Query 027961
Match_columns 216
No_of_seqs 121 out of 443
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 06:01:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 3E-87 1E-91 572.2 21.4 209 4-215 6-214 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 1.4E-86 4.7E-91 571.4 22.4 210 3-215 1-212 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.2E-86 7.6E-91 572.4 22.7 210 3-215 28-237 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 1.2E-84 4E-89 556.9 22.4 210 3-215 2-211 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 1.3E-83 4.3E-88 557.0 21.9 209 4-215 6-216 (260)
6 2npm_A 14-3-3 domain containin 100.0 2.1E-83 7.1E-88 555.3 22.2 207 5-215 27-236 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 2.1E-82 7.1E-87 549.0 16.1 204 5-215 28-238 (268)
8 2o8p_A 14-3-3 domain containin 100.0 8.7E-80 3E-84 522.4 18.4 191 5-207 2-198 (227)
9 3edt_B KLC 2, kinesin light ch 95.2 0.85 2.9E-05 35.7 18.0 57 150-207 143-199 (283)
10 3u3w_A Transcriptional activat 95.1 1.1 3.9E-05 36.7 19.4 59 150-210 171-229 (293)
11 3n71_A Histone lysine methyltr 94.9 0.21 7.2E-06 46.0 11.4 99 96-208 326-424 (490)
12 3qwp_A SET and MYND domain-con 94.4 0.2 6.9E-06 45.2 9.7 56 150-206 345-400 (429)
13 3nf1_A KLC 1, kinesin light ch 94.4 1.5 5.2E-05 34.9 20.0 187 7-208 28-226 (311)
14 3vtx_A MAMA; tetratricopeptide 94.4 1.1 3.9E-05 33.4 18.4 163 7-205 6-169 (184)
15 3qww_A SET and MYND domain-con 94.4 0.36 1.2E-05 43.7 11.4 98 96-207 315-412 (433)
16 3edt_B KLC 2, kinesin light ch 93.8 0.57 1.9E-05 36.7 10.2 57 150-207 101-157 (283)
17 4a1s_A PINS, partner of inscut 93.6 2.9 9.9E-05 35.1 20.6 190 7-209 49-255 (411)
18 3ulq_A Response regulator aspa 93.6 0.74 2.5E-05 39.1 11.2 74 122-208 101-174 (383)
19 3qww_A SET and MYND domain-con 93.2 0.28 9.7E-06 44.4 8.4 60 151-211 315-374 (433)
20 3sf4_A G-protein-signaling mod 93.2 3.2 0.00011 34.4 20.2 189 7-208 10-218 (406)
21 3n71_A Histone lysine methyltr 92.9 0.33 1.1E-05 44.7 8.4 60 151-211 326-385 (490)
22 3q15_A PSP28, response regulat 92.8 0.77 2.6E-05 39.1 10.2 76 121-209 98-173 (378)
23 2qfc_A PLCR protein; TPR, HTH, 92.6 3.6 0.00012 33.6 17.9 77 120-208 151-227 (293)
24 3ro2_A PINS homolog, G-protein 92.2 3.6 0.00012 32.6 20.3 189 7-208 6-214 (338)
25 3qwp_A SET and MYND domain-con 91.1 0.38 1.3E-05 43.4 6.5 60 151-211 304-363 (429)
26 3ulq_A Response regulator aspa 90.7 6.8 0.00023 33.0 15.7 74 123-208 142-215 (383)
27 4g1t_A Interferon-induced prot 90.4 7.8 0.00027 33.2 15.5 50 150-204 350-399 (472)
28 3hym_B Cell division cycle pro 90.0 6.3 0.00022 31.4 17.1 171 8-205 127-298 (330)
29 4gcn_A Protein STI-1; structur 89.8 1.1 3.6E-05 32.4 6.9 49 150-207 24-72 (127)
30 3ro3_A PINS homolog, G-protein 89.6 3.9 0.00013 28.5 10.4 54 151-207 66-119 (164)
31 3sf4_A G-protein-signaling mod 89.2 8.3 0.00028 31.8 18.4 181 8-207 49-257 (406)
32 3u4t_A TPR repeat-containing p 89.2 6.6 0.00023 30.6 16.2 53 152-205 197-249 (272)
33 2y4t_A DNAJ homolog subfamily 88.6 10 0.00035 32.0 15.6 47 150-205 311-357 (450)
34 3ieg_A DNAJ homolog subfamily 88.5 8.5 0.00029 30.9 18.5 47 150-205 288-334 (359)
35 2xpi_A Anaphase-promoting comp 86.7 16 0.00055 32.2 19.6 48 150-206 532-579 (597)
36 3fp2_A TPR repeat-containing p 86.6 15 0.00051 31.7 14.7 54 150-206 394-457 (537)
37 3rkv_A Putative peptidylprolyl 86.3 1.3 4.6E-05 32.6 5.7 55 150-205 27-91 (162)
38 4abn_A Tetratricopeptide repea 86.2 17 0.0006 32.1 17.8 173 7-205 103-286 (474)
39 4i17_A Hypothetical protein; T 86.1 9.8 0.00034 29.2 14.5 61 6-70 7-67 (228)
40 3q15_A PSP28, response regulat 86.0 14 0.00049 30.9 16.4 54 150-207 238-291 (378)
41 3u4t_A TPR repeat-containing p 85.9 8.7 0.0003 29.9 10.7 28 7-34 4-31 (272)
42 1fch_A Peroxisomal targeting s 85.8 13 0.00044 30.3 16.1 58 7-69 99-156 (368)
43 3fp2_A TPR repeat-containing p 85.8 16 0.00056 31.5 17.0 48 150-206 444-491 (537)
44 2ho1_A Type 4 fimbrial biogene 85.0 11 0.00039 28.9 15.1 57 8-69 39-95 (252)
45 4eqf_A PEX5-related protein; a 85.0 15 0.00051 30.2 17.0 59 7-70 66-124 (365)
46 4b4t_Q 26S proteasome regulato 84.3 18 0.0006 30.5 17.6 58 150-209 191-248 (434)
47 4gco_A Protein STI-1; structur 84.1 3.5 0.00012 29.6 6.9 46 151-205 30-75 (126)
48 4gcn_A Protein STI-1; structur 83.9 4.1 0.00014 29.2 7.2 54 150-205 58-111 (127)
49 1elr_A TPR2A-domain of HOP; HO 83.8 4.3 0.00015 27.4 7.0 55 150-206 54-108 (131)
50 2gw1_A Mitochondrial precursor 83.6 20 0.00068 30.6 17.0 56 150-206 205-266 (514)
51 4gyw_A UDP-N-acetylglucosamine 82.9 34 0.0011 32.7 16.5 57 7-68 10-66 (723)
52 3ro2_A PINS homolog, G-protein 82.6 16 0.00054 28.7 18.3 55 150-208 199-254 (338)
53 3gw4_A Uncharacterized protein 81.9 5.1 0.00017 29.7 7.3 73 123-208 65-138 (203)
54 2q7f_A YRRB protein; TPR, prot 81.9 15 0.0005 27.8 17.3 165 6-206 57-222 (243)
55 4g1t_A Interferon-induced prot 81.6 3.5 0.00012 35.4 7.1 55 150-205 67-122 (472)
56 4a1s_A PINS, partner of inscut 81.3 22 0.00076 29.5 17.8 182 8-208 88-294 (411)
57 2l6j_A TPR repeat-containing p 80.6 5.7 0.00019 26.4 6.6 46 151-205 21-66 (111)
58 3sz7_A HSC70 cochaperone (SGT) 80.2 11 0.00037 27.5 8.6 45 152-205 63-107 (164)
59 3hym_B Cell division cycle pro 80.1 20 0.00069 28.3 17.7 56 150-206 209-265 (330)
60 3qky_A Outer membrane assembly 80.0 20 0.00068 28.2 16.8 184 5-205 14-223 (261)
61 1hz4_A MALT regulatory protein 79.9 7.2 0.00025 32.4 8.3 56 151-207 110-165 (373)
62 2pl2_A Hypothetical conserved 79.9 19 0.00065 27.8 14.5 58 7-69 6-63 (217)
63 2q7f_A YRRB protein; TPR, prot 79.7 18 0.0006 27.4 12.5 164 7-206 24-188 (243)
64 2dba_A Smooth muscle cell asso 79.4 6.3 0.00022 27.4 6.7 33 170-203 59-91 (148)
65 3u3w_A Transcriptional activat 79.0 18 0.00062 29.2 10.3 54 150-207 131-185 (293)
66 1na3_A Designed protein CTPR2; 78.9 8.8 0.0003 24.4 6.9 48 150-206 25-72 (91)
67 4eqf_A PEX5-related protein; a 78.8 26 0.00087 28.7 16.5 59 6-69 99-157 (365)
68 3lf9_A 4E10_D0_1IS1A_001_C (T1 78.8 13 0.00045 28.0 8.3 49 20-69 11-60 (121)
69 2y4t_A DNAJ homolog subfamily 78.4 29 0.00099 29.1 18.3 167 10-205 147-323 (450)
70 2xev_A YBGF; tetratricopeptide 78.3 12 0.00039 25.6 7.8 49 151-205 56-104 (129)
71 3ma5_A Tetratricopeptide repea 77.8 8.6 0.00029 26.0 6.9 49 150-207 23-71 (100)
72 2vq2_A PILW, putative fimbrial 77.2 20 0.00067 26.6 17.2 59 7-70 9-67 (225)
73 3nf1_A KLC 1, kinesin light ch 77.2 24 0.00083 27.6 19.7 183 9-206 72-307 (311)
74 3k9i_A BH0479 protein; putativ 77.1 9.4 0.00032 26.3 7.0 48 150-206 43-90 (117)
75 2gw1_A Mitochondrial precursor 76.5 35 0.0012 29.0 16.1 173 7-206 305-478 (514)
76 2pl2_A Hypothetical conserved 76.1 25 0.00084 27.1 19.5 47 6-56 39-85 (217)
77 2kck_A TPR repeat; tetratricop 76.1 10 0.00036 24.6 6.8 46 151-205 23-68 (112)
78 3ro3_A PINS homolog, G-protein 76.0 17 0.00057 25.1 17.3 56 150-208 105-160 (164)
79 3ieg_A DNAJ homolog subfamily 75.8 28 0.00097 27.7 18.6 168 10-206 124-301 (359)
80 1xnf_A Lipoprotein NLPI; TPR, 75.3 26 0.00088 27.0 14.5 29 176-205 215-243 (275)
81 2kc7_A BFR218_protein; tetratr 74.8 13 0.00044 24.3 7.0 48 151-206 17-64 (99)
82 2ifu_A Gamma-SNAP; membrane fu 74.7 33 0.0011 28.0 15.2 52 151-206 132-184 (307)
83 3gyz_A Chaperone protein IPGC; 74.2 7.2 0.00025 29.3 6.1 47 150-205 86-132 (151)
84 2hr2_A Hypothetical protein; a 73.8 13 0.00043 29.1 7.5 54 150-205 27-85 (159)
85 2xev_A YBGF; tetratricopeptide 73.8 8.9 0.0003 26.2 6.1 50 151-206 19-68 (129)
86 3k9i_A BH0479 protein; putativ 72.3 8.2 0.00028 26.6 5.6 50 151-206 7-56 (117)
87 2v5f_A Prolyl 4-hydroxylase su 72.2 21 0.00072 24.5 8.0 53 151-205 22-74 (104)
88 3upv_A Heat shock protein STI1 71.4 15 0.00051 25.3 6.9 16 190-205 85-100 (126)
89 1qqe_A Vesicular transport pro 71.3 39 0.0013 27.3 13.3 27 8-34 39-65 (292)
90 4gco_A Protein STI-1; structur 71.2 14 0.00049 26.2 6.9 47 150-205 63-109 (126)
91 3cv0_A Peroxisome targeting si 71.0 36 0.0012 26.8 17.4 27 8-34 23-49 (327)
92 2xpi_A Anaphase-promoting comp 71.0 53 0.0018 28.7 21.1 54 150-206 491-545 (597)
93 1fch_A Peroxisomal targeting s 70.8 40 0.0014 27.2 19.9 58 7-69 65-122 (368)
94 2lni_A Stress-induced-phosphop 70.7 16 0.00056 24.6 6.9 47 151-206 67-113 (133)
95 3q49_B STIP1 homology and U bo 69.2 18 0.0006 24.9 6.9 26 180-206 81-106 (137)
96 1elr_A TPR2A-domain of HOP; HO 69.2 21 0.00072 23.7 7.2 50 150-208 20-69 (131)
97 3upv_A Heat shock protein STI1 68.4 19 0.00065 24.7 6.9 13 151-163 55-67 (126)
98 2kat_A Uncharacterized protein 68.2 22 0.00076 24.0 7.2 49 150-207 35-83 (115)
99 3vtx_A MAMA; tetratricopeptide 67.9 17 0.00058 26.6 6.9 47 150-205 21-67 (184)
100 1ihg_A Cyclophilin 40; ppiase 67.6 8.1 0.00028 33.5 5.6 54 151-205 240-301 (370)
101 1elw_A TPR1-domain of HOP; HOP 67.0 20 0.00069 23.3 6.6 46 151-205 55-100 (118)
102 3cv0_A Peroxisome targeting si 66.9 44 0.0015 26.2 16.6 29 6-34 55-83 (327)
103 1xi4_A Clathrin heavy chain; a 66.7 28 0.00096 36.7 10.0 25 181-205 1284-1308(1630)
104 2ifu_A Gamma-SNAP; membrane fu 66.3 52 0.0018 26.8 13.6 51 150-204 171-222 (307)
105 2fbn_A 70 kDa peptidylprolyl i 65.6 21 0.00073 26.8 7.2 49 151-205 55-116 (198)
106 2vyi_A SGTA protein; chaperone 65.6 25 0.00084 23.3 6.9 25 180-205 84-108 (131)
107 2vyi_A SGTA protein; chaperone 65.3 25 0.00086 23.2 6.9 22 12-33 18-39 (131)
108 2vgx_A Chaperone SYCD; alterna 65.0 19 0.00065 26.2 6.6 47 150-205 71-117 (148)
109 3rkv_A Putative peptidylprolyl 64.8 36 0.0012 24.4 9.2 46 151-205 80-125 (162)
110 1xnf_A Lipoprotein NLPI; TPR, 64.5 42 0.0014 25.7 8.9 48 150-206 93-140 (275)
111 1a17_A Serine/threonine protei 63.5 25 0.00085 24.7 6.9 46 151-205 64-109 (166)
112 1elw_A TPR1-domain of HOP; HOP 63.5 27 0.00094 22.6 6.9 48 150-206 20-67 (118)
113 4ga2_A E3 SUMO-protein ligase 62.5 25 0.00087 25.5 6.9 46 151-205 48-93 (150)
114 3as5_A MAMA; tetratricopeptide 62.2 38 0.0013 23.8 17.0 164 8-207 10-174 (186)
115 3q49_B STIP1 homology and U bo 61.9 33 0.0011 23.4 7.2 11 152-162 61-71 (137)
116 2hr2_A Hypothetical protein; a 61.9 20 0.00067 27.9 6.3 55 151-206 74-131 (159)
117 4gfq_A Ribosome-recycling fact 61.5 22 0.00075 29.2 6.7 69 40-113 127-199 (209)
118 1qqe_A Vesicular transport pro 61.5 30 0.001 28.1 7.8 54 151-207 54-107 (292)
119 2dba_A Smooth muscle cell asso 61.4 29 0.00098 23.8 6.8 48 150-206 81-128 (148)
120 1lyp_A CAP18; lipopolysacchari 61.3 19 0.00066 20.1 4.4 27 85-111 4-30 (32)
121 2xcb_A PCRH, regulatory protei 61.1 26 0.00088 24.9 6.6 48 150-206 68-115 (142)
122 1a17_A Serine/threonine protei 60.5 31 0.0011 24.2 6.9 48 150-206 29-76 (166)
123 3qky_A Outer membrane assembly 59.9 59 0.002 25.3 16.9 51 150-206 113-177 (261)
124 1p5q_A FKBP52, FK506-binding p 59.9 10 0.00036 31.9 4.8 55 150-205 163-224 (336)
125 1na0_A Designed protein CTPR3; 59.7 33 0.0011 22.3 6.9 25 180-205 81-105 (125)
126 3uq3_A Heat shock protein STI1 59.6 53 0.0018 24.7 18.1 56 7-68 6-61 (258)
127 3uq3_A Heat shock protein STI1 59.5 54 0.0018 24.6 16.5 49 150-207 189-237 (258)
128 2e2e_A Formate-dependent nitri 59.4 31 0.001 25.1 6.9 47 151-206 98-144 (177)
129 2qfc_A PLCR protein; TPR, HTH, 58.9 30 0.001 27.8 7.4 178 7-206 76-266 (293)
130 1na0_A Designed protein CTPR3; 58.7 35 0.0012 22.2 6.9 25 10-34 13-37 (125)
131 1kt0_A FKBP51, 51 kDa FK506-bi 58.6 20 0.00069 31.6 6.6 54 150-205 284-345 (457)
132 1hh8_A P67PHOX, NCF-2, neutrop 57.8 32 0.0011 25.6 6.9 47 150-205 53-99 (213)
133 2lni_A Stress-induced-phosphop 57.2 17 0.00059 24.4 4.8 47 151-206 33-79 (133)
134 2fbn_A 70 kDa peptidylprolyl i 57.2 33 0.0011 25.6 6.9 46 151-205 105-150 (198)
135 3urz_A Uncharacterized protein 55.7 35 0.0012 26.0 6.9 29 6-34 4-32 (208)
136 3as5_A MAMA; tetratricopeptide 54.9 42 0.0015 23.6 6.9 47 151-206 93-139 (186)
137 1dd5_A Ribosome recycling fact 54.2 37 0.0013 27.3 6.8 69 40-113 103-175 (185)
138 1wao_1 Serine/threonine protei 53.5 30 0.001 30.9 6.9 25 180-205 78-102 (477)
139 3gyz_A Chaperone protein IPGC; 53.4 43 0.0015 24.8 6.9 47 150-205 52-98 (151)
140 2xcb_A PCRH, regulatory protei 52.7 49 0.0017 23.3 6.9 47 150-205 34-80 (142)
141 1ise_A Ribosome recycling fact 52.4 38 0.0013 27.1 6.6 69 40-113 103-175 (185)
142 2c2l_A CHIP, carboxy terminus 52.4 29 0.001 28.1 6.2 49 156-208 53-103 (281)
143 1is1_A Ribosome recycling fact 51.5 40 0.0014 27.0 6.6 69 40-113 103-175 (185)
144 1ya0_A SMG-7 transcript varian 51.4 52 0.0018 30.2 8.2 47 130-188 158-210 (497)
145 2ho1_A Type 4 fimbrial biogene 50.2 80 0.0027 23.9 16.7 62 6-72 71-132 (252)
146 1wqg_A Ribosome recycling fact 50.2 43 0.0015 26.8 6.6 69 40-113 103-175 (185)
147 2yhc_A BAMD, UPF0169 lipoprote 50.0 83 0.0029 24.0 18.6 65 7-73 5-69 (225)
148 1hxi_A PEX5, peroxisome target 49.9 31 0.0011 24.1 5.3 47 150-205 67-113 (121)
149 1zu2_A Mitochondrial import re 49.8 45 0.0016 25.8 6.6 70 130-204 42-118 (158)
150 1ge9_A Ribosome recycling fact 49.7 58 0.002 26.0 7.3 70 40-113 105-174 (184)
151 2vgx_A Chaperone SYCD; alterna 49.6 56 0.0019 23.6 6.9 46 151-205 38-83 (148)
152 1eh1_A Ribosome recycling fact 48.8 38 0.0013 27.2 6.1 73 40-113 104-176 (185)
153 4ga2_A E3 SUMO-protein ligase 48.0 30 0.001 25.1 5.1 47 150-205 13-59 (150)
154 2yhc_A BAMD, UPF0169 lipoprote 47.1 79 0.0027 24.1 7.8 49 151-205 21-69 (225)
155 1hxi_A PEX5, peroxisome target 46.8 69 0.0024 22.1 6.9 47 150-205 33-79 (121)
156 2fo7_A Synthetic consensus TPR 45.3 61 0.0021 21.1 6.4 25 10-34 5-29 (136)
