcee-EEeCCCCeEEecCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDV----PFIIVDLINFSEI-SIDAEAKTAWVQSG 150 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~----~gvvIdl~~~~~i-~id~~~~~v~v~aG 150 (216)
...|.+|++|+|++||+++|++|+++++|++++||||++.|.+.+.++ ++++|||++||+| ++|+ +++++||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 458999999999999999999999999999999999999887766531 3899999999999 8994 578999999
Q ss_pred CcHHHHHHHHHhhCCCceEecCC---CCccccchhccccCCCCccccccchHhh----------------heeeEEEECC
Q 027960 151 ATVGQLNYRIAEKSQNLLAFPVG---TCPGVGVGGHFSGGGYGALLRKYGVAAD----------------HIVDAHMIDA 211 (216)
Q Consensus 151 v~~~~l~~~l~~~g~~gl~~~~g---~~~~vgvgG~~~ggg~G~~s~~~G~~~D----------------~v~~~~vV~~ 211 (216)
+++.+|+++|.++| +.+|.. .+...++||.++++++|..+.+||...| +|+++++|++
T Consensus 122 v~l~~L~~~l~~~G---l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 122 TTLYSLEKALKPLG---REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp CBHHHHHHHHGGGT---EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred cCHHHHHHHHHhcC---ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 99999999999994 566442 2335689999999999999999999999 9999999999
Q ss_pred CCeeC
Q 027960 212 KGEKF 216 (216)
Q Consensus 212 dG~iv 216 (216)
||+++
T Consensus 199 dG~i~ 203 (571)
T 1f0x_A 199 PEQIL 203 (571)
T ss_dssp HHHHH
T ss_pred CCcEE
Confidence 99863
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.90 E-value=1.3e-23 Score=182.24 Aligned_cols=130 Identities=20% Similarity=0.265 Sum_probs=111.8
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHH
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~ 155 (216)
...|.+|++|+|++||++++++|+++++|++++|+|||+.+..... ++++|||++|++|++| +.+++||||++|.+
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~--~gvvI~l~~m~~i~id--~~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI--RGIVISLLSLDHIEVS--DDAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE--EEEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC--CeEEEEeCCCCceEEc--CCEEEEeCCCcHHH
Confidence 4579999999999999999999999999999999999976544433 3899999999999887 36999999999999
Q ss_pred HHHHHHhhCCCceEecCCCCccccchhccccCCCCccccccc-hHhhheeeEEEECCCCeeC
Q 027960 156 LNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYG-VAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 156 l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G-~~~D~v~~~~vV~~dG~iv 216 (216)
|++++.++|+.++.+.++.++ ++||.+++++.| || .++|+|+++++|++||+++
T Consensus 122 l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~ 176 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLI 176 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEE
T ss_pred HHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEE
Confidence 999999997655556666654 688888877655 78 9999999999999999863
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.89 E-value=2.8e-23 Score=179.80 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=109.5
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHH
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~ 155 (216)
...|.++++|+|++||++++++|+++++|+.++|+|||+....... ++++|||++|++|++| +.+++|+||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~--~gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGI--RGVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCE--EEEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCC--CeEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 4589999999999999999999999999999999999976443222 4899999999999876 45999999999999
Q ss_pred HHHHHHhhCCCceEecCCCCccccchhccccCCCCcccccc-chHhhheeeEEEECCCCeeC
Q 027960 156 LNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKY-GVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 156 l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~-G~~~D~v~~~~vV~~dG~iv 216 (216)
|++++.++|+.|+.+..+.++++ ||.+.+++.| | |.++|+|+++++|++||+++
T Consensus 128 l~~~l~~~Gl~Gle~~~giPgTV--GGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~ 182 (322)
T 3tx1_A 128 TAKFALNESLSGLEFACGIPGSI--GGALHMNAGA-----YGGEISDVLEAATVLTQTGELK 182 (322)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBH--HHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEE
T ss_pred HHHHHHHcCCcccccCCCCcchh--HHHHHhCccC-----cccchHhhEEEEEEEcCCCCEE
Confidence 99999999876666888887654 5655544333 3 79999999999999999874
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.83 E-value=6.1e-21 Score=166.98 Aligned_cols=130 Identities=14% Similarity=0.024 Sum_probs=108.9
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeC--CCCeEEecCCCcH
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDA--EAKTAWVQSGATV 153 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~--~~~~v~v~aGv~~ 153 (216)
...|.++++|+|++||++++++|+++++|+.++|+|||...... . +|++|+++ |++|+++. ++.+++|+||++|
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~--~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-Y--TGMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-C--CeEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 35778999999999999999999999999999999999754443 3 38999998 99998754 4568999999999
Q ss_pred HHHHHHHHhhCCCceEecCCCCccccchhccccCCCCccccccch-HhhheeeEEEECC-CCeeC
Q 027960 154 GQLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYGV-AADHIVDAHMIDA-KGEKF 216 (216)
Q Consensus 154 ~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G~-~~D~v~~~~vV~~-dG~iv 216 (216)
.+|.+++.++|+.|+.+..+.++++ ||+..++.+.||. ++|+|+++++|++ ||+++
T Consensus 104 ~~l~~~a~~~Gl~GlE~l~gIPGtV-------GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~ 161 (357)
T 3i99_A 104 PSLVSWCVEQGIGGLENLALIPGCA-------GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVK 161 (357)
T ss_dssp HHHHHHHHHTTCTTCGGGTTCCSBG-------GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEE
T ss_pred HHHHHHHHHcCCcCccccCCCCchh-------HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEE
Confidence 9999999999987777777776543 3444555667886 9999999999998 89874
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.82 E-value=4.3e-20 Score=160.88 Aligned_cols=129 Identities=12% Similarity=0.038 Sum_probs=106.6
Q ss_pred CCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCcee-EEeCCC-CeEEecCCCcHH
Q 027960 77 QKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SIDAEA-KTAWVQSGATVG 154 (216)
Q Consensus 77 ~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i-~id~~~-~~v~v~aGv~~~ 154 (216)
..|.++++|+|++||++++++|+++++|+.++|+|||...... . +|++|+|+ |+++ .++.++ .+++|+||++|.
