Query 027962
Match_columns 216
No_of_seqs 104 out of 1131
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 100.0 3.5E-27 1.2E-31 192.5 18.0 181 10-214 66-277 (315)
2 3ii7_A Kelch-like protein 7; p 100.0 9.2E-27 3.1E-31 189.1 19.9 173 8-213 67-271 (306)
3 3ii7_A Kelch-like protein 7; p 100.0 6.1E-27 2.1E-31 190.2 18.7 169 10-213 23-224 (306)
4 2woz_A Kelch repeat and BTB do 99.9 1E-26 3.5E-31 190.0 18.7 181 10-214 77-287 (318)
5 2xn4_A Kelch-like protein 2; s 99.9 2.6E-26 8.8E-31 186.1 19.1 172 8-213 74-275 (302)
6 2xn4_A Kelch-like protein 2; s 99.9 3.3E-26 1.1E-30 185.5 19.5 172 7-213 26-228 (302)
7 1zgk_A Kelch-like ECH-associat 99.9 3E-26 1E-30 186.6 18.2 173 7-213 35-239 (308)
8 1zgk_A Kelch-like ECH-associat 99.9 5E-26 1.7E-30 185.2 19.5 171 8-213 87-286 (308)
9 2vpj_A Kelch-like protein 12; 99.9 9.9E-26 3.4E-30 182.5 19.6 171 8-213 75-277 (301)
10 2vpj_A Kelch-like protein 12; 99.9 1.4E-25 4.7E-30 181.6 19.8 172 7-213 27-230 (301)
11 4asc_A Kelch repeat and BTB do 99.9 1.3E-25 4.6E-30 183.1 15.6 171 11-213 13-220 (315)
12 2zwa_A Leucine carboxyl methyl 99.9 2.2E-24 7.6E-29 193.5 19.3 163 8-214 409-577 (695)
13 2woz_A Kelch repeat and BTB do 99.9 1.8E-24 6.3E-29 176.6 13.8 170 12-213 25-230 (318)
14 2uvk_A YJHT; unknown function, 99.9 2.6E-24 9E-29 178.1 14.3 176 8-214 83-342 (357)
15 2uvk_A YJHT; unknown function, 99.9 3.4E-23 1.2E-27 171.5 17.9 153 10-212 30-224 (357)
16 2zwa_A Leucine carboxyl methyl 99.9 2.7E-22 9.2E-27 180.0 17.4 165 9-213 466-634 (695)
17 1k3i_A Galactose oxidase precu 99.8 1.4E-17 4.9E-22 148.4 19.4 178 9-213 217-496 (656)
18 1k3i_A Galactose oxidase precu 99.7 1E-16 3.5E-21 142.9 11.1 147 13-213 168-322 (656)
19 3dsm_A Uncharacterized protein 90.8 5 0.00017 31.6 14.5 96 11-134 152-253 (328)
20 3mbr_X Glutamine cyclotransfer 86.1 9.8 0.00034 29.2 12.9 92 11-135 43-134 (243)
21 1kv9_A Type II quinohemoprotei 83.1 19 0.00066 31.6 12.4 77 43-135 61-137 (668)
22 1yiq_A Quinohemoprotein alcoho 80.7 30 0.001 30.6 13.7 77 43-135 65-141 (689)
23 3nol_A Glutamine cyclotransfer 78.8 21 0.00071 27.7 12.6 91 11-135 65-156 (262)
24 3dsm_A Uncharacterized protein 77.4 24 0.00081 27.6 13.8 102 11-134 105-212 (328)
25 1kb0_A Quinohemoprotein alcoho 76.9 39 0.0013 29.8 12.7 77 43-135 72-148 (677)
26 1kb0_A Quinohemoprotein alcoho 69.9 58 0.002 28.7 16.0 106 11-135 87-200 (677)
27 3ju4_A Endo-N-acetylneuraminid 66.5 58 0.002 27.4 18.3 41 13-56 260-300 (670)
28 2ad6_A Methanol dehydrogenase 65.2 66 0.0023 27.6 13.0 78 43-135 57-135 (571)
29 1kv9_A Type II quinohemoprotei 64.9 72 0.0025 27.9 11.7 106 11-135 76-188 (668)
30 4d9s_A UVB-resistance protein 62.5 62 0.0021 26.3 10.1 18 40-57 182-199 (406)
31 1yiq_A Quinohemoprotein alcoho 58.7 96 0.0033 27.3 13.2 106 11-135 80-193 (689)
32 4d9s_A UVB-resistance protein 57.9 75 0.0025 25.8 9.6 18 40-57 234-251 (406)
33 2ad6_A Methanol dehydrogenase 56.4 96 0.0033 26.6 16.0 106 11-135 73-186 (571)
34 3q7m_A Lipoprotein YFGL, BAMB; 56.3 71 0.0024 25.0 14.1 96 11-135 63-163 (376)
35 3mbr_X Glutamine cyclotransfer 54.7 68 0.0023 24.4 12.8 70 43-134 25-94 (243)
36 2dg1_A DRP35, lactonase; beta 51.3 78 0.0027 24.1 12.6 105 11-133 66-170 (333)
37 3nok_A Glutaminyl cyclase; bet 51.2 55 0.0019 25.4 7.1 90 12-135 76-165 (268)
38 1flg_A Protein (quinoprotein e 50.5 1.2E+02 0.0042 26.0 12.9 75 43-135 63-137 (582)
39 3nok_A Glutaminyl cyclase; bet 46.2 1E+02 0.0035 23.9 9.7 62 49-134 64-125 (268)
40 2hqs_A Protein TOLB; TOLB, PAL 43.9 1.2E+02 0.0043 24.3 13.3 96 11-133 247-343 (415)
41 3bws_A Protein LP49; two-domai 42.9 1.2E+02 0.0042 23.9 12.9 97 11-133 234-333 (433)
42 3c5m_A Oligogalacturonate lyas 42.9 1.1E+02 0.0039 23.6 10.6 62 11-83 168-231 (396)
43 3nol_A Glutamine cyclotransfer 42.8 1.1E+02 0.0039 23.5 10.7 66 49-135 52-117 (262)
44 3hx6_A Type 4 fimbrial biogene 42.4 1.7E+02 0.0058 25.4 17.0 69 12-81 165-238 (570)
45 3hfq_A Uncharacterized protein 41.7 90 0.0031 23.9 7.3 68 52-133 4-71 (347)
46 2iwa_A Glutamine cyclotransfer 41.4 1.2E+02 0.004 23.3 10.8 92 11-135 44-136 (266)
47 2iwa_A Glutamine cyclotransfer 40.6 1.2E+02 0.0042 23.2 12.4 72 42-134 24-95 (266)
48 3bws_A Protein LP49; two-domai 40.6 1.3E+02 0.0046 23.7 11.6 98 12-134 102-200 (433)
49 2hz6_A Endoplasmic reticulum t 40.0 62 0.0021 25.8 6.1 34 43-83 3-36 (369)
50 1flg_A Protein (quinoprotein e 39.1 1.9E+02 0.0063 24.9 9.9 59 11-83 466-524 (582)
51 1w6s_A Methanol dehydrogenase 37.0 2.1E+02 0.0071 24.8 14.3 106 11-135 73-192 (599)
52 3v9f_A Two-component system se 33.3 2.5E+02 0.0086 24.7 12.3 93 12-133 516-610 (781)
53 3vgz_A Uncharacterized protein 31.9 1.6E+02 0.0056 22.1 12.9 67 50-134 53-120 (353)
54 3c5m_A Oligogalacturonate lyas 31.1 1.8E+02 0.0062 22.4 12.9 101 11-133 216-328 (396)
55 1k8k_C P40, ARP2/3 complex 41 30.6 1.8E+02 0.0061 22.1 10.0 64 48-133 18-82 (372)
56 3scy_A Hypothetical bacterial 28.1 2E+02 0.0069 22.0 7.9 105 49-186 12-116 (361)
57 3azo_A Aminopeptidase; POP fam 27.9 2.8E+02 0.0095 23.5 13.1 104 11-133 217-324 (662)
58 3q7m_A Lipoprotein YFGL, BAMB; 27.2 2.2E+02 0.0075 22.1 14.7 33 43-83 48-80 (376)
59 1k8k_C P40, ARP2/3 complex 41 27.1 2.1E+02 0.007 21.7 11.4 98 11-134 30-127 (372)
60 2z3z_A Dipeptidyl aminopeptida 26.9 3E+02 0.01 23.5 14.3 107 10-133 234-343 (706)
61 3kci_A Probable E3 ubiquitin-p 25.8 2.5E+02 0.0087 22.3 9.5 17 41-57 223-239 (389)
62 2ovr_B FBW7, F-BOX/WD repeat p 25.6 2.5E+02 0.0086 22.3 16.3 21 107-133 370-390 (445)
63 3vgz_A Uncharacterized protein 23.2 2.4E+02 0.0082 21.2 15.2 93 11-133 206-302 (353)
64 3v9f_A Two-component system se 23.1 2.5E+02 0.0085 24.7 7.6 56 14-84 562-618 (781)
65 3of7_A Regulator of chromosome 23.1 2.2E+02 0.0076 23.5 6.9 18 40-57 157-174 (473)
66 1w6s_A Methanol dehydrogenase 23.0 3.7E+02 0.013 23.2 10.0 59 11-83 453-511 (599)
67 3no2_A Uncharacterized protein 22.6 2.5E+02 0.0084 21.1 8.5 83 11-115 146-230 (276)
68 2mad_H Methylamine dehydrogena 22.0 3E+02 0.01 21.8 8.1 67 50-133 279-349 (373)
69 2xdw_A Prolyl endopeptidase; a 21.7 3.9E+02 0.013 23.1 12.6 74 48-134 134-217 (710)
70 1ri6_A Putative isomerase YBHE 21.6 2.5E+02 0.0087 20.8 9.8 62 10-83 14-77 (343)
71 3no2_A Uncharacterized protein 21.5 2.6E+02 0.0089 20.9 12.5 98 46-186 132-230 (276)
72 3dwl_C Actin-related protein 2 21.4 2.7E+02 0.0094 21.2 6.9 64 49-134 22-86 (377)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=192.51 Aligned_cols=181 Identities=20% Similarity=0.244 Sum_probs=148.3
Q ss_pred cccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCC--CCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 10 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRG--VGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 10 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
.+++++||+.++ +|+++ .++|.+|.+|+++.+ +++||++||.. ......+++++||+.+ ++|+++
T Consensus 66 ~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~--~~W~~~---- 132 (315)
T 4asc_A 66 SAYFLQFDHLDS----EWLGM--PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLS--FKWGES---- 132 (315)
T ss_dssp EEEEEEEETTTT----EEEEC--CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTT--TEEEEC----
T ss_pred ccceEEecCCCC----eEEEC--CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCC--CcEeEC----
Confidence 567999999997 99988 468899999999999 58999999974 2356789999999999 999999
Q ss_pred CCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c-----------------------
Q 027962 88 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S----------------------- 143 (216)
Q Consensus 88 ~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+......+++++||+.+.+|...+. +
T Consensus 133 ----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 133 ----DPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp ----CCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECS
T ss_pred ----CCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCC
Confidence 67999999999999 999999999996566778999999999999984431 1
Q ss_pred -----cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeeccc
Q 027962 144 -----MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 214 (216)
Q Consensus 144 -----~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~~ 214 (216)
.+.+||+.+++|+.+... |.+|..|++++ .+++|||+||........ ........+++++||+..
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~-~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAF---PQERSSLSLVS--LVGTLYAIGGFATLETES-GELVPTELNDIWRYNEEE 277 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEEEEEEEEECTT-SCEEEEEEEEEEEEETTT
T ss_pred CCccceEEEEECCCCeEEECCCC---CCcccceeEEE--ECCEEEEECCccccCcCC-ccccccccCcEEEecCCC
Confidence 178999999999999754 78999998888 488999999985321111 111122568999999863
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.95 E-value=9.2e-27 Score=189.11 Aligned_cols=173 Identities=17% Similarity=0.217 Sum_probs=146.4
Q ss_pred cccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 8 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
..++++++||+.++ +|++++ ++|.+|.+|+++.+ +++||++||.......++++++||+.+ ++|+.+
T Consensus 67 ~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W~~~---- 133 (306)
T 3ii7_A 67 FPIKRMDCYNVVKD----SWYSKL--GPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRT--ESWHTK---- 133 (306)
T ss_dssp SBCCEEEEEETTTT----EEEEEE--CCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTT--TEEEEE----
T ss_pred CCcceEEEEeCCCC----eEEECC--CCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCC--CceEeC----
Confidence 45899999999997 999984 68899999999999 689999999964666789999999999 999999
Q ss_pred CCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCC---CCceEEEecCCCCcccccc-c--------------------
Q 027962 88 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR---KDDFWVLDTKAIPFTSVQQ-S-------------------- 143 (216)
Q Consensus 88 ~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~---~~~~~~~~~~~~~~~~~~~-~-------------------- 143 (216)
+++|.+|.+|+++. .+++||++||.+..... .+++++||+.+.+|...+. +
T Consensus 134 ----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 208 (306)
T 3ii7_A 134 ----PSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGG 208 (306)
T ss_dssp ----CCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred ----CCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeC
Confidence 78999999999998 89999999998654332 8999999999999984432 1
Q ss_pred --------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 --------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 --------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+.+... |.+|..|+++++ +++|||+||..... ..++++.||+.
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~--~~~i~v~GG~~~~~----------~~~~~~~yd~~ 271 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPM---PWKGVTVKCAAV--GSIVYVLAGFQGVG----------RLGHILEYNTE 271 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCC---SCCBSCCEEEEE--TTEEEEEECBCSSS----------BCCEEEEEETT
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCC---CCCccceeEEEE--CCEEEEEeCcCCCe----------eeeeEEEEcCC
Confidence 178999999999999654 789999988884 88999999985332 45688888876
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.95 E-value=6.1e-27 Score=190.17 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=145.0
Q ss_pred cccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCC
Q 027962 10 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 89 (216)
Q Consensus 10 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 89 (216)
++++++||++++ +|+++ .++|.+|.+|+++.+ +++||++||.. ...++++++||+.+ ++|+.+
T Consensus 23 ~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~~~d~~~--~~W~~~------ 85 (306)
T 3ii7_A 23 PQSCRYFNPKDY----SWTDI--RCPFEKRRDAACVFW-DNVVYILGGSQ--LFPIKRMDCYNVVK--DSWYSK------ 85 (306)
T ss_dssp TTSEEEEETTTT----EEEEC--CCCSCCCBSCEEEEE-TTEEEEECCBS--SSBCCEEEEEETTT--TEEEEE------
T ss_pred CceEEEecCCCC----CEecC--CCCCcccceeEEEEE-CCEEEEEeCCC--CCCcceEEEEeCCC--CeEEEC------
Confidence 889999999997 99998 468899999999999 58999999995 56789999999999 999999
Q ss_pred CCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c-------------------------
Q 027962 90 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S------------------------- 143 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+......+++++||+.+.+|...+. +
T Consensus 86 --~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 86 --LGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNN 162 (306)
T ss_dssp --ECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCT
T ss_pred --CCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCC
Confidence 67899999999998 899999999997556678999999999999974431 0
Q ss_pred -------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 -------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 -------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~i~v~GG~~~~~----------~~~~~~~yd~~ 224 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPM---IEARKNHGLVF--VKDKIFAVGGQNGLG----------GLDNVEYYDIK 224 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCEETTE----------EBCCEEEEETT
T ss_pred CcccccceEEEeCCCCCeEEECCCc---cchhhcceEEE--ECCEEEEEeCCCCCC----------CCceEEEeeCC
Confidence 056899999999999754 78899999988 488999999985431 45688888876
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.95 E-value=1e-26 Score=190.00 Aligned_cols=181 Identities=17% Similarity=0.284 Sum_probs=146.8
Q ss_pred cccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCC-CCceeCcEEEEecCCCCccEEEeccCcC
Q 027962 10 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGV-GYEVLNDVWFLDVYEGFFKWVQIPYELQ 88 (216)
Q Consensus 10 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~~~W~~~~~~~~ 88 (216)
.+++++||+.++ +|+++ .++|.+|.+|+++.+ +++||++||... ....++++++||+.+ ++|+.+
T Consensus 77 ~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~~W~~~----- 142 (318)
T 2woz_A 77 QSYFFQLDNVSS----EWVGL--PPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVA--AKWSEV----- 142 (318)
T ss_dssp CBEEEEEETTTT----EEEEC--SCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTT--TEEEEE-----
T ss_pred cccEEEEeCCCC----cEEEC--CCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCC--CCEeEC-----
Confidence 346999999997 99998 468899999999999 589999999852 456789999999999 999999
Q ss_pred CCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c------------------------
Q 027962 89 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S------------------------ 143 (216)
Q Consensus 89 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------------ 143 (216)
.++|.+|.+|++++ .+++||++||.+......+++++||+.+.+|...+. +
T Consensus 143 ---~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 143 ---KNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTED 218 (318)
T ss_dssp ---CCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETT
T ss_pred ---CCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCC
Confidence 68899999999998 999999999986656678999999999999984431 1
Q ss_pred ----cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeeccc
Q 027962 144 ----MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 214 (216)
Q Consensus 144 ----~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~~ 214 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||........ ........+++|.||+..