157 1hh8_A P67PHOX, NCF-2, neutrop 44.2 93 0.0032 22.9 13.5 55 150-205 87-149 (213)
158 1w3b_A UDP-N-acetylglucosamine 43.2 1.4E+02 0.0046 24.5 15.7 28 7-34 68-95 (388)
159 3bee_A Putative YFRE protein; 42.6 39 0.0013 23.1 4.7 28 7-34 44-71 (93)
160 4i17_A Hypothetical protein; T 42.4 61 0.0021 24.4 6.3 47 150-205 58-104 (228)
161 1p5q_A FKBP52, FK506-binding p 39.6 74 0.0025 26.5 6.9 46 151-205 213-258 (336)
162 2ooe_A Cleavage stimulation fa 39.6 47 0.0016 29.2 5.9 54 150-212 62-115 (530)
163 2wb7_A PT26-6P; extra chromoso 38.5 1.3E+02 0.0044 27.9 8.6 65 138-203 436-513 (526)
164 2if4_A ATFKBP42; FKBP-like, al 38.1 33 0.0011 28.8 4.4 49 151-205 196-258 (338)
165 4abn_A Tetratricopeptide repea 37.1 2.1E+02 0.0072 24.9 17.3 47 6-57 137-183 (474)
166 4gyw_A UDP-N-acetylglucosamine 36.9 69 0.0024 30.5 6.9 22 181-203 116-137 (723)
167 1wao_1 Serine/threonine protei 36.7 62 0.0021 28.7 6.2 9 191-199 124-132 (477)
168 2kat_A Uncharacterized protein 36.5 92 0.0032 20.6 12.6 60 6-70 19-78 (115)
169 2wh5_A Acyl-COA-binding domain 36.5 67 0.0023 23.3 5.3 49 20-70 10-74 (106)
170 2g0u_A Type III secretion syst 33.9 33 0.0011 24.5 3.1 59 122-187 6-68 (92)
171 3ma5_A Tetratricopeptide repea 32.4 1.1E+02 0.0037 20.1 9.9 58 6-68 7-64 (100)
172 2e2e_A Formate-dependent nitri 32.3 1E+02 0.0035 22.1 5.9 49 150-206 60-110 (177)
173 2c2l_A CHIP, carboxy terminus 31.8 1.6E+02 0.0054 23.6 7.5 14 190-203 51-64 (281)
174 3gw4_A Uncharacterized protein 30.7 1.5E+02 0.0051 21.3 19.3 57 150-209 123-179 (203)
175 2vsy_A XCC0866; transferase, g 28.3 1.3E+02 0.0044 26.7 6.9 46 151-205 74-119 (568)
176 3caz_A BAR protein; thermo-aci 28.2 2.4E+02 0.0083 22.9 11.2 111 12-166 100-210 (294)
177 3sz7_A HSC70 cochaperone (SGT) 27.6 1.6E+02 0.0056 20.8 11.5 26 9-34 14-39 (164)
178 3mkr_A Coatomer subunit epsilo 27.4 1.6E+02 0.0053 23.8 6.8 46 151-205 183-228 (291)
179 1ouv_A Conserved hypothetical 27.3 1.5E+02 0.005 22.9 6.4 16 190-205 55-70 (273)
180 2w2u_A Hypothetical P60 katani 25.9 87 0.003 21.5 4.2 27 8-34 21-47 (83)
181 1ihg_A Cyclophilin 40; ppiase 25.6 1.2E+02 0.004 25.9 5.9 47 151-206 290-336 (370)
182 2l6j_A TPR repeat-containing p 25.1 1.4E+02 0.0047 19.0 6.2 29 6-34 4-32 (111)
183 1w3b_A UDP-N-acetylglucosamine 23.3 3E+02 0.01 22.3 16.8 16 190-205 216-231 (388)
184 1tdp_A Carnobacteriocin B2 imm 23.2 2.2E+02 0.0074 20.9 6.0 67 47-131 9-82 (111)
185 2w9y_A CE-FAR-7, fatty acid/re 22.7 77 0.0026 24.3 3.6 75 96-173 60-136 (140)
186 2v6y_A AAA family ATPase, P60 22.2 1.1E+02 0.0039 20.7 4.2 27 8-34 13-39 (83)
187 3iyk_A VP5; icosahedral virus; 21.7 4.8E+02 0.016 24.1 9.2 73 20-95 121-199 (526)
188 1kt0_A FKBP51, 51 kDa FK506-bi 21.5 1.9E+02 0.0066 25.1 6.6 46 151-205 334-379 (457)
189 2kck_A TPR repeat; tetratricop 21.2 1.6E+02 0.0055 18.4 7.6 26 9-34 9-34 (112)
190 2if4_A ATFKBP42; FKBP-like, al 20.9 1.6E+02 0.0054 24.5 5.7 46 151-205 247-292 (338)
191 2r17_C Vacuolar protein sortin 20.7 66 0.0023 27.7 3.2 42 150-192 211-253 (298)
192 2h9r_C 22-MER from A-kinase an 20.2 1E+02 0.0036 16.3 2.7 21 193-213 3-23 (26)
193 2h6f_A Protein farnesyltransfe 20.1 4.1E+02 0.014 22.6 14.2 58 7-69 98-156 (382)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=3e-87 Score=572.21 Aligned_cols=209 Identities=54% Similarity=0.808 Sum_probs=204.4
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhh
Q 027961 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (216)
Q Consensus 4 ~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~ 83 (216)
.+|++++|+|||+|||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~-~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~ 82 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVE--K-GEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK 82 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence 4799999999999999999999999999998 4 599999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027961 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (216)
Q Consensus 84 ~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (216)
++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+++
T Consensus 83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i 162 (236)
T 3iqu_A 83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 162 (236)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
|+++|||||||||||+||||||||||+|+|++||++||+|||+||+++|+|+
T Consensus 163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~ 214 (236)
T 3iqu_A 163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLS 214 (236)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999986
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=1.4e-86 Score=571.40 Aligned_cols=210 Identities=51% Similarity=0.805 Sum_probs=200.9
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 3 ~~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
|.+|++++|+|||+|||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~-~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--L-NEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHH
Q 027961 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (216)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (216)
+++.+++||++|++||..+|++|+++||++|||.++++ +++|||+|||||||||+|||.+|++|++++++|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 161 ~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
+++|+++||||||||||||||||||||||+|+|++||.+||+|||+||+++|+|+
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~ 212 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLN 212 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCC
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999999999999999986
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.2e-86 Score=572.45 Aligned_cols=210 Identities=62% Similarity=0.954 Sum_probs=204.3
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 3 ~~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
|.+|++++|+|||+|||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~-~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027961 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (216)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (216)
+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
+|+++||||||||||||||||||||||+|+|++||++||+|||+||+++|+|+
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~ 237 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLS 237 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCC
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999986
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=1.2e-84 Score=556.85 Aligned_cols=210 Identities=62% Similarity=0.954 Sum_probs=203.5
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 3 ~~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
|++|++++|+|||++||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~-~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--c-cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 45799999999999999999999999999998 3 58999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027961 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (216)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (216)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
+|+.+||||||+||||+||||||||||+|+|++||++||+|||+||+++|+|+
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~ 211 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLS 211 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCC
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccC
Confidence 99989999999999999999999999999999999999999999999999986
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.3e-83 Score=557.03 Aligned_cols=209 Identities=71% Similarity=1.052 Sum_probs=203.9
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCch
Q 027961 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA--TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (216)
Q Consensus 4 ~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~--~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~ 81 (216)
++|++++|+|||++||||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~-~--~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~ 82 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN-S--LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-T--CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc-c--CCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcH
Confidence 4799999999999999999999999999998 3 5 899999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHH
Q 027961 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (216)
Q Consensus 82 ~~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (216)
.+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+
T Consensus 83 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 162 (260)
T 1o9d_A 83 EHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 162 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
++|+.+|||||||||||+||||||||||+|+|++||.+||+|||+||+++|+|+
T Consensus 163 ~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~ 216 (260)
T 1o9d_A 163 DIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLG 216 (260)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccC
Confidence 999989999999999999999999999999999999999999999999999885
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=2.1e-83 Score=555.31 Aligned_cols=207 Identities=58% Similarity=0.911 Sum_probs=201.6
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCch
Q 027961 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA---TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (216)
Q Consensus 5 ~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~---~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~ 81 (216)
+|++++|+|||++||||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~-~--~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~ 103 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE-A--RQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAE 103 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-S--CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-c--cCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcH
Confidence 599999999999999999999999999998 3 5 799999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHH
Q 027961 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (216)
Q Consensus 82 ~~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (216)
.+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+
T Consensus 104 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 183 (260)
T 2npm_A 104 DASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDAT 183 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG 215 (216)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~ 215 (216)
++| .+|||||||||||+||||||||||+|+|++||++||+|||+||+++|+|+
T Consensus 184 ~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~ 236 (260)
T 2npm_A 184 VVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLS 236 (260)
T ss_dssp HHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCC
T ss_pred HHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCC
Confidence 999 89999999999999999999999999999999999999999999999986
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=2.1e-82 Score=549.02 Aligned_cols=204 Identities=23% Similarity=0.383 Sum_probs=174.9
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhh-hccCc-hh
Q 027961 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (216)
Q Consensus 5 ~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~-~~~~~-~~ 82 (216)
+|++++|+|||+|||||||||+++| ++ . +++||.||||||||||||+||++|+|||+|+++||++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~-~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--S-SDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--c-CCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 6999999999999999999999999 66 3 5999999999999999999999999999999999999 77787 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027961 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (216)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (216)
+++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---HHhhcCCCC
Q 027961 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL---TRLVSPFLG 215 (216)
Q Consensus 163 ~a~~~L--~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~---ai~~~~~l~ 215 (216)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||+++|+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ 238 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFS 238 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCC
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCC
Confidence 999899 99999999999999999999999999999999999999 999999985
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=8.7e-80 Score=522.41 Aligned_cols=191 Identities=21% Similarity=0.277 Sum_probs=183.1
Q ss_pred cHHhHH---HHHHHHHHhCCHHHHHHHHHHHhhc---cCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhcc
Q 027961 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTS---STPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGR 78 (216)
Q Consensus 5 ~r~~li---~~Aklaeq~ery~Dm~~~mk~~~~~---~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~ 78 (216)