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~--~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-Y--RGTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-C--CeEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 4689999999999999999999999999999999999754432 2 38999996 9999 466666 689999999999
Q ss_pred HHHHHHHhhCCCceEecCCCCccccchhccccCCCCccccccc-hHhhheeeEEEECC-CCeeC
Q 027960 155 QLNYRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYG-VAADHIVDAHMIDA-KGEKF 216 (216)
Q Consensus 155 ~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G-~~~D~v~~~~vV~~-dG~iv 216 (216)
+|.+++.++|+.|+.+..+.++++ ||+..++.+.|| .++|+|.++++|++ ||+++
T Consensus 89 ~l~~~~~~~Gl~Gle~~~gIPGtV-------GGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~ 145 (340)
T 1uxy_A 89 RLVKYTLQEGMPGLENLALIPGCV-------GSSPIQNIGAYGVELQRVCAYVDSVELATGKQV 145 (340)
T ss_dssp HHHHHHHHTTCCSCGGGTTCCSBG-------GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEE
T ss_pred HHHHHHHHCCCCccccccCCccch-------hHHHHhccccchhhHHhheeEEEEEECCCCcEE
Confidence 999999999886677666666543 344444555677 59999999999996 99863
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.75 E-value=1e-18 Score=147.50 Aligned_cols=118 Identities=19% Similarity=0.136 Sum_probs=94.5
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLN 157 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~ 157 (216)
.|. +++|+|++||++++ ++|+.++|+|||..+.....+ ++++|++++|++|++| + +|+||++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHHH
Confidence 456 99999999999999 899999999999765443221 3899999999999865 2 999999999999
Q ss_pred HHHHhhCCCceEecCCCCccccchhccccCCCCccccccc-hHhhheeeEEEECCCCeeC
Q 027960 158 YRIAEKSQNLLAFPVGTCPGVGVGGHFSGGGYGALLRKYG-VAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 158 ~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~G~~s~~~G-~~~D~v~~~~vV~~dG~iv 216 (216)
+++.++|+.|+.+..+.++ ++||.+. ++.+.|| .++|+|+++++| +||+++
T Consensus 89 ~~~~~~Gl~Gle~~~giPG--tvGGav~-----~NaGayG~e~~d~v~~v~vv-~~G~v~ 140 (268)
T 2gqt_A 89 QEAARAGLSGLEGLLGIPA--QVGGAVK-----MNAGTRFGEMADALEAVEVF-HDGAFH 140 (268)
T ss_dssp HHHHHTTEESCGGGTTCCC--BHHHHHH-----TTCEETTEEGGGGEEEEEEE-ETTEEE
T ss_pred HHHHHcCCcCCccccCccc--hhHHHHH-----hccccCchhHHhheeEEEEE-CCCcEE
Confidence 9999997755556666654 3444443 3445688 799999999999 999874
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.33 E-value=1e-12 Score=107.75 Aligned_cols=73 Identities=22% Similarity=0.384 Sum_probs=64.0
Q ss_pred eEEeCCCCeEEecCCCcHHHHHHHHHhhCCCceEecC--CCCccccchhccccCCCCccccccchHhhheeeEEEECCCC
Q 027960 136 ISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPV--GTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKG 213 (216)
Q Consensus 136 i~id~~~~~v~v~aGv~~~~l~~~l~~~g~~gl~~~~--g~~~~vgvgG~~~ggg~G~~s~~~G~~~D~v~~~~vV~~dG 213 (216)
+++|+++.+++|+||+++.+|+++|.++ |+.++. +.++. ++||++++|++| .+||.. |+|+++++|++||
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~---Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG 72 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGT---GLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKG 72 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTT---TEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTS
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHc---CCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCC
Confidence 4789999999999999999999999998 466665 33344 999999999988 899999 9999999999999
Q ss_pred eeC
Q 027960 214 EKF 216 (216)
Q Consensus 214 ~iv 216 (216)
+++
T Consensus 73 ~i~ 75 (219)
T 2yvs_A 73 RRV 75 (219)
T ss_dssp CEE
T ss_pred CEE
Confidence 874
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.27 E-value=7.2e-07 Score=75.60 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=80.0
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-CccCCCCeEEEEccC---CceeEEeCCCCeEEecCCCcH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLIN---FSEISIDAEAKTAWVQSGATV 153 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~-~~~~~~~gvvIdl~~---~~~i~id~~~~~v~v~aGv~~ 153 (216)
.|.-+++|+|.+|+.++++.. +.+..+.|||++.... .......+++||+++ |+.|+.+ +..++++||+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 455689999999999998763 3579999999994221 000011479999984 6777664 457999999999
Q ss_pred HHHHHH-HHhhCCCceEe----cCCCC--ccccchhccccCCCCccccccchHhhhee----eEEEECCCCe
Q 027960 154 GQLNYR-IAEKSQNLLAF----PVGTC--PGVGVGGHFSGGGYGALLRKYGVAADHIV----DAHMIDAKGE 214 (216)
Q Consensus 154 ~~l~~~-l~~~g~~gl~~----~~g~~--~~vgvgG~~~ggg~G~~s~~~G~~~D~v~----~~~vV~~dG~ 214 (216)
.++.+. +.+.++.++.. ..+.. ..-|+||.+.++.. .+.....++ .+++..++|+
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~ 144 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGR 144 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCce
Confidence 999962 33333312221 12221 13578999988743 133333333 5777777763
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.79 E-value=2.1e-05 Score=66.58 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=67.6
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-CccCCCCeEEEEccC---CceeEEeCCCCeEEecCCCcH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLIN---FSEISIDAEAKTAWVQSGATV 153 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~-~~~~~~~gvvIdl~~---~~~i~id~~~~~v~v~aGv~~ 153 (216)
.|.-+++|+|.+|+.++++.. +-+..+.+|||+.... ........++||+++ |+.|+. +++.++++|++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 445689999999999988643 3458899999994211 111012479999986 456655 4557999999999
Q ss_pred HHHHH--HHHhhCCCceEec---CCCC---ccccchhccccCC
Q 027960 154 GQLNY--RIAEKSQNLLAFP---VGTC---PGVGVGGHFSGGG 188 (216)
Q Consensus 154 ~~l~~--~l~~~g~~gl~~~---~g~~---~~vgvgG~~~ggg 188 (216)
.++.+ .+.++ +..+.-. .+.. ...|+||.++.+.