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~-~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTEF---PQERSSISLVS--LAGSLYAIGGFAMIQLES-KEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCCC---SSCCBSCEEEE--ETTEEEEECCBCCBC-----CCBCCBCCCEEEEETTT
T ss_pred CccceEEEEECCCCeEEECCCC---CCcccceEEEE--ECCEEEEECCeeccCCCC-ceeccceeeeEEEEeCCC
Confidence 167899999999998654 78899998888 588999999985421111 111122568999999863
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.95 E-value=2.6e-26 Score=186.14 Aligned_cols=172 Identities=18% Similarity=0.264 Sum_probs=144.3
Q ss_pred cccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 8 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
..++++++||+.++ +|++++ ++|.+|.+|+++.+ +++||++||.. ....++++++||+.+ ++|+.+
T Consensus 74 ~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~~d~~~--~~W~~~---- 139 (302)
T 2xn4_A 74 LRVRTVDSYDPVKD----QWTSVA--NMRDRRSTLGAAVL-NGLLYAVGGFD-GSTGLSSVEAYNIKS--NEWFHV---- 139 (302)
T ss_dssp SBCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEEEEEC-SSCEEEEEEEEETTT--TEEEEE----
T ss_pred ccccceEEECCCCC----ceeeCC--CCCccccceEEEEE-CCEEEEEcCCC-CCccCceEEEEeCCC--CeEeec----
Confidence 45789999999997 999984 68899999999999 58999999995 456789999999999 999999
Q ss_pred CCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCC-CCCCceEEEecCCCCcccccc-c----------------------
Q 027962 88 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR-RRKDDFWVLDTKAIPFTSVQQ-S---------------------- 143 (216)
Q Consensus 88 ~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~~~~~~~~~~~~~~-~---------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+... ...+++++||+.+.+|..... +
T Consensus 140 ----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 140 ----APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp ----CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBS
T ss_pred ----CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCC
Confidence 68899999999988 899999999986543 357899999999999984431 0
Q ss_pred ------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 ------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 ------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~--~~~~i~v~GG~~~~~----------~~~~v~~yd~~ 275 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADM---NMCRRNAGVCA--VNGLLYVVGGDDGSC----------NLASVEYYNPT 275 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCBCSSS----------BCCCEEEEETT
T ss_pred CCcccceEEEEeCCCCCEeeCCCC---CCccccCeEEE--ECCEEEEECCcCCCc----------ccccEEEEcCC
Confidence 177899999999999754 78899898887 488999999984321 34678888875
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=185.51 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=144.8
Q ss_pred CcccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccC
Q 027962 7 GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYE 86 (216)
Q Consensus 7 ~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~ 86 (216)
...++++++||+.++ +|+++ .++|.+|.+|+++.+ +++||++||.. .....+++++||+.+ ++|+++
T Consensus 26 ~~~~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~~~~~d~~~--~~W~~~--- 92 (302)
T 2xn4_A 26 PKAIRSVECYDFKEE----RWHQV--AELPSRRCRAGMVYM-AGLVFAVGGFN-GSLRVRTVDSYDPVK--DQWTSV--- 92 (302)
T ss_dssp SSBCCCEEEEETTTT----EEEEE--CCCSSCCBSCEEEEE-TTEEEEESCBC-SSSBCCCEEEEETTT--TEEEEE---
T ss_pred CCCCCcEEEEcCcCC----cEeEc--ccCCcccccceEEEE-CCEEEEEeCcC-CCccccceEEECCCC--CceeeC---
Confidence 345789999999997 99998 478889999999999 68999999985 445689999999999 999999
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c----------------------
Q 027962 87 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S---------------------- 143 (216)
Q Consensus 87 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+. ....+++++||+.+.+|...+. +
T Consensus 93 -----~~~p~~r~~~~~~~-~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 93 -----ANMRDRRSTLGAAV-LNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp -----CCCSSCCBSCEEEE-ETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred -----CCCCccccceEEEE-ECCEEEEEcCCCC-CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCC
Confidence 67999999999999 8999999999875 4557899999999999974431 0
Q ss_pred --------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 --------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 --------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+..||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~----------~~~~~~~yd~~ 228 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEM---STRRSGAGVGV--LNNLLYAVGGHDGPL----------VRKSVEVYDPT 228 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCBSSSS----------BCCCEEEEETT
T ss_pred CCCCccccEEEEEeCCCCcEEECCCC---ccccccccEEE--ECCEEEEECCCCCCc----------ccceEEEEeCC
Confidence 167899999999999654 78899998888 488999999985321 45788888875
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.94 E-value=3e-26 Score=186.55 Aligned_cols=173 Identities=17% Similarity=0.182 Sum_probs=145.8
Q ss_pred CcccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCC---CCCceeCcEEEEecCCCCccEEEe
Q 027962 7 GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRG---VGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 7 ~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~---~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
+..++++++||+.++ +|+++ .++|.+|.+|+++.+ +++||++||.. ......+++++||+.+ ++|+++
T Consensus 35 ~~~~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~--~~W~~~ 105 (308)
T 1zgk_A 35 RQSLSYLEAYNPSNG----TWLRL--ADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMT--NQWSPC 105 (308)
T ss_dssp SSBCCCEEEEETTTT----EEEEC--CCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTT--TEEEEC
T ss_pred CCCcceEEEEcCCCC----eEeEC--CCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCC--CeEeEC
Confidence 456899999999997 99998 478899999999999 68999999983 3456789999999999 999999
Q ss_pred ccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c-------------------
Q 027962 84 PYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S------------------- 143 (216)
Q Consensus 84 ~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+. ....+++++||+.+.+|...+. +
T Consensus 106 --------~~~p~~r~~~~~~~-~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 175 (308)
T 1zgk_A 106 --------APMSVPRNRIGVGV-IDGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVG 175 (308)
T ss_dssp --------CCCSSCCBTCEEEE-ETTEEEEECCEET-TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred --------CCCCcCccccEEEE-ECCEEEEEcCCCC-CcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEe
Confidence 67899999999999 8999999999865 3457899999999999984431 1
Q ss_pred ---------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 ---------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 ---------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~----------~~~~v~~yd~~ 239 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAM---NTIRSGAGVCV--LHNCIYAAGGYDGQD----------QLNSVERYDVE 239 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEE--ETTEEEEECCBCSSS----------BCCCEEEEETT
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCC---CCccccceEEE--ECCEEEEEeCCCCCC----------ccceEEEEeCC
Confidence 177899999999998654 78999999888 488999999985331 35788888875
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.94 E-value=5e-26 Score=185.23 Aligned_cols=171 Identities=16% Similarity=0.166 Sum_probs=145.0
Q ss_pred cccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 8 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
..++++++||+.++ +|+++ .++|.+|.+|+++.+ +++||++||.. ....++++++||+.+ ++|+.+
T Consensus 87 ~~~~~~~~~d~~~~----~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~~--~~W~~~---- 152 (308)
T 1zgk_A 87 TDSSALDCYNPMTN----QWSPC--APMSVPRNRIGVGVI-DGHIYAVGGSH-GCIHHNSVERYEPER--DEWHLV---- 152 (308)
T ss_dssp EECCCEEEEETTTT----EEEEC--CCCSSCCBTCEEEEE-TTEEEEECCEE-TTEECCCEEEEETTT--TEEEEC----
T ss_pred eecceEEEECCCCC----eEeEC--CCCCcCccccEEEEE-CCEEEEEcCCC-CCcccccEEEECCCC--CeEeEC----
Confidence 34789999999997 99998 468889999999999 68999999985 456789999999999 999999
Q ss_pred CCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c-----------------------
Q 027962 88 QNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S----------------------- 143 (216)
Q Consensus 88 ~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+.. ...+++++||+.+.+|..... +
T Consensus 153 ----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 153 ----APMLTRRIGVGVAV-LNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp ----CCCSSCCBSCEEEE-ETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred ----CCCCccccceEEEE-ECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCC
Confidence 67899999999998 89999999999754 348999999999999974431 0
Q ss_pred -----cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 -----MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 -----~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+..||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~i~v~GG~~~~~----------~~~~v~~yd~~ 286 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPM---KHRRSALGITV--HQGRIYVLGGYDGHT----------FLDSVECYDPD 286 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEE--ETTEEEEECCBCSSC----------BCCEEEEEETT
T ss_pred CCccceEEEEeCCCCcEEECCCC---CCCccceEEEE--ECCEEEEEcCcCCCc----------ccceEEEEcCC
Confidence 178999999999998754 78899999888 488999999975321 45788999876
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.94 E-value=9.9e-26 Score=182.49 Aligned_cols=171 Identities=16% Similarity=0.240 Sum_probs=144.2
Q ss_pred cccccEEEEeccCCccccc---eEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEec
Q 027962 8 LRLGDTWVLELSENFCFGS---WQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 84 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~---W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~ 84 (216)
..++++++||+.++ + |+++ .++|.+|.+|+++.+ +++||++||.. .....+++++||+.+ ++|+.+
T Consensus 75 ~~~~~~~~~d~~~~----~~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~~~~~d~~~--~~W~~~- 143 (301)
T 2vpj_A 75 SRLSSVECLDYTAD----EDGVWYSV--APMNVRRGLAGATTL-GDMIYVSGGFD-GSRRHTSMERYDPNI--DQWSML- 143 (301)
T ss_dssp CBCCCEEEEETTCC----TTCCCEEE--CCCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCEEEEEETTT--TEEEEE-
T ss_pred ccCceEEEEECCCC----CCCeeEEC--CCCCCCccceeEEEE-CCEEEEEcccC-CCcccceEEEEcCCC--CeEEEC-
Confidence 45789999999997 8 9998 578899999999999 68999999995 455689999999999 999999
Q ss_pred cCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c--------------------
Q 027962 85 YELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S-------------------- 143 (216)
Q Consensus 85 ~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+.. ...+++++||+.+.+|...+. +
T Consensus 144 -------~~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 144 -------GDMQTAREGAGLVV-ASGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp -------EECSSCCBSCEEEE-ETTEEEEECCBCSS-CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred -------CCCCCCcccceEEE-ECCEEEEECCCCCC-cccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeC
Confidence 67899999999998 89999999998753 468999999999999984431 0
Q ss_pred --------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 --------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 --------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+..||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~i~v~GG~~~~~----------~~~~v~~yd~~ 277 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSM---TTPRCYVGATV--LRGRLYAIAGYDGNS----------LLSSIECYDPI 277 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCBCSSS----------BEEEEEEEETT
T ss_pred CCCCcccceEEEEeCCCCcEEECCCC---CCcccceeEEE--ECCEEEEEcCcCCCc----------ccccEEEEcCC
Confidence 167899999999999654 78899998888 488999999975331 44688888875
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=181.63 Aligned_cols=172 Identities=18% Similarity=0.216 Sum_probs=145.3
Q ss_pred CcccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCcc---EEEe
Q 027962 7 GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFK---WVQI 83 (216)
Q Consensus 7 ~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~---W~~~ 83 (216)
+..++++++||+.++ +|++++ ++|.+|.+|+++.+ +++||++||.. .....+++++||+.+ ++ |+.+
T Consensus 27 ~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~l~v~GG~~-~~~~~~~~~~~d~~~--~~~~~W~~~ 96 (301)
T 2vpj_A 27 QSPIDVVEKYDPKTQ----EWSFLP--SITRKRRYVASVSL-HDRIYVIGGYD-GRSRLSSVECLDYTA--DEDGVWYSV 96 (301)
T ss_dssp TEECCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEEEETTC--CTTCCCEEE
T ss_pred CcceeEEEEEcCCCC----eEEeCC--CCChhhccccEEEE-CCEEEEEcCCC-CCccCceEEEEECCC--CCCCeeEEC
Confidence 355899999999997 999984 67889999999999 58999999995 556789999999999 99 9999
Q ss_pred ccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCcccccc-c-------------------
Q 027962 84 PYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQ-S------------------- 143 (216)
Q Consensus 84 ~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------- 143 (216)
.++|.+|.+|+++. .+++||++||.+. ....+++++||+.+.+|...+. +
T Consensus 97 --------~~~p~~r~~~~~~~-~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 97 --------APMNVRRGLAGATT-LGDMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166 (301)
T ss_dssp --------CCCSSCCBSCEEEE-ETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred --------CCCCCCccceeEEE-ECCEEEEEcccCC-CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence 78999999999999 8999999999975 3458899999999999984431 0
Q ss_pred ---------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 ---------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 ---------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..++++.||+.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~--~~~~i~v~GG~~~~~----------~~~~v~~yd~~ 230 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPM---ATKRSGAGVAL--LNDHIYVVGGFDGTA----------HLSSVEAYNIR 230 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCBCSSS----------BCCCEEEEETT
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCC---CcccccceEEE--ECCEEEEEeCCCCCc----------ccceEEEEeCC
Confidence 177899999999999654 78999999888 488999999985332 35788888875
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=183.15 Aligned_cols=171 Identities=15% Similarity=0.159 Sum_probs=140.6
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccC-----CCCCceeCcEEEEecCCCCccEEEecc
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGR-----GVGYEVLNDVWFLDVYEGFFKWVQIPY 85 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~-----~~~~~~~~~~~~~d~~~~~~~W~~~~~ 85 (216)
+++++||++++ +|... ..+.|.+|.+|+++.+ +++||++||. .......+++++||+.+ ++|+.+
T Consensus 13 ~~~~~yd~~~~----~W~~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~-- 82 (315)
T 4asc_A 13 EGAVAYDPAAN----ECYCA-SLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD--SEWLGM-- 82 (315)
T ss_dssp TEEEEEETTTT----EEEEE-ECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTT--TEEEEC--
T ss_pred CceEEECCCCC----eEecC-CCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCC--CeEEEC--
Confidence 58999999997 99873 3345779999999999 5899999996 22344567799999999 999999
Q ss_pred CcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcC--CCCCCCCceEEEecCCCCcccccc-c-------------------
Q 027962 86 ELQNIPAGFSLPRVGHSATLILGGRVLIYGGED--SARRRKDDFWVLDTKAIPFTSVQQ-S------------------- 143 (216)
Q Consensus 86 ~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~--~~~~~~~~~~~~~~~~~~~~~~~~-~------------------- 143 (216)
.++|.+|.+|++++ .+++||++||.+ ......+++++||+.+.+|...+. +
T Consensus 83 ------~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 83 ------PPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp ------CCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred ------CCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEe
Confidence 77999999999999 899999999975 235678999999999999974431 1
Q ss_pred ----------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 ----------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 ----------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~----------~~~~~~~yd~~ 220 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPM---QTARSLFGATV--HDGRIIVAAGVTDTG----------LTSSAEVYSIT 220 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEE--ETTEEEEEEEECSSS----------EEEEEEEEETT
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCC---CCchhceEEEE--ECCEEEEEeccCCCC----------ccceEEEEECC
Confidence 178999999999998754 78999999988 488999999985432 45688888875
No 12
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.92 E-value=2.2e-24 Score=193.48 Aligned_cols=163 Identities=20% Similarity=0.293 Sum_probs=135.8
Q ss_pred cccccEEEEeccCCccccceEEcc-c---CCCCCCCcCceEEEEc-CCeEEEEccCCCCCceeCcEEEEecCCCCccEEE
Q 027962 8 LRLGDTWVLELSENFCFGSWQQLV-T---HPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ 82 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~W~~~~-~---~~~p~~r~~h~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~ 82 (216)
..++++|+||+.++ +|+++. . +.+|.+|.+|+++.+. +++|||+||.+.....++++|+||+.+ ++|+.