+|++++ |+|||++||||||||+++||++++. . +++||.||||||||||||+||++|+|||+|+++||++ +
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~--~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k 77 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFE--NSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--L 77 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--C
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--c
Confidence 589999 9999999999999999999999972 3 4899999999999999999999999999999999998 6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHH
Q 027961 79 KNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYK 158 (216)
Q Consensus 79 ~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 158 (216)
|++.+++++++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||.+|+ +++|+++|+
T Consensus 78 ~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~ 149 (227)
T 2o8p_A 78 NNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQ 149 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHH
Confidence 788899999999999999999999999999999999998 999999999999999999999998 899999999
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 159 AAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 159 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
+|+++|+++|||||||||||+||||||||||+|+|++||.+||+|||.+
T Consensus 150 ~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 150 DAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999999899999999999999999999999999999999999999954
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.19 E-value=0.85 Score=35.68 Aligned_cols=57 Identities=26% Similarity=0.261 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|+++.+...++.+|.......|.+..++. .|+.++|+...++++..+
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 467899999999999888888999888888899888887 799999999999998764
No 10
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.11 E-value=1.1 Score=36.69 Aligned_cols=59 Identities=7% Similarity=0.030 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLV 210 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~ 210 (216)
-++|...|++|++++. .++..+|....+..|.+..|++ +|+.++|+...++|++-+...
T Consensus 171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHc
Confidence 4678999999999886 4666777777789999999998 799999999999998877544
No 11
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.94 E-value=0.21 Score=46.02 Aligned_cols=99 Identities=10% Similarity=0.052 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 027961 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (216)
Q Consensus 96 ~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (216)
+|-..+|...+.+-.+.|=|...+ ..=-+.--|..|+..-. -+.|...|++|+++-++.|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~---~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLY---VLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 455677788888777766444311 11112223333332211 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 176 LGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
+....|.++.|+. .|+.++|..+.++|++--.
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 9999999999887 7999999999999986443
No 12
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.44 E-value=0.2 Score=45.22 Aligned_cols=56 Identities=9% Similarity=0.029 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
-+.|...|++|+++-++.++|.||.......|.++-|.. .|+.++|..+.++|++-
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999887 89999999999999764
No 13
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.42 E-value=1.5 Score=34.90 Aligned_cols=187 Identities=17% Similarity=0.158 Sum_probs=101.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccC--C--CCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhh-hhc--cC
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSST--P--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQK-EEG--RK 79 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~--~--~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk-~~~--~~ 79 (216)
+-+..++.+....|+|++++.+++++++... . +.+....-...++.+|-. .+....+...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566788888999999999999999885210 0 011122223334444322 23333344333321111 000 00
Q ss_pred chh----hHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHH
Q 027961 80 NEE----HVSLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTM 154 (216)
Q Consensus 80 ~~~----~~~~i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 154 (216)
.+. ...+..-|.. .=-++-...+...+++.....-+. .......+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 010 0111111111 111233344444444443322111 122233333344444322 11 46789
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 155 LSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 155 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
..|++|+++.....++.+|.......+.+..++. .|+.++|+...+++.+.+.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 9999999999888888899888888888888877 7999999999999987543
No 14
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.42 E-value=1.1 Score=33.41 Aligned_cols=163 Identities=13% Similarity=0.134 Sum_probs=86.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~ 86 (216)
.-...++.+..+-|+|++++++.+++++ . +|. +.+=...+..+|-. .+....+...+.......... .......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK-A--DPN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTS-AEAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchh-HHHHHHH
Confidence 4556789999999999999999999998 2 244 45555666666644 344444544444332221111 0001111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027961 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (216)
Q Consensus 87 i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (216)
..-+.. .-.++-...+...+.+ -|.. .. .+...|..|.-+ |+ -+.|.+.|++++++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 111111 0011112222222221 2221 11 123345444322 11 35688889988864
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 45554 345566666665 8999999998888865
No 15
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.39 E-value=0.36 Score=43.74 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 027961 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (216)
Q Consensus 96 ~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (216)
+|...+|...+.+-.+.|=|...+ ..=-+.--|.-|+.+ |+ -+.|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----QD-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455677777777777766444321 111112223322221 11 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 176 LGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.....|.++-|+. .|+.++|..+-++|++--
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHH
Confidence 9999999999887 899999999999997643
No 16
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.77 E-value=0.57 Score=36.72 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|+.+.++...|.||.......|.+..++. +|+.++|+...++|++..
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 356899999999999888888999999999999988886 799999999999998764
No 17
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.56 E-value=2.9 Score=35.12 Aligned_cols=190 Identities=16% Similarity=0.111 Sum_probs=99.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
..+..++....+.|+|++++.+++++++ . ++. +.+ =...+..+|-. .+....+...+....+..+..++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~-~--~~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ-A--GTE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CCS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH-h--ccc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 4566788888999999999999999997 2 243 222 23344444432 3444445444432221111111111
Q ss_pred -hH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhc-------ccchhHHHH
Q 027961 83 -HV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF-------KVGDERKAA 149 (216)
Q Consensus 83 -~~----~~i~~yr-~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~ 149 (216)
.. .+..-|. ..--++-...+...+.+.... .+.......+...|..|...-.. ...++-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 1111111 111233344455555554332 12223333444455555544330 001122334
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRL 209 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (216)
.+.|...|++|++++... +.+|.......|.+..++. .|+.++|+...++|++..-.
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHh
Confidence 677889999999888643 2345555555666666655 89999999998888775543
No 18
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=93.56 E-value=0.74 Score=39.11 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=50.5
Q ss_pred hHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 027961 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (216)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk 201 (216)
...+|+-.+|.++...-. -+.|...|++|++++.. . |.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345666667777654432 45689999999988763 3 2334344455566666665 899999999999
Q ss_pred HHHHHHH
Q 027961 202 QEKTLTR 208 (216)
Q Consensus 202 ~Afd~ai 208 (216)
+|.+-+-
T Consensus 168 ~al~~~~ 174 (383)
T 3ulq_A 168 QAYEIYK 174 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987643
No 19
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.23 E-value=0.28 Score=44.42 Aligned_cols=60 Identities=7% Similarity=-0.079 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVS 211 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~ 211 (216)
+.|...|++|+++.++-|.|.||-.+...-|.+.-|.. +|+.++|..+.++|++---..+
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~l 374 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHY 374 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHc
Confidence 46788999999999989999999999999999888877 8999999999999987554443
No 20
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.18 E-value=3.2 Score=34.41 Aligned_cols=189 Identities=14% Similarity=0.067 Sum_probs=97.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
..+..++..+-+.|+|++++.++.++++. ++. +.+ =...++.+|-. .+....+...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQV---GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhc---Ccc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 45667888889999999999999999972 233 222 23344444432 2334444444332111111111111
Q ss_pred h-H----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhh-------ccc---chhH
Q 027961 83 H-V----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FKV---GDER 146 (216)
Q Consensus 83 ~-~----~~i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~~ 146 (216)
. . .+..-|.. .--++-...+...+++.... .++......+-..|..|...-. ... .++-
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 0 0 11111111 11233344455555554432 1222233334444554444433 111 1233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
....+.|...|++|+.++.. . +.+|.......|.+..++. .|+.++|+...++|+..+-
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 34467788889999888864 3 3445555556666666665 7999999998888876543
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.87 E-value=0.33 Score=44.69 Aligned_cols=60 Identities=15% Similarity=-0.026 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVS 211 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~ 211 (216)
+.|...|++|+++.++-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++-....+
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~l 385 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKLY 385 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHc
Confidence 35778899999999989999999999999999988887 7999999999999987654443
No 22
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=92.79 E-value=0.77 Score=39.08 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=53.3
Q ss_pred chHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHH
Q 027961 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMA 200 (216)
Q Consensus 121 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iA 200 (216)
.-..+|+-.+|.++...-. -+.|...|++|+.++.. + +.+|..-....|.+..|+. +|++++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-V-SDDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-C-CChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566677877654432 35689999999988763 3 2345555566667777776 89999999999
Q ss_pred HHHHHHHHh
Q 027961 201 KQEKTLTRL 209 (216)
Q Consensus 201 k~Afd~ai~ 209 (216)
++|.+-...
T Consensus 165 ~~al~~~~~ 173 (378)
T 3q15_A 165 LQALDIYQN 173 (378)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999876543
No 23
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.60 E-value=3.6 Score=33.56 Aligned_cols=77 Identities=6% Similarity=0.014 Sum_probs=52.9
Q ss_pred CchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHH
Q 027961 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTM 199 (216)
Q Consensus 120 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~i 199 (216)
....+..+...|..|...-+ -+.|...|++|+++++. .+...........|.+..|+. +|+.++|+..
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 33344445556776654322 45689999999998863 442222333577788888776 8999999999
Q ss_pred HHHHHHHHH
Q 027961 200 AKQEKTLTR 208 (216)
Q Consensus 200 Ak~Afd~ai 208 (216)
.++|.+-+.
