Query 027968
Match_columns 216
No_of_seqs 159 out of 1416
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 06:13:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.7E-55 1.6E-59 349.1 20.9 171 45-215 2-172 (173)
2 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.3E-54 1.1E-58 345.9 21.9 171 44-214 7-179 (179)
3 1a58_A Cyclophilin; isomerase, 100.0 4.4E-54 1.5E-58 344.6 22.3 171 45-215 5-177 (177)
4 2he9_A NK-tumor recognition pr 100.0 9E-54 3.1E-58 346.4 21.9 175 41-215 14-190 (192)
5 1qng_A Peptidyl-prolyl CIS-tra 100.0 3.7E-54 1.2E-58 343.1 19.2 169 45-214 2-170 (170)
6 2r99_A Peptidyl-prolyl CIS-tra 100.0 8.3E-54 2.9E-58 341.8 21.3 165 43-215 8-173 (173)
7 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.1E-53 3.7E-58 338.8 21.2 162 46-215 3-165 (165)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.2E-53 4.1E-58 340.4 20.7 164 44-215 8-172 (172)
9 2poy_A Peptidyl-prolyl CIS-tra 100.0 1E-53 3.5E-58 344.4 20.4 171 43-213 16-186 (186)
10 3pmp_A Cyclophilin A; peptidyl 100.0 1.6E-53 5.3E-58 337.8 20.9 162 46-215 2-164 (164)
11 3rdd_A Peptidyl-prolyl CIS-tra 100.0 4.6E-53 1.6E-57 340.4 20.0 166 42-215 18-184 (184)
12 1mzw_A Cyclophilin H, U-snRNP- 100.0 4.2E-53 1.4E-57 338.9 18.6 168 45-214 9-177 (177)
13 2haq_A Cyclophilin; rotamase, 100.0 6.3E-53 2.2E-57 335.9 19.2 163 43-214 8-172 (172)
14 4fru_A Cyclophilin B, peptidyl 100.0 1.2E-52 4.2E-57 338.6 19.9 168 42-216 8-176 (185)
15 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.5E-52 5.2E-57 338.3 19.3 167 41-215 10-178 (188)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 9.1E-52 3.1E-56 335.0 21.5 164 44-215 25-191 (193)
17 1z81_A Cyclophilin; structural 100.0 2.3E-51 8E-56 339.4 18.9 168 45-214 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 2.1E-51 7.1E-56 327.6 12.7 161 45-214 2-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 9.4E-49 3.2E-53 325.6 17.7 170 44-215 12-207 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 3.1E-48 1.1E-52 342.5 21.3 170 46-215 15-185 (370)
21 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4E-47 1.4E-51 308.0 19.3 156 46-215 17-175 (197)
22 2fu0_A Cyclophilin, putative; 100.0 2.8E-47 9.6E-52 300.5 17.0 146 59-215 13-160 (160)
23 2poe_A Cyclophilin-like protei 100.0 2.2E-47 7.5E-52 307.4 16.2 147 58-215 23-175 (185)
24 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.7E-47 9.3E-52 302.2 16.4 152 47-214 12-165 (166)
25 2a2n_A Peptidylprolyl isomeras 100.0 4.5E-47 1.5E-51 303.4 16.9 144 59-213 29-175 (176)
26 2ok3_A Peptidyl-prolyl CIS-tra 100.0 6.1E-47 2.1E-51 299.0 17.1 147 58-215 7-156 (161)
27 2b71_A Cyclophilin-like protei 100.0 1.3E-46 4.4E-51 305.0 17.4 154 46-215 38-193 (196)
28 1w74_A Peptidyl-prolyl CIS-tra 100.0 2E-46 6.9E-51 302.9 18.1 158 50-214 25-191 (191)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.1E-46 7.1E-51 305.6 17.4 155 47-215 5-173 (201)
30 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.8E-46 6.1E-51 305.3 16.3 153 47-215 12-166 (203)
31 2hq6_A Serologically defined c 100.0 3.4E-45 1.2E-49 294.5 14.4 155 44-215 22-180 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 4E-45 1.4E-49 290.0 14.6 152 46-215 4-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 4.3E-45 1.5E-49 289.3 13.6 144 59-215 7-164 (164)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 7.7E-44 2.6E-48 283.0 14.8 143 59-214 11-167 (167)
35 3bkp_A Cyclophilin; malaria, i 100.0 1E-43 3.4E-48 294.9 14.6 155 44-215 19-193 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.2E-39 1.1E-43 282.4 8.4 158 36-210 158-355 (369)
37 3kop_A Uncharacterized protein 95.6 0.076 2.6E-06 41.6 9.0 34 49-83 22-55 (188)
38 2nnz_A Hypothetical protein; b 93.5 0.067 2.3E-06 40.9 4.0 106 51-193 32-143 (153)
39 1zx8_A Hypothetical protein TM 80.6 7.6 0.00026 28.8 7.5 107 48-193 12-124 (136)
40 1x7f_A Outer surface protein; 28.5 23 0.00078 30.8 1.8 50 143-193 326-376 (385)
41 2p0o_A Hypothetical protein DU 27.5 21 0.0007 31.0 1.3 50 143-193 300-350 (372)