T Consensus 409 ~~~~~v~~yd~~~~----~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t--~~W~~ 482 (695)
T 2zwa_A 409 YRVNEILQLSIHYD----KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT--REWSM 482 (695)
T ss_dssp SBCCCEEEEEECSS----CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT--TEEEE
T ss_pred CCcCcEEEEECCCC----eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC--CcEEE
Confidence 56899999999997 999986 3 3589999999999994 479999999965555789999999999 99999
Q ss_pred eccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCccccccccccccCcccCCceEeecCC
Q 027962 83 IPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEG 162 (216)
Q Consensus 83 ~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 162 (216)
+ +++|.+|.+|+++++.+++||+|||.+... ++++||+. +++|+.+...+
T Consensus 483 ~--------~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~------------------t~~W~~~~~~g 532 (695)
T 2zwa_A 483 I--------KSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVT------------------EEIFKDVTPKD 532 (695)
T ss_dssp C--------CCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETT------------------TTEEEECCCSS
T ss_pred C--------CCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECC------------------CCceEEccCCC
Confidence 9 789999999999984499999999997543 99999999 77999998877
Q ss_pred CCCCCCcceeEEEecCC-CEEEEEccccCCCCCCCCCcccccccceeEeeccc
Q 027962 163 YKPNCRSFHRACPDYSG-RYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 214 (216)
Q Consensus 163 ~~~~~r~~h~~~~~~~~-~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~~ 214 (216)
..|.+|.+|+++++..+ ++|||+||...... ...+++++||+..
T Consensus 533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--------~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--------TVSDKAIIFKYDA 577 (695)
T ss_dssp GGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--------CBCCEEEEEEECT
T ss_pred CCCCcccceeEEEEeCCCCEEEEECCcCCCCC--------eeeCcEEEEEccC
Confidence 77899999997764333 89999999854321 1557889888753
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.92 E-value=1.8e-24 Score=176.61 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=137.3
Q ss_pred cEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCC-----CceeCcEEEEecCCCCccEEEeccC
Q 027962 12 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVG-----YEVLNDVWFLDVYEGFFKWVQIPYE 86 (216)
Q Consensus 12 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~d~~~~~~~W~~~~~~ 86 (216)
++++||++++ +|...+ .+.|.+|.+|+++.+ +++||++||.... ....+++++||+.+ ++|+++
T Consensus 25 ~~~~yd~~~~----~W~~~~-~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~--- 93 (318)
T 2woz_A 25 AAVAYDPMEN----ECYLTA-LAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVS--SEWVGL--- 93 (318)
T ss_dssp EEEEEETTTT----EEEEEE-ECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEETTT--TEEEEC---
T ss_pred ceEEECCCCC----ceeccc-CCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeCCC--CcEEEC---
Confidence 5899999997 998853 345679999999999 5899999996311 12345599999999 999999
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCC-CCCCCCceEEEecCCCCcccccc-c---------------------
Q 027962 87 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDS-ARRRKDDFWVLDTKAIPFTSVQQ-S--------------------- 143 (216)
Q Consensus 87 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~~~~~~~~~~~~~~-~--------------------- 143 (216)
+++|.+|.+|++++ .+++||++||... .....+++++||+.+.+|..... +
T Consensus 94 -----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 94 -----PPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp -----SCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred -----CCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 78999999999998 8999999999863 34567899999999999984421 1
Q ss_pred --------cccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 144 --------MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 144 --------~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+.+||+.+++|+++... |.+|..|++++ .+++|||+||..... ..+++++||+.
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~----------~~~~~~~yd~~ 230 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPM---KTPRSMFGVAI--HKGKIVIAGGVTEDG----------LSASVEAFDLK 230 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEEEEEETTE----------EEEEEEEEETT
T ss_pred CCCCCccceEEEEcCCCCEEEECCCC---CCCcccceEEE--ECCEEEEEcCcCCCC----------ccceEEEEECC
Confidence 178999999999999754 78999999888 588999999985431 45688888876
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.92 E-value=2.6e-24 Score=178.14 Aligned_cols=176 Identities=16% Similarity=0.224 Sum_probs=133.6
Q ss_pred cccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCC-------------------------
Q 027962 8 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGY------------------------- 62 (216)
Q Consensus 8 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~------------------------- 62 (216)
..++++|+||++++ +|+++...+ |.+|.+|+++.+ +++|||+||.....
T Consensus 83 ~~~~~v~~yd~~~~----~W~~~~~~~-p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 83 QVFNDVHKYNPKTN----SWVKLMSHA-PMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp EECCCEEEEETTTT----EEEECSCCC-SSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeeccEEEEeCCCC----cEEECCCCC-CcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 34899999999997 999986322 589999999998 68999999984221
Q ss_pred --------ceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCC-ceEEEEeCCEEEEEeCcCCCCCCCCceEEEec-
Q 027962 63 --------EVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVG-HSATLILGGRVLIYGGEDSARRRKDDFWVLDT- 132 (216)
Q Consensus 63 --------~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~- 132 (216)
..++++++||+.+ ++|+.+ .++|.+|.. |++++ .+++||+|||.+......+++++||+
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~--~~W~~~--------~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPST--QQWSYA--------GESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTT--TEEEEE--------EECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC
T ss_pred ccccccccCCcccEEEEeCCC--CcEEEC--------CCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEec
Confidence 2468999999999 999999 567766554 88877 89999999998765556789999987
Q ss_pred -CCCCcccccc---c---------------------------------------------cccccCcccCCceEeecCCC
Q 027962 133 -KAIPFTSVQQ---S---------------------------------------------MLDSRGLLLNMWKRLRAEGY 163 (216)
Q Consensus 133 -~~~~~~~~~~---~---------------------------------------------~~~~~~~~~~~W~~~~~~~~ 163 (216)
++.+|..... + .+.+||+.+++|+++...
T Consensus 226 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-- 303 (357)
T 2uvk_A 226 GNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-- 303 (357)
T ss_dssp ---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC--
T ss_pred CCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC--
Confidence 8888974321 0 134789999999999765
Q ss_pred CCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeeccc
Q 027962 164 KPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 214 (216)
Q Consensus 164 ~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~~ 214 (216)
|.+|..|++++ .+++||||||...... ..+|+++|+++.
T Consensus 304 -p~~r~~~~~~~--~~~~i~v~GG~~~~~~---------~~~~v~~l~~~~ 342 (357)
T 2uvk_A 304 -SQGRAYGVSLP--WNNSLLIIGGETAGGK---------AVTDSVLITVKD 342 (357)
T ss_dssp -SSCCBSSEEEE--ETTEEEEEEEECGGGC---------EEEEEEEEEC-C
T ss_pred -CCCcccceeEE--eCCEEEEEeeeCCCCC---------EeeeEEEEEEcC
Confidence 78999998887 5899999999854321 357888888763
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.91 E-value=3.4e-23 Score=171.46 Aligned_cols=153 Identities=17% Similarity=0.259 Sum_probs=122.1
Q ss_pred cccEEEEeccC--CccccceEEcccCCCC-CCCcCceEEEEcCCeEEEEccCC----CCCceeCcEEEEecCCCCccEEE
Q 027962 10 LGDTWVLELSE--NFCFGSWQQLVTHPSP-PARSGHSLTRIGGNRTVLFGGRG----VGYEVLNDVWFLDVYEGFFKWVQ 82 (216)
Q Consensus 10 ~~~~~~~d~~~--~~~~~~W~~~~~~~~p-~~r~~h~~~~~~~~~iyv~GG~~----~~~~~~~~~~~~d~~~~~~~W~~ 82 (216)
.+++|+||+.+ + +|++++ ++| .+|.+|+++.+ +++||||||.+ .....++++++||+.+ ++|++
T Consensus 30 ~~~~~~~d~~~~~~----~W~~~~--~~p~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~--~~W~~ 100 (357)
T 2uvk_A 30 GTAWYKLDTQAKDK----KWTALA--AFPGGPRDQATSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT--NSWVK 100 (357)
T ss_dssp TTCEEEEETTSSSC----CEEECC--CCTTCCCBSCEEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTT--TEEEE
T ss_pred CCeEEEEccccCCC----CeeECC--CCCCCcCccceEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCC--CcEEE
Confidence 46999999984 5 999984 577 79999999999 58999999982 2346789999999999 99999
Q ss_pred eccCcCCCCCCC-CCCCCCceEEEEeCCEEEEEeCcCCCC---------------------------------CCCCceE
Q 027962 83 IPYELQNIPAGF-SLPRVGHSATLILGGRVLIYGGEDSAR---------------------------------RRKDDFW 128 (216)
Q Consensus 83 ~~~~~~~~~~~~-p~~r~~~~~~~~~~~~l~v~GG~~~~~---------------------------------~~~~~~~ 128 (216)
+ ..+ |.+|.+|++++ .+++||++||.+... ...++++
T Consensus 101 ~--------~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 101 L--------MSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp C--------SCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred C--------CCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 9 344 49999999998 999999999986421 2468999
Q ss_pred EEecCCCCccccccccccccCcccCCceEeecCCCCCCCC-cceeEEEecCCCEEEEEccccCCCCCCCCCcccccccce
Q 027962 129 VLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCR-SFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRL 207 (216)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~r-~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~ 207 (216)
+||+. +++|+.+... |.+| .+|++++ .+++|||+||..... ...+++
T Consensus 172 ~yd~~------------------~~~W~~~~~~---p~~~~~~~~~~~--~~~~iyv~GG~~~~~---------~~~~~v 219 (357)
T 2uvk_A 172 SFDPS------------------TQQWSYAGES---PWYGTAGAAVVN--KGDKTWLINGEAKPG---------LRTDAV 219 (357)
T ss_dssp EEETT------------------TTEEEEEEEC---SSCCCBSCEEEE--ETTEEEEECCEEETT---------EECCCE
T ss_pred EEeCC------------------CCcEEECCCC---CCCCcccccEEE--ECCEEEEEeeecCCC---------cccCce
Confidence 99998 7799999764 5554 5588877 589999999985332 134677
Q ss_pred eEeec
Q 027962 208 LLVEL 212 (216)
Q Consensus 208 ~~~~~ 212 (216)
+.||+
T Consensus 220 ~~~d~ 224 (357)
T 2uvk_A 220 FELDF 224 (357)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77776
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.89 E-value=2.7e-22 Score=179.99 Aligned_cols=165 Identities=15% Similarity=0.155 Sum_probs=127.7
Q ss_pred ccccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcC
Q 027962 9 RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQ 88 (216)
Q Consensus 9 ~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~ 88 (216)
.++++|+||+.++ +|+++ .++|.+|.+|+++.+.+++||||||.+... ++++||+.+ ++|+.+.
T Consensus 466 ~~~dv~~yd~~t~----~W~~~--~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t--~~W~~~~---- 529 (695)
T 2zwa_A 466 GLSDNWIFDMKTR----EWSMI--KSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTE--EIFKDVT---- 529 (695)
T ss_dssp BCCCCEEEETTTT----EEEEC--CCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTT--TEEEECC----
T ss_pred ccccEEEEeCCCC----cEEEC--CCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCC--CceEEcc----
Confidence 5899999999997 99998 578899999999997457999999995333 899999999 9999995
Q ss_pred CCCCCCCCCCCCceEEEEe-C-CEEEEEeCcCCCC-CCCCceEEEecCCCCccccccccccccCcccCCceEeecCCCCC
Q 027962 89 NIPAGFSLPRVGHSATLIL-G-GRVLIYGGEDSAR-RRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKP 165 (216)
Q Consensus 89 ~~~~~~p~~r~~~~~~~~~-~-~~l~v~GG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 165 (216)
..+++|.+|.+|+++++. + ++||++||....+ ...+++++||+.+++|. ....|+++... .+
T Consensus 530 -~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~------------~~~~W~~~~~~--p~ 594 (695)
T 2zwa_A 530 -PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENAT------------EPITVIKKLQH--PL 594 (695)
T ss_dssp -CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSS------------CCEEEEEEEEC--GG
T ss_pred -CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccc------------cceEEEEcCCC--CC
Confidence 334589999999977732 2 8999999996543 56899999999944220 01128888763 14
Q ss_pred CCCcceeEEEecCC-CEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 166 NCRSFHRACPDYSG-RYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 166 ~~r~~h~~~~~~~~-~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
.+|.+|+++++ + ++|||+||...... ....++++.||+.
T Consensus 595 ~~R~~~~~~~~--~~~~iyv~GG~~~~~~-------~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 595 FQRYGSQIKYI--TPRKLLIVGGTSPSGL-------FDRTNSIISLDPL 634 (695)
T ss_dssp GCCBSCEEEEE--ETTEEEEECCBCSSCC-------CCTTTSEEEEETT
T ss_pred CCcccceEEEe--CCCEEEEECCccCCCC-------CCCCCeEEEEECC
Confidence 78999998884 5 89999999853321 0245788888876
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.78 E-value=1.4e-17 Score=148.36 Aligned_cols=178 Identities=14% Similarity=0.074 Sum_probs=131.3
Q ss_pred ccccEEEEeccCCccccceEEcccCCCCCCCcCce--EEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccC
Q 027962 9 RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHS--LTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYE 86 (216)
Q Consensus 9 ~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~ 86 (216)
..+++++||++++ +|+++. .+|.+|..|+ ++.+.+++||++||... +++++||+.+ ++|+++
T Consensus 217 ~~~~~~~yd~~t~----~w~~~~--~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t--~~W~~~--- 280 (656)
T 1k3i_A 217 GITLTSSWDPSTG----IVSDRT--VTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSS--DSWIPG--- 280 (656)
T ss_dssp SEEEEEEECTTTC----CBCCCE--EEECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGG--TEEEEC---
T ss_pred CeEEEEEEeCCCC----cEEeCc--ccCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcC--CceeEC---
Confidence 3568999999997 999874 4566676654 45444689999999853 2799999999 999999
Q ss_pred cCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCccccc------c------------------
Q 027962 87 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQ------Q------------------ 142 (216)
Q Consensus 87 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~------~------------------ 142 (216)
.++|.+|.+|+++++.+++||++||........+++++||+.+.+|...+ .