T Consensus 219 ~~kal~~~~ 227 (293)
T 2qfc_A 219 VNKAIEISC 227 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 24
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.20 E-value=3.6 Score=32.62 Aligned_cols=189 Identities=12% Similarity=0.037 Sum_probs=98.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~ 82 (216)
..+...+....+.|+|++++.+++++++ . .+. +.+ =...+..+|-. .+....+...+....+-....++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~-~--~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ-V--GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh-h--Ccc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 4677889999999999999999999997 2 133 322 12233444332 2333444444432211111111111
Q ss_pred h-H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcc----------cchhH
Q 027961 83 H-V----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (216)
Q Consensus 83 ~-~----~~i~~yr-~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~ 146 (216)
. . .+..-|. ..--++-...+...+++.... .++......+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 1 0 1111111 111233344455555554432 223334445556677766654410 01122
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
....+.|...|++|+.++... +.+|.......+.+..++. .|+.++|+...++|++.+.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 334667888888888887642 2334444455555555554 7999999988888876543
No 25
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.07 E-value=0.38 Score=43.37 Aligned_cols=60 Identities=13% Similarity=-0.016 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVS 211 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~ 211 (216)
+.|...|++++++.++-|+|.||-.+...-|.+.-|.. .|+.++|..+.+++++-....+
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~l 363 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFF 363 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHc
Confidence 45677788888777778999999999999999888776 7999999999999987654443
No 26
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.72 E-value=6.8 Score=32.96 Aligned_cols=74 Identities=15% Similarity=0.133 Sum_probs=47.1
Q ss_pred HhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 027961 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (216)
Q Consensus 123 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~ 202 (216)
..-.+-..|..|..+-. .+.|...|++|+++..+ .+..+|-......|.+..|.. +|+.++|+...++
T Consensus 142 ~a~~~~~lg~~~~~~~~----------~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 209 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQ----------TYFSMDYARQAYEIYKE-HEAYNIRLLQCHSLFATNFLD-LKQYEDAISHFQK 209 (383)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHT-CSTTHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHHHHH-hcCHHHHHHHHHH
Confidence 33444455666655432 35689999999999874 333334333344444555554 8999999999888
Q ss_pred HHHHHH
Q 027961 203 EKTLTR 208 (216)
Q Consensus 203 Afd~ai 208 (216)
|.+.+-
T Consensus 210 al~~~~ 215 (383)
T 3ulq_A 210 AYSMAE 215 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886644
No 27
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.40 E-value=7.8 Score=33.17 Aligned_cols=50 Identities=14% Similarity=0.069 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEK 204 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (216)
-++|.+.|++|+++ .|.++..-.+.+++..+.+.-.++.++|+..-++|+
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35689999999853 345555556677888887767899999998776665
No 28
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.97 E-value=6.3 Score=31.44 Aligned_cols=171 Identities=8% Similarity=-0.080 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHH
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i 87 (216)
-+..++.+..+.|+|++++.+++++++ . .+. +..-...+..+|-. .+..-.+...+....+..... ......+.
T Consensus 127 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~--~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~-~~~~~~l~ 200 (330)
T 3hym_B 127 AWIAYGHSFAVESEHDQAMAAYFTAAQ-L--MKG-CHLPMLYIGLEYGL-TNNSKLAERFFSQALSIAPED-PFVMHEVG 200 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH-H--TTT-CSHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH-h--ccc-cHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHhCCCC-hHHHHHHH
Confidence 345666666777777777777777765 1 133 22223334444433 333344444443322221110 00111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027961 88 KDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (216)
Q Consensus 88 ~~yr-~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (216)
.-|. ..=-++-.......+++....- .........-.+...|..|... |+ .+.|...|++|+++.
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~la~~~~~~-----g~-----~~~A~~~~~~a~~~~-- 266 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIG--NEVTVDKWEPLLNNLGHVCRKL-----KK-----YAEALDYHRQALVLI-- 266 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTS--CSCTTTTCCHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHS--
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhcc--ccccccHHHHHHHHHHHHHHHh-----cC-----HHHHHHHHHHHHhhC--
Confidence 1111 1112333444444555433221 1111111111222344444322 11 456888899888652
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
|.+| ....+.+..++. +|+.++|+...++|++
T Consensus 267 ---~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 298 (330)
T 3hym_B 267 ---PQNA---STYSAIGYIHSL-MGNFENAVDYFHTALG 298 (330)
T ss_dssp ---TTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTTT
T ss_pred ---ccch---HHHHHHHHHHHH-hccHHHHHHHHHHHHc
Confidence 3443 234555666555 7999999988877754
No 29
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.79 E-value=1.1 Score=32.42 Aligned_cols=49 Identities=14% Similarity=0.270 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
-+.|...|++|+++ .|.+|. ...|.+..|+. +|+.++|+...++|+.-.
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~~---~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNIT---FYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 46789999999864 456653 55678888887 899999999988887643
No 30
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=89.60 E-value=3.9 Score=28.53 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
+.|...|++|++++... +.+|.......|.+..++. .|+.++|+...++|++.+
T Consensus 66 ~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 44566666666665432 1222233334444444444 566666666666665543
No 31
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=89.24 E-value=8.3 Score=31.77 Aligned_cols=181 Identities=14% Similarity=0.054 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccC--CCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh---
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSST--PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE--- 82 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~~~~--~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~--- 82 (216)
-+..++.+..+.|+|++++.++++.+.... +.++....=...++.+|. ..+....+...+.....-....++..
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 127 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKVGEA 127 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccccchH
Confidence 355788888899999999999988764210 001111112223333332 23444445544432221111111111
Q ss_pred --hHHHHHHHHHH-H--------------------HHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhh
Q 027961 83 --HVSLVKDYRSK-V--------------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE 139 (216)
Q Consensus 83 --~~~~i~~yr~k-i--------------------~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE 139 (216)
...+..-|... - -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 128 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~ 202 (406)
T 3sf4_A 128 RALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLLGN 202 (406)
T ss_dssp HHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHccC
Confidence 01111111111 1 233444555555554432 1122223333344555444321
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 140 FKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 140 ~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|++++... +.++.......|.+..++. .|+.++|+...++|++.+
T Consensus 203 ----------~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 203 ----------FRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLLA 257 (406)
T ss_dssp ----------HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHH
Confidence 345778888888877642 2223333344455555554 788888888887776544
No 32
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=89.21 E-value=6.6 Score=30.63 Aligned_cols=53 Identities=11% Similarity=-0.040 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.|...|++|+++....-.+.++.......+.+.+|+. .|+.++|+...++|+.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI-NRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3788899999988643333223333445555666554 8999999999888864
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.57 E-value=10 Score=32.01 Aligned_cols=47 Identities=9% Similarity=0.064 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+++ .|.+| ....+.+..+. ..|+.++|+...+++++
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 45677888887754 44554 34445555555 48999999998888865
No 34
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=88.49 E-value=8.5 Score=30.92 Aligned_cols=47 Identities=6% Similarity=0.010 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++++++ .|.+| ....+.+..++. .|+.++|+...++|++
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 45678888888764 44554 355666666655 8999999998888765
No 35
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.69 E-value=16 Score=32.18 Aligned_cols=48 Identities=6% Similarity=0.072 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++++++ .|.+| ....+.+..|. -.|+.++|....+++++.
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALVYL-HKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 45688888888765 35555 33344444444 489999999998888753
No 36
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=86.64 E-value=15 Score=31.75 Aligned_cols=54 Identities=9% Similarity=0.134 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHh----------CCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEIL----------NSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~----------~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+++.... +.-...+|..++.+..++. . |+.++|+...+++...
T Consensus 394 ~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~A~~~~~~a~~~ 457 (537)
T 3fp2_A 394 FDTAIKQYDIAKRLEEVQ--EKIHVGIGPLIGKATILAR-QSSQDPTQLDEEKFNAAIKLLTKACEL 457 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--SSCSSTTHHHHHHHHHHHH-HHTC----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcc--hhhHHHHHHHHHHHHHHHH-HhhccchhhhHhHHHHHHHHHHHHHHh
Confidence 457899999999887532 2233566767777766665 5 8899999888887653
No 37
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=86.34 E-value=1.3 Score=32.63 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCC-------CchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDL---APT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L---~pt-------~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 3568999999999865321 233 67788889999988887 7999999999888865
No 38
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=86.20 E-value=17 Score=32.12 Aligned_cols=173 Identities=16% Similarity=0.138 Sum_probs=92.3
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHH
Q 027961 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (216)
Q Consensus 7 ~~li~~Aklaeq~ery-~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~ 85 (216)
+-+..++++....|+| ++++.+++++++ . +|. +.+=...+..+|-. .+....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~-~--~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVK-L--EPE-LVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh-h--CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4456677777778888 888888888887 2 133 45556666666644 24444555444322221110 011111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHH
Q 027961 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (216)
Q Consensus 86 ~i~~yr~----------ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (216)
+..-|.. .=-++-...++..+++ -|.. .. .+-..|..|..+. +..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~--~~~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GR--SWYILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HH--HHHHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112333344444442 1321 12 2334555554331 11222 1123677899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|..
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 33233556677788888776 7999999998888754
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=86.14 E-value=9.8 Score=29.17 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=41.8
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~ 70 (216)
-+.+..++...-+.|+|++++.++.++++ . +++-+..-...+..+|-. .+....++..+..
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~--~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLK-L--TNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--TTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh-c--cCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 36788899999999999999999999997 2 242444444445555543 4555556555543
No 40
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=85.98 E-value=14 Score=30.94 Aligned_cols=54 Identities=7% Similarity=0.099 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
-+.|...|++|++++...- +|.......|.+..++. +|+.++|+...++|++.+
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 4678999999999987543 44444555666777665 899999999998887754
No 41
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=85.94 E-value=8.7 Score=29.93 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=25.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+.++.+|...-+.|+|++++.+++++++
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 31 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEA 31 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5678999999999999999999999997
No 42
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=85.85 E-value=13 Score=30.30 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=34.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
+-+..++.+....|+|++++.+++++++ . +|. +.+=...+..+|-. .+....+...+.
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~-~--~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLE-L--KPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHh-c--CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4456677777778888888888877776 2 133 44445555555543 344444444444
No 43
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=85.84 E-value=16 Score=31.47 Aligned_cols=48 Identities=8% Similarity=0.179 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+++ .|.+| ....+.+..|+. +|+.++|+...++|++.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 45678888888754 45555 345666666665 89999999988887664
No 44
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.04 E-value=11 Score=28.92 Aligned_cols=57 Identities=12% Similarity=0.042 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
-+..+|.+..+.|+|++++.+++++++ . ++. +.+-...+..+|-. .+..-.+...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~-~--~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALE-I--DPS-SADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHh-c--CCC-hHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345667777778888888888888776 2 132 34444445555433 344444545444
No 45
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=84.98 E-value=15 Score=30.20 Aligned_cols=59 Identities=10% Similarity=0.046 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~ 70 (216)
+.++.++....+.|+|++++.++++++. . +|. +.+=...+..+|-. .+....+...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL-Q--DPG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH-h--CcC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4578899999999999999999999997 2 243 45556666666654 3555556555543
No 46
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.25 E-value=18 Score=30.48 Aligned_cols=58 Identities=10% Similarity=-0.140 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRL 209 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (216)
-++|...|++|..++.. .+ ..|.-.|...+...-+|...++.++|+..-.+||+..-.
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 45689999999998863 43 233444666666666677789999999999999876543
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=84.08 E-value=3.5 Score=29.63 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 4577778777753 34443 345566666665 6888888777666643
No 48
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=83.89 E-value=4.1 Score=29.16 Aligned_cols=54 Identities=6% Similarity=-0.053 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|.+.|++|+++.. +.++.++.+-....|.+..+.. +++.++|++.-++|+.
T Consensus 58 ~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 58 FAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQK-QNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3568999999999875 4454555444455566666555 8999999988777654
No 49
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=83.77 E-value=4.3 Score=27.45 Aligned_cols=55 Identities=5% Similarity=-0.064 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|....+++++.
T Consensus 54 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 54 YNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 3568889999998875 3455555556667777777776 79999999888887663
No 50
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=83.59 E-value=20 Score=30.57 Aligned_cols=56 Identities=14% Similarity=0.015 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 5667888888887443334 4454 6666666777777766 79999999998887653
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=82.94 E-value=34 Score=32.71 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=38.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l 68 (216)
+-+..++.+..+.|+|++++.+.++.+++ +|+. .+=.+-|..+|.. .+..-.|...+
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l---~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~ 66 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV---FPEF-AAAHSNLASVLQQ-QGKLQEALMHY 66 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSCC-HHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 55678899999999999999999999982 2553 4445556666654 23333444333
No 52
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=82.63 E-value=16 Score=28.71 Aligned_cols=55 Identities=18% Similarity=0.066 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
.+.|...|++|++++... .+|...+ ...+.+..+ .-.|+.++|....+++++.+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHH
Confidence 356788888888887642 2333334 344444444 447999999988888876543
No 53
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=81.92 E-value=5.1 Score=29.75 Aligned_cols=73 Identities=10% Similarity=0.075 Sum_probs=46.9
Q ss_pred HhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHH
Q 027961 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAK 201 (216)
Q Consensus 123 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk 201 (216)
.+..+-..|..|...-+ .+.|...|++|++++. ..+ .+|...+ ...|.+..++. +|++++|....+
T Consensus 65 ~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 131 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALH-FGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 34444455665554432 3568899999999987 343 3443444 44555555555 899999999999
Q ss_pred HHHHHHH
Q 027961 202 QEKTLTR 208 (216)
Q Consensus 202 ~Afd~ai 208 (216)
+|++.+.