42 2k9u_B Filamin-binding LIM pro 25.2 35 0.0012 17.5 1.4 15 155-169 6-20 (26)
43 3omb_A Extracellular solute-bi 20.0 29 0.001 30.5 0.8 16 1-16 2-17 (535)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.7e-55 Score=349.13 Aligned_cols=171 Identities=68% Similarity=1.191 Sum_probs=163.2
Q ss_pred cCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 45 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 45 ~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
.+|+||||+.+++++.|+|+||||++.||+||+||++||++++|.+..++..||+|+.||||+|+|+|||||+..++|.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 36899999999999999999999999999999999999998777666677789999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 204 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~ 204 (216)
+.++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++|.+
T Consensus 82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 161 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVK 161 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSS
T ss_pred CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+||+|+
T Consensus 162 ~v~I~~~g~l~ 172 (173)
T 2igv_A 162 DCMIADCGQLK 172 (173)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEeEEEc
Confidence 99999999996
No 2
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.3e-54 Score=345.86 Aligned_cols=171 Identities=56% Similarity=0.943 Sum_probs=160.7
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcC-CCCccccCCEEEEeecCceeeeccccCCCC
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTLGDG 122 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 122 (216)
..+++|||||.+.+++.|+|+||||++.||+||+||++||+|+++.+.. ++.+||+|+.||||+|+|+|||||+..+++
T Consensus 7 ~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 7 VQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCC
Confidence 3578999999999999999999999999999999999999998876543 577899999999999999999999988889
Q ss_pred CCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCC
Q 027968 123 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGE 201 (216)
Q Consensus 123 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~ 201 (216)
.+++++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++ +++
T Consensus 87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~ 166 (179)
T 2wfi_A 87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASK 166 (179)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSC
T ss_pred CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998754 589
Q ss_pred cccceEEeeeeee
Q 027968 202 PKSKVVISNSGEM 214 (216)
Q Consensus 202 P~~~I~I~~cg~l 214 (216)
|.++|+|.+||+|
T Consensus 167 P~~~v~I~~~G~l 179 (179)
T 2wfi_A 167 PFAEVRILSCGEL 179 (179)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 3
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=4.4e-54 Score=344.63 Aligned_cols=171 Identities=56% Similarity=0.928 Sum_probs=160.2
Q ss_pred cCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcC-CCCccccCCEEEEeecCceeeeccccCCCCC
Q 027968 45 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 123 (216)
Q Consensus 45 ~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 123 (216)
.+++|||||.+++++.|+|+||||++.||+||+||++||+++++.+.. ++..||+|+.||||+|+|+|||||+..+++.
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 478999999999999999999999999999999999999988765443 4556999999999999999999999888899
Q ss_pred CCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCc
Q 027968 124 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEP 202 (216)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P 202 (216)
+++++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++ +++|
T Consensus 85 gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P 164 (177)
T 1a58_A 85 GGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRP 164 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998765 5899
Q ss_pred ccceEEeeeeeec
Q 027968 203 KSKVVISNSGEMA 215 (216)
Q Consensus 203 ~~~I~I~~cg~l~ 215 (216)
.++|+|.+||+|.