T Consensus 281 -----~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~ 355 (656)
T 1k3i_A 281 -----PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF 355 (656)
T ss_dssp -----CCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEE
T ss_pred -----CCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEE
Confidence 78999999999988339999999996444556788999999888886320 0
Q ss_pred ----------------------------------------------------c------------------------ccc
Q 027962 143 ----------------------------------------------------S------------------------MLD 146 (216)
Q Consensus 143 ----------------------------------------------------~------------------------~~~ 146 (216)
. .+.
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 0 144
Q ss_pred ccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 147 SRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 147 ~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
+||+.+++|.++. .+..|.+|..|++++. .+++|||+||........ .....+++++||..
T Consensus 436 ~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l-~~g~i~v~GG~~~~~~~~----~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 436 LGEPGTSPNTVFA-SNGLYFARTFHTSVVL-PDGSTFITGGQRRGIPFE----DSTPVFTPEIYVPE 496 (656)
T ss_dssp CCSTTSCCEEEEC-TTCCSSCCBSCEEEEC-TTSCEEEECCBSBCCTTC----CCSBCCCCEEEEGG
T ss_pred cCCCCCCCeeEEc-cCCCCCCcccCCeEEC-CCCCEEEECCcccCcCcC----CCCcccceEEEcCC
Confidence 6778888898876 2345889999988774 478999999985331100 11245677888764
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.69 E-value=1e-16 Score=142.90 Aligned_cols=147 Identities=11% Similarity=0.060 Sum_probs=105.7
Q ss_pred EEEEeccCCccccceEEcccCCCCCCCcCceEEEEc-CCeEEEEccCCCC-----CceeCcEEEEecCCCCccEEEeccC
Q 027962 13 TWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVG-----YEVLNDVWFLDVYEGFFKWVQIPYE 86 (216)
Q Consensus 13 ~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~-~~~iyv~GG~~~~-----~~~~~~~~~~d~~~~~~~W~~~~~~ 86 (216)
+..||+.++ +|+.+. |.|+..|+++.+. +++||++||.... ....+++++||+.+ ++|+.+
T Consensus 168 ~~~~dp~~~----~W~~~~----~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~--- 234 (656)
T 1k3i_A 168 YTAPQPGLG----RWGPTI----DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDR--- 234 (656)
T ss_dssp CCCCCTTSC----EEEEEE----ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCC---
T ss_pred cccCCCCCC----eeeeec----cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC--CcEEeC---
Confidence 444566675 999873 3456667777663 5899999997432 12345799999999 999988
Q ss_pred cCCCCCCCCCCCCCce--EEEEeCCEEEEEeCcCCCCCCCCceEEEecCCCCccccccccccccCcccCCceEeecCCCC
Q 027962 87 LQNIPAGFSLPRVGHS--ATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYK 164 (216)
Q Consensus 87 ~~~~~~~~p~~r~~~~--~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 164 (216)
..+|.+|..++ +++..+++||++||.+. .++++||+. +++|+++..+
T Consensus 235 -----~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~------------------t~~W~~~~~~--- 283 (656)
T 1k3i_A 235 -----TVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSS------------------SDSWIPGPDM--- 283 (656)
T ss_dssp -----EEEECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGG------------------GTEEEECCCC---
T ss_pred -----cccCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCc------------------CCceeECCCC---
Confidence 45677776554 44437899999999864 279999998 7799988654
Q ss_pred CCCCcceeEEEecCCCEEEEEccccCCCCCCCCCcccccccceeEeecc
Q 027962 165 PNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 213 (216)
Q Consensus 165 ~~~r~~h~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 213 (216)
+.+|..|+++++ .+++|||+||..+... ..+++++||..
T Consensus 284 ~~~R~~~s~~~~-~dg~iyv~GG~~~~~~---------~~~~~e~yd~~ 322 (656)
T 1k3i_A 284 QVARGYQSSATM-SDGRVFTIGGSWSGGV---------FEKNGEVYSPS 322 (656)
T ss_dssp SSCCSSCEEEEC-TTSCEEEECCCCCSSS---------CCCCEEEEETT
T ss_pred CccccccceEEe-cCCeEEEEeCcccCCc---------ccccceEeCCC
Confidence 789999988873 3889999999643321 33566666654
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=90.83 E-value=5 Score=31.63 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=51.0
Q ss_pred ccEEEEeccCCccccceEE-cccCCCCCCCcCceEEEEcCCeEEEEccCCCCCce----eCcEEEEecCCCCccEEEecc
Q 027962 11 GDTWVLELSENFCFGSWQQ-LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEV----LNDVWFLDVYEGFFKWVQIPY 85 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~-~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~----~~~~~~~d~~~~~~~W~~~~~ 85 (216)
+.+.++|+++. +..+ +..+.. | +.++.-.++++|+.......... .+.++++|+.+ .+....
T Consensus 152 ~~v~viD~~t~----~~~~~i~~g~~--p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--~~v~~~-- 218 (328)
T 3dsm_A 152 NRILKIDTETD----KVVDELTIGIQ--P---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--FTVEKQ-- 218 (328)
T ss_dssp CEEEEEETTTT----EEEEEEECSSC--B---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--TEEEEE--
T ss_pred CEEEEEECCCC----eEEEEEEcCCC--c---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--CeEEEE--
Confidence 46888999885 4332 222221 2 23333445788777532111111 36799999988 655432
Q ss_pred CcCCCCCCCCCCCCCceEEEEe-CCEEEEEeCcCCCCCCCCceEEEecCC
Q 027962 86 ELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 134 (216)
Q Consensus 86 ~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~ 134 (216)
-..|....-...++.. ++.||+..+ .++++|+.+
T Consensus 219 ------~~~~~g~~p~~la~~~d~~~lyv~~~---------~v~~~d~~t 253 (328)
T 3dsm_A 219 ------FKFKLGDWPSEVQLNGTRDTLYWINN---------DIWRMPVEA 253 (328)
T ss_dssp ------EECCTTCCCEEEEECTTSCEEEEESS---------SEEEEETTC
T ss_pred ------EecCCCCCceeEEEecCCCEEEEEcc---------EEEEEECCC
Confidence 1122222223444422 567777532 789999874
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=86.15 E-value=9.8 Score=29.18 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=55.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 90 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 90 (216)
+.+..+|+++. +=.+- -++|..-.+..++.. ++++|+.... .+.++.||.++ .+- +
T Consensus 43 S~v~~vD~~tg----kv~~~--~~l~~~~fgeGi~~~-~~~ly~ltw~------~~~v~v~D~~t--l~~--~------- 98 (243)
T 3mbr_X 43 SSVRKVDLETG----RILQR--AEVPPPYFGAGIVAW-RDRLIQLTWR------NHEGFVYDLAT--LTP--R------- 98 (243)
T ss_dssp CEEEEEETTTC----CEEEE--EECCTTCCEEEEEEE-TTEEEEEESS------SSEEEEEETTT--TEE--E-------
T ss_pred ceEEEEECCCC----CEEEE--EeCCCCcceeEEEEe-CCEEEEEEee------CCEEEEEECCc--CcE--E-------
Confidence 57888999985 33221 134444455666777 5799998544 25689999987 433 2
Q ss_pred CCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 91 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 91 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
...+.+-.+.+.+. .+++||+.-| .+.++.+|+++.
T Consensus 99 -~ti~~~~~Gwglt~-dg~~L~vSdg-------s~~l~~iDp~t~ 134 (243)
T 3mbr_X 99 -ARFRYPGEGWALTS-DDSHLYMSDG-------TAVIRKLDPDTL 134 (243)
T ss_dssp -EEEECSSCCCEEEE-CSSCEEEECS-------SSEEEEECTTTC
T ss_pred -EEEeCCCCceEEee-CCCEEEEECC-------CCeEEEEeCCCC
Confidence 12233335556665 6777888644 235666666653
No 21
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=83.13 E-value=19 Score=31.65 Aligned_cols=77 Identities=16% Similarity=0.033 Sum_probs=42.4
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR 122 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~ 122 (216)
+-++. ++.+|+.... ..++.+|..+++..|+.-............+.....+.++ .+++||+.. .
T Consensus 61 ~P~v~-~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~-~----- 125 (668)
T 1kv9_A 61 TPLFH-DGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGT-L----- 125 (668)
T ss_dssp CCEEE-TTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEEC-T-----
T ss_pred CCEEE-CCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEc-C-----
Confidence 33455 5788887542 3589999988888898752000000000001111223344 778877742 1
Q ss_pred CCCceEEEecCCC
Q 027962 123 RKDDFWVLDTKAI 135 (216)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (216)
...++++|..+-
T Consensus 126 -dg~l~alD~~tG 137 (668)
T 1kv9_A 126 -DGRLIALDAKTG 137 (668)
T ss_dssp -TSEEEEEETTTC
T ss_pred -CCEEEEEECCCC
Confidence 246899998866
No 22
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.71 E-value=30 Score=30.60 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=42.1
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR 122 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~ 122 (216)
+-++. ++.+|+.... +.++.+|..+++..|+.-............+.....+.++ .+++||+-. .
T Consensus 65 ~P~v~-~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~-~----- 129 (689)
T 1yiq_A 65 TPIVV-DGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGV-L----- 129 (689)
T ss_dssp CCEEE-TTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEEC-T-----
T ss_pred cCEEE-CCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEc-c-----
Confidence 33445 5788887542 3589999998888898652000000000000111122344 788877743 1
Q ss_pred CCCceEEEecCCC
Q 027962 123 RKDDFWVLDTKAI 135 (216)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (216)
...+.++|..+-
T Consensus 130 -dg~l~AlDa~TG 141 (689)
T 1yiq_A 130 -DGRLEAIDAKTG 141 (689)
T ss_dssp -TSEEEEEETTTC
T ss_pred -CCEEEEEECCCC
Confidence 246899998865
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=78.81 E-value=21 Score=27.70 Aligned_cols=91 Identities=12% Similarity=0.160 Sum_probs=52.3
Q ss_pred ccEEEEeccCCccccce-EEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCC
Q 027962 11 GDTWVLELSENFCFGSW-QQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 89 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W-~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 89 (216)
+.+..+|+++. += .++ +++..-.+..++.. ++++|+.-.. .+.++.||+++ .+-..
T Consensus 65 S~v~~vD~~Tg----kv~~~~---~l~~~~FgeGit~~-g~~ly~ltw~------~~~v~v~D~~t--~~~~~------- 121 (262)
T 3nol_A 65 SSIRKVDIESG----KTLQQI---ELGKRYFGEGISDW-KDKIVGLTWK------NGLGFVWNIRN--LRQVR------- 121 (262)
T ss_dssp EEEEEECTTTC----CEEEEE---ECCTTCCEEEEEEE-TTEEEEEESS------SSEEEEEETTT--CCEEE-------
T ss_pred ceEEEEECCCC----cEEEEE---ecCCccceeEEEEe-CCEEEEEEee------CCEEEEEECcc--CcEEE-------
Confidence 46888999985 32 222 23333344456666 5799998544 25689999987 44321
Q ss_pred CCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 90 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
..+.+-.+.+.+. .++.||+.-| .+.++.+|+.+.
T Consensus 122 ---ti~~~~eG~glt~-dg~~L~~SdG-------s~~i~~iDp~T~ 156 (262)
T 3nol_A 122 ---SFNYDGEGWGLTH-NDQYLIMSDG-------TPVLRFLDPESL 156 (262)
T ss_dssp ---EEECSSCCCCEEE-CSSCEEECCS-------SSEEEEECTTTC
T ss_pred ---EEECCCCceEEec-CCCEEEEECC-------CCeEEEEcCCCC
Confidence 1222224445555 6667777544 234666666543
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=77.37 E-value=24 Score=27.59 Aligned_cols=102 Identities=8% Similarity=-0.029 Sum_probs=52.1
Q ss_pred ccEEEEeccCCccccceE-EcccCCCCC-CCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcC
Q 027962 11 GDTWVLELSENFCFGSWQ-QLVTHPSPP-ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQ 88 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~-~~~~~~~p~-~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~ 88 (216)
+.+.++|+++. +-. .++.+.... ...-+.++.- ++++|+..- + ..+.+.++|+.+ .+....-
T Consensus 105 ~~v~~iD~~t~----~~~~~i~~g~~~~~~~~p~~i~~~-~~~lyv~~~-~----~~~~v~viD~~t--~~~~~~i---- 168 (328)
T 3dsm_A 105 YRIFIINPKTY----EITGYIECPDMDMESGSTEQMVQY-GKYVYVNCW-S----YQNRILKIDTET--DKVVDEL---- 168 (328)
T ss_dssp SEEEEEETTTT----EEEEEEECTTCCTTTCBCCCEEEE-TTEEEEEEC-T----TCCEEEEEETTT--TEEEEEE----
T ss_pred CeEEEEECCCC----eEEEEEEcCCccccCCCcceEEEE-CCEEEEEcC-C----CCCEEEEEECCC--CeEEEEE----
Confidence 57888999885 332 232222100 0022233344 678998842 0 124689999988 6544321
Q ss_pred CCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCC----CCceEEEecCC
Q 027962 89 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR----KDDFWVLDTKA 134 (216)
Q Consensus 89 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~----~~~~~~~~~~~ 134 (216)
..+..| +...+..++++|+..--...... .+.++++|+.+
T Consensus 169 -~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 169 -TIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp -ECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred -EcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 012222 23333366888776422111111 36789999873
No 25
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=76.93 E-value=39 Score=29.79 Aligned_cols=77 Identities=14% Similarity=0.063 Sum_probs=42.9
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR 122 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~ 122 (216)
+-++. ++.+|+.... +.++.+|..+++..|+.-..................+.++ .+++||+-..
T Consensus 72 ~P~v~-~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~------ 136 (677)
T 1kb0_A 72 TPVVV-DGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAW------ 136 (677)
T ss_dssp CCEEE-TTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECT------
T ss_pred CCEEE-CCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcC------
Confidence 34455 5788887542 4589999998888898752000000000000111223344 7888877421
Q ss_pred CCCceEEEecCCC
Q 027962 123 RKDDFWVLDTKAI 135 (216)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (216)
...++++|..+-
T Consensus 137 -dg~l~alD~~tG 148 (677)
T 1kb0_A 137 -DGRLIALDAATG 148 (677)
T ss_dssp -TSEEEEEETTTC
T ss_pred -CCEEEEEECCCC
Confidence 256899998865
No 26
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=69.94 E-value=58 Score=28.66 Aligned_cols=106 Identities=11% Similarity=0.050 Sum_probs=57.5
Q ss_pred ccEEEEeccCCccccceEEcccCCC---CC---CCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEec
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPS---PP---ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 84 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~---p~---~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~ 84 (216)
+.++.+|.++. +..|+.-..... +. .......++. ++.+|+.... ..++.+|..+++..|+.-.