T Consensus 132 ~al~~~~ 138 (203)
T 3gw4_A 132 KSLVYAQ 138 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886543
No 54
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=81.90 E-value=15 Score=27.84 Aligned_cols=165 Identities=13% Similarity=0.089 Sum_probs=82.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHH
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~ 85 (216)
-+-+..+|.+..+.|+|++++.+++++++ . .+. +..-...+..+|-. .+....+...+....+..... ......
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~--~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~ 130 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALE-L--DSS-AATAYYGAGNVYVV-KEMYKEAKDMFEKALRAGMEN-GDLFYM 130 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCCS-HHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-c--CCc-chHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCC-HHHHHH
Confidence 34566778888888999999999988886 2 133 34444455555543 344455555554333222111 111111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 027961 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (216)
Q Consensus 86 ~i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (216)
...-|.. .--++-...++.++.+ -|. ... .+-..|..|.-. |+ .+.|...|++++..
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~--~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 188 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVEL-----NEN----DTE--ARFQFGMCLANE-----GM-----LDEALSQFAAVTEQ- 188 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHH-----CTT----CHH--HHHHHHHHHHHH-----TC-----CHHHHHHHHHHHHH-
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh-----CCc----cHH--HHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111111 1112223333333332 121 111 122233333221 11 24577778877654
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 165 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.|.+| ....+.+..++. .|+.++|+...+++++.
T Consensus 189 ----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 189 ----DPGHA---DAFYNAGVTYAY-KENREKALEMLDKAIDI 222 (243)
T ss_dssp ----CTTCH---HHHHHHHHHHHH-TTCTTHHHHHHHHHHHH
T ss_pred ----CcccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHcc
Confidence 33443 344556665555 79999999988888653
No 55
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=81.61 E-value=3.5 Score=35.40 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALT-DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~-~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|.++|++|+++... .....||-.+...-|.+.-|+. +|+.++|...-++|..
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 36689999999999865 3445678777777888888887 8999999877666654
No 56
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=81.25 E-value=22 Score=29.50 Aligned_cols=182 Identities=14% Similarity=0.045 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccC--CCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchh---
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSST--PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE--- 82 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~~~~--~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~--- 82 (216)
-+..++.+....|+|++++.++++.++... ++.+....=...+..+|- ..+....+...+....+-....++..
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 355788888889999999999988875210 001111122233333332 22333444444432211111011110
Q ss_pred --hHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhccc
Q 027961 83 --HVSLVKDYRSK-V-----------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKV 142 (216)
Q Consensus 83 --~~~~i~~yr~k-i-----------------~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~ 142 (216)
...+..-|... - -++-...+...+++.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 11111111111 1 234444555555554432 1222333344445555543321
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 143 GDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 143 ~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
.+.|...|++|+++.... +.++.......|.+..|+ -.|+.++|+...++|++.+-
T Consensus 239 -------~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHH
Confidence 346788888888887642 122222233444555444 47899999888888876554
No 57
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=80.60 E-value=5.7 Score=26.38 Aligned_cols=46 Identities=17% Similarity=0.167 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+...++|..
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5688899999864 45554 345677777776 8999999988877764
No 58
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=80.24 E-value=11 Score=27.49 Aligned_cols=45 Identities=7% Similarity=0.018 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 63 ~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 63 KAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 455555555443 23332 233444444444 5666666665555544
No 59
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=80.11 E-value=20 Score=28.33 Aligned_cols=56 Identities=13% Similarity=-0.060 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+++....-.+.+ |-......+.+..++. .|+.++|+...+++.+.
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 45688999999998754333222 3333455566666665 89999999998888754
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=80.04 E-value=20 Score=28.15 Aligned_cols=184 Identities=11% Similarity=0.059 Sum_probs=94.4
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCc--hh
Q 027961 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN--EE 82 (216)
Q Consensus 5 ~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~--~~ 82 (216)
+-+.+..+|...-+.|+|++++..+.+++. ..++.++..+=...+..+|-. .+....+...+....+....... ..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~-~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT-YGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG-GCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 456788899999999999999999999987 211122335566666666644 46666677766654443211111 11
Q ss_pred hHHHHHHHH---------HHHHHHHHHHHHHHHHHhhhccCCCCCCC-chHhHHhhhhccc---chhhhhc--ccchhHH
Q 027961 83 HVSLVKDYR---------SKVESELSDVCGSILKLLDSHLVPSATAG-ESKVFYLKMKGDY---YRYLAEF--KVGDERK 147 (216)
Q Consensus 83 ~~~~i~~yr---------~ki~~EL~~~c~eil~lid~~Lip~~~~~-eskvfy~KmkgDy---yRYlaE~--~~~~~~~ 147 (216)
...+..-|. ..--++-....+.++.+ -|..... ........+.+++ +-.++.+ ..|+
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~--- 163 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERREL--- 163 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---
Confidence 112222221 22223334444444332 2443221 1111111111110 0111111 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH---------hCCHHHHHHHHHHHHH
Q 027961 148 AAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI---------LNSSEKACTMAKQEKT 205 (216)
Q Consensus 148 ~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi---------~~~~~~A~~iAk~Afd 205 (216)
-+.|...|+++++ ..|.+|......++.+.-|+.. .|+.++|+...+++..
T Consensus 164 --~~~A~~~~~~~l~-----~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 164 --YEAAAVTYEAVFD-----AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp --HHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH-----HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 3567888888875 3466776666666666666652 2777888877776654
No 61
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=79.90 E-value=7.2 Score=32.42 Aligned_cols=56 Identities=9% Similarity=0.008 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+|++.+
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence 56889999999998765555567666666777877777 699999999988887654
No 62
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=79.88 E-value=19 Score=27.83 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=32.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
+-+..++.+..+.|+|++++..+.+++. . +|. +.+=...+..++-. .+....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--E-NPQ-DPEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-SSS-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4556667777777777777777777775 2 133 44445555555433 344444444443
No 63
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=79.73 E-value=18 Score=27.38 Aligned_cols=164 Identities=9% Similarity=0.024 Sum_probs=72.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~ 86 (216)
..+..+|...-+.|+|++++.+++++++ . .+-+.+-...+..+|-. .+....+...+....+..... .......
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~--~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~l 97 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE--E--NKEDAIPYINFANLLSS-VNELERALAFYDKALELDSSA-ATAYYGA 97 (243)
T ss_dssp ------------------CCTTHHHHHT--T--CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH--h--CcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCcc-hHHHHHH
Confidence 3456778888889999999999999987 2 23345555555555542 455556666655433322111 1111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027961 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (216)
Q Consensus 87 i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (216)
..-|.. .--++-...+..++++ -|.. ..+ +...|..|... |+ .+.|...|++++++
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~-----~~~~----~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRA-----GMEN----GDL--FYMLGTVLVKL-----EQ-----PKLALPYLQRAVEL-- 154 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----TCCS----HHH--HHHHHHHHHHT-----SC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHhccHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHh-----cc-----HHHHHHHHHHHHHh--
Confidence 122211 1112223333333332 1221 122 23344443321 11 35678888888764
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.|.+| ....+.+..++. .|+.++|+...+++...
T Consensus 155 ---~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 155 ---NENDT---EARFQFGMCLAN-EGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHH
T ss_pred ---CCccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 33343 244556666665 79999999988887654
No 64
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.36 E-value=6.3 Score=27.45 Aligned_cols=33 Identities=24% Similarity=0.093 Sum_probs=14.1
Q ss_pred CCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 027961 170 PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQE 203 (216)
Q Consensus 170 pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~A 203 (216)
|.+|....+..|.+..++. .++.++|+...+++
T Consensus 59 ~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~ 91 (148)
T 2dba_A 59 ATPQDQAVLHRNRAACHLK-LEDYDKAETEASKA 91 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHH
Confidence 3333333344444444333 44555544444444
No 65
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=79.01 E-value=18 Score=29.22 Aligned_cols=54 Identities=15% Similarity=0.029 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|+++.. +..++.... +..|.+++|++ +|+.++|+..-++|++.+
T Consensus 131 ~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 131 YEYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 3568899999987542 223333333 45566777776 899999999999998644
No 66
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=78.86 E-value=8.8 Score=24.39 Aligned_cols=48 Identities=17% Similarity=0.294 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+.+ .|.+| ....|.+..++. .|+.++|+...+++...
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 35688889888864 34444 345566766665 89999999888887653
No 67
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=78.79 E-value=26 Score=28.71 Aligned_cols=59 Identities=14% Similarity=0.221 Sum_probs=39.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
-+-+..++.+..+.|+|++++.+++++++ . +|. +.+-...+..+|.. .+....+...+.
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE-L--QPN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh-c--CCC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 34567888999999999999999999997 2 233 44555566666543 344445555554
No 68
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=78.77 E-value=13 Score=27.96 Aligned_cols=49 Identities=24% Similarity=0.167 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHh-hccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 20 ERYEEMVKFMDSLV-TSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 20 ery~Dm~~~mk~~~-~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
+|.|..++.+|.-+ .+.+ |++||.|-|.=|.--.|...-.-|-|+|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRT-GGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCC-SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887654 3234 6999999999999888888888888888774
No 69
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=78.43 E-value=29 Score=29.13 Aligned_cols=167 Identities=12% Similarity=0.069 Sum_probs=85.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHH
Q 027961 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (216)
Q Consensus 10 i~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~ 89 (216)
..+|....+.|+|++++.++.++++ . .+-+..-...+..+|-. .+....+...+....+..... ......+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~-~---~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE-V---CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH-H---CTTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-h---CCCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 4457778889999999999999987 2 23355556666666643 355555666665433322111 1111122222
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhh--------hcccchhhhhcccchhHHHHHHHHHHHHHHH
Q 027961 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKM--------KGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (216)
Q Consensus 90 yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (216)
|.. .--++-......++.+ -|.. ......+..+ .|+.+.- ..-.+.|...|+++
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEELIR----------DGRYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHHHHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHH
Confidence 211 1112222233333221 2221 1111111000 0221111 11245678888888
Q ss_pred HHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 161 QDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 161 ~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
++ +.|.+|.... +..+.+..+. -.|+.++|+...+++..
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHH
Confidence 75 3466775544 4445555554 48999999999988864
No 70
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=78.29 E-value=12 Score=25.60 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|+.++. +.|.+|......++.+..++. +|+.++|+..-+++..
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 567888888875 356777666666777777775 8999999988877764
No 71
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=77.83 E-value=8.6 Score=26.01 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
-+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|++.+
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhh
Confidence 35678888888864 345543 45566666665 899999999999887654
No 72
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=77.23 E-value=20 Score=26.56 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=38.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~ 70 (216)
+-+..++.+..+.|+|++++.+++++++ . .+. +.+-...++.+|-. .+....+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~--~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK-S--DPK-NELAWLVRAEIYQY-LKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH-h--Ccc-chHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 3456778888889999999999999887 2 133 34445555555543 3444555555543
No 73
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.17 E-value=24 Score=27.58 Aligned_cols=183 Identities=13% Similarity=0.105 Sum_probs=91.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhccC----CCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhh-hc--cCch
Q 027961 9 YVYLAKLAEQAERYEEMVKFMDSLVTSST----PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RKNE 81 (216)
Q Consensus 9 li~~Aklaeq~ery~Dm~~~mk~~~~~~~----~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~-~~--~~~~ 81 (216)
+..++.+....|+|++++.++++.+.... .+.+....-...++.+|-. .+....+...+....+.. .. ...+
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~ 150 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDHP 150 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 45788888899999999999999886210 0112222233334444322 334444544443322211 00 0011
Q ss_pred hhH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHH
Q 027961 82 EHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLS 156 (216)
Q Consensus 82 ~~~----~~i~~yr-~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 156 (216)
... .+..-|. ..=-++-.......+.+.....-+. ....+..+-..|..|...-. .+.|...
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~~ 217 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAETL 217 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHHH
Confidence 110 1111111 1112333444455555544432111 12223333334544433211 3567888
Q ss_pred HHHHHHHHhh-----------------------------------------cCCCCCchhHHHHHHHHHHHHHHhCCHHH
Q 027961 157 YKAAQDIALT-----------------------------------------DLAPTHPIRLGLALNFSVFYYEILNSSEK 195 (216)
Q Consensus 157 Y~~A~~~a~~-----------------------------------------~L~pt~pirLgL~LN~SVF~yEi~~~~~~ 195 (216)
|++|++++.. .....+|-......+.+..|.. .|+.++
T Consensus 218 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~ 296 (311)
T 3nf1_A 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEA 296 (311)
T ss_dssp HHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHH
Confidence 8888876533 1122567666777777777776 799999
Q ss_pred HHHHHHHHHHH
Q 027961 196 ACTMAKQEKTL 206 (216)
Q Consensus 196 A~~iAk~Afd~ 206 (216)
|+...++|++-
T Consensus 297 A~~~~~~al~l 307 (311)
T 3nf1_A 297 AETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998888764
No 74
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=77.13 E-value=9.4 Score=26.30 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
-+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 43 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 43 YRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688888888764 4555 3456777777776 79999999998888764
No 75
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=76.51 E-value=35 Score=29.02 Aligned_cols=173 Identities=10% Similarity=0.006 Sum_probs=81.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~ 86 (216)
+-+..++.+..+.|+|++++..++++++ . ++. +.+-...++.+|-. .+....+...+....+..... .......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~--~-~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKE--L-DPE-NIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEA-PEVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH--T-CSS-CSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTC-SHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH--h-Chh-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccC-HHHHHHH
Confidence 3455677777888888888888888876 2 243 23333334443322 344444555554333221111 1111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027961 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (216)
Q Consensus 87 i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (216)
..-|.. .--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+++
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 111111 11122233333333322 221111111112222333332100 012 245678888888764
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.|.+| ....+.+..+.. .|+.++|....++|++.