T Consensus 165 ~~~v~I~~~G~l~ 177 (177)
T 1a58_A 165 LADVVILNCGELV 177 (177)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCeEEEEeEEEC
Confidence 9999999999984
No 4
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=9e-54 Score=346.36 Aligned_cols=175 Identities=52% Similarity=0.894 Sum_probs=161.2
Q ss_pred cccccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcC-CCCccccCCEEEEeecCceeeeccccC
Q 027968 41 ELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTL 119 (216)
Q Consensus 41 ~~~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~ 119 (216)
.....+|+|||||.+.++++|+|+||||++.||++|+||++||+|+++.+.. ++.+||+|+.||||+|+|+|||||+..
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 3456789999999999999999999999999999999999999998876543 578899999999999999999999988
Q ss_pred CCCCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-
Q 027968 120 GDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ- 198 (216)
Q Consensus 120 ~~~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~- 198 (216)
+++.+++++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred CCCcccceEEeeeeeec
Q 027968 199 SGEPKSKVVISNSGEMA 215 (216)
Q Consensus 199 ~~~P~~~I~I~~cg~l~ 215 (216)
+++|.++|+|.+||+|.
T Consensus 174 ~~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 174 ASRPYADVRVIDCGVLA 190 (192)
T ss_dssp TSCBSSCEEEEEEEECC
T ss_pred CCCCcCCeEEEEeEEEc
Confidence 58999999999999986
No 5
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=3.7e-54 Score=343.07 Aligned_cols=169 Identities=62% Similarity=1.058 Sum_probs=158.8
Q ss_pred cCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 45 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 45 ~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
.+++||||+.+++++.|+|+||||++.||+||+||++||+++ +.+..++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 478999999999999999999999999999999999999864 4334456666999999999999999999998788999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 204 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~ 204 (216)
+.++|++.+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++|.+
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 160 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKR 160 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred ceEEeeeeee
Q 027968 205 KVVISNSGEM 214 (216)
Q Consensus 205 ~I~I~~cg~l 214 (216)
+|+|.+||+|
T Consensus 161 ~v~I~~cG~l 170 (170)
T 1qng_A 161 SVVITDCGEL 170 (170)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeceeC
Confidence 9999999997
No 6
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=8.3e-54 Score=341.76 Aligned_cols=165 Identities=62% Similarity=1.096 Sum_probs=156.1
Q ss_pred cccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCC
Q 027968 43 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGD 121 (216)
Q Consensus 43 ~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~ 121 (216)
...++++||++.+++++.|+|+||||++.||++|+||++||+++++ + |+|+.||||+|+|+|||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKG--------FGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCC--------ceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 3457899999999999999999999999999999999999987544 5 999999999999999999998888
Q ss_pred CCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCC
Q 027968 122 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE 201 (216)
Q Consensus 122 ~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~ 201 (216)
+.++.++|+..|++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~ 159 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 159 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCC
T ss_pred CCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred cccceEEeeeeeec
Q 027968 202 PKSKVVISNSGEMA 215 (216)
Q Consensus 202 P~~~I~I~~cg~l~ 215 (216)
|.++|+|.+||+|+
T Consensus 160 P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 160 PKQKVIIADCGEYV 173 (173)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCeEEEEeeeEC
Confidence 99999999999985
No 7
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.1e-53 Score=338.84 Aligned_cols=162 Identities=64% Similarity=1.147 Sum_probs=155.2
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
+|+||||+.++++++|+|+||||++.||++|+||++||+|+++ | |+|+.||||+|+|+|||||+..+++.+
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 74 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG--------FGYKGSTFHRVIPSFMCQAGDFTNHNGTG 74 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC--------ccCcCCEEEEEECCCEEEeCCccCCCCCC