T Consensus 87 ~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~~~d-------g~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 87 SVVHAIDTRTG--NRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAWD-------GRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp GCEEEEETTTT--EEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECTT-------SEEEEEETTTCCEEEEEET
T ss_pred CeEEEEECCCC--cEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEEcCC-------CEEEEEECCCCCEEeeecC
Confidence 57899999863 357876431110 00 0112233344 5677765321 3589999998778898763
Q ss_pred cCcCCCCC-CCCC-CCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 85 YELQNIPA-GFSL-PRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 85 ~~~~~~~~-~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
. +.+. .....+.++ .++.+|+-.+..+ ......+.++|..+-
T Consensus 157 -------~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~-~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 157 -------FEGQKGSLTITGAPRV-FKGKVIIGNGGAE-YGVRGYITAYDAETG 200 (677)
T ss_dssp -------TTTCCSSCBCCSCCEE-ETTEEEECCBCTT-TCCBCEEEEEETTTC
T ss_pred -------CcCcCcCcccccCcEE-ECCEEEEEecccc-cCCCCEEEEEECCCC
Confidence 1 1111 111222334 7787776433221 223567899998765
No 27
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=66.53 E-value=58 Score=27.39 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=25.2
Q ss_pred EEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEc
Q 027962 13 TWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFG 56 (216)
Q Consensus 13 ~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~G 56 (216)
-|.+-..-. ...|++...+..|....-|+.+.|+ +.-|.+|
T Consensus 260 ~W~~~T~F~--~spW~~t~L~~i~~vTe~HSFa~i~-~~~fa~G 300 (670)
T 3ju4_A 260 NWHMGTSFH--KSPWRKTDLGLIPSVTEVHSFATID-NNGFAMG 300 (670)
T ss_dssp EEEEEECST--TSCCEEEECCSCTTCSEEEEEEECS-SSCEEEE
T ss_pred eeeeeeeec--cCCceecccccccceeeeeeeeEec-CCceEEE
Confidence 555554421 2378877666666666778899984 4444554
No 28
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=65.16 E-value=66 Score=27.60 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=43.5
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEec-CCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV-YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR 121 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~ 121 (216)
+-++. ++.+|+.... .+.++.+|. .+++..|+.-..........+.+.....+.++ .+++||+...
T Consensus 57 ~P~v~-~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~----- 123 (571)
T 2ad6_A 57 APLVI-GDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQA----- 123 (571)
T ss_dssp CCEEE-TTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECT-----
T ss_pred ccEEE-CCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEeC-----
Confidence 34455 6789888652 135899999 88888898752000000000000111223345 7888887532
Q ss_pred CCCCceEEEecCCC
Q 027962 122 RRKDDFWVLDTKAI 135 (216)
Q Consensus 122 ~~~~~~~~~~~~~~ 135 (216)
...++++|..+-
T Consensus 124 --dg~l~alD~~tG 135 (571)
T 2ad6_A 124 --NGHLLALDAKTG 135 (571)
T ss_dssp --TSEEEEEETTTC
T ss_pred --CCEEEEEECCCC
Confidence 246899998765
No 29
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=64.87 E-value=72 Score=27.94 Aligned_cols=106 Identities=11% Similarity=0.095 Sum_probs=56.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCCC------CCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEec
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPP------ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 84 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~------~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~ 84 (216)
+.++.+|.++. +..|+.-....... .......++. ++.+|+.... ..++.+|..+++..|+.-.
T Consensus 76 ~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~d-------g~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 76 SRVIAVDAASG--KELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVGTLD-------GRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp GEEEEEETTTC--CEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEECTT-------SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCC--hhceEECCCCCccccccccccCCccceEEE-CCEEEEEcCC-------CEEEEEECCCCCEeeeecc
Confidence 46888998763 34788642111000 0011223344 4677765321 3589999998888898763
Q ss_pred cCcCCCCCCCC-CCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 85 YELQNIPAGFS-LPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 85 ~~~~~~~~~~p-~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
.+.+ ......+.++ .++.+|+-.+. ........++++|+.+-
T Consensus 146 -------~~~~~~~~~~~~P~v-~~~~v~vg~~~-~~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 146 -------TDPAKPYSITGAPRV-VKGKVIIGNGG-AEYGVRGFVSAYDADTG 188 (668)
T ss_dssp -------SCTTSSCBCCSCCEE-ETTEEEECCBC-TTTCCBCEEEEEETTTC
T ss_pred -------CCCCCcceecCCCEE-ECCEEEEeCCC-CCcCCCCEEEEEECCCC
Confidence 1111 1112223344 77877763222 11224567899998765
No 30
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=62.48 E-value=62 Score=26.31 Aligned_cols=18 Identities=11% Similarity=0.065 Sum_probs=14.1
Q ss_pred cCceEEEEcCCeEEEEcc
Q 027962 40 SGHSLTRIGGNRTVLFGG 57 (216)
Q Consensus 40 ~~h~~~~~~~~~iyv~GG 57 (216)
..|+++...++++|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 467877777788999983
No 31
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=58.71 E-value=96 Score=27.30 Aligned_cols=106 Identities=9% Similarity=0.053 Sum_probs=56.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCC---C---CCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEec
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSP---P---ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 84 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p---~---~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~ 84 (216)
+.++.+|.++. +..|+.-...... . .....+.++. ++.+|+-... ..++.+|.++++..|+.-.
T Consensus 80 ~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~d-------g~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 80 SVVYALDARDG--RLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLD-------GRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp GCEEEEETTTC--CEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTT-------SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCC--ceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEccC-------CEEEEEECCCCCEeeeecC
Confidence 56899999863 3578764211100 0 0011223344 5677665321 3589999998888898763
Q ss_pred cCcCCCCC-CCCC-CCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 85 YELQNIPA-GFSL-PRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 85 ~~~~~~~~-~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
. +... .....+.++ .++.+|+-.+.. .......++++|+.+-
T Consensus 150 -------~~~~~~~~~~~~sP~v-~~g~v~vg~~~~-~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 150 -------RADHKRSYTITGAPRV-VNGKVVIGNGGA-EFGVRGYVTAYDAETG 193 (689)
T ss_dssp -------CSCTTSCCBCCSCCEE-ETTEEEECCBCT-TTCCBCEEEEEETTTC
T ss_pred -------cCCCCCCccccCCcEE-ECCEEEEEeCCC-ccCCCCEEEEEECCCC
Confidence 1 1111 111223344 788777632221 1223567899998865
No 32
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=57.91 E-value=75 Score=25.80 Aligned_cols=18 Identities=11% Similarity=0.074 Sum_probs=13.9
Q ss_pred cCceEEEEcCCeEEEEcc
Q 027962 40 SGHSLTRIGGNRTVLFGG 57 (216)
Q Consensus 40 ~~h~~~~~~~~~iyv~GG 57 (216)
..|+++...++++|.+|-
T Consensus 234 ~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 234 WRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTCCEEEEEC
T ss_pred CCcEEEEcCCCCEEEeeC
Confidence 457777777788999983
No 33
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=56.40 E-value=96 Score=26.59 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=56.1
Q ss_pred ccEEEEec-cCCccccceEEcccCCCC-C--C---CcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 11 GDTWVLEL-SENFCFGSWQQLVTHPSP-P--A---RSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 11 ~~~~~~d~-~~~~~~~~W~~~~~~~~p-~--~---r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
+.+++||. ++. +..|+.-...... . + ......++. ++.+|+.... ..++.+|..+++..|+.-
T Consensus 73 ~~v~AlD~~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~d-------g~l~alD~~tG~~~W~~~ 142 (571)
T 2ad6_A 73 NNTYALNLNDPG--KIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQAN-------GHLLALDAKTGKINWEVE 142 (571)
T ss_dssp TCEEEEETTCTT--SEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTT-------SEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCCc--cEEEEEcCCCCccccccccccccccccEEE-CCEEEEEeCC-------CEEEEEECCCCCEEEEec
Confidence 46899998 653 2578864211100 0 0 111233444 5677776321 358999998877889865
Q ss_pred ccCcCCCCCCCCCC-CCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 84 PYELQNIPAGFSLP-RVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 84 ~~~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
. ...+.. ....+.++ .++.+|+-.+..+ ......++++|+.+-
T Consensus 143 ~-------~~~~~~~~~~~~P~v-~~g~v~vg~~~~~-~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 143 V-------CDPKVGSTLTQAPFV-AKDTVLMGCSGAE-LGVRGAVNAFDLKTG 186 (571)
T ss_dssp C-------CCGGGTCBCCSCCEE-ETTEEEEECBCGG-GTCCCEEEEEETTTC
T ss_pred C-------CCCCccceeccCCEE-ECCEEEEEecCCc-cCCCCEEEEEECCCC
Confidence 2 111111 11122334 6787776433211 123467889998754
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=56.28 E-value=71 Score=25.04 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=52.8
Q ss_pred ccEEEEeccCCccccceEEcccCCCC-----CCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEecc
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSP-----PARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPY 85 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p-----~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~ 85 (216)
..+++||.++. +..|+........ .... .+...+.++.+|+.... ..++.+|.++++..|+.-.
T Consensus 63 g~v~a~d~~tG--~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~- 131 (376)
T 3q7m_A 63 GLVKALNADDG--KEIWSVSLAEKDGWFSKEPALL-SGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKV- 131 (376)
T ss_dssp SEEEEEETTTC--CEEEEEECCC---CCSCCCCCE-EEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEEC-
T ss_pred CeEEEEEccCC--ceeeeecCccccccccccCccc-ccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeC-
Confidence 36889999763 2468754211100 1111 23333435677775322 3689999988778897652
Q ss_pred CcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 86 ELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 86 ~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
.. + .....++ .++.+|+-.. ...++++|+.+.
T Consensus 132 ------~~-~---~~~~p~~-~~~~v~v~~~-------~g~l~~~d~~tG 163 (376)
T 3q7m_A 132 ------AG-E---ALSRPVV-SDGLVLIHTS-------NGQLQALNEADG 163 (376)
T ss_dssp ------SS-C---CCSCCEE-ETTEEEEECT-------TSEEEEEETTTC
T ss_pred ------CC-c---eEcCCEE-ECCEEEEEcC-------CCeEEEEECCCC
Confidence 11 1 1122234 6777777322 236888998754
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=54.75 E-value=68 Score=24.40 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=46.7
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR 122 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~ 122 (216)
.+... ++.+|+..|... -+.+..+|+++ .+=..- -.+|...++.+.+. .+++||+....
T Consensus 25 GL~~~-~~~LyestG~~g----~S~v~~vD~~t--gkv~~~--------~~l~~~~fgeGi~~-~~~~ly~ltw~----- 83 (243)
T 3mbr_X 25 GLFYL-RGHLYESTGETG----RSSVRKVDLET--GRILQR--------AEVPPPYFGAGIVA-WRDRLIQLTWR----- 83 (243)
T ss_dssp EEEEE-TTEEEEEECCTT----SCEEEEEETTT--CCEEEE--------EECCTTCCEEEEEE-ETTEEEEEESS-----
T ss_pred cEEEE-CCEEEEECCCCC----CceEEEEECCC--CCEEEE--------EeCCCCcceeEEEE-eCCEEEEEEee-----
Confidence 44545 578999887631 25688999998 544333 23444455666666 88999997543
Q ss_pred CCCceEEEecCC
Q 027962 123 RKDDFWVLDTKA 134 (216)
Q Consensus 123 ~~~~~~~~~~~~ 134 (216)
.+.+++||+.+
T Consensus 84 -~~~v~v~D~~t 94 (243)
T 3mbr_X 84 -NHEGFVYDLAT 94 (243)
T ss_dssp -SSEEEEEETTT
T ss_pred -CCEEEEEECCc
Confidence 36789999874
No 36
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=51.35 E-value=78 Score=24.09 Aligned_cols=105 Identities=6% Similarity=-0.000 Sum_probs=50.1
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 90 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 90 (216)
..++++|+++. +...+.. . .+..-++++.-.++++|+..... ......++++|+.+ .+...+.
T Consensus 66 ~~i~~~d~~~~----~~~~~~~--~-~~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~--~~~~~~~------ 128 (333)
T 2dg1_A 66 GNIFKINPETK----EIKRPFV--S-HKANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENG--DNLQDII------ 128 (333)
T ss_dssp CEEEEECTTTC----CEEEEEE--C-SSSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTS--CSCEEEE------
T ss_pred CEEEEEeCCCC----cEEEEee--C-CCCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCC--CEEEEEE------
Confidence 35777787764 5554421 1 11112233333456777765331 11235689999887 5544331
Q ss_pred CCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 91 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 91 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
........-...++..++++|+.............+++++..
T Consensus 129 -~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 129 -EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp -CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred -ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 111111112233333567787754321111223567888766
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=51.18 E-value=55 Score=25.41 Aligned_cols=90 Identities=9% Similarity=-0.016 Sum_probs=51.6
Q ss_pred cEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCC
Q 027962 12 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 91 (216)
Q Consensus 12 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~ 91 (216)
.+..+|+++. +=.+- - ++..-.+..++.. ++++|+.... .+.++.||+++ .+-..-
T Consensus 76 ~v~~iD~~Tg----kv~~~--~-l~~~~FgeGit~~-g~~Ly~ltw~------~~~v~V~D~~T--l~~~~t-------- 131 (268)
T 3nok_A 76 TLRQLSLESA----QPVWM--E-RLGNIFAEGLASD-GERLYQLTWT------EGLLFTWSGMP--PQRERT-------- 131 (268)
T ss_dssp EEEECCSSCS----SCSEE--E-ECTTCCEEEEEEC-SSCEEEEESS------SCEEEEEETTT--TEEEEE--------
T ss_pred EEEEEECCCC----cEEeE--E-CCCCcceeEEEEe-CCEEEEEEcc------CCEEEEEECCc--CcEEEE--------
Confidence 3778888874 22111 1 2222334445555 5789998544 25689999988 443221
Q ss_pred CCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 92 AGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 92 ~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
.+.+-.+.+.+. .++.||+.-| .+.++.+|+++.
T Consensus 132 --i~~~~eGwGLt~-Dg~~L~vSdG-------s~~l~~iDp~T~ 165 (268)
T 3nok_A 132 --TRYSGEGWGLCY-WNGKLVRSDG-------GTMLTFHEPDGF 165 (268)
T ss_dssp --EECSSCCCCEEE-ETTEEEEECS-------SSEEEEECTTTC
T ss_pred --EeCCCceeEEec-CCCEEEEECC-------CCEEEEEcCCCC
Confidence 222233455555 7788898755 235666776643
No 38
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.53 E-value=1.2e+02 Score=26.04 Aligned_cols=75 Identities=12% Similarity=0.019 Sum_probs=43.0
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCC
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR 122 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~ 122 (216)
+-++. ++.+|+....+ .++.+|..+++..|+.-.... ....+.+.....+.++ .+++||+...
T Consensus 63 ~P~v~-~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~--~~~~~~~~~~~~g~a~-~~~~v~~~t~------ 125 (582)
T 1flg_A 63 QAIVS-DGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLP--DDIRPCCDVVNRGAAI-YGDKVFFGTL------ 125 (582)
T ss_dssp CCEEE-TTEEEEEETTT-------EEEEEESSSCCEEEEEECCCC--TTCCCSSCSCCCCCEE-ETTEEEEEET------
T ss_pred ccEEE-CCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCC--cccccccccCCCccEE-ECCEEEEEeC------
Confidence 34455 67888876531 389999998888998752000 0000001111123344 7888877421
Q ss_pred CCCceEEEecCCC
Q 027962 123 RKDDFWVLDTKAI 135 (216)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (216)
...++++|..+-
T Consensus 126 -dg~l~AlD~~TG 137 (582)
T 1flg_A 126 -DASVVALNKNTG 137 (582)
T ss_dssp -TTEEEEEESSSC
T ss_pred -CCEEEEEECCCC
Confidence 256899998866
No 39
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=46.20 E-value=1e+02 Score=23.88 Aligned_cols=62 Identities=8% Similarity=-0.103 Sum_probs=39.2
Q ss_pred CCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceE
Q 027962 49 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFW 128 (216)
Q Consensus 49 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 128 (216)
++.+|+..|... .+..+|+++ .+=..- - .+..-++.+.+. .+++||+.... -+.++
T Consensus 64 ~~~Ly~stG~~g------~v~~iD~~T--gkv~~~--------~-l~~~~FgeGit~-~g~~Ly~ltw~------~~~v~ 119 (268)
T 3nok_A 64 QGHFFESTGHQG------TLRQLSLES--AQPVWM--------E-RLGNIFAEGLAS-DGERLYQLTWT------EGLLF 119 (268)
T ss_dssp TTEEEEEETTTT------EEEECCSSC--SSCSEE--------E-ECTTCCEEEEEE-CSSCEEEEESS------SCEEE
T ss_pred CCEEEEEcCCCC------EEEEEECCC--CcEEeE--------E-CCCCcceeEEEE-eCCEEEEEEcc------CCEEE
Confidence 567888877631 288899988 432222 1 233334455666 88899997443 36789
Q ss_pred EEecCC
Q 027962 129 VLDTKA 134 (216)
Q Consensus 129 ~~~~~~ 134 (216)
+||+++
T Consensus 120 V~D~~T 125 (268)
T 3nok_A 120 TWSGMP 125 (268)
T ss_dssp EEETTT
T ss_pred EEECCc
Confidence 999874
No 40
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=43.92 E-value=1.2e+02 Score=24.27 Aligned_cols=96 Identities=10% Similarity=0.113 Sum_probs=48.9
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEE-cCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 89 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 89 (216)
..++++|+++. +..++... . ..-..+.. .+++.++++... .. ...+|.+|+.+ .+-..+.