T Consensus 445 ---~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKLQ-QEDIDEAITLFEESADL 478 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 34444 334455555554 89999999988887653
No 76
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=76.14 E-value=25 Score=27.14 Aligned_cols=47 Identities=19% Similarity=0.159 Sum_probs=34.4
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn 56 (216)
-+-+..++.+..+.|++++++..++++++ . +|. +.+=...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~-~--~P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA-R--TPR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCC-cHHHHHHHHHHHHH
Confidence 34567889999999999999999999997 2 244 44555555555543
No 77
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=76.12 E-value=10 Score=24.63 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.++ ....+.+..++. .|+.++|+...+++..
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4577777777654 23332 344566666665 6888888877777654
No 78
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=75.98 E-value=17 Score=25.08 Aligned_cols=56 Identities=14% Similarity=0.053 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
-+.|...|++|++++... + .+|.......+.+..++. .|+.++|+...++|.+-+.
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 456889999999988642 2 234444455566666665 7999999999888877654
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=75.75 E-value=28 Score=27.68 Aligned_cols=168 Identities=13% Similarity=0.111 Sum_probs=88.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHH
Q 027961 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (216)
Q Consensus 10 i~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~ 89 (216)
..+|.+..+.|+|++++.+++++++ . .+-+.+-...++.+|-. .+....+...+....+..... ......+..-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~-~---~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE-V---CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH-H---CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH-h---CCCchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3457888999999999999999997 2 23355556666666544 355566666665433322111 1111122111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhh--------cccchhhhhcccchhHHHHHHHHHHHHHHH
Q 027961 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMK--------GDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (216)
Q Consensus 90 yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (216)
|.. .=.++-...+...+++ -|. ++....+|.++. |..+. ..| -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 211 1112222233333321 122 122222222211 22211 111 145678888888
Q ss_pred HHHHhhcCCCCCchhH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 161 QDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 161 ~~~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
++. .|.+|... .+..+.+..++. .|+.++|+...+++.+.
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 35566443 445566666665 89999999998888663
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=75.29 E-value=26 Score=26.98 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 176 LGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
....++.+..++. .|+.++|+...++|..
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4455666666665 7999999988887764
No 81
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=74.77 E-value=13 Score=24.35 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 5678888888753 4555431 45667777776 79999999888777653
No 82
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=74.70 E-value=33 Score=27.96 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|...
T Consensus 132 ~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 4566777777766643 1 12222 2334455555554 57777777666666554
No 83
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=74.24 E-value=7.2 Score=29.32 Aligned_cols=47 Identities=11% Similarity=-0.033 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|..+|++|+.+ .|.||. ...|.++.|.. +|+.++|+..-++|..
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45689999999854 566764 45677777775 8999999987777754
No 84
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=73.84 E-value=13 Score=29.06 Aligned_cols=54 Identities=15% Similarity=0.119 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhH-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRL-----GLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirL-----gL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|..+|++|+++.-. .|+..++.+ ....|-+.-+.. +|+.++|+.-..+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 46799999999998753 332233333 377788877776 8999999998887765
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=73.81 E-value=8.9 Score=26.22 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++.+.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 456777777764 357888666666777777776 79999999988887653
No 86
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=72.28 E-value=8.2 Score=26.63 Aligned_cols=50 Identities=12% Similarity=0.001 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 346778888875 334577777788888888887 79999999998888654
No 87
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=72.22 E-value=21 Score=24.54 Aligned_cols=53 Identities=15% Similarity=0.004 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
..|..-|++|+......-. ..+.+-.+..++++-+|. +|+.++|+...++|..
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHh
Confidence 4577788888877643211 123444556677777776 8999999999988874
No 88
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=71.42 E-value=15 Score=25.25 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=7.5
Q ss_pred hCCHHHHHHHHHHHHH
Q 027961 190 LNSSEKACTMAKQEKT 205 (216)
Q Consensus 190 ~~~~~~A~~iAk~Afd 205 (216)
+|+.++|+...++++.
T Consensus 85 ~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 85 VKEYASALETLDAART 100 (126)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHH
Confidence 4555555444444443
No 89
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=71.34 E-value=39 Score=27.29 Aligned_cols=27 Identities=7% Similarity=-0.124 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
-+-..+.+....|+|++++++..+.++
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~ 65 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAAD 65 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 355667788888999999999988876
No 90
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=71.17 E-value=14 Score=26.19 Aligned_cols=47 Identities=4% Similarity=-0.065 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688889998864 45554 345666666665 8999999888777754
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=71.02 E-value=36 Score=26.76 Aligned_cols=27 Identities=4% Similarity=-0.085 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
.++.+|...-+.|+|++++.+++++++
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~ 49 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQ 49 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345555555555666666666655554
No 92
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=71.00 E-value=53 Score=28.72 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|.+.|++++++... . +.+|-. .....+.+..|+ ..|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 46789999999887653 2 345554 334444444444 489999999999988754
No 93
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=70.83 E-value=40 Score=27.23 Aligned_cols=58 Identities=12% Similarity=0.003 Sum_probs=40.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~ 69 (216)
+.+..++....+.|+|++++.++.++++ . +|. +.+=...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--Q-DPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--S-CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 4578899999999999999999999997 2 233 45555666666543 344444444443
No 94
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=70.69 E-value=16 Score=24.55 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 5678888888764 34443 345666666665 79999999998888754
No 95
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=69.21 E-value=18 Score=24.91 Aligned_cols=26 Identities=15% Similarity=0.178 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 180 LNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.+..++. +|+.++|+...++|+..
T Consensus 81 ~~l~~~~~~-~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 81 FFLGQCQLE-MESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 344444443 45555555555555543
No 96
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=69.21 E-value=21 Score=23.72 Aligned_cols=50 Identities=18% Similarity=0.349 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++.+..-
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 35678888888764 24443 345666776666 7999999999998877643
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=68.36 E-value=19 Score=24.68 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDI 163 (216)
Q Consensus 151 ~~a~~aY~~A~~~ 163 (216)
+.|...|++|+++
T Consensus 55 ~~A~~~~~~al~~ 67 (126)
T 3upv_A 55 PEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4577777777754
No 98
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=68.16 E-value=22 Score=23.97 Aligned_cols=49 Identities=12% Similarity=-0.030 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++|+...
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 35688888888864 34443 344566666665 799999999888887644
No 99
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=67.92 E-value=17 Score=26.63 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|.+.|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 35688899998864 45554 334445555555 7899988888777654
No 100
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=67.56 E-value=8.1 Score=33.45 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++.... ....+|....+.+|.+..|+. +++.++|+...++|++
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888899888865431 111567778888899888886 7999999998888865
No 101
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=66.99 E-value=20 Score=23.30 Aligned_cols=46 Identities=13% Similarity=-0.065 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...+++.+
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALEF-LNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 4577888888764 34444 345666666655 8999999988877764
No 102
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=66.91 E-value=44 Score=26.21 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=24.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
-.-+..++.+..+.|+|++++.+++++++
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 83 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARM 83 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34566788889999999999999999987
No 103
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=66.73 E-value=28 Score=36.74 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=20.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 181 NFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 181 N~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.--|-+|+-.|..++||.+..+|..
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL~ 1308 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAALG 1308 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 3456788999999999999998843
No 104
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=66.34 E-value=52 Score=26.76 Aligned_cols=51 Identities=6% Similarity=-0.088 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEK 204 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (216)
-+.|...|++|+++.... +. +| ..+ ..+|... .|-.+|+.++|+..-+++.
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~-~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVL-VQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHH-HHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHH-HHHHcCCHHHHHHHHHHHh
Confidence 457899999999988642 22 22 333 3344444 4445799999988777664
No 105
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=65.60 E-value=21 Score=26.76 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p-------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45788888887643 3344 123566777777776 7999999988888765
No 106
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=65.56 E-value=25 Score=23.27 Aligned_cols=25 Identities=16% Similarity=0.080 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 180 LNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.+..++. +|+.++|+...++++.
T Consensus 84 ~~~~~~~~~-~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 84 GRMGLALSS-LNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence 444444443 5777777766666554
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=65.31 E-value=25 Score=23.23 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=9.4
Q ss_pred HHHHHHHhCCHHHHHHHHHHHh
Q 027961 12 LAKLAEQAERYEEMVKFMDSLV 33 (216)
Q Consensus 12 ~Aklaeq~ery~Dm~~~mk~~~ 33 (216)
++.+....|+|++++.++++++
T Consensus 18 ~~~~~~~~~~~~~A~~~~~~~~ 39 (131)
T 2vyi_A 18 EGNEQMKVENFEAAVHFYGKAI 39 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHH
Confidence 3344444444444444444443
No 108
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=64.97 E-value=19 Score=26.24 Aligned_cols=47 Identities=9% Similarity=0.009 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|..+|++|+.+ .|.||. ..+|.++.|.. +|+.++|+...++|..
T Consensus 71 ~~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 71 YDLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688999999864 466663 44677777776 8999999988777765
No 109
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=64.76 E-value=36 Score=24.45 Aligned_cols=46 Identities=7% Similarity=-0.178 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHh
Confidence 4677788888765 45554 345556666665 8999999988887764
No 110
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=64.46 E-value=42 Score=25.74 Aligned_cols=48 Identities=13% Similarity=0.002 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...+++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 34567777777654 33443 233444455554 78888888877777653
No 111
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=63.52 E-value=25 Score=24.71 Aligned_cols=46 Identities=7% Similarity=-0.170 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 3455555555543 22332 233344444443 5666666655555543
No 112
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=63.48 E-value=27 Score=22.59 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++.
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888754 34444 345556666665 79999999988888654
No 113
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=62.54 E-value=25 Score=25.48 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
++|.+.|++|+++ .|.||- ...|.+..|.. +|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYEL-EENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 4567777777653 445542 33444444444 6788777776665543
No 114
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=62.25 E-value=38 Score=23.84 Aligned_cols=164 Identities=16% Similarity=0.155 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHH
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i 87 (216)
-+..++....+.|+|++++..+++++. . .+. +..-...++.+|-. .+....+...+....+..... ........
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~-~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 83 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--A-DAF-DVDVALHLGIAYVK-TGAVDRGTELLERSLADAPDN-VKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--T-TSC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--h-Ccc-ChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCC-HHHHHHHH
Confidence 345678888889999999999998876 2 132 34444445554432 344455555554333221110 11111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027961 88 KDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (216)
Q Consensus 88 ~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (216)
.-|.. .=-++-....+.++.+ -|. ...+ +...|..|.-. |+ .+.|...|+++++.
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~--- 139 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEA-----NPI----NFNV--RFRLGVALDNL-----GR-----FDEAIDSFKIALGL--- 139 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----CTT----CHHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CcH----hHHH--HHHHHHHHHHc-----Cc-----HHHHHHHHHHHHhc---
Confidence 11211 1112222333333332 122 1122 22234333221 11 35678888888764
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.|.+| ....+.+..++. .|+.++|....+++.+..
T Consensus 140 --~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 140 --RPNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANELD 174 (186)
T ss_dssp --CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred --Cccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 24443 344555665555 799999999998887653
No 115
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=61.91 E-value=33 Score=23.40 Aligned_cols=11 Identities=9% Similarity=0.259 Sum_probs=5.8
Q ss_pred HHHHHHHHHHH
Q 027961 152 NTMLSYKAAQD 162 (216)
Q Consensus 152 ~a~~aY~~A~~ 162 (216)
.|...|++|+.
T Consensus 61 ~A~~~~~~al~ 71 (137)
T 3q49_B 61 QALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555555554
No 116
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=61.90 E-value=20 Score=27.91 Aligned_cols=55 Identities=11% Similarity=0.009 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhh--cCCCCCchhH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALT--DLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~--~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|..+|.+|+++-.. ++.|.++--+ .-..|-++-+.. +|+.++|+.--++|..-
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhc
Confidence 4688889999887322 4566655211 111344444444 89999999877776553
No 117
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=61.48 E-value=22 Score=29.21 Aligned_cols=69 Identities=17% Similarity=0.115 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhh----hhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|....|...-.-|.++|-+..--. +.+..+ .+-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888752111 111011 11134445666677777777666666554
No 118
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=61.46 E-value=30 Score=28.05 Aligned_cols=54 Identities=11% Similarity=-0.045 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
+.|..+|++|+++..+ +. +|...+.+++-.-..|.-+|++++|+...++|.+-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5689999999998763 32 455555555544444555899999999888887654
No 119
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.42 E-value=29 Score=23.82 Aligned_cols=48 Identities=10% Similarity=-0.063 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 81 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 81 YDKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 35678888888764 34453 344566666665 79999999888877653
No 120
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=61.35 E-value=19 Score=20.11 Aligned_cols=27 Identities=22% Similarity=0.446 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027961 85 SLVKDYRSKVESELSDVCGSILKLLDS 111 (216)
Q Consensus 85 ~~i~~yr~ki~~EL~~~c~eil~lid~ 111 (216)
+.+..||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 456889999999999999988777643
No 121
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=61.06 E-value=26 Score=24.87 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
-+.|..+|+.|+.+ .|.||. ..+|.+..++. +|+.++|+...+++...