Confidence 6899999999999999999999999999999999999986543 7 999999999999999999998788999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 204 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~ 204 (216)
+.++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++|.+
T Consensus 75 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~ 154 (165)
T 2z6w_A 75 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSK 154 (165)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSS
T ss_pred CCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+||+|+
T Consensus 155 ~v~I~~~g~l~ 165 (165)
T 2z6w_A 155 KIVITDCGQLS 165 (165)
T ss_dssp CEEEEEEEECC
T ss_pred cEEEEEeEEEC
Confidence 99999999985
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.2e-53 Score=340.44 Aligned_cols=164 Identities=59% Similarity=1.064 Sum_probs=156.0
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCCC
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDG 122 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 122 (216)
..+|+||||+.+++++.|+|+||||++.||++|+||++||++++| | |+|+.||||+|+|+|||||+..++|
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG--------FGYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC--------ceECCCEEEEEECCCEEEcCCccCCCC
Confidence 457899999999999999999999999999999999999986543 6 9999999999999999999988889
Q ss_pred CCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCc
Q 027968 123 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEP 202 (216)
Q Consensus 123 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P 202 (216)
.++.++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++|
T Consensus 80 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P 159 (172)
T 2cmt_A 80 TGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKV 159 (172)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCC
T ss_pred CCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccceEEeeeeeec
Q 027968 203 KSKVVISNSGEMA 215 (216)
Q Consensus 203 ~~~I~I~~cg~l~ 215 (216)
.++|+|.+||+|+
T Consensus 160 ~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 160 KEPVIISRCGELI 172 (172)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEeEC
Confidence 9999999999985
No 9
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1e-53 Score=344.45 Aligned_cols=171 Identities=66% Similarity=1.096 Sum_probs=160.7
Q ss_pred cccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCC
Q 027968 43 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDG 122 (216)
Q Consensus 43 ~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 122 (216)
...+++||||+.+++++.|+|+||||++.||++|+||++||++++|.+..++..+|+|+.||||+|+|+|||||+..+++
T Consensus 16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 34678999999999999999999999999999999999999987776666777789999999999999999999988889
Q ss_pred CCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCc
Q 027968 123 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEP 202 (216)
Q Consensus 123 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P 202 (216)
.++.++|++.|++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||||++|++.++++++|
T Consensus 96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P 175 (186)
T 2poy_A 96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKP 175 (186)
T ss_dssp SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCC
T ss_pred CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred ccceEEeeeee
Q 027968 203 KSKVVISNSGE 213 (216)
Q Consensus 203 ~~~I~I~~cg~ 213 (216)
.++|+|.+||+
T Consensus 176 ~~~v~I~~cG~ 186 (186)
T 2poy_A 176 TKSVCITASGV 186 (186)
T ss_dssp SSCEEEEEEEC
T ss_pred CCCEEEEeCCC
Confidence 99999999996
No 10
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.6e-53 Score=337.81 Aligned_cols=162 Identities=60% Similarity=1.088 Sum_probs=155.2
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
+|+|||||.+++++.|+|+||||++.||+||+||++||+|+++ + |+|+.||||+|+|+|||||+..+++.+
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 73 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG--------FGYKDSIFHRVIPQFMLQGGDFTRHNGTG 73 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC--------CcccCCEEEEEECCCeEEeCCCCCCCCCC
Confidence 6899999999999999999999999999999999999987644 7 999999999999999999987788999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 204 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~ 204 (216)
++++|+..+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||||++|||+|++|++.++++++|.+
T Consensus 74 g~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~ 153 (164)
T 3pmp_A 74 GKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNA 153 (164)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+||+|.