T Consensus 79 ~~l~~~~~~~~~-~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~ 120 (288)
T 1n62_C 79 HALIGSDFLAAK-LPIIRETSLLIADPQIRYMGTIGGNAANGD 120 (288)
T ss_dssp HHHHHCHHHHHH-CHHHHHHHTTSSCHHHHHHCBHHHHHHSCC
T ss_pred HHHhcChHHHHH-HHHHHHHHHHhCCHHHHccccccchhccCC
Confidence 99984 45443 1012210 1111 1357999998773
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.58 E-value=4.1e-05 Score=68.91 Aligned_cols=120 Identities=12% Similarity=0.095 Sum_probs=81.1
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC--CccCCCCeEEEEccC---CceeEEeCCCCeEEecCCCcHHH
Q 027960 81 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL--SSISDVPFIIVDLIN---FSEISIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~--~~~~~~~gvvIdl~~---~~~i~id~~~~~v~v~aGv~~~~ 155 (216)
.+++|+|.+|+.++++.. . +..+.+||++.... .... ...++||+++ |+.|+.+ +..++++|++++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 467899999999988653 2 57899999996432 1111 2468999987 6777665 45699999999999
Q ss_pred HHHHHHhhCCCce----EecCCCC--ccccchhccccCCCCccccccchHhhhee----eEEEECCCCe
Q 027960 156 LNYRIAEKSQNLL----AFPVGTC--PGVGVGGHFSGGGYGALLRKYGVAADHIV----DAHMIDAKGE 214 (216)
Q Consensus 156 l~~~l~~~g~~gl----~~~~g~~--~~vgvgG~~~ggg~G~~s~~~G~~~D~v~----~~~vV~~dG~ 214 (216)
+.+.+.+ .+.++ ....+.. ...|+||.+.++.+. +....-++ .+++..++|+
T Consensus 252 l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~ 313 (462)
T 2w3s_A 252 LRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER 313 (462)
T ss_dssp HHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC
T ss_pred HHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce
Confidence 9987433 22111 1111111 236799999987744 56666666 7778877774
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=97.19 E-value=0.00049 Score=58.11 Aligned_cols=103 Identities=22% Similarity=0.156 Sum_probs=64.9
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC-ccCCCCeEEEEccCC---ceeEEeCCCCeEEecCCCcH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS-SISDVPFIIVDLINF---SEISIDAEAKTAWVQSGATV 153 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~-~~~~~~gvvIdl~~~---~~i~id~~~~~v~v~aGv~~ 153 (216)
.|.-+++|+|.+|+.++++. +-...+.+||++....- ........+||++++ +.|+. +++.++++|++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVTH 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCBH
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCcH
Confidence 45568999999999998863 23467899999942110 000113689999975 55554 4568999999999
Q ss_pred HHHHH--HHHhhCCCceEec---CCCC---ccccchhccccC
Q 027960 154 GQLNY--RIAEKSQNLLAFP---VGTC---PGVGVGGHFSGG 187 (216)
Q Consensus 154 ~~l~~--~l~~~g~~gl~~~---~g~~---~~vgvgG~~~gg 187 (216)
.++.+ .+.++-. .+.-. .+.. ...|+||.++.+
T Consensus 78 ~~l~~~~~~~~~~p-~L~~a~~~ias~qiRN~aTiGGNi~~a 118 (288)
T 1t3q_C 78 FRNKTDPTVAKCVP-ILPKVLAHVAHQAVRNRGTLGGSLAHA 118 (288)
T ss_dssp HHHHHCHHHHHHCT-HHHHHHTTSSCHHHHTTCBHHHHHHHT
T ss_pred HHHhcCHHHHHHHH-HHHHHHHHhCCHHHHcceechhhcccC
Confidence 99986 4443311 11100 1111 235789988765
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.27 E-value=0.0058 Score=51.88 Aligned_cols=80 Identities=6% Similarity=0.041 Sum_probs=55.2
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC-ccCCCCeEEEEccCCcee-EEeCCCCeEEecCCCcHHH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS-SISDVPFIIVDLINFSEI-SIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~-~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~aGv~~~~ 155 (216)
.+..+++|+|.+|+.++++. +. ...+.+||++....- ........+||++++... .|..++..++++|++++.+
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 84 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 84 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcHHH
Confidence 45678999999999887744 22 368899999953110 000013689999975433 3333456899999999999
Q ss_pred HHHHHH
Q 027960 156 LNYRIA 161 (216)
Q Consensus 156 l~~~l~ 161 (216)
+.+.+.
T Consensus 85 l~~~~~ 90 (305)
T 3nvz_B 85 VEKTLL 90 (305)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.98 E-value=0.011 Score=50.05 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=52.8
Q ss_pred ccEEEEeCCHHHHHHHHHHHHhcCC-cEEEEcCCCCCCCC-CccCCCCeEEEEccCCcee-EEeCCCCeEEecCCCcHHH
Q 027960 79 PLFIITPFHVSEIQAAIKCSKKSGL-QIRVRSGGHDLEGL-SSISDVPFIIVDLINFSEI-SIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 79 P~~vv~P~~~~dv~~~v~~a~~~~~-~~~v~ggGhs~~g~-~~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~aGv~~~~ 155 (216)
|.-+++|+|.+|+.++++. ++- ...+.+||++.... -........+||++++... .|..++..++++|++++.+
T Consensus 3 ~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQ 79 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHH
T ss_pred ceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHH
Confidence 4568899999998877643 333 46788999995211 0001123689999976544 3444567899999999999
Q ss_pred HHH
Q 027960 156 LNY 158 (216)
Q Consensus 156 l~~ 158 (216)
+.+
T Consensus 80 l~~ 82 (296)
T 3hrd_C 80 IEN 82 (296)
T ss_dssp HHH
T ss_pred HHh
Confidence 974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=94.31 E-value=0.1 Score=44.55 Aligned_cols=76 Identities=20% Similarity=0.163 Sum_probs=52.6
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-CccCCCCeEEEEccCC---ceeEEeCCCCeEEecCCCcH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLINF---SEISIDAEAKTAWVQSGATV 153 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~-~~~~~~~gvvIdl~~~---~~i~id~~~~~v~v~aGv~~ 153 (216)
.|--+++|+|.+|+.++++. -.-.+.+||++.... -........+||++++ +.|+.++ ++.++++|++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 44568999999999888762 247889999985211 0000123699999876 5555533 346999999999
Q ss_pred HHHHHH
Q 027960 154 GQLNYR 159 (216)
Q Consensus 154 ~~l~~~ 159 (216)
.++.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998763
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=89.97 E-value=0.33 Score=48.88 Aligned_cols=80 Identities=6% Similarity=0.038 Sum_probs=54.1
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC-ccCCCCeEEEEccCCcee-EEeCCCCeEEecCCCcHHH
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS-SISDVPFIIVDLINFSEI-SIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~-~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~aGv~~~~ 155 (216)
.+.-+++|.|.+|+.++++.. -.-.+.+||++....- ........+||++++... .|..++..++++|++++.+
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~ 307 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 307 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHH
Confidence 345689999999998876542 1347889999842110 000113589999975543 3333456799999999999
Q ss_pred HHHHHH
Q 027960 156 LNYRIA 161 (216)
Q Consensus 156 l~~~l~ 161 (216)
+.+.+.
T Consensus 308 l~~~l~ 313 (1332)
T 3unc_A 308 VEKTLL 313 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=75.70 E-value=3.9 Score=41.26 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=51.1
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-CccCCCCeEEEEccCCcee-EEeCCCCeEEecCCCcHHHHHH
Q 027960 81 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLINFSEI-SIDAEAKTAWVQSGATVGQLNY 158 (216)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~-~~~~~~~gvvIdl~~~~~i-~id~~~~~v~v~aGv~~~~l~~ 158 (216)
..++|.|.+|+.++.+.-. + ..+..|++...-. -.....-.++|++.+.... .+..++..++++|++++.++.+
T Consensus 242 ~w~~P~tl~el~~l~~~~p--~--a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~ 317 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP--S--APLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKN 317 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT--T--SCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHH
T ss_pred eEecCCCHHHHHHHHHHCC--C--CeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHHH
Confidence 4789999999988654321 2 2355677763210 0001012589998876655 4555667899999999999998
Q ss_pred HHHh
Q 027960 159 RIAE 162 (216)
Q Consensus 159 ~l~~ 162 (216)
.|.+
T Consensus 318 ~l~~ 321 (1335)
T 3zyv_A 318 VLSD 321 (1335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 38
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=73.55 E-value=4.1 Score=29.37 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 112 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGh 112 (216)
...|..|++..+++|+.++.+.|.+.++|. .++=.|+
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 458999999999999999999999999996 4555555
No 39
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=63.22 E-value=15 Score=26.43 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=31.6
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 112 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGh 112 (216)
...|..|++..+++|+.++.+.|.+.++|. .++-.|+
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 458999999999999999999999999996 4555555
No 40
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=61.82 E-value=13 Score=26.85 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=32.0
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 113 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGhs 113 (216)
...+..|++..+++|+.++.+.|++.++|. .++-.|+.