T Consensus 247 ~~i~~~d~~~~----~~~~l~~~----~-~~~~~~~~spdg~~l~~~s~~-~g--~~~i~~~d~~~--~~~~~l~----- 307 (415)
T 2hqs_A 247 LNLYVMDLASG----QIRQVTDG----R-SNNTEPTWFPDSQNLAFTSDQ-AG--RPQVYKVNING--GAPQRIT----- 307 (415)
T ss_dssp CEEEEEETTTC----CEEECCCC----S-SCEEEEEECTTSSEEEEEECT-TS--SCEEEEEETTS--SCCEECC-----
T ss_pred ceEEEEECCCC----CEEeCcCC----C-CcccceEECCCCCEEEEEECC-CC--CcEEEEEECCC--CCEEEEe-----
Confidence 35888898874 55544211 1 11222233 345555555431 11 34689999988 5544442
Q ss_pred CCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 90 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
. . ...........+++.+++++... + ...++++|+.
T Consensus 308 --~--~-~~~~~~~~~spdG~~l~~~~~~~-g--~~~i~~~d~~ 343 (415)
T 2hqs_A 308 --W--E-GSQNQDADVSSDGKFMVMVSSNG-G--QQHIAKQDLA 343 (415)
T ss_dssp --C--S-SSEEEEEEECTTSSEEEEEEECS-S--CEEEEEEETT
T ss_pred --c--C-CCcccCeEECCCCCEEEEEECcC-C--ceEEEEEECC
Confidence 1 1 11111222225666666665432 1 4578889987
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=42.91 E-value=1.2e+02 Score=23.89 Aligned_cols=97 Identities=7% Similarity=-0.109 Sum_probs=45.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCc--eeCcEEEEecCCCCccEEEeccCcC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYE--VLNDVWFLDVYEGFFKWVQIPYELQ 88 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~--~~~~~~~~d~~~~~~~W~~~~~~~~ 88 (216)
+.+.++|+++. +..... . ....-..++...+++.+++++...... .-..+++||+.+ .+-....
T Consensus 234 ~~i~~~d~~~~----~~~~~~--~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~~~~~~~---- 299 (433)
T 3bws_A 234 EDISVIDRKTK----LEIRKT--D--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK--EKLIDTI---- 299 (433)
T ss_dssp TEEEEEETTTT----EEEEEC--C--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT--TEEEEEE----
T ss_pred CcEEEEECCCC----cEEEEe--c--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC--CcEEeec----
Confidence 46788888774 333221 1 111122333333455555555422111 134688999887 5433321
Q ss_pred CCCCCCCCCCCCceEEEEeCC-EEEEEeCcCCCCCCCCceEEEecC
Q 027962 89 NIPAGFSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 89 ~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
. .+. .....+...++ .+|+.++.+ ..+.++|+.
T Consensus 300 ---~-~~~--~~~~~~~~~~g~~l~~~~~~~------~~v~v~d~~ 333 (433)
T 3bws_A 300 ---G-PPG--NKRHIVSGNTENKIYVSDMCC------SKIEVYDLK 333 (433)
T ss_dssp ---E-EEE--CEEEEEECSSTTEEEEEETTT------TEEEEEETT
T ss_pred ---c-CCC--CcceEEECCCCCEEEEEecCC------CEEEEEECC
Confidence 0 011 11122222344 677766543 467888887
No 42
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.91 E-value=1.1e+02 Score=23.56 Aligned_cols=62 Identities=6% Similarity=-0.033 Sum_probs=32.2
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEc-CCe-EEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNR-TVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
..++++|+++. ....+.. ............ ++. |++.. .+........++.+++.. .++..+
T Consensus 168 ~~l~~~d~~~g----~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~-~~~~~~~~~~l~~~d~~~--~~~~~l 231 (396)
T 3c5m_A 168 CRLIKVDIETG----ELEVIHQ----DTAWLGHPIYRPFDDSTVGFCH-EGPHDLVDARMWLVNEDG--SNVRKI 231 (396)
T ss_dssp EEEEEEETTTC----CEEEEEE----ESSCEEEEEEETTEEEEEEEEE-CSCSSSCSCCCEEEETTS--CCCEES
T ss_pred ceEEEEECCCC----cEEeecc----CCcccccceECCCCCCEEEEEe-cCCCCCCCceEEEEECCC--CceeEe
Confidence 47888999874 5555531 111111222222 234 44333 221222235799999987 767766
No 43
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=42.76 E-value=1.1e+02 Score=23.48 Aligned_cols=66 Identities=11% Similarity=0.025 Sum_probs=42.8
Q ss_pred CCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceE
Q 027962 49 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFW 128 (216)
Q Consensus 49 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 128 (216)
++.+|+..|.. . -+.+.++|+++ .+=..- -.++...++.+.+. .+++||+.-.. .+.++
T Consensus 52 ~~~LyestG~~-g---~S~v~~vD~~T--gkv~~~--------~~l~~~~FgeGit~-~g~~ly~ltw~------~~~v~ 110 (262)
T 3nol_A 52 NGYFYESTGLN-G---RSSIRKVDIES--GKTLQQ--------IELGKRYFGEGISD-WKDKIVGLTWK------NGLGF 110 (262)
T ss_dssp TTEEEEEEEET-T---EEEEEEECTTT--CCEEEE--------EECCTTCCEEEEEE-ETTEEEEEESS------SSEEE
T ss_pred CCEEEEECCCC-C---CceEEEEECCC--CcEEEE--------EecCCccceeEEEE-eCCEEEEEEee------CCEEE
Confidence 57888888763 1 24688999998 544332 12333334455566 88999998443 35789
Q ss_pred EEecCCC
Q 027962 129 VLDTKAI 135 (216)
Q Consensus 129 ~~~~~~~ 135 (216)
+||+.+.
T Consensus 111 v~D~~t~ 117 (262)
T 3nol_A 111 VWNIRNL 117 (262)
T ss_dssp EEETTTC
T ss_pred EEECccC
Confidence 9998753
No 44
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=42.40 E-value=1.7e+02 Score=25.39 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=40.7
Q ss_pred cEEEEeccCCc-cccceEEcc--cCCCCCCCcCceEEEEcCCe-EEEEc-cCCCCCceeCcEEEEecCCCCccEE
Q 027962 12 DTWVLELSENF-CFGSWQQLV--THPSPPARSGHSLTRIGGNR-TVLFG-GRGVGYEVLNDVWFLDVYEGFFKWV 81 (216)
Q Consensus 12 ~~~~~d~~~~~-~~~~W~~~~--~~~~p~~r~~h~~~~~~~~~-iyv~G-G~~~~~~~~~~~~~~d~~~~~~~W~ 81 (216)
.+|.+|+.+.. ....|+.-. ...+..-...-.++.+.+++ +.||| |+.. ..--..||.+|+.++...|.
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~-~~~~~~Lyv~d~~tG~li~~ 238 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSS-MNDKAALLIIDMETGAITRK 238 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSC-TTCCEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCC-CCCccEEEEEECCCCceEEE
Confidence 67888887632 256788653 12343444445566664334 66665 5542 23345799999998655554
No 45
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=41.70 E-value=90 Score=23.89 Aligned_cols=68 Identities=15% Similarity=-0.013 Sum_probs=31.7
Q ss_pred EEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEe
Q 027962 52 TVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLD 131 (216)
Q Consensus 52 iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 131 (216)
.+++|.+.......-.+|.+|..+ .+++.+. .......+ ...++..+++||+.+... ....+++++
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~t--g~~~~~~-----~~~~~~~p---~~~a~spdg~l~~~~~~~----~~~~v~~~~ 69 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTA--KTLTNDG-----LLAATQNP---TYLALSAKDCLYSVDKED----DEGGIAAWQ 69 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTT--TEEEEEE-----EEEECSCC---CCEEECTTCEEEEEEEET----TEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCC--CeEEEee-----eeeccCCc---ceEEEccCCeEEEEEecC----CCceEEEEE
Confidence 344555532222122366677777 6666542 00111111 123332677766654321 124678888
Q ss_pred cC
Q 027962 132 TK 133 (216)
Q Consensus 132 ~~ 133 (216)
+.
T Consensus 70 ~~ 71 (347)
T 3hfq_A 70 ID 71 (347)
T ss_dssp EE
T ss_pred ec
Confidence 76
No 46
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=41.44 E-value=1.2e+02 Score=23.30 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=51.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEE-EeccCcCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWV-QIPYELQN 89 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~-~~~~~~~~ 89 (216)
+.+..+|+++. +=... -+++....+..++.. ++++|+..-. .+.++.+|..+ .+=. .+.
T Consensus 44 s~v~~iD~~tg----~v~~~--i~l~~~~fgeGi~~~-g~~lyv~t~~------~~~v~viD~~t--~~v~~~i~----- 103 (266)
T 2iwa_A 44 SSVRQVALQTG----KVENI--HKMDDSYFGEGLTLL-NEKLYQVVWL------KNIGFIYDRRT--LSNIKNFT----- 103 (266)
T ss_dssp CEEEEEETTTC----CEEEE--EECCTTCCEEEEEEE-TTEEEEEETT------CSEEEEEETTT--TEEEEEEE-----
T ss_pred CEEEEEECCCC----CEEEE--EecCCCcceEEEEEe-CCEEEEEEec------CCEEEEEECCC--CcEEEEEE-----
Confidence 57888999985 32221 112222233445555 5789998533 35689999987 4322 221
Q ss_pred CCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 90 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
.+ .| .+.+.+. .++++|+.-| .+.+..+|+.+.
T Consensus 104 -~g-~~---~g~glt~-Dg~~l~vs~g-------s~~l~viD~~t~ 136 (266)
T 2iwa_A 104 -HQ-MK---DGWGLAT-DGKILYGSDG-------TSILYEIDPHTF 136 (266)
T ss_dssp -CC-SS---SCCEEEE-CSSSEEEECS-------SSEEEEECTTTC
T ss_pred -CC-CC---CeEEEEE-CCCEEEEECC-------CCeEEEEECCCC
Confidence 11 12 2333444 5677887633 367889998743
No 47
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=40.64 E-value=1.2e+02 Score=23.23 Aligned_cols=72 Identities=15% Similarity=0.027 Sum_probs=43.8
Q ss_pred ceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCC
Q 027962 42 HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR 121 (216)
Q Consensus 42 h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~ 121 (216)
+.+..-+++.+|+..|... .+.+..+|+.+ .+=... -..+....+...+. .+++||+..-.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~t--g~v~~~--------i~l~~~~fgeGi~~-~g~~lyv~t~~---- 84 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQT--GKVENI--------HKMDDSYFGEGLTL-LNEKLYQVVWL---- 84 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTT--CCEEEE--------EECCTTCCEEEEEE-ETTEEEEEETT----
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCC--CCEEEE--------EecCCCcceEEEEE-eCCEEEEEEec----
Confidence 4455544478999876411 25689999998 543332 11222223345555 78899997432
Q ss_pred CCCCceEEEecCC
Q 027962 122 RRKDDFWVLDTKA 134 (216)
Q Consensus 122 ~~~~~~~~~~~~~ 134 (216)
.+.++++|+.+
T Consensus 85 --~~~v~viD~~t 95 (266)
T 2iwa_A 85 --KNIGFIYDRRT 95 (266)
T ss_dssp --CSEEEEEETTT
T ss_pred --CCEEEEEECCC
Confidence 46789999873
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=40.60 E-value=1.3e+02 Score=23.66 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=48.3
Q ss_pred cEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCC
Q 027962 12 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 91 (216)
Q Consensus 12 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~ 91 (216)
.+|.+|+++. .++.+.. .+.+..-.++....++.+++.++.+ ..+.++|+.+ .+..... ..
T Consensus 102 ~l~~~d~~~~----~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~--g~~~~~~-----~~ 162 (433)
T 3bws_A 102 KLIALDKEGI----THRFISR--FKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINS--GQTVRLS-----PP 162 (433)
T ss_dssp CEEECCBTTC----SEEEEEE--EECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTT--CCEEEEC-----CC
T ss_pred EEEEECCCCC----cceEEEE--EcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCC--CeEeeec-----Cc
Confidence 6777777653 4444331 1111112233333345677776553 3488999988 5554431 00
Q ss_pred CCCCCCCCC-ceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCC
Q 027962 92 AGFSLPRVG-HSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 134 (216)
Q Consensus 92 ~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 134 (216)
......... .+.....++.+++.++.+ ..+.++|+.+
T Consensus 163 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~ 200 (433)
T 3bws_A 163 EKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKT 200 (433)
T ss_dssp HHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTT
T ss_pred ccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCC
Confidence 000011111 112222567888877643 4578888773
No 49
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=39.97 E-value=62 Score=25.76 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=19.3
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
+..++.++.+|+- ... ..++.+|..+++..|+.-
T Consensus 3 ssP~v~~~~v~~g-s~d------g~v~a~d~~tG~~~W~~~ 36 (369)
T 2hz6_A 3 STVTLPETLLFVS-TLD------GSLHAVSKRTGSIKWTLK 36 (369)
T ss_dssp -----CTTEEEEE-ETT------SEEEEEETTTCCEEEEEE
T ss_pred CCCeeeCCEEEEE-cCC------CEEEEEECCCCCEEEEec
Confidence 3444534455554 331 258999998877889876
No 50
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=39.11 E-value=1.9e+02 Score=24.88 Aligned_cols=59 Identities=15% Similarity=0.112 Sum_probs=36.5
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
..+..+|+++. +..|+... +.+..+..++.- ++.+|+ |.. + ..++.||.++++..|+..