T Consensus 154 ~v~I~~cg~l~ 164 (164)
T 3pmp_A 154 TIKITDCGTVA 164 (164)
T ss_dssp CEEEEEEEEC-
T ss_pred CEEEEeCeEEC
Confidence 99999999984
No 11
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=4.6e-53 Score=340.42 Aligned_cols=166 Identities=61% Similarity=1.082 Sum_probs=156.8
Q ss_pred ccccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCC
Q 027968 42 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLG 120 (216)
Q Consensus 42 ~~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~ 120 (216)
.+..+|+||||+++++++.|+|+||||++.||++|+||++||++++| + |+|+.||||+|+|+|||||+..+
T Consensus 18 ~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~ 89 (184)
T 3rdd_A 18 QGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKG--------FGYKGSCFHRIIPGFMCQGGDFTRH 89 (184)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTTTS
T ss_pred ccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcC--------cccCCCEEEEccCCcEEEeCCCCCC
Confidence 33568999999999999999999999999999999999999987644 5 99999999999999999998888
Q ss_pred CCCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCC
Q 027968 121 DGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSG 200 (216)
Q Consensus 121 ~~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~ 200 (216)
++.++.++++..+++|+..++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++++
T Consensus 90 ~g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g 169 (184)
T 3rdd_A 90 NGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 169 (184)
T ss_dssp SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTS
T ss_pred CCCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceEEeeeeeec
Q 027968 201 EPKSKVVISNSGEMA 215 (216)
Q Consensus 201 ~P~~~I~I~~cg~l~ 215 (216)
+|.++|+|.+||+|+
T Consensus 170 ~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 170 KTSKKITIADCGQLE 184 (184)
T ss_dssp CCSSCEEEEEEEECC
T ss_pred CCcCCeEEEeCeEEC
Confidence 999999999999985
No 12
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=4.2e-53 Score=338.85 Aligned_cols=168 Identities=58% Similarity=1.014 Sum_probs=157.2
Q ss_pred cCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 45 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 45 ~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
.+++||||+.+++++.|+|+||||++.||+||+||++||+++.+. .++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 478999999999999999999999999999999999999877542 234456999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPK 203 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~-~~~~P~ 203 (216)
++++|+..+++|+..++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.++ ++++|.
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~ 166 (177)
T 1mzw_A 87 VASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPK 166 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBS
T ss_pred CCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886 678999
Q ss_pred cceEEeeeeee
Q 027968 204 SKVVISNSGEM 214 (216)
Q Consensus 204 ~~I~I~~cg~l 214 (216)
++|+|.+||+|
T Consensus 167 ~~v~I~~cG~l 177 (177)
T 1mzw_A 167 LPVVISQCGEM 177 (177)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEeceeC
Confidence 99999999997
No 13
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=6.3e-53 Score=335.93 Aligned_cols=163 Identities=65% Similarity=1.073 Sum_probs=154.2
Q ss_pred cccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCC
Q 027968 43 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGD 121 (216)
Q Consensus 43 ~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~ 121 (216)
|..+++||||+.+++++.|+|+||||++.||++|+||++||+|+++ | |+|+.||||+|+|+|||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 8 PEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG--------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEECCCEEecCCccCCC
Confidence 5578999999999999999999999999999999999999987544 7 999999999999999999977788
Q ss_pred CCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC-C
Q 027968 122 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-G 200 (216)
Q Consensus 122 ~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~-~ 200 (216)
+.++.++|++.+++|+..++|. +|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++. +
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999999988654 5
Q ss_pred CcccceEEeeeeee
Q 027968 201 EPKSKVVISNSGEM 214 (216)
Q Consensus 201 ~P~~~I~I~~cg~l 214 (216)
+|.++|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999987
No 14
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.2e-52 Score=338.59 Aligned_cols=168 Identities=66% Similarity=1.100 Sum_probs=158.4
Q ss_pred ccccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCC
Q 027968 42 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGD 121 (216)
Q Consensus 42 ~~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~ 121 (216)
-|.++++|||||+++++++|+|+||||++.||+||+||++||++++| .+|+|+.||||+|+|+|||||+..++
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g-------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 80 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG-------FGYKDSKFHRVIKDFMIQGGDFTRGD 80 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS-------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC-------CeEcCCEEEEeeCCCeEEECCCCCCC
Confidence 46789999999999999999999999999999999999999987533 26999999999999999999998889
Q ss_pred CCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CC
Q 027968 122 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SG 200 (216)
Q Consensus 122 ~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~ 200 (216)
+.++.++++..+++|+..++|+++|+|||++.+|++++|||||+++++++||++|+|||||++|||||++|++.+++ ++
T Consensus 81 g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 160 (185)
T 4fru_A 81 GTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRD 160 (185)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998865 58
Q ss_pred CcccceEEeeeeeecC
Q 027968 201 EPKSKVVISNSGEMAL 216 (216)
Q Consensus 201 ~P~~~I~I~~cg~l~~ 216 (216)
+|.++|+|.+||+|++
T Consensus 161 ~P~~~v~I~~~g~l~~ 176 (185)
T 4fru_A 161 KPLKDVTIADCGKIEV 176 (185)
T ss_dssp CBSSCEEEEEEEEEEE
T ss_pred cCCCCEEEEEceEEec
Confidence 9999999999999863
No 15
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.5e-52 Score=338.28 Aligned_cols=167 Identities=66% Similarity=1.127 Sum_probs=156.9
Q ss_pred cccccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccC
Q 027968 41 ELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTL 119 (216)
Q Consensus 41 ~~~~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~ 119 (216)
..+.+++++||||.+++++.|+|+||||++.||+||+||++||+|+++ | |+|+.||||+|+|+|||||+..