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 347899999999999999999999999996 45566654
No 41
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=61.54 E-value=15 Score=26.24 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=31.4
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 112 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGh 112 (216)
...|..|++..+++|+.++.+.|.+.++|. .++-.|+
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 458999999999999999999999999996 4555554
No 42
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=60.70 E-value=14 Score=26.24 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=30.2
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 112 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGh 112 (216)
...|..|++..+++|+.++.+.|.+.++|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 458999999999999999999999999986 3444443
No 43
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=52.85 E-value=17 Score=24.65 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=27.3
Q ss_pred cEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCce
Q 027960 80 LFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSE 135 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~ 135 (216)
-.+++|++-+|++++....++. ..|+|+|++|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~----------------------~~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDG----------------------DAVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTT----------------------CCEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCC----------------------CEEEEECCCCCH
Confidence 5789999999999999888762 257888887764
No 44
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=50.27 E-value=28 Score=24.75 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=30.3
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 112 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~-~v~ggGh 112 (216)
...|..+++..+++|+.++.+.|.+.++|. .++=.|+
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 346899999999999999999999999985 4444444
No 45
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=47.08 E-value=41 Score=25.11 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=32.7
Q ss_pred cEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+.+..+.+-.||.+......
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4567899999999999998876678999999998754433
No 46
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=46.89 E-value=18 Score=30.55 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.1
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
.|. .|+.|.|.+|...+++.|.+.+.|+.+|-.
T Consensus 151 iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 151 CPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp STTCEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 454 689999999999999999999999999864
No 47
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=42.80 E-value=23 Score=29.70 Aligned_cols=30 Identities=7% Similarity=-0.066 Sum_probs=27.1
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEE
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRV 107 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v 107 (216)
.|. .|+.|.|.+|...+++.|.+.+.|+.+
T Consensus 141 iP~l~V~~Psd~~e~~~~l~~A~~~~~Pv~i 171 (338)
T 1qs0_B 141 VCGLRTVMPSNPYDAKGLLIASIECDDPVIF 171 (338)
T ss_dssp STTCEEECCCSHHHHHHHHHHHHHSSSCEEE
T ss_pred CCCCEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 454 689999999999999999999999999
No 48
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=42.75 E-value=17 Score=31.11 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs 113 (216)
=|.+|++++|++|+++++.|.+- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 58899999999999999998764 44675
No 49
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=42.32 E-value=27 Score=29.07 Aligned_cols=31 Identities=3% Similarity=-0.037 Sum_probs=27.9
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEE
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVR 108 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~ 108 (216)
.|. .|+.|.|.+|...+++.|-+.+.|+.++
T Consensus 140 iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~i~ 171 (324)
T 1umd_B 140 TAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFL 171 (324)
T ss_dssp STTCEEEECCSHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEE
Confidence 454 7999999999999999999999999985
No 50
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=42.04 E-value=55 Score=24.56 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=32.1
Q ss_pred cEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCCCCCC
Q 027960 80 LFIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHDLEGLS 118 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs~~g~~ 118 (216)
...+.|.+.+++++.++.+.+. +..+.+-.||.+.....
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D 85 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCC
Confidence 4567899999999999998875 67899999999875433
No 51
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=41.59 E-value=26 Score=29.15 Aligned_cols=31 Identities=6% Similarity=0.091 Sum_probs=28.2
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEE
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVR 108 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~ 108 (216)
.|. .|+.|.|.+|...++++|.+.+.|+.++
T Consensus 139 iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~ 170 (324)
T 1w85_B 139 QPGLKVVIPSTPYDAKGLLISAIRDNDPVIFL 170 (324)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCCEEEeeCCHHHHHHHHHHHHHcCCCEEEE
Confidence 564 8999999999999999999999999995
No 52
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=40.94 E-value=58 Score=25.00 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=31.7
Q ss_pred cEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC
Q 027960 80 LFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS 118 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~ 118 (216)
...+.|.+.+++++.++.+.+.+..+.+-.||.+....+
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D 105 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRD 105 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcc
Confidence 456779999999999998865678899999999975443
No 53
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=39.93 E-value=58 Score=24.66 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=31.1
Q ss_pred cEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCCCCC
Q 027960 80 LFIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHDLEGL 117 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs~~g~ 117 (216)
...+.|.+.+++++.++.+.+. +..+.+-.||.+....
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~ 96 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPT 96 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTT
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 3557899999999999888765 5889999999987543
No 54
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=39.85 E-value=64 Score=23.96 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=32.3
Q ss_pred cEEEEeCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKK-SGLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~-~~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+ .+..+.+-.||.+......
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~ 88 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDV 88 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCc
Confidence 356789999999999999875 4788999999998754433
No 55
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=39.50 E-value=65 Score=23.86 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=32.2
Q ss_pred cEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+. +..+.+-.||.+......
T Consensus 39 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~ 79 (164)
T 2is8_A 39 AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDR 79 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCC
Confidence 3567799999999999988775 678999999998754333
No 56
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=38.85 E-value=45 Score=22.35 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=28.5
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 027960 81 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 113 (216)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs 113 (216)
++-...+.+|+.++++..+.++.|+.+.-.|-+
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 566688999999999999999999988877665
No 57
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.73 E-value=80 Score=20.87 Aligned_cols=31 Identities=6% Similarity=0.191 Sum_probs=23.4
Q ss_pred eeEEeCCCCeEEecCCCcHHHHHHHHHhhCC
Q 027960 135 EISIDAEAKTAWVQSGATVGQLNYRIAEKSQ 165 (216)
Q Consensus 135 ~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~ 165 (216)
.+++|...+.++|..-+...++.+.+.+.|+
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy 78 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGR 78 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTS
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCC
Confidence 3456666777777666778899999998876
No 58
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=38.72 E-value=28 Score=29.70 Aligned_cols=31 Identities=10% Similarity=0.155 Sum_probs=27.4
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEE
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVR 108 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~ 108 (216)
.|. .|+.|.|.+|...++++|.+.+-|+.++
T Consensus 187 iPnl~V~~Psd~~e~~~ll~~A~~~~~Pv~i~ 218 (369)
T 1ik6_A 187 TPGLVVVMPSTPYNAKGLLKAAIRGDDPVVFL 218 (369)
T ss_dssp CTTCEEECCCSHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCcEEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 454 6889999999999999999988999985
No 59
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=38.50 E-value=54 Score=24.48 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=30.0
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC
Q 027960 81 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS 118 (216)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~ 118 (216)
..+.|.+ +++++.++.+.+.+..+.+-.||.+.....
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~~D 82 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAPTD 82 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence 4566999 999999988876678899999999975443
No 60
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=37.74 E-value=30 Score=29.13 Aligned_cols=31 Identities=6% Similarity=-0.066 Sum_probs=27.9
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEE
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVR 108 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~ 108 (216)
.|. .|+.|.|.+|...++++|.+.+.|+.++
T Consensus 157 iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~ 188 (342)
T 2bfd_B 157 CPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFF 188 (342)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCcEEEeeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 564 7999999999999999999999999994
No 61
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=34.98 E-value=25 Score=30.92 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs 113 (216)
=|.+|++++|++|+++++.|.|- .=||.
T Consensus 92 YT~~di~eIv~YA~~rgI~VIPEID~PGH~ 121 (442)
T 2yl5_A 92 LTQAEVTELIEYAKSKDIGLIPAINSPGHM 121 (442)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCeeeeecccchhH
Confidence 38899999999999999998864 45776
No 62
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=33.82 E-value=23 Score=30.97 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHhcCCcEEEE--cCCCC
Q 027960 87 HVSEIQAAIKCSKKSGLQIRVR--SGGHD 113 (216)
Q Consensus 87 ~~~dv~~~v~~a~~~~~~~~v~--ggGhs 113 (216)
|.+|++++|++|+++++.|.|- .=||.