T Consensus 68 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 68 YEQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688999998764 466664 34666776665 89999999988887654
No 122
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=60.53 E-value=31 Score=24.21 Aligned_cols=48 Identities=23% Similarity=0.160 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|++|+.+ .|.+ .....+.+..++. .|+.++|+...+++...
T Consensus 29 ~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 29 YENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35678888888764 2333 3455566666665 79999999998887654
No 123
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=59.90 E-value=59 Score=25.26 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHH--------------HHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLA--------------LNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~--------------LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
.+.|...|+++++. .|.+|...... ++.+..|+. .|+.++|+..-++++..
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Confidence 56788888888753 45666544333 677777776 79999999988887653
No 124
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=59.86 E-value=10 Score=31.94 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcC-------CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|...|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3567788888876542110 00134556777788877776 7888888888777754
No 125
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=59.69 E-value=33 Score=22.34 Aligned_cols=25 Identities=16% Similarity=0.260 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 180 LNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.+..++. .|+.++|....+++++
T Consensus 81 ~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 81 YNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 444444444 5666666666555544
No 126
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=59.62 E-value=53 Score=24.66 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=34.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l 68 (216)
+.+..++...-+.|+|++++.++.++++ . + -+.+=...++.+|-. .+....+...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~-~--~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWE-L--H--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--S--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH-h--h--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 5667788888888999999999988886 2 2 233444445554433 23333344443
No 127
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=59.47 E-value=54 Score=24.64 Aligned_cols=49 Identities=8% Similarity=0.020 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (216)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++|++..
T Consensus 189 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 189 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhC
Confidence 45678888888764 34444 344556666665 799999999988887654
No 128
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=59.36 E-value=31 Score=25.10 Aligned_cols=47 Identities=9% Similarity=-0.015 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHhh
Confidence 4578888888764 34554 445667777766 79999999988887653
No 129
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=58.94 E-value=30 Score=27.81 Aligned_cols=178 Identities=13% Similarity=0.065 Sum_probs=85.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH-----HhhhhhhHHHHHHHh-HhhhhhccCc
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYK-----NVIGSLRAAWRIISS-IEQKEEGRKN 80 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayK-----n~i~~~R~s~r~l~~-~eqk~~~~~~ 80 (216)
+.+...+...-..|+|+++++..++.++ . .+. ..+....+..-+. ...+..-.|...+.. ++........
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELK--K-EEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhc--c-ccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 3455667777788999999999998887 2 133 3333222211111 111233344444432 1111111111
Q ss_pred hhhH----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHH
Q 027961 81 EEHV----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (216)
Q Consensus 81 ~~~~----~~i~~yr~-ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (216)
.... .+..-|.. .=-++-....+..+++.+. .|. ++...+-.+-..|..|..+-+ -+.|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 0001 11111211 1123444555666655543 232 111111222234554432221 467899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHH-HHHHHHHHHHhCCHHHH-HHHHHHHHHH
Q 027961 156 SYKAAQDIALTDLAPTHPIRLGLA-LNFSVFYYEILNSSEKA-CTMAKQEKTL 206 (216)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL~-LN~SVF~yEi~~~~~~A-~~iAk~Afd~ 206 (216)
.|++|++++.. ..++..++.+ .|.+..|+ -+|+.++| ....++|..-
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~-~~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLR-KLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHH
Confidence 99999999853 2334445544 55555555 58999999 5545665543
No 130
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=58.69 E-value=35 Score=22.24 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=12.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 10 i~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
..++.+..+.|+|++++..+++++.
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~ 37 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALE 37 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3444445555555555555554443
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=58.58 E-value=20 Score=31.63 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhhcCC--------CCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLA--------PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~--------pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|...|++|+++.... + ..+|.+..+.+|.+..|+. +++.++|+....+|+.
T Consensus 284 ~~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 356888999998765321 1 0245677888999998887 8999999998888765
No 132
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=57.81 E-value=32 Score=25.58 Aligned_cols=47 Identities=9% Similarity=0.076 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++|++
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 35688899998865 24443 455677777776 8999999998888776
No 133
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.22 E-value=17 Score=24.43 Aligned_cols=47 Identities=21% Similarity=0.152 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|+. +.|.+ .....+.+..++. .++.++|+...++|...
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 457788888764 34444 3445666666655 79999999988887653
No 134
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=57.16 E-value=33 Score=25.60 Aligned_cols=46 Identities=9% Similarity=-0.040 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5678888888765 34443 445666776665 7999999988887764
No 135
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=55.74 E-value=35 Score=26.05 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=26.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
-+.++..+...-+.|+|++++.++.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46788899999999999999999999987
No 136
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=54.93 E-value=42 Score=23.58 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|.+.|++++.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhc
Confidence 4577888888764 33444 344556666655 79999999998888754
No 137
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=54.16 E-value=37 Score=27.26 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHh----hhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..-- .+.+..+ .+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874211 1111001 11234445566666666666666666544
No 138
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=53.51 E-value=30 Score=30.86 Aligned_cols=25 Identities=8% Similarity=-0.146 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 180 LNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.|.+..|+. +|+.++|+...++|..
T Consensus 78 ~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 78 YRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 344444443 4555555555554443
No 139
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=53.44 E-value=43 Score=24.83 Aligned_cols=47 Identities=6% Similarity=-0.017 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|...|++|+. +.|.||- ...|.++.|+. +|+.++|+..-++|+.
T Consensus 52 ~~eA~~~~~~al~-----~~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 52 IEEAEVFFRFLCI-----YDFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 3568888888875 4566664 34566666665 8999999987777643
No 140
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=52.69 E-value=49 Score=23.30 Aligned_cols=47 Identities=13% Similarity=-0.014 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+. +.|.+|. ...+.+..++. +|+.++|+...++|..
T Consensus 34 ~~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 34 WDDAQKIFQALCM-----LDHYDAR---YFLGLGACRQS-LGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCccHH---HHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 3567778887774 3556653 34556666665 8999999988887764
No 141
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=52.45 E-value=38 Score=27.15 Aligned_cols=69 Identities=17% Similarity=0.208 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHh----hhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..-- .+.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874211 1111011 01234445566666666666666666543
No 142
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=52.38 E-value=29 Score=28.12 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=27.1
Q ss_pred HHHHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 027961 156 SYKAAQDIALT--DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (216)
Q Consensus 156 aY~~A~~~a~~--~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (216)
-|++|....++ .+.|.++ ....|.+..|+. +|+.++|+...++|+...-
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCc
Confidence 34555555443 3344443 344455555554 6777777777777766543
No 143
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=51.55 E-value=40 Score=27.00 Aligned_cols=69 Identities=23% Similarity=0.183 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHh----hhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..-- .+.+..| .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874211 1111111 01234445566666666666666666543
No 144
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=51.45 E-value=52 Score=30.19 Aligned_cols=47 Identities=23% Similarity=0.386 Sum_probs=30.0
Q ss_pred hcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH------HHHHHH
Q 027961 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF------SVFYYE 188 (216)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~------SVF~yE 188 (216)
-||..||.... ..|...|.+|..+.=.+=.| --.||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~~--~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQP--YNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSHH--HHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCch--HHHHHHHHhcccccHHHHHHHH
Confidence 79999999763 57899999998653211111 1456655443 566663
No 145
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=50.24 E-value=80 Score=23.85 Aligned_cols=62 Identities=8% Similarity=-0.052 Sum_probs=41.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e 72 (216)
.+-+..+|.+..+.|+|++++.+++++++ . ++. +..-...+..+|-. .+....+.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~--~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA-S--DSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-H--CcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 34566788999999999999999999987 2 243 44555555555543 455556666665443
No 146
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=50.16 E-value=43 Score=26.79 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHh----hhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..-- .+.+..| .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874211 1111111 01133445556666666666666666543
No 147
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=50.01 E-value=83 Score=24.00 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eq 73 (216)
+.+..+|...-+.|+|++++..+++++... ++.+...+-...+..+|-. .+....+...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 456778889999999999999999999721 1123334555555655533 4555666666655443
No 148
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=49.87 E-value=31 Score=24.06 Aligned_cols=47 Identities=9% Similarity=0.042 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|..+|++|+++ .|.+|- ...+.++.+.. .|+.++|+...++++.
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688999998764 456653 44566666665 7999999888777654
No 149
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=49.76 E-value=45 Score=25.78 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=41.7
Q ss_pred hcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHHHHH----HHHhCCHHHHHHHHHH
Q 027961 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMAKQ 202 (216)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yEi~~~~~~A~~iAk~ 202 (216)
.|..+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++.-++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~k 116 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQ 116 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHH
Confidence 4555555666667777677789999999999864 45555 3455554321111 1112466777765554
Q ss_pred HH
Q 027961 203 EK 204 (216)
Q Consensus 203 Af 204 (216)
|+
T Consensus 117 Al 118 (158)
T 1zu2_A 117 AV 118 (158)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 150
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=49.75 E-value=58 Score=26.05 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..--.+.-.+ .. +.-++-.++.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEE-LE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999888888888874211111000 00 02244555666777777777777776654
No 151
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=49.60 E-value=56 Score=23.57 Aligned_cols=46 Identities=11% Similarity=-0.004 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+. +.|.+|.- ..|.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457777877764 45666643 3566666665 8999999998888764
No 152
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=48.81 E-value=38 Score=27.15 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027961 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (216)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~yr~ki~~EL~~~c~eil~lid~~L 113 (216)
|+||.|-|.=|.--.|...-.-|.++|-+..--.+.- +.-.....+-++-.++.++|+..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111000 000000011234445666777777777666666544
No 153
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=47.99 E-value=30 Score=25.08 Aligned_cols=47 Identities=15% Similarity=0.125 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.++|..+|+.|.. .+|.+| ...++.+..|++ +|+.++|+...++|+.
T Consensus 13 ~e~ai~~~~~a~~-----~~p~~~---~~~~~la~~y~~-~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 13 VERYIASVQGSTP-----SPRQKS---IKGFYFAKLYYE-AKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHHHHHSC-----SHHHHH---TTHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-----cCcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4556666666642 333333 345677788887 7999999988877754
No 154
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=47.13 E-value=79 Score=24.14 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|+++++ ..|.+|..-...++.+..|+. .|+.++|+...+++.+
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 557777777764 356777655556666666665 8999999988777654
No 155
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=46.78 E-value=69 Score=22.14 Aligned_cols=47 Identities=11% Similarity=0.079 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+.+ .|.|| ....+.++.+.. +|+.++|+...++|..
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35678888888753 44554 334555666665 7999999988777654
No 156
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=45.31 E-value=61 Score=21.10 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=14.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 10 i~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
..++....+.|+++++...+++++.
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 3445555556666666666665554
No 157
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=44.21 E-value=93 Score=22.87 Aligned_cols=55 Identities=11% Similarity=-0.010 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|..
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3567888998886532110 00334555667788887776 7999999988777754
No 158
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=43.18 E-value=1.4e+02 Score=24.47 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=19.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+-+..++.+..+.|+|++++.++++++.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455667777777777777777777765
No 159
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.60 E-value=39 Score=23.10 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=20.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
.-++.++.++.+.|+|++++.+..++.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4556777777777777777777777776
No 160
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=42.38 E-value=61 Score=24.44 Aligned_cols=47 Identities=6% Similarity=0.000 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
-+.|...|++|++ +.|. ......+.+..|+. +|+.++|+...++|+.
T Consensus 58 ~~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 58 YKEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 3567888888874 3444 34556667776666 7999999998888765
No 161
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=39.61 E-value=74 Score=26.50 Aligned_cols=46 Identities=11% Similarity=-0.059 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4578888888764 34444 334566666665 7888888877777654
No 162
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=39.56 E-value=47 Score=29.25 Aligned_cols=54 Identities=6% Similarity=-0.120 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSP 212 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~ 212 (216)
.+.|...|+.|+.. .| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..++
T Consensus 62 ~~~a~~~~~ral~~-----~p----~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~g 115 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK-----VL----HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIG 115 (530)
T ss_dssp HHHHHHHHHHHTTT-----CC----CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc-----CC----ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHCC
Confidence 45678888888642 23 24478888888899999999999999999999987543
No 163
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=38.54 E-value=1.3e+02 Score=27.95 Aligned_cols=65 Identities=18% Similarity=-0.005 Sum_probs=42.8
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH-------------hCCHHHHHHHHHHH
Q 027961 138 AEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI-------------LNSSEKACTMAKQE 203 (216)
Q Consensus 138 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi-------------~~~~~~A~~iAk~A 203 (216)
+|...++.-.+.+++|.++|+.|++..++--..-+|--.-..||-| -.||. .|.-+.|-.++++|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~a-k~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A 513 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAA-KKHEMAGDYYVNAARKALNGDLEQAKIDAEKA 513 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHh-hhhhhccHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 5666777777889999999999999997433344444333444433 33665 45666676666665
No 164
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=38.05 E-value=33 Score=28.84 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +++.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45778888887653 2333 122467888888876 7999999998888864
No 165
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=37.13 E-value=2.1e+02 Score=24.92 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=36.6
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV 57 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~ 57 (216)
-+-+..++.+..+.|+|++++.+++++++ . +|. ..-...++.+|...