T Consensus 10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~ 81 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG--------FGYKNSKFHRVIKDFMIQGGDFTR 81 (188)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTTT
T ss_pred CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC--------ccccCCEEEEEECCCEEEcCCccC
Confidence 345788999999999999999999999999999999999999987544 7 9999999999999999999777
Q ss_pred CCCCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC
Q 027968 120 GDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS 199 (216)
Q Consensus 120 ~~~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~ 199 (216)
+++.++.++|+..+++|+..++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++.
T Consensus 82 ~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~ 161 (188)
T 3ich_A 82 GDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDS 161 (188)
T ss_dssp SSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999988654
Q ss_pred -CCcccceEEeeeeeec
Q 027968 200 -GEPKSKVVISNSGEMA 215 (216)
Q Consensus 200 -~~P~~~I~I~~cg~l~ 215 (216)
++|.++|+|.+||+|+
T Consensus 162 ~~~P~~~v~I~~~~~l~ 178 (188)
T 3ich_A 162 RDKPLKDVIIADCGKIE 178 (188)
T ss_dssp TSCBSSCEEEEEEEEEE
T ss_pred CCeECCCEEEEEeEEEe
Confidence 6999999999999984
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=9.1e-52 Score=335.02 Aligned_cols=164 Identities=57% Similarity=0.968 Sum_probs=156.3
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeeccccCCCC
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDG 122 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 122 (216)
..+|+||||+.+++++.|+|+||||++.||++|+||++||+++++ + |+|+.||||+|+|+|||||+..+++
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g 96 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKG--------EGYKGSTFHRIIPGFMVQGGDYTAHNG 96 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------SSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccC--------CcccCCEEEEEeCCCEEEeCCCCCCCC
Confidence 457899999999999999999999999999999999999987644 5 9999999999999999999888889
Q ss_pred CCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCc
Q 027968 123 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEP 202 (216)
Q Consensus 123 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P 202 (216)
.++.++|+..+++|+..++|+++|+|+|++.+|++++|||||+++++++||++|+|||||++|||||++|++.++++++|
T Consensus 97 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P 176 (193)
T 3k2c_A 97 TGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQV 176 (193)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCC
T ss_pred cCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred c--cceEEeeeeeec
Q 027968 203 K--SKVVISNSGEMA 215 (216)
Q Consensus 203 ~--~~I~I~~cg~l~ 215 (216)
. ++|+|.+||+|+
T Consensus 177 ~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 177 KKGYRIEIRDCGVLG 191 (193)
T ss_dssp CTTCCEEEEEEEECC
T ss_pred ccCccEEEEEceEeC
Confidence 9 999999999986
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.3e-51 Score=339.43 Aligned_cols=168 Identities=47% Similarity=0.851 Sum_probs=158.0
Q ss_pred cCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 45 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 45 ~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
.+++||||+.+++++.|+|+||||++.||+||+||++||+++++.+ ++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 4789999999999999999999999999999999999999876532 45568999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEE--cCHHHHHHHHhCCCCC--C
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL--SGMDVVRKIEAEGRQS--G 200 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi--~G~~vl~~I~~~~~~~--~ 200 (216)
+.++|+..|++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||||+ +|||||++|++.+++. +
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~ 215 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIY 215 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999999988665 8
Q ss_pred CcccceEEeeeeee
Q 027968 201 EPKSKVVISNSGEM 214 (216)
Q Consensus 201 ~P~~~I~I~~cg~l 214 (216)
+|.++|+|.+||+|
T Consensus 216 ~P~~~V~I~~cG~l 229 (229)
T 1z81_A 216 KPKIPINVVECGEL 229 (229)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999997
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.1e-51 Score=327.63 Aligned_cols=161 Identities=60% Similarity=1.060 Sum_probs=121.6
Q ss_pred cCceEEEEEEEC--C---EEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCcc-ccCCEEEEeecCceeeecccc
Q 027968 45 VTHKVYFDIEVG--G---KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFT 118 (216)