T Consensus 466 G~l~A~D~~tG--~~~W~~~~----~~~~~~g~~~ta-gglvf~-g~~--d----g~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 466 GSLRAMDPVSG--KVVWEHKE----HLPLWAGVLATA-GNLVFT-GTG--D----GYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp EEEEEECTTTC--CEEEEEEE----SSCCCSCCEEET-TTEEEE-ECT--T----SEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCC--CEEEEecC----CCCCcccceEeC-CCEEEE-ECC--C----CcEEEEECCCCCEEEEec
Confidence 56888999874 24687642 223333344443 455555 432 1 358899999877889876
No 51
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=36.98 E-value=2.1e+02 Score=24.80 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=54.5
Q ss_pred ccEEEEec-cCCccccceEEcccCCC---CCC---CcCceEEE--EcCCe----EEEEccCCCCCceeCcEEEEecCCCC
Q 027962 11 GDTWVLEL-SENFCFGSWQQLVTHPS---PPA---RSGHSLTR--IGGNR----TVLFGGRGVGYEVLNDVWFLDVYEGF 77 (216)
Q Consensus 11 ~~~~~~d~-~~~~~~~~W~~~~~~~~---p~~---r~~h~~~~--~~~~~----iyv~GG~~~~~~~~~~~~~~d~~~~~ 77 (216)
+.+++||. ++. +..|+.-..... +.+ ......++ . ++. ||+.... ..++.+|.++++
T Consensus 73 ~~v~AlD~~~tG--~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~-~g~~~~rV~v~t~d-------g~l~AlDa~TG~ 142 (599)
T 1w6s_A 73 NNTFALGLDDPG--TILWQDKPKQNPAARAVACCDLVNRGLAYWPG-DGKTPALILKTQLD-------GNVAALNAETGE 142 (599)
T ss_dssp TCEEEEETTCTT--SEEEEECCCCCGGGGGGCSSCSCCCCCEEECC-CSSSCCEEEEECTT-------SEEEEEETTTCC
T ss_pred CEEEEEeCCCCC--cEEEEECCCCCccccccccccccccceEEEec-CCcceeEEEEEcCC-------CEEEEEECCCCC
Confidence 46899999 653 357886431110 000 11122333 3 455 6664221 358999999888
Q ss_pred ccEEEeccCcCCCCCCCCCC-CCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCCC
Q 027962 78 FKWVQIPYELQNIPAGFSLP-RVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 135 (216)
Q Consensus 78 ~~W~~~~~~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 135 (216)
..|+.-. ...... ....+.++ .++.||+-.+.. +......+.+||..+-
T Consensus 143 ~~W~~~~-------~~~~~~~~~~ssP~v-~~g~V~vg~~g~-e~g~~g~v~A~D~~TG 192 (599)
T 1w6s_A 143 TVWKVEN-------SDIKVGSTLTIAPYV-VKDKVIIGSSGA-ELGVRGYLTAYDVKTG 192 (599)
T ss_dssp EEEEEEC-------CCGGGTCBCCSCCEE-ETTEEEECCBCG-GGTCCCEEEEEETTTC
T ss_pred EEEeecC-------CCCCccceeecCCEE-ECCEEEEEeccc-ccCCCCeEEEEECCCC
Confidence 8898652 111111 11122234 677776633211 1123467889998754
No 52
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=33.33 E-value=2.5e+02 Score=24.70 Aligned_cols=93 Identities=8% Similarity=0.012 Sum_probs=46.9
Q ss_pred cEEEEeccCCccccceEEcccCCCCCCCcCceEEEE-cCCeEEEEccCCCCCceeCcE-EEEecCCCCccEEEeccCcCC
Q 027962 12 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDV-WFLDVYEGFFKWVQIPYELQN 89 (216)
Q Consensus 12 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~-~~~~iyv~GG~~~~~~~~~~~-~~~d~~~~~~~W~~~~~~~~~ 89 (216)
-+++||+++. +++...... ..+-..-..+.. .++.+++-.. +.+ ++||+++ .++....
T Consensus 516 Gl~~~~~~~~----~~~~~~~~~-~l~~~~i~~i~~d~~g~lWi~T~--------~Glv~~~d~~~--~~~~~~~----- 575 (781)
T 3v9f_A 516 GVGIYTPDMQ----LVRKFNQYE-GFCSNTINQIYRSSKGQMWLATG--------EGLVCFPSARN--FDYQVFQ----- 575 (781)
T ss_dssp CEEEECTTCC----EEEEECTTT-TCSCSCEEEEEECTTSCEEEEET--------TEEEEESCTTT--CCCEEEC-----
T ss_pred CEEEEeCCCC----eEEEccCCC-CCCCCeeEEEEECCCCCEEEEEC--------CCceEEECCCC--CcEEEcc-----
Confidence 4677888775 676653211 111111112222 2345655421 235 7888888 7776663
Q ss_pred CCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 90 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
....+|.... .+.+...++.||+.+. +.+.+|++.
T Consensus 576 ~~~gl~~~~i-~~i~~d~~g~lW~~t~--------~Gl~~~~~~ 610 (781)
T 3v9f_A 576 RKEGLPNTHI-RAISEDKNGNIWASTN--------TGISCYITS 610 (781)
T ss_dssp GGGTCSCCCC-CEEEECSSSCEEEECS--------SCEEEEETT
T ss_pred ccCCCCCceE-EEEEECCCCCEEEEcC--------CceEEEECC
Confidence 1122343333 3444435677887532 246788877
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=31.86 E-value=1.6e+02 Score=22.14 Aligned_cols=67 Identities=15% Similarity=-0.014 Sum_probs=34.3
Q ss_pred CeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCC-EEEEEeCcCCCCCCCCceE
Q 027962 50 NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFW 128 (216)
Q Consensus 50 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~ 128 (216)
+.+|+....+......+.++++|+.+ .+-...- ..+.. .+...+..++ .+|+.+..+ +.++
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~-----~~~~~-----~~~~~~s~dg~~l~v~~~~~------~~v~ 114 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAI-----HNDLK-----PFGATINNTTQTLWFGNTVN------SAVT 114 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTT--CCEEEEE-----EESSC-----CCSEEEETTTTEEEEEETTT------TEEE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEE-----ecCCC-----cceEEECCCCCEEEEEecCC------CEEE
Confidence 35766653321222356799999988 4432221 00111 1233333444 477765532 4788
Q ss_pred EEecCC
Q 027962 129 VLDTKA 134 (216)
Q Consensus 129 ~~~~~~ 134 (216)
++|+.+
T Consensus 115 ~~d~~~ 120 (353)
T 3vgz_A 115 AIDAKT 120 (353)
T ss_dssp EEETTT
T ss_pred EEeCCC
Confidence 999874
No 54
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.10 E-value=1.8e+02 Score=22.37 Aligned_cols=101 Identities=9% Similarity=0.081 Sum_probs=48.5
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEE-cCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 89 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 89 (216)
..+|.+|++.. .++.+.. ..+......+.+ .+++.+++.... .......++++|+.+ .+...+.
T Consensus 216 ~~l~~~d~~~~----~~~~l~~---~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~--g~~~~l~----- 280 (396)
T 3c5m_A 216 ARMWLVNEDGS----NVRKIKE---HAEGESCTHEFWIPDGSAMAYVSYF-KGQTDRVIYKANPET--LENEEVM----- 280 (396)
T ss_dssp CCCEEEETTSC----CCEESSC---CCTTEEEEEEEECTTSSCEEEEEEE-TTTCCEEEEEECTTT--CCEEEEE-----
T ss_pred ceEEEEECCCC----ceeEeec---cCCCccccceEECCCCCEEEEEecC-CCCccceEEEEECCC--CCeEEee-----
Confidence 46788888764 5555521 111111112233 244533443331 111123499999988 6666652
Q ss_pred CCCCCCCCCCCceEEEEe-CCEEEEEeCcCCC----------CCCCCceEEEecC
Q 027962 90 IPAGFSLPRVGHSATLIL-GGRVLIYGGEDSA----------RRRKDDFWVLDTK 133 (216)
Q Consensus 90 ~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~----------~~~~~~~~~~~~~ 133 (216)
..+. +...... +++++++.+.... ......++++|+.
T Consensus 281 ---~~~~----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 281 ---VMPP----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp ---ECCS----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred ---eCCC----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 1221 1122225 6776766543210 1123678899987
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=30.60 E-value=1.8e+02 Score=22.12 Aligned_cols=64 Identities=14% Similarity=0.189 Sum_probs=35.5
Q ss_pred cCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCC-CCCCceEEEEeCCEEEEEeCcCCCCCCCCc
Q 027962 48 GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSL-PRVGHSATLILGGRVLIYGGEDSARRRKDD 126 (216)
Q Consensus 48 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~ 126 (216)
.+++++++|+.+ ..+.+||+.+ .++..+. .... ...-.++....++.+++.|+.+ ..
T Consensus 18 ~~~~~l~~~~~d------~~v~i~~~~~--~~~~~~~--------~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~ 75 (372)
T 1k8k_C 18 KDRTQIAICPNN------HEVHIYEKSG--NKWVQVH--------ELKEHNGQVTGVDWAPDSNRIVTCGTD------RN 75 (372)
T ss_dssp TTSSEEEEECSS------SEEEEEEEET--TEEEEEE--------EEECCSSCEEEEEEETTTTEEEEEETT------SC
T ss_pred CCCCEEEEEeCC------CEEEEEeCCC--CcEEeee--------eecCCCCcccEEEEeCCCCEEEEEcCC------Ce
Confidence 356677777653 3578888888 6655442 1111 1111222232566677777753 34
Q ss_pred eEEEecC
Q 027962 127 FWVLDTK 133 (216)
Q Consensus 127 ~~~~~~~ 133 (216)
+.++|+.
T Consensus 76 i~vwd~~ 82 (372)
T 1k8k_C 76 AYVWTLK 82 (372)
T ss_dssp EEEEEEE
T ss_pred EEEEECC
Confidence 6777776
No 56
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=28.06 E-value=2e+02 Score=21.99 Aligned_cols=105 Identities=10% Similarity=-0.021 Sum_probs=0.0
Q ss_pred CCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceE
Q 027962 49 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFW 128 (216)
Q Consensus 49 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 128 (216)
+...+++|.+.......-.+|.+|..+ .+.+.+ ... ....-...++..+++.+++++......-.-.+|
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~--g~~~~~--------~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEET--GESLPL--------SDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTT--CCEEEE--------EEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCC--CCEEEe--------ecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEE
Q ss_pred EEecCCCCccccccccccccCcccCCceEeecCCCCCCCCcceeEEEecCCCEEEEEc
Q 027962 129 VLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFG 186 (216)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~r~~h~~~~~~~~~~l~i~G 186 (216)
.++.. +...+.+... +........... .++.||+..
T Consensus 81 ~~~~~------------------~g~~~~~~~~---~~~~~~p~~~~~-dg~~l~~~~ 116 (361)
T 3scy_A 81 AFDKE------------------KGTLHLLNTQ---KTMGADPCYLTT-NGKNIVTAN 116 (361)
T ss_dssp EEETT------------------TTEEEEEEEE---ECSSSCEEEEEE-CSSEEEEEE
T ss_pred EEeCC------------------CCcEEEeeEe---ccCCCCcEEEEE-CCCEEEEEE
No 57
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=27.95 E-value=2.8e+02 Score=23.51 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=50.9
Q ss_pred ccEEEEeccCCccccc---eEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 11 GDTWVLELSENFCFGS---WQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~---W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
+++|++|++.. +. .+++..+. ...-.......++++|+.+..+ . ...+|++|+.+ .+++.+....
T Consensus 217 ~~i~~~d~~~~---g~~~~~~~l~~~~---~~~~~~~~~spdg~l~~~~~~~--~--~~~l~~~~~~~--~~~~~l~~~~ 284 (662)
T 3azo_A 217 TELKTARVTED---GRFADTRTLLGGP---EEAIAQAEWAPDGSLIVATDRT--G--WWNLHRVDPAT--GAATQLCRRE 284 (662)
T ss_dssp EEEEEEEECTT---SCEEEEEEEEEET---TBCEEEEEECTTSCEEEEECTT--S--SCEEEEECTTT--CCEEESSCCS
T ss_pred cEEEEEEECCC---CcccccEEeCCCC---CceEcceEECCCCeEEEEECCC--C--CeEEEEEECCC--Cceeeccccc
Confidence 46888888732 22 23332110 1111223333356677666542 1 24699999888 7788774111
Q ss_pred CCCCCCCCCCCC-CceEEEEeCCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 88 QNIPAGFSLPRV-GHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 88 ~~~~~~~p~~r~-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
.. ...|.-.. ........++++++.+.. -...+|.+|+.
T Consensus 285 ~~--~~~p~w~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~d~~ 324 (662)
T 3azo_A 285 EE--FAGPLWTPGMRWFAPLANGLIAVVHGK-----GAAVLGILDPE 324 (662)
T ss_dssp SB--SSCCCCSTTCCSEEECTTSCEEEEEBS-----SSCEEEEEETT
T ss_pred cc--ccCccccccCceEeEeCCCEEEEEEEc-----CccEEEEEECC
Confidence 00 00111111 112222146777666543 25678888876
No 58
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=27.16 E-value=2.2e+02 Score=22.07 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=22.9
Q ss_pred eEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 43 SLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 43 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
+.++. ++.+|+.... ..++.||.++++..|+.-
T Consensus 48 ~p~v~-~~~v~~~~~~-------g~v~a~d~~tG~~~W~~~ 80 (376)
T 3q7m_A 48 HPALA-DNVVYAADRA-------GLVKALNADDGKEIWSVS 80 (376)
T ss_dssp CCEEE-TTEEEEECTT-------SEEEEEETTTCCEEEEEE
T ss_pred ccEEE-CCEEEEEcCC-------CeEEEEEccCCceeeeec
Confidence 34445 5788887532 268999998877889765
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=27.07 E-value=2.1e+02 Score=21.73 Aligned_cols=98 Identities=9% Similarity=0.125 Sum_probs=48.5
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 90 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 90 (216)
+.+.++|+++. .|+.+..... ....-.++....++++++.|+.+ ..+.+||+.+ .++....
T Consensus 30 ~~v~i~~~~~~----~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~--~~~~~~~------ 90 (372)
T 1k8k_C 30 HEVHIYEKSGN----KWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKG--RTWKPTL------ 90 (372)
T ss_dssp SEEEEEEEETT----EEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEET--TEEEEEE------
T ss_pred CEEEEEeCCCC----cEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCC--CeeeeeE------
Confidence 47888888875 5544431111 11111223333356677777653 2477888877 6655441
Q ss_pred CCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCCceEEEecCC
Q 027962 91 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 134 (216)
Q Consensus 91 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 134 (216)
........-.+.....++.+++.|+.+ ..+.++|+.+
T Consensus 91 -~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~ 127 (372)
T 1k8k_C 91 -VILRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQ 127 (372)
T ss_dssp -ECCCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEET
T ss_pred -EeecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecC
Confidence 001111111122222456677777753 3456666653
No 60
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=26.91 E-value=3e+02 Score=23.54 Aligned_cols=107 Identities=11% Similarity=-0.014 Sum_probs=50.6
Q ss_pred cccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCc-cEEEeccCcC
Q 027962 10 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFF-KWVQIPYELQ 88 (216)
Q Consensus 10 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~-~W~~~~~~~~ 88 (216)
...++++|+++. .-..+.... .....-..+....+++.++++..+ .......++++|+.+ . ....+..+.
T Consensus 234 ~~~l~~~d~~~~----~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~v~~~d~~~--g~~~~~~~~~~- 304 (706)
T 2z3z_A 234 HVTVGIYHLATG----KTVYLQTGE-PKEKFLTNLSWSPDENILYVAEVN-RAQNECKVNAYDAET--GRFVRTLFVET- 304 (706)
T ss_dssp EEEEEEEETTTT----EEEECCCCS-CTTCEEEEEEECTTSSEEEEEEEC-TTSCEEEEEEEETTT--CCEEEEEEEEE-
T ss_pred eeEEEEEECCCC----ceEeeccCC-CCceeEeeEEEECCCCEEEEEEeC-CCCCeeEEEEEECCC--CceeeEEEEcc-
Confidence 357889999874 444432111 111111122223355555554442 222345789999988 5 555542000
Q ss_pred CCCCCCCCCCCCceEEEEe--CCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 89 NIPAGFSLPRVGHSATLIL--GGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 89 ~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
...........+.. . ++++++.+..+. ...+|.+++.