T Consensus 90 T~~di~eIv~YA~~rgI~VIPEID~PGH~ 118 (434)
T 2yl6_A 90 TESQMTDLINYAKDKGIGLIPTVNSPGHM 118 (434)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccchH
Confidence 7899999999999999998864 45776
No 63
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=33.46 E-value=90 Score=23.45 Aligned_cols=40 Identities=13% Similarity=0.157 Sum_probs=32.6
Q ss_pred cEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+. +..+.+-.||.+......
T Consensus 45 ~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g~~D~ 85 (178)
T 2pbq_A 45 EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPAPRDV 85 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCc
Confidence 5568899999999999988764 678999999998765443
No 64
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=33.43 E-value=83 Score=23.38 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=31.2
Q ss_pred cEEEEeCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCC
Q 027960 80 LFIITPFHVSEIQAAIKCSKK-SGLQIRVRSGGHDLEGL 117 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~-~~~~~~v~ggGhs~~g~ 117 (216)
...+.|.+.+++++.++.+.+ .+..+.+-.||.+....
T Consensus 49 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~ 87 (169)
T 1y5e_A 49 SYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITKR 87 (169)
T ss_dssp EEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSSTT
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCC
Confidence 457789999999999998876 36789999999987543
No 65
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=33.32 E-value=87 Score=24.12 Aligned_cols=53 Identities=6% Similarity=-0.069 Sum_probs=37.7
Q ss_pred CCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC
Q 027960 53 QNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGH 112 (216)
Q Consensus 53 p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGh 112 (216)
...|.+++....+. ..+ - -.++.++.|++.+|+..++++..+.. |+...+-|.
T Consensus 101 ~~tp~~~~l~~~~~--~~~---g-DivKia~~a~~~~D~l~ll~~~~~~~-p~I~~~MG~ 153 (196)
T 2ox1_A 101 IRTPDYSELKGIVE--GRR---G-DLVKIATMGKSKRDVETIVRILTNYD-DVVAFLMGE 153 (196)
T ss_dssp SCCCCHHHHHHHHH--TCC---S-SEEEEEEECCSHHHHHHHHHHHHHCS-SEEEEEESG
T ss_pred CCCcCHHHHHHHHH--HHc---C-CEEEEEEcCCCHHHHHHHHHHHhhCC-CeEEEEcCC
Confidence 35677777655332 222 2 48889999999999999999988765 776666544
No 66
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=33.17 E-value=60 Score=26.34 Aligned_cols=52 Identities=12% Similarity=0.236 Sum_probs=40.1
Q ss_pred EEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 50 IYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 50 v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
-|.+++.+|...+.+- ....|.+|+.+...+|...+++.+++.++...+.++
T Consensus 177 ~~~~~~~d~~~~l~~i---------~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 228 (353)
T 4gnr_A 177 TFVAGDTDFQAALTKM---------KGKDFDAIVVPGYYNEAGKIVNQARGMGIDKPIVGG 228 (353)
T ss_dssp EECTTCCCCHHHHHHH---------HTSCCSEEECCSCHHHHHHHHHHHHHTTCCSCEEEC
T ss_pred eeCCCCCCHHHHHHHH---------HhcCCCEEEEecCcHHHHHHHHHHHHcCCCCcEEEe
Confidence 3667777888775531 134899999999999999999999999877666553
No 67
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=32.50 E-value=94 Score=23.71 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=31.9
Q ss_pred cEEEEeCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKK-SGLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~-~~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+ .+..+.+-.||.+......
T Consensus 55 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g~~D~ 95 (189)
T 1jlj_A 55 AYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDV 95 (189)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCCCccc
Confidence 356779999999999998875 3678999999998754433
No 68
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=32.08 E-value=1e+02 Score=23.77 Aligned_cols=40 Identities=10% Similarity=0.054 Sum_probs=32.7
Q ss_pred cEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCCCCCCc
Q 027960 80 LFIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHDLEGLSS 119 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs~~g~~~ 119 (216)
...+.|.+.+++++.++.+.+. +..+.+-.||.+......
T Consensus 43 ~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~ 83 (195)
T 1di6_A 43 ETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDV 83 (195)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 4678899999999999988774 688999999999765444
No 69
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=31.34 E-value=81 Score=20.91 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=24.7
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEE
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIR 106 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~ 106 (216)
+|+......|.++..=.+ +-..++++.|+++++|+.
T Consensus 9 ~Yd~~~~~aP~VvAKG~~-~~A~~I~~~A~e~~VPi~ 44 (83)
T 3bzy_B 9 YYKLGETPLPLVIETGKD-AKALQIIKLAELYDIPVI 44 (83)
T ss_dssp ECCTTTCSSCEEEEEEET-HHHHHHHHHHHHTTCCEE
T ss_pred EeCCCCCCCCEEEEEeCc-HHHHHHHHHHHHcCCCEE
Confidence 354444467777776655 344667899999999974
No 70
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=30.51 E-value=91 Score=25.29 Aligned_cols=51 Identities=16% Similarity=0.231 Sum_probs=38.5
Q ss_pred EcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 51 YTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 51 ~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
+.+++..|......-. ...|.+|+.+.+.++...+++.+++.++++.+.|.
T Consensus 186 ~~~~~~d~~~~~~~l~---------~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 186 FRSGDQDFSAQLSVAM---------SFNPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp ECTTCCCCHHHHHHHH---------HTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred eCCCCccHHHHHHHHH---------hcCCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 5566667776644211 23789999999999999999999999988777664
No 71
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=30.48 E-value=34 Score=30.65 Aligned_cols=29 Identities=17% Similarity=0.547 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHDL 114 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs~ 114 (216)
-|.+|+++++++|+++++.|.+- .=||..
T Consensus 212 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 242 (507)
T 2gjx_A 212 YTAQDVKEVIEYARLRGIRVLAEFDTPGHTL 242 (507)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSCT
T ss_pred cCHHHHHHHHHHHHHcCCEEEECCCCcchHH
Confidence 48899999999999999999875 458874
No 72
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=29.57 E-value=47 Score=26.08 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=29.9
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGH 112 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGh 112 (216)
.++.++.|++.+|+..++++.++...|+...+-|.
T Consensus 140 ivKia~~a~~~~D~l~ll~~~~~~~~P~I~~~MG~ 174 (219)
T 2egz_A 140 IPKIAVKANSYEDVARLLCISRQVEGEKILISMGD 174 (219)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTSCSCBEEEEESS
T ss_pred EEEEEEccCCHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 88899999999999999999888777777766554
No 73
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=29.54 E-value=36 Score=30.49 Aligned_cols=29 Identities=17% Similarity=0.503 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHDL 114 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs~ 114 (216)
-|.+|+++++++|+++++.|.+- .=||..