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~--~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALT--H-CKN--KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-CCC--HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh--h-CCC--HHHHHHHHHHHHHh
Confidence 34567889999999999999999999997 3 365 56667777777654
No 166
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=36.92 E-value=69 Score=30.52 Aligned_cols=22 Identities=9% Similarity=0.069 Sum_probs=9.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHH
Q 027961 181 NFSVFYYEILNSSEKACTMAKQE 203 (216)
Q Consensus 181 N~SVF~yEi~~~~~~A~~iAk~A 203 (216)
|.+..|++ +|+.++|+...++|
T Consensus 116 ~Lg~~~~~-~g~~~eAi~~~~~A 137 (723)
T 4gyw_A 116 NLASIHKD-SGNIPEAIASYRTA 137 (723)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHH
Confidence 33333333 44444444444333
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=36.66 E-value=62 Score=28.73 Aligned_cols=9 Identities=22% Similarity=0.143 Sum_probs=2.6
Q ss_pred CCHHHHHHH
Q 027961 191 NSSEKACTM 199 (216)
Q Consensus 191 ~~~~~A~~i 199 (216)
++.++|+..
T Consensus 124 g~~~~A~~~ 132 (477)
T 1wao_1 124 KAFERAIAG 132 (477)
T ss_dssp HHHCCC---
T ss_pred HHHHHHhcc
Confidence 444444443
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=36.52 E-value=92 Score=20.63 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=41.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~ 70 (216)
-.-+..++.+..+.|+|++++.++++++. . +|. +.+=...+..+|.. .+....+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD-F--DPT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH-H--CCC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34567789999999999999999999997 2 243 34555666777654 3555555555543
No 169
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=36.46 E-value=67 Score=23.30 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhh----------------hhhHHHHHHHh
Q 027961 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIISS 70 (216)
Q Consensus 20 ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~----------------~~R~s~r~l~~ 70 (216)
++|+.+++.++.+-. .+...++.+++-.|-.-||.... .+..||..+..
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g 74 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGK 74 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcC
Confidence 568888999988653 11136899999988888988753 25677777643
No 170
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=33.93 E-value=33 Score=24.53 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=35.7
Q ss_pred hHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH----HHHHHHHHHH
Q 027961 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFYY 187 (216)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~y 187 (216)
+.+|+ .|+.--||-.+...-+ .-+....+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 6 ~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 6 TPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44554 3454456655543321 12445566677777543 36899999998 6667877753
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=32.39 E-value=1.1e+02 Score=20.14 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=39.5
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHH
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l 68 (216)
-.-+..++.+..+.|+|++++.+++++++ . +|.. ..=...+..+|.. .+..-.+...+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE-T--DPDY-VGTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--STTC-THHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCCc-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34567889999999999999999999997 2 2553 3345566666644 34444444444
No 172
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=32.27 E-value=1e+02 Score=22.07 Aligned_cols=49 Identities=16% Similarity=0.269 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHH
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQEKTL 206 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~--~~A~~iAk~Afd~ 206 (216)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...+++...
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 356888999998754 4454 24456666645457887 9999888777653
No 173
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=31.77 E-value=1.6e+02 Score=23.57 Aligned_cols=14 Identities=14% Similarity=0.297 Sum_probs=6.2
Q ss_pred hCCHHHHHHHHHHH
Q 027961 190 LNSSEKACTMAKQE 203 (216)
Q Consensus 190 ~~~~~~A~~iAk~A 203 (216)
+|+.++|+...++|
T Consensus 51 ~~~~~~A~~~~~~a 64 (281)
T 2c2l_A 51 MQQPEQALADCRRA 64 (281)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHH
Confidence 34444444444433
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=30.66 E-value=1.5e+02 Score=21.27 Aligned_cols=57 Identities=7% Similarity=-0.102 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRL 209 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (216)
.+.|...|++|+.++.. . .+|...+.+++.-...|.-.|++++|+...++|++-+..
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 45689999999998763 2 244445554444334444589999999999998876654
No 175
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=28.27 E-value=1.3e+02 Score=26.65 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ +|-......|.+..|+. +|+.++|+...++|++
T Consensus 74 ~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 74 AEAAVLLQQASDA--------APEHPGIALWLGHALED-AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 176
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=28.17 E-value=2.4e+02 Score=22.93 Aligned_cols=111 Identities=18% Similarity=0.282 Sum_probs=61.5
Q ss_pred HHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHHHH
Q 027961 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYR 91 (216)
Q Consensus 12 ~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~yr 91 (216)
.|+|.+....|-.|++-+|.-.. +..|..|.=.-||=-+.. +|.+. + .++++..=+..-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~--K-dSeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN--K-DQERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT--C-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc--c-hHHHHHHhHHHh
Confidence 57778887778778877765332 123556666666654443 33221 1 112222212222
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027961 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (216)
Q Consensus 92 ~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (216)
.+-+.--..+|-|+|+-.++ +-|.|+|.++|..+.- =...--|-.|++.|..
T Consensus 159 ssAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasav------wstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASAV------WSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHhcC
Confidence 33344555678777776654 4577888888865531 1234457788887753
No 177
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=27.59 E-value=1.6e+02 Score=20.76 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 9 li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+..++.+..+.|+|++++.++.++++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33444444445555555555555444
No 178
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=27.41 E-value=1.6e+02 Score=23.84 Aligned_cols=46 Identities=9% Similarity=-0.007 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|+++++. .|.+| .+..|.++.+.. +|+.++|...-++|+.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~~~-~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACHMA-QGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3455555555532 33443 344455555554 7888888887777764
No 179
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=27.27 E-value=1.5e+02 Score=22.94 Aligned_cols=16 Identities=13% Similarity=0.071 Sum_probs=9.3
Q ss_pred hCCHHHHHHHHHHHHH
Q 027961 190 LNSSEKACTMAKQEKT 205 (216)
Q Consensus 190 ~~~~~~A~~iAk~Afd 205 (216)
.++.++|+...++|.+
T Consensus 55 ~~~~~~A~~~~~~a~~ 70 (273)
T 1ouv_A 55 EKNLKKAASFYAKACD 70 (273)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5666666666555543
No 180
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=25.87 E-value=87 Score=21.45 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+++..|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555556788999998888877765
No 181
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=25.58 E-value=1.2e+02 Score=25.91 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (216)
+.|...|++|++ +.|.+| ....+.+..|+. +++.++|+...++|++.
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQG-LKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 457777887774 445554 334555665555 89999999888887653
No 182
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=25.14 E-value=1.4e+02 Score=19.04 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 6 r~~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
-+.+..++......|+|++++....+++.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45677888899999999999999999997
No 183
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=23.32 E-value=3e+02 Score=22.28 Aligned_cols=16 Identities=6% Similarity=-0.022 Sum_probs=8.7
Q ss_pred hCCHHHHHHHHHHHHH
Q 027961 190 LNSSEKACTMAKQEKT 205 (216)
Q Consensus 190 ~~~~~~A~~iAk~Afd 205 (216)
.++.++|+...++|+.
T Consensus 216 ~~~~~~A~~~~~~al~ 231 (388)
T 1w3b_A 216 ARIFDRAVAAYLRALS 231 (388)
T ss_dssp TTCTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 5666666555554443
No 184
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=23.21 E-value=2.2e+02 Score=20.92 Aligned_cols=67 Identities=22% Similarity=0.214 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHHHHHHHHH-H----HHHHHHHHHHHhhhccCCCCC-CC
Q 027961 47 RNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVES-E----LSDVCGSILKLLDSHLVPSAT-AG 120 (216)
Q Consensus 47 RnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~yr~ki~~-E----L~~~c~eil~lid~~Lip~~~-~~ 120 (216)
-+++|+||+. ++.+.++.-.+.|..+-+++.+ + ...+|.-.-..|-++++-+.. -|
T Consensus 9 ~~~lS~AY~D------------------peVk~~p~Lr~~lf~~Ak~L~~~~d~~~y~~V~~KLs~~IS~Y~l~hh~~~P 70 (111)
T 1tdp_A 9 YLNLSEAYKD------------------PEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIP 70 (111)
T ss_dssp HHHHHHHHTC------------------HHHHSCHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCTTSCCCCC
T ss_pred HHHHHHHhCC------------------HhhhcCHHHHHHHHHHHHHhccCCCcchhHhHHHHHHhHHHHHHHHhcccCc
Confidence 3577888876 2223345555666666666654 3 566777777777777766544 34
Q ss_pred ch-HhHHhhhhc
Q 027961 121 ES-KVFYLKMKG 131 (216)
Q Consensus 121 es-kvfy~Kmkg 131 (216)
++ ...|...+.
T Consensus 71 ~ali~L~~~I~k 82 (111)
T 1tdp_A 71 SSMLTIYTQIQK 82 (111)
T ss_dssp GGGTHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 43 334555554
No 185
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=22.69 E-value=77 Score=24.31 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccch--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 027961 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGD--ERKAAAENTMLSYKAAQDIALTDLAPTHP 173 (216)
Q Consensus 96 ~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~~a~~~L~pt~p 173 (216)
.+|..-...+.+.|...+ .+.+|+++-|.-+|.+-+---.++...|. +..++.. ..+.|+.-.+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 345555555666777776 66689999999998877655555544442 2222222 236776555555555544444
No 186
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=22.18 E-value=1.1e+02 Score=20.73 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 8 ~li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+++..|=-.+++|+|++++.+.+..++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 355556556778888888888777665
No 187
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=21.69 E-value=4.8e+02 Score=24.10 Aligned_cols=73 Identities=19% Similarity=0.421 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCHH---HHHHHHH---HHHHhhhhhhHHHHHHHhHhhhhhccCchhhHHHHHHHHHH
Q 027961 20 ERYEEMVKFMDSLVTSSTPATELTVE---ERNLLSV---AYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSK 93 (216)
Q Consensus 20 ery~Dm~~~mk~~~~~~~~~~~Ls~e---ERnLlsv---ayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~~~~i~~yr~k 93 (216)
++|.+-++-+++++... .....+ |-.+|-. +|..++..-+..+..|..--+++....+.+...+++.||.+
T Consensus 121 ~k~g~~l~~v~~~~~~~---~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k 197 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGE---ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDK 197 (526)
T ss_pred HHHHHHHHHHHHHHHHh---hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 55666677777776411 334443 4445544 45667777788888887777787666566667888888887
Q ss_pred HH
Q 027961 94 VE 95 (216)
Q Consensus 94 i~ 95 (216)
+.
T Consensus 198 ~~ 199 (526)
T 3iyk_A 198 ID 199 (526)
T ss_pred HH
Confidence 64
No 188
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=21.46 E-value=1.9e+02 Score=25.11 Aligned_cols=46 Identities=9% Similarity=-0.095 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.++ ....|.+..|+. +++.++|+...++|+.
T Consensus 334 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 334 TKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4577888888764 34443 334555665555 7888888877766653
No 189
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=21.15 E-value=1.6e+02 Score=18.38 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027961 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (216)
Q Consensus 9 li~~Aklaeq~ery~Dm~~~mk~~~~ 34 (216)
+..++.+..+.|+|++++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455555556666666666666654
No 190
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=20.94 E-value=1.6e+02 Score=24.46 Aligned_cols=46 Identities=9% Similarity=0.030 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027961 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (216)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (216)
+.|...|++|+++ .|.|+ ....|.+.-|+. +|+.++|+...++|+.
T Consensus 247 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~a~~~-~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 247 DEAIGHCNIVLTE-----EEKNP---KALFRRGKAKAE-LGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHT-TTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4578888888764 34454 344566666655 7999999888877754
No 191
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=20.71 E-value=66 Score=27.66 Aligned_cols=42 Identities=26% Similarity=0.353 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCC
Q 027961 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNS 192 (216)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~ 192 (216)
-++.++|-++|+.+|...+.|.-++-|= -+||..+||||- |+
T Consensus 211 ~krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~-g~ 253 (298)
T 2r17_C 211 GKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEK-EN 253 (298)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTT-TC
T ss_pred hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhC-CC
Confidence 4578999999999999887755444333 379999999995 54
No 192
>2h9r_C 22-MER from A-kinase anchor protein 5; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix, protein-peptide complex; NMR {Rattus norvegicus}
Probab=20.23 E-value=1e+02 Score=16.30 Aligned_cols=21 Identities=19% Similarity=0.094 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 027961 193 SEKACTMAKQEKTLTRLVSPF 213 (216)
Q Consensus 193 ~~~A~~iAk~Afd~ai~~~~~ 213 (216)
.+.|-.+.|.|++.+|+++-.
T Consensus 3 ietasslvknaiqlsieqlv~ 23 (26)
T 2h9r_C 3 IETASSLVKNAIQLSIEQLVX 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHTTTC-
T ss_pred hhHHHHHHHHHHHHhHHHHHh
Confidence 356888999999999998754
No 193
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=20.07 E-value=4.1e+02 Score=22.62 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=38.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhh-hhHHHHHHH
Q 027961 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS-LRAAWRIIS 69 (216)
Q Consensus 7 ~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~-~R~s~r~l~ 69 (216)
+-+.+++.+..+.|+|++++....+++. . +|. +.+=.+.+..++... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~-l--~P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIE-L--NAA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHH-h--Ccc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 4456788888889999999999999997 2 244 444455555555443 32 444554443
Done!