Q Consensus 45 ~~~~v~~~i~~~--~---t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~ 118 (216)
++ +|||||.++ + |++|+|+||||++.||++|+||++||+|++| + |+|+.||||+|+|+|||||+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~ 72 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG--------EGYRESTFHRIIPNFMIQGGDFT 72 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------TSSTTCBCCEEETTTEEEECC--
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEeCCCEEEeCCcC
Confidence 46 899999998 5 4459999999999999999999999987644 6 999999999999999999976
Q ss_pred CCCCCCCccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEc--CHHHHHHHHhCC
Q 027968 119 LGDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLS--GMDVVRKIEAEG 196 (216)
Q Consensus 119 ~~~~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~--G~~vl~~I~~~~ 196 (216)
.+++.+++++|++.+++|+..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++ |||||++|++.+
T Consensus 73 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~ 152 (172)
T 2c3b_A 73 RGNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALG 152 (172)
T ss_dssp --------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTC
T ss_pred CCCCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCC
Confidence 688899999999999999989999999999999999999999999999999999999999999999 999999999988
Q ss_pred CCCC--CcccceEEeeeeee
Q 027968 197 RQSG--EPKSKVVISNSGEM 214 (216)
Q Consensus 197 ~~~~--~P~~~I~I~~cg~l 214 (216)
++.+ +|.++|+|.+||+|
T Consensus 153 t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 153 SSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CTTSCCCSSSCCEEEEEEEC
T ss_pred CCCCCccCCCCeEEEeCeeC
Confidence 7665 99999999999997
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.4e-49 Score=325.64 Aligned_cols=170 Identities=31% Similarity=0.488 Sum_probs=147.0
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcC---CCC----c--c-ccCCEEEEeecCceee
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS---GKP----L--Y-YKGSSFHRIIPSFMIQ 113 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~---~~~----~--~-Y~g~~f~Rv~~~~~iq 113 (216)
..+++|||+|.+++++.|+|+||||++.||+||+||++||++++.+... ++. + | |+|+.||||+|+|+||
T Consensus 12 ~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQ 91 (234)
T 2ose_A 12 GKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIV 91 (234)
T ss_dssp CSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEE
T ss_pred CCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEE
Confidence 3578999999999999999999999999999999999999986322110 111 3 6 9999999999999999
Q ss_pred eccccCCCCCCCccccCCc-----ccccccccccCCCeEEEeee----cCCCCCCccEEEEccC------CCCCCCCCcE
Q 027968 114 GGDFTLGDGRGGESIFGES-----FADENFKLKHTGPGVLSMAN----AGPDTNGSQFFITTVI------TSWLDGRHVV 178 (216)
Q Consensus 114 ~Gd~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~G~vs~~~----~~~~~~~sqF~Itl~~------~~~ld~~~~V 178 (216)
|||+..++|.++.++||.. |+ ++.++|+++|+|||++ .+|++++|||||++++ .++||++|+|
T Consensus 92 gGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 92 SGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp ECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred cCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 9998778899999999987 65 4688999999999999 8999999999999999 8999999999
Q ss_pred EEEEEcCHHHHHHHHhCCCCC-CCcccceEEeeeeeec
Q 027968 179 FGKVLSGMDVVRKIEAEGRQS-GEPKSKVVISNSGEMA 215 (216)
Q Consensus 179 fG~Vi~G~~vl~~I~~~~~~~-~~P~~~I~I~~cg~l~ 215 (216)
||+|++|||||++|++.+++. ++|.++|+|.+||+|+
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~ 207 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYL 207 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECC
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEec
Confidence 999999999999999887654 8999999999999985
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3.1e-48 Score=342.49 Aligned_cols=170 Identities=59% Similarity=1.034 Sum_probs=161.2
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcC-CCCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
+++||||+++++++.|+|+||||++.||+||+||++||++++|.+.. |+..+|+|+.||||+|+|+|||||+..++|.+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999998876543 55668999999999999999999999889999
Q ss_pred CccccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027968 125 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 204 (216)
Q Consensus 125 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~ 204 (216)
+.++||..|++|+..++|+++|+|||++.+|++++||||||+++.++||++|+|||+|++||+++++|+..++..++|.+
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998876699999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+||++.