T Consensus 217 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 247 (507)
T 1now_A 217 YTPNDVRMVIEYARLRGIRVLPEFDTPGHTL 247 (507)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCchhHH
Confidence 38899999999999999999874 567864
No 74
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=29.48 E-value=90 Score=18.38 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=22.7
Q ss_pred eEEeCCCCeEEec--CCCcHHHHHHHHHhhCC
Q 027960 136 ISIDAEAKTAWVQ--SGATVGQLNYRIAEKSQ 165 (216)
Q Consensus 136 i~id~~~~~v~v~--aGv~~~~l~~~l~~~g~ 165 (216)
+++|...+.++|. ..+...++.+.+.+.|+
T Consensus 33 ~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy 64 (69)
T 4a4j_A 33 CQVNFALEQAVVSYHGETTPQILTDAVERAGY 64 (69)
T ss_dssp EEEETTTTEEEEEECTTCCHHHHHHHHHHTTC
T ss_pred EEEEecCCEEEEEECCCCCHHHHHHHHHHcCC
Confidence 4566666666666 67788999999998865
No 75
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=29.33 E-value=36 Score=30.80 Aligned_cols=28 Identities=7% Similarity=0.279 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEEc--CCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVRS--GGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~g--gGhs 113 (216)
=|.+|++++|++|+++++.|.+-= =||.
T Consensus 221 YT~~di~eIv~YA~~rgI~VIPEID~PGH~ 250 (543)
T 3rcn_A 221 YTQDDLREIVAFAADRHITVIPEIDVPGHS 250 (543)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEeeeeccchhH
Confidence 388999999999999999988752 3666
No 76
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=28.27 E-value=37 Score=30.63 Aligned_cols=28 Identities=7% Similarity=0.240 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEEc--CCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVRS--GGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~g--gGhs 113 (216)
-|.+|+++++++|+++++.|.+-= =||.
T Consensus 253 YT~~di~eIv~YA~~rgI~VIPEID~PGH~ 282 (525)
T 3gh5_A 253 YTQEQFKDIVSYAAERYIEVIPEIDMPGHT 282 (525)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEECCCSSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEecccchH
Confidence 388999999999999999988753 3666
No 77
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=27.99 E-value=40 Score=30.25 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs 113 (216)
-|.+|+++++++|+++++.|.+- .=||.
T Consensus 228 YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 257 (512)
T 1jak_A 228 YTKAEYKEIVRYAASRHLEVVPEIDMPGHT 257 (512)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCchH
Confidence 47899999999999999999874 34564
No 78
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=27.36 E-value=1.4e+02 Score=24.16 Aligned_cols=52 Identities=8% Similarity=0.071 Sum_probs=38.7
Q ss_pred EEcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 50 IYTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 50 v~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
.+.+++..|......-. ...|.+|+...+.++...+++.+++.++++.+.|.
T Consensus 177 ~~~~~~~d~~~~~~~l~---------~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~ 228 (364)
T 3lop_A 177 SYPRNTANVGPAVDKLL---------AADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGL 228 (364)
T ss_dssp EECTTSCCCHHHHHHHH---------HSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred EecCCCccHHHHHHHHH---------hCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEe
Confidence 45566677777654211 13789999999999999999999999887766653
No 79
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=27.06 E-value=93 Score=20.98 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=21.9
Q ss_pred eC-CHHHHHHHHHHHHhcCCcEEEEc
Q 027960 85 PF-HVSEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 85 P~-~~~dv~~~v~~a~~~~~~~~v~g 109 (216)
+. +.+++.+++++.+++++.+-+.|
T Consensus 71 ~G~~~~~~~~ai~~L~~~~v~vEvlg 96 (98)
T 3ced_A 71 PYISSVDFGKFEKELIERQVKMEVLR 96 (98)
T ss_dssp SCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 55 68899999999999999988875
No 80
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=26.73 E-value=1.2e+02 Score=22.94 Aligned_cols=38 Identities=18% Similarity=0.056 Sum_probs=30.1
Q ss_pred cEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCC
Q 027960 80 LFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS 118 (216)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~ 118 (216)
...+.|.+.+++.+.++.+.+. ..+.+-.||.+.....
T Consensus 41 ~~~iv~Dd~~~I~~~l~~a~~~-~DlVittGG~g~~~~D 78 (172)
T 3kbq_A 41 RGFVVMDDLDEIGWAFRVALEV-SDLVVSSGGLGPTFDD 78 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH-CSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhc-CCEEEEcCCCcCCccc
Confidence 4567799999999999888654 6789999999875433
No 81
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=26.51 E-value=55 Score=29.98 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=30.9
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 113 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggGhs 113 (216)
.|. .|+.|.|.+|+..+++.|-+.+.|+.+|-....
T Consensus 446 iP~l~v~~P~d~~e~~~~~~~a~~~~~Pv~i~~~r~~ 482 (629)
T 2o1x_A 446 IPGVRIGLPKDAAELRGMLKYAQTHDGPFAIRYPRGN 482 (629)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEEECCSSB
T ss_pred cCCcEEEecCCHHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 454 688999999999999999999999999876544
No 82
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=25.62 E-value=1.2e+02 Score=24.90 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=38.4
Q ss_pred EcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCC
Q 027960 51 YTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGG 111 (216)
Q Consensus 51 ~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~ggG 111 (216)
+.+++..|......- . ...|.+|+...+.++...+++.+++.++++.+.+..
T Consensus 180 ~~~~~~d~~~~~~~l-~--------~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 231 (392)
T 3lkb_A 180 VGSGNLDNTALLKRF-E--------QAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGAH 231 (392)
T ss_dssp CCTTCCCCHHHHHHH-H--------HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECG
T ss_pred eCCCCcCHHHHHHHH-H--------hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEec
Confidence 445566777665421 1 137899999999999999999999999887777653
No 83
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=25.54 E-value=37 Score=18.26 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=19.4
Q ss_pred eCCHHHHHHHHHHHHhcCCcEEE
Q 027960 85 PFHVSEIQAAIKCSKKSGLQIRV 107 (216)
Q Consensus 85 P~~~~dv~~~v~~a~~~~~~~~v 107 (216)
-.++||+..+-..|++.+++++.
T Consensus 11 ggtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 11 GGTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCCHHHHHHHHHHHHHHCCCCCB
T ss_pred cCCHHHHHHHHHHHHhccEEEEe
Confidence 46789999999999999988764
No 84
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=25.38 E-value=63 Score=26.38 Aligned_cols=79 Identities=11% Similarity=0.032 Sum_probs=43.7
Q ss_pred CccEEEEeC--CHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHH
Q 027960 78 KPLFIITPF--HVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQ 155 (216)
Q Consensus 78 ~P~~vv~P~--~~~dv~~~v~~a~~~~~~~~v~ggGhs~~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~ 155 (216)
.+..|+.+. +.+|..++++.|+++++++ . |.|..|...+.. ...-.+... + ..+.+--+.-+.|....+
T Consensus 89 i~~iVi~t~G~~~~~~~~l~~~A~~~gv~l--i--GPNc~Gi~~p~~--~~~~~~~~~--~-~~~G~i~~vsqSG~l~~~ 159 (288)
T 2nu8_A 89 IKLIITITEGIPTLDMLTVKVKLDEAGVRM--I--GPNTPGVITPGE--CKIGIQPGH--I-HKPGKVGIVSRSGTLTYE 159 (288)
T ss_dssp CSEEEECCCCCCHHHHHHHHHHHHHHTCEE--E--CSSCCEEEETTT--EEEESSCTT--S-CCEEEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHcCCEE--E--ecCCcceecCCc--ceeEecccC--C-CCCCCEEEEECcHHHHHH
Confidence 444555555 6777888888888888754 3 344433222221 222111110 0 001111255678888889
Q ss_pred HHHHHHhhCC
Q 027960 156 LNYRIAEKSQ 165 (216)
Q Consensus 156 l~~~l~~~g~ 165 (216)
+..++.+.|+
T Consensus 160 ~~~~~~~~g~ 169 (288)
T 2nu8_A 160 AVKQTTDYGF 169 (288)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999988876
No 85
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=25.37 E-value=47 Score=30.30 Aligned_cols=29 Identities=10% Similarity=0.257 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHDL 114 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs~ 114 (216)
-|.+|+++++++|+++++.|.+- .=||..