T Consensus 305 ---~~~~~~~~~~~~~s-p~~dg~~l~~~~~~g----~~~l~~~~~~ 343 (706)
T 2z3z_A 305 ---DKHYVEPLHPLTFL-PGSNNQFIWQSRRDG----WNHLYLYDTT 343 (706)
T ss_dssp ---CSSCCCCCSCCEEC-TTCSSEEEEEECTTS----SCEEEEEETT
T ss_pred ---CCCeECccCCceee-cCCCCEEEEEEccCC----ccEEEEEECC
Confidence 00000001112222 5 777666555432 4678888755
No 61
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=25.81 E-value=2.5e+02 Score=22.34 Aligned_cols=17 Identities=12% Similarity=0.231 Sum_probs=13.6
Q ss_pred CceEEEEcCCeEEEEcc
Q 027962 41 GHSLTRIGGNRTVLFGG 57 (216)
Q Consensus 41 ~h~~~~~~~~~iyv~GG 57 (216)
.|+++...++++|.+|-
T Consensus 223 ~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEETTTEEEEEEC
T ss_pred cEEEEEccCCEEEEEeC
Confidence 57777777789999984
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=25.58 E-value=2.5e+02 Score=22.26 Aligned_cols=21 Identities=19% Similarity=0.291 Sum_probs=14.1
Q ss_pred eCCEEEEEeCcCCCCCCCCceEEEecC
Q 027962 107 LGGRVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 107 ~~~~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
.++.+++.|+.+ ..+.++|+.
T Consensus 370 ~~~~~l~s~~~d------g~v~iwd~~ 390 (445)
T 2ovr_B 370 FNKNFVITSSDD------GTVKLWDLK 390 (445)
T ss_dssp ECSSEEEEEETT------SEEEEEETT
T ss_pred ECCCEEEEEeCC------CeEEEEECC
Confidence 456667777653 457888877
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=23.23 E-value=2.4e+02 Score=21.17 Aligned_cols=93 Identities=9% Similarity=0.054 Sum_probs=44.4
Q ss_pred ccEEEEeccCCccccceE-EcccCCCCCCCcCc-eEEEEcCC-eEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCc
Q 027962 11 GDTWVLELSENFCFGSWQ-QLVTHPSPPARSGH-SLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYEL 87 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~-~~~~~~~p~~r~~h-~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~ 87 (216)
+.++++|+++. +-. .+..+.. .+.... .++...++ .+|+.... .+.++.+|+.+ .+.....
T Consensus 206 ~~i~~~d~~~~----~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~--~~~~~~~--- 269 (353)
T 3vgz_A 206 GELITIDTADN----KILSRKKLLDD-GKEHFFINISLDTARQRAFITDSK------AAEVLVVDTRN--GNILAKV--- 269 (353)
T ss_dssp SEEEEEETTTT----EEEEEEECCCS-SSCCCEEEEEEETTTTEEEEEESS------SSEEEEEETTT--CCEEEEE---
T ss_pred CeEEEEECCCC----eEEEEEEcCCC-CCCcccceEEECCCCCEEEEEeCC------CCEEEEEECCC--CcEEEEE---
Confidence 46788888874 221 2211111 112122 23333233 46655422 25689999987 5443321
Q ss_pred CCCCCCCCCCCCCceEEEEeCC-EEEEEeCcCCCCCCCCceEEEecC
Q 027962 88 QNIPAGFSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTK 133 (216)
Q Consensus 88 ~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~~~~ 133 (216)
..+.+ .......++ .+|+.... .+.+.++|+.
T Consensus 270 -----~~~~~---~~~~~s~dg~~l~v~~~~------~~~v~~~d~~ 302 (353)
T 3vgz_A 270 -----AAPES---LAVLFNPARNEAYVTHRQ------AGKVSVIDAK 302 (353)
T ss_dssp -----ECSSC---CCEEEETTTTEEEEEETT------TTEEEEEETT
T ss_pred -----EcCCC---ceEEECCCCCEEEEEECC------CCeEEEEECC
Confidence 11222 123332444 47775432 2468889987
No 64
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=23.11 E-value=2.5e+02 Score=24.72 Aligned_cols=56 Identities=4% Similarity=-0.073 Sum_probs=31.0
Q ss_pred EEEeccCCccccceEEcccC-CCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEec
Q 027962 14 WVLELSENFCFGSWQQLVTH-PSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIP 84 (216)
Q Consensus 14 ~~~d~~~~~~~~~W~~~~~~-~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~ 84 (216)
++||+++. +++..... .+|.... .+++.-.++.|++.+. +.+.+|++++ .+++...
T Consensus 562 ~~~d~~~~----~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~--------~Gl~~~~~~~--~~~~~~~ 618 (781)
T 3v9f_A 562 CFPSARNF----DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN--------TGISCYITSK--KCFYTYD 618 (781)
T ss_dssp EESCTTTC----CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS--------SCEEEEETTT--TEEEEEC
T ss_pred EEECCCCC----cEEEccccCCCCCceE-EEEEECCCCCEEEEcC--------CceEEEECCC--CceEEec
Confidence 66777764 66655421 1222222 3333333456776642 2478899988 7777763
No 65
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=23.07 E-value=2.2e+02 Score=23.48 Aligned_cols=18 Identities=11% Similarity=0.152 Sum_probs=13.7
Q ss_pred cCceEEEEcCCeEEEEcc
Q 027962 40 SGHSLTRIGGNRTVLFGG 57 (216)
Q Consensus 40 ~~h~~~~~~~~~iyv~GG 57 (216)
..|+++...++++|.+|-
T Consensus 157 ~~hs~alt~~G~vy~wG~ 174 (473)
T 3of7_A 157 DNMSCALFSNGEVYAWGT 174 (473)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCEEEEEeCCCeEEEeeC
Confidence 457777777788999983
No 66
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.98 E-value=3.7e+02 Score=23.21 Aligned_cols=59 Identities=15% Similarity=0.124 Sum_probs=35.7
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEe
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 83 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 83 (216)
..+..+|+++. +..|+... +.+..+.. +...++.+|+ |.. + ..++.||.++++..|+.-
T Consensus 453 G~l~A~D~~tG--~~~W~~~~----~~~~~~g~-~~tagg~vf~-gt~--d----g~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 453 GQIKAYNAITG--DYKWEKME----RFAVWGGT-MATAGDLVFY-GTL--D----GYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEEEEECTTTC--CEEEEEEE----SSCCCSBC-EEETTTEEEE-ECT--T----SEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCC--CEEeEecC----CCCccCcc-eEecCCEEEE-ECC--C----CeEEEEECCCCCEEEEee
Confidence 56888999874 34688642 11222222 3343455665 432 1 348899999988889875
No 67
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=22.64 E-value=2.5e+02 Score=21.08 Aligned_cols=83 Identities=6% Similarity=-0.059 Sum_probs=49.0
Q ss_pred ccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCC
Q 027962 11 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 90 (216)
Q Consensus 11 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 90 (216)
+.+.+||++-+ ..|+.-.. ...+++..+.++.+++.+..+ ..+..+|+++++..|+.-.
T Consensus 146 ~~v~~~d~~G~---~~w~~~~~------~~~~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~------ 204 (276)
T 3no2_A 146 SEVREIAPNGQ---LLNSVKLS------GTPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVNA------ 204 (276)
T ss_dssp TEEEEECTTSC---EEEEEECS------SCCCEEEECTTSCEEEECBTT------SEEEEECTTTCCEEEEEEG------
T ss_pred CEEEEECCCCC---EEEEEECC------CCccceeEcCCCCEEEEeCCC------CeEEEEeCcCCcEEEEecC------
Confidence 46888898743 57775421 122445556567788876552 3489999987777887652
Q ss_pred CCCCCCCCC--CceEEEEeCCEEEEEe
Q 027962 91 PAGFSLPRV--GHSATLILGGRVLIYG 115 (216)
Q Consensus 91 ~~~~p~~r~--~~~~~~~~~~~l~v~G 115 (216)
.+.+..|. -.++....++.+|+..
T Consensus 205 -~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 205 -NDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -GGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -CCCCCccccccccceEcCCCCEEEEe
Confidence 11222222 1233343778888876
No 68
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=21.96 E-value=3e+02 Score=21.80 Aligned_cols=67 Identities=10% Similarity=-0.032 Sum_probs=36.8
Q ss_pred CeEEEEccCC---CCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCE-EEEEeCcCCCCCCCC
Q 027962 50 NRTVLFGGRG---VGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGR-VLIYGGEDSARRRKD 125 (216)
Q Consensus 50 ~~iyv~GG~~---~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~-l~v~GG~~~~~~~~~ 125 (216)
+++|+..... ......+.++.+|+.+ .+= + ...+.+...+...+..+++ +++..... .+
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t--~~v--v--------~~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~ 341 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLV--GQT--S--------SQISLGHDVDAISVAQDGGPDLYALSAG-----TE 341 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCC--CEE--E--------EEEECCCCcCeEEECCCCCeEEEEEcCC-----CC
Confidence 5688875421 1122357899999988 433 2 1223333334444435555 44433322 36
Q ss_pred ceEEEecC
Q 027962 126 DFWVLDTK 133 (216)
Q Consensus 126 ~~~~~~~~ 133 (216)
++.++|+.
T Consensus 342 ~V~ViD~~ 349 (373)
T 2mad_H 342 VLHIYDAG 349 (373)
T ss_pred eEEEEECC
Confidence 89999987
No 69
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=21.65 E-value=3.9e+02 Score=23.05 Aligned_cols=74 Identities=8% Similarity=0.042 Sum_probs=37.1
Q ss_pred cCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCC------
Q 027962 48 GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR------ 121 (216)
Q Consensus 48 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~------ 121 (216)
.+++.++|+... .......++++|+.+ .+..... .+.... .......+++.++++......
T Consensus 134 PDg~~la~~~~~-~G~~~~~i~v~d~~t--g~~~~~~---------~~~~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 134 EDGEYFAYGLSA-SGSDWVTIKFMKVDG--AKELPDV---------LERVKF-SCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TTSSEEEEEEEE-TTCSCEEEEEEETTT--TEEEEEE---------EEEECS-CCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCCEEEEEEcC-CCCceEEEEEEECCC--CCCCccc---------ccCccc-ceEEEEeCCCEEEEEEECCcccccccc
Confidence 355666654331 111123689999998 7666542 011111 122332465555555443220
Q ss_pred ----CCCCceEEEecCC
Q 027962 122 ----RRKDDFWVLDTKA 134 (216)
Q Consensus 122 ----~~~~~~~~~~~~~ 134 (216)
....+++++++.+
T Consensus 201 ~~~~~~~~~v~~~~l~t 217 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGT 217 (710)
T ss_dssp CCCCCCCCEEEEEETTS
T ss_pred ccccCCCCEEEEEECCC
Confidence 2345688888874
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=21.57 E-value=2.5e+02 Score=20.82 Aligned_cols=62 Identities=11% Similarity=0.009 Sum_probs=28.2
Q ss_pred cccEEEEeccCCccccceEEcccCCCCCCCcCceEEEEcCCeEEEEccCCCCCceeCcEEEEecC--CCCccEEEe
Q 027962 10 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY--EGFFKWVQI 83 (216)
Q Consensus 10 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~h~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~--~~~~~W~~~ 83 (216)
-+.+.++|+... ...+.+.. .+....-+.++.-.+++.+++++... ..+.+|++. + .+++.+
T Consensus 14 ~~~v~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~--~~~~~~ 77 (343)
T 1ri6_A 14 SQQIHVWNLNHE---GALTLTQV--VDVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDD--GALTFA 77 (343)
T ss_dssp GTEEEEEEECTT---SCEEEEEE--EECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTT--CCEEEE
T ss_pred CCeEEEEEECCC---CcEEEeee--EecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCC--Cceeec
Confidence 346788887532 24443321 11111222233333445444444421 356666665 5 566654
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=21.53 E-value=2.6e+02 Score=20.94 Aligned_cols=98 Identities=12% Similarity=0.035 Sum_probs=53.8
Q ss_pred EEcCCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCCceEEEEeCCEEEEEeCcCCCCCCCC
Q 027962 46 RIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKD 125 (216)
Q Consensus 46 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~ 125 (216)
...++.+++.... ...+..||++ ++..|+.-. ...| +++..+.++.+++.+..+ .
T Consensus 132 ~~~~G~~lv~~~~------~~~v~~~d~~-G~~~w~~~~-------~~~~-----~~~~~~~~g~~~v~~~~~------~ 186 (276)
T 3no2_A 132 KNKKGNYLVPLFA------TSEVREIAPN-GQLLNSVKL-------SGTP-----FSSAFLDNGDCLVACGDA------H 186 (276)
T ss_dssp ECTTSCEEEEETT------TTEEEEECTT-SCEEEEEEC-------SSCC-----CEEEECTTSCEEEECBTT------S
T ss_pred ECCCCCEEEEecC------CCEEEEECCC-CCEEEEEEC-------CCCc-----cceeEcCCCCEEEEeCCC------C
Confidence 3335566665432 1358899986 678898662 2111 234443677777765432 3
Q ss_pred ceEEEecCCCCccccccccccccCcccCCceEeecCCCCCCCC-cceeEEEecCCCEEEEEc
Q 027962 126 DFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCR-SFHRACPDYSGRYLYVFG 186 (216)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~r-~~h~~~~~~~~~~l~i~G 186 (216)
.+..+|+.+. +..|+.-.... +..| .....+....++.+||..
T Consensus 187 ~v~~~d~~tG----------------~~~w~~~~~~~--~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 187 CFVQLNLESN----------------RIVRRVNANDI--EGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEECTTTC----------------CEEEEEEGGGS--BSCCCSEEEEEEECTTSCEEEEE
T ss_pred eEEEEeCcCC----------------cEEEEecCCCC--CCccccccccceEcCCCCEEEEe
Confidence 5788988755 55777653211 1112 112233333567888776
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=21.35 E-value=2.7e+02 Score=21.19 Aligned_cols=64 Identities=11% Similarity=0.096 Sum_probs=32.3
Q ss_pred CCeEEEEccCCCCCceeCcEEEEecCCCCccEEEeccCcCCCCCCCCCCCCC-ceEEEEeCCEEEEEeCcCCCCCCCCce
Q 027962 49 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVG-HSATLILGGRVLIYGGEDSARRRKDDF 127 (216)
Q Consensus 49 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~~~~~ 127 (216)
++++++.|+.+ ..+.+||+.+ ..|..+. ....-... .+.....++.+++.|+.+ ..+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~--~~~~~~~--------~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v 79 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDG--NGWKHAR--------TFSDHDKIVTCVDWAPKSNRIVTCSQD------RNA 79 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEET--TEEEECC--------CBCCCSSCEEEEEECTTTCCEEEEETT------SSE
T ss_pred CCCEEEEecCC------CEEEEEEccC--CceEEEE--------EEecCCceEEEEEEeCCCCEEEEEeCC------CeE
Confidence 45677777653 3466777777 7676662 22111111 122222556777777754 346
Q ss_pred EEEecCC
Q 027962 128 WVLDTKA 134 (216)
Q Consensus 128 ~~~~~~~ 134 (216)
.++|+.+
T Consensus 80 ~vwd~~~ 86 (377)
T 3dwl_C 80 YVYEKRP 86 (377)
T ss_dssp EEC----
T ss_pred EEEEcCC
Confidence 6677663
Done!