T Consensus 175 ~v~I~~~g~l~ 185 (370)
T 1ihg_A 175 LCVIAECGELK 185 (370)
T ss_dssp CEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 99999999984
No 21
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4e-47 Score=308.04 Aligned_cols=156 Identities=43% Similarity=0.755 Sum_probs=143.6
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 125 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 125 (216)
....++.|.++ .|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++
T Consensus 17 ~~~~~v~l~T~---~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg 82 (197)
T 1zkc_A 17 RGSGYVRLHTN---KGDLNLELHCDLTPKTCENFIRLCK----------KHYYDGTIFHRSIRNFVIQGGDPT-GTGTGG 82 (197)
T ss_dssp CSCEEEEEEET---TEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEECCTT-SSSSCC
T ss_pred CCCcEEEEEeC---CccEEEEEcCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence 44556677765 9999999999999999999999994 449999999999999999999987 778889
Q ss_pred ccccCCccccc-ccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC--CCc
Q 027968 126 ESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS--GEP 202 (216)
Q Consensus 126 ~~~~~~~~~~e-~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~--~~P 202 (216)
.++|+..+++| +..++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++. ++|
T Consensus 83 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P 162 (197)
T 1zkc_A 83 ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRP 162 (197)
T ss_dssp CBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCB
T ss_pred CccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCc
Confidence 99999999999 468899999999999999999999999999999999999999999999999999999988654 899
Q ss_pred ccceEEeeeeeec
Q 027968 203 KSKVVISNSGEMA 215 (216)
Q Consensus 203 ~~~I~I~~cg~l~ 215 (216)
.++|+|.+|+++.
T Consensus 163 ~~~i~I~~~~v~~ 175 (197)
T 1zkc_A 163 KEEIRIDATTVFV 175 (197)
T ss_dssp SSCCEEEEEEEEE
T ss_pred CCCeEEEEEEEEc
Confidence 9999999999985
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.8e-47 Score=300.47 Aligned_cols=146 Identities=48% Similarity=0.758 Sum_probs=136.5
Q ss_pred EeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCccccccc
Q 027968 59 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF 138 (216)
Q Consensus 59 ~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~ 138 (216)
+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.+++++|+..+++|..
T Consensus 13 ~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~ 81 (160)
T 2fu0_A 13 TMGDIHISLFYKECKKTVQNFSVHSI----------NGYYNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFF 81 (160)
T ss_dssp TTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCB
T ss_pred cCccEEEEEeCCCChHHHHHHHHHhc----------cCccCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCcccccc
Confidence 38999999999999999999999994 449999999999999999999986 7788999999999999987
Q ss_pred -ccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEeeeeeec
Q 027968 139 -KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNSGEMA 215 (216)
Q Consensus 139 -~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P~~~I~I~~cg~l~ 215 (216)
.++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||+|++|++.+++ +++|.++|+|.+|.+++
T Consensus 82 ~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 82 DHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp TTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred CCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 689999999999999999999999999999999999999999999999999999998865 68999999999998864
No 23
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.2e-47 Score=307.42 Aligned_cols=147 Identities=42% Similarity=0.699 Sum_probs=137.6
Q ss_pred EEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCcccccc
Q 027968 58 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 137 (216)
Q Consensus 58 t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~ 137 (216)
|+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++.++|+..+++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSA----------