T Consensus 253 YT~~di~eiv~yA~~rgI~VIPEId~PGH~~ 283 (572)
T 3ozo_A 253 YTKAAIREVVRFGLERGVRVLPEFDAPAHVG 283 (572)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSCC
T ss_pred cCHHHHHHHHHHHHHhCCceeeeeccchHHH
Confidence 48899999999999999998764 457874
No 86
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=25.29 E-value=1.1e+02 Score=18.15 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=25.1
Q ss_pred eeEEeCCCCeEEecCCCcHHHHHHHHHhhCC
Q 027960 135 EISIDAEAKTAWVQSGATVGQLNYRIAEKSQ 165 (216)
Q Consensus 135 ~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~ 165 (216)
.+++|...+.++|..-+...++.+.+.+.|+
T Consensus 30 ~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy 60 (68)
T 3iwl_A 30 KYDIDLPNKKVCIESEHSMDTLLATLKKTGK 60 (68)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTCS
T ss_pred EEEEEcCCCEEEEEecCCHHHHHHHHHHcCC
Confidence 3466777788888877889999999998876
No 87
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=25.23 E-value=60 Score=29.92 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=28.8
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
.|- .|+.|.+.+|...++++|-+.+-|+.+|=.
T Consensus 465 iP~l~V~~P~d~~e~~~~l~~A~~~~~Pv~ir~~ 498 (632)
T 3l84_A 465 MPNFLTFRPADGVENVKAWQIALNADIPSAFVLS 498 (632)
T ss_dssp SSSCEEECCSSHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CCCCEEEecCCHHHHHHHHHHHHhCCCCEEEEEc
Confidence 443 699999999999999999999999998854
No 88
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=24.92 E-value=1.3e+02 Score=24.10 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=37.9
Q ss_pred EcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 51 YTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 51 ~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
+.+++..|......-. ...|.+|+...+.++...+++.+++.++++.+.+.
T Consensus 175 ~~~~~~d~~~~~~~l~---------~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 175 VNVGDKDFSALISKMK---------EAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp CCTTCCCCHHHHHHHH---------HTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred eCCCCCCHHHHHHHHH---------hcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEe
Confidence 4556677777654211 13688999899999999999999999888777664
No 89
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=24.85 E-value=81 Score=22.85 Aligned_cols=33 Identities=6% Similarity=0.162 Sum_probs=28.4
Q ss_pred CCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEc
Q 027960 76 NQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 76 ~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~g 109 (216)
...|..|+...+ +++.++.+.|.+.++++.+..
T Consensus 54 ~~~p~~VL~a~~-~~L~~l~~~a~~~~l~~~~f~ 86 (135)
T 2gax_A 54 SIQPIVVMATDQ-EALRKIHQRSLERDITTSLYI 86 (135)
T ss_dssp BSSCEEEEEECH-HHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCcEEEEEECH-HHHHHHHHHHHHCCCcEEecc
Confidence 568999999888 999999999999998876654
No 90
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.62 E-value=89 Score=21.25 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=23.2
Q ss_pred ccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEE
Q 027960 70 VFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIR 106 (216)
Q Consensus 70 ~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~ 106 (216)
+|+......|.++..=.+ +-..++++.|+++++|+.
T Consensus 9 ~Yd~~~~~AP~VvAKG~~-~~A~~I~e~A~e~gVPi~ 44 (93)
T 2vt1_B 9 YFNPEIAPAPFISLIETN-QCALAVRKYANEVGIPTV 44 (93)
T ss_dssp ECCTTTCSSCEEEEEEEH-HHHHHHHHHHHHTTCCEE
T ss_pred EeCCCCCCCCEEEEEeCc-HHHHHHHHHHHHcCCCEE
Confidence 354433456766655433 444667889999999974
No 91
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=24.19 E-value=1.1e+02 Score=18.41 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=23.7
Q ss_pred eeEEeCCCCeEEecCCCcHHHHHHHHHhhCC
Q 027960 135 EISIDAEAKTAWVQSGATVGQLNYRIAEKSQ 165 (216)
Q Consensus 135 ~i~id~~~~~v~v~aGv~~~~l~~~l~~~g~ 165 (216)
.+++|...+.++|...+...++.+.+.+.|+
T Consensus 35 ~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy 65 (73)
T 1cc8_A 35 KIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65 (73)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTSS
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCC
Confidence 3456777777777766788899999988875
No 92
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=24.12 E-value=25 Score=25.06 Aligned_cols=33 Identities=6% Similarity=0.061 Sum_probs=24.4
Q ss_pred CccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 78 KPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 78 ~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
.-.+|++|...++|.+++..+.=.+..+...||
T Consensus 8 lI~AIIrp~kld~V~~AL~~~G~~~t~v~~~gG 40 (114)
T 3m05_A 8 LVIAIVQDKDANYLSDQFIDQNVRATKLSTTGG 40 (114)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCCEEEEEEEET
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCEEEEEEecc
Confidence 346899999999999988877555555656554
No 93
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=23.89 E-value=1.3e+02 Score=24.13 Aligned_cols=51 Identities=12% Similarity=0.229 Sum_probs=37.2
Q ss_pred EcCCCCCchHHHhhcccccccCCCCCCCccEEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 51 YTQNNSSYSSVLKSSIQNLVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 51 ~~p~~~~y~~~~~~~~~n~~w~~~~~~~P~~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
+.+++..|......-. ...|.+|+...+.++...+++.+++.++++.+.|.
T Consensus 176 ~~~~~~~~~~~~~~l~---------~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 176 VPPGNRRFDDVIDEIE---------DEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp ECTTCCCCHHHHHHHH---------HHCCSEEEEESCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred cCCCCccHHHHHHHHH---------hcCCCEEEEccCchHHHHHHHHHHHcCCCCcEEec
Confidence 4455666766544211 12688999999999999999999999887766654
No 94
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=23.36 E-value=68 Score=29.26 Aligned_cols=36 Identities=19% Similarity=0.130 Sum_probs=30.6
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKS-GLQIRVRSGGHD 113 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~-~~~~~v~ggGhs 113 (216)
.|. .|+.|.|.+|...+++.|.+. +-|+.+|-....
T Consensus 443 iP~l~v~~P~d~~e~~~~l~~a~~~~~~Pv~i~~~r~~ 480 (621)
T 2o1s_A 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN 480 (621)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHCCSSCEEEECCSSB
T ss_pred CCCCEEEecCCHHHHHHHHHHHHHcCCCCEEEEeCCCC
Confidence 554 688999999999999999998 889999876544
No 95
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=23.03 E-value=55 Score=30.18 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEE--cCCCC
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVR--SGGHD 113 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~--ggGhs 113 (216)
-|.+|+++++++|+++++.|.|- .=||.
T Consensus 142 YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 171 (627)
T 2epl_X 142 YTVAELQEIEDYAADFDMSFVPCIQTLAHL 171 (627)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCSSSCC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeeccCCcH
Confidence 48999999999999999999875 34776
No 96
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=22.82 E-value=70 Score=29.94 Aligned_cols=33 Identities=12% Similarity=-0.042 Sum_probs=28.8
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhcCCcEEEEcC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKSGLQIRVRSG 110 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~~~~~~v~gg 110 (216)
.|- .|+.|.+.+|...++++|-+.+-|+.+|=.
T Consensus 531 iPnl~V~~Pad~~E~~~~l~~Ai~~~~Pv~ir~~ 564 (711)
T 3uk1_A 531 IPNLDVWRPADTVETAVAWTYAVAHQHPSCLIFS 564 (711)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEEECC
T ss_pred CCCCEEEecCCHHHHHHHHHHHHhcCCCEEEEee
Confidence 454 688999999999999999999999998854
No 97
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=22.77 E-value=24 Score=21.80 Aligned_cols=21 Identities=14% Similarity=0.321 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEc
Q 027960 89 SEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 89 ~dv~~~v~~a~~~~~~~~v~g 109 (216)
++.+++=.||+++|.+|.-||
T Consensus 13 ~~~~aIR~WAr~nG~~VsdRG 33 (55)
T 2kng_A 13 EQSAAIREWARRNGHNVSTRG 33 (55)
T ss_dssp THHHHHHHHHHHTTCCCCSSS
T ss_pred cChHHHHHHHHHcCCcCCCCC
Confidence 366778889999999987776
No 98
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.88 E-value=62 Score=27.72 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhcCCcEEE
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRV 107 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v 107 (216)
-|.+|++++|+.|+++|++|.+
T Consensus 74 Gt~~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999876
No 99
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=21.06 E-value=1.8e+02 Score=21.06 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=24.7
Q ss_pred cEEEEeC-CHHHHHHHHHHHHhcCCcEEEEcCCC
Q 027960 80 LFIITPF-HVSEIQAAIKCSKKSGLQIRVRSGGH 112 (216)
Q Consensus 80 ~~vv~P~-~~~dv~~~v~~a~~~~~~~~v~ggGh 112 (216)
...+.+. +.+.+..-++.|+++++||+++..-|
T Consensus 66 ~l~ing~l~~~~~~~YiklA~~~~i~fTiV~~~~ 99 (133)
T 2ohw_A 66 TLLINGELQYQSYSSYIQMASRYGVPFKIVSDLQ 99 (133)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred EEEEcCCCCHHHHHHHHHHHHHcCCCeEEecCCC
Confidence 3444444 35667788999999999999998733
No 100
>2e2s_A Agelenin; cystine knot, presynaptic calcium channel inhibitor, toxin; NMR {Allagelena opulenta}
Probab=20.93 E-value=28 Score=19.19 Aligned_cols=7 Identities=57% Similarity=1.398 Sum_probs=4.3
Q ss_pred CCccccc
Q 027960 3 PHGLFCP 9 (216)
Q Consensus 3 ~~~~~~~ 9 (216)
|||+||-
T Consensus 5 p~n~fCn 11 (36)
T 2e2s_A 5 PHNRFCN 11 (36)
T ss_dssp CTTSCCC
T ss_pred CCCCCcc
Confidence 5666664
No 101
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=20.92 E-value=1.5e+02 Score=20.08 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=23.8
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCcEEEEc
Q 027960 82 IITPFHVSEIQAAIKCSKKSGLQIRVRS 109 (216)
Q Consensus 82 vv~P~~~~dv~~~v~~a~~~~~~~~v~g 109 (216)
+-.+.+.+++.+++++.+++++.+.+.+
T Consensus 69 v~l~G~~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 69 TEMHGTQQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHCCCEEEEee
Confidence 4457788999999999999999888765
No 102
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=20.85 E-value=21 Score=24.14 Aligned_cols=20 Identities=15% Similarity=0.390 Sum_probs=0.0
Q ss_pred chHhhheeeEEEECCCCeeC
Q 027960 197 GVAADHIVDAHMIDAKGEKF 216 (216)
Q Consensus 197 G~~~D~v~~~~vV~~dG~iv 216 (216)
+...+++.+++||+++|..+
T Consensus 43 ~~~r~~L~~ikivD~~G~dv 62 (85)
T 2hep_A 43 SSMKNTLKSVKIIDPEGNDV 62 (85)
T ss_dssp --------------------
T ss_pred HHHHHHhcceeEECCCCCcC
Confidence 55778999999999999753
No 103
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=20.45 E-value=65 Score=24.31 Aligned_cols=60 Identities=7% Similarity=0.083 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEEcCCCCC---CCCCccCCCCeEEEEccCCceeEEeCCCCeEEecCCCcHHHHHHHHHh
Q 027960 86 FHVSEIQAAIKCSKKSGLQIRVRSGGHDL---EGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAE 162 (216)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~~~v~ggGhs~---~g~~~~~~~~gvvIdl~~~~~i~id~~~~~v~v~aGv~~~~l~~~l~~ 162 (216)
.+.+|+.++++.+.++++|+-+.|| ... .|... +.-+.|+ +.|.+ -...++.+.|.+
T Consensus 6 ~~~~d~~evl~~l~~~~v~~~i~GG-wAvD~~~G~~t-----------R~H~DiD-------i~v~~-~d~~~l~~~L~~ 65 (161)
T 4e8j_A 6 VTEKELFYILDLFEHMKVTYWLDGG-WGVDVLTGKQQ-----------REHRDID-------IDFDA-QHTQKVIQKLED 65 (161)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEHH-HHHHHHHTSCC-----------SCCSEEE-------EEEEG-GGHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCcEEEEcH-hhhhHhcCCCC-----------CcCCCeE-------EeecH-HhHHHHHHHHHH
Confidence 3678999999999999999988875 221 11100 1222232 23322 567788888888
Q ss_pred hCC
Q 027960 163 KSQ 165 (216)
Q Consensus 163 ~g~ 165 (216)
.|+
T Consensus 66 ~Gf 68 (161)
T 4e8j_A 66 IGY 68 (161)
T ss_dssp TTC
T ss_pred CCC
Confidence 865
No 104
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=20.25 E-value=85 Score=29.23 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=27.4
Q ss_pred Ccc-EEEEeCCHHHHHHHHHHHHhc-CCcEEEEcC
Q 027960 78 KPL-FIITPFHVSEIQAAIKCSKKS-GLQIRVRSG 110 (216)
Q Consensus 78 ~P~-~vv~P~~~~dv~~~v~~a~~~-~~~~~v~gg 110 (216)
.|- .|+.|.+.+|...++++|-+. +-|+.+|=.
T Consensus 510 iPnl~V~~Pad~~E~~~~l~~Ai~~~~~Pv~ir~~ 544 (690)
T 3m49_A 510 MPNVSVIRPADGNESVAAWRLALESTNKPTALVLT 544 (690)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHCSSSCEEEECC
T ss_pred CCCCEEEeeCCHHHHHHHHHHHHHcCCCCEEEEee
Confidence 454 589999999999999999987 678888743
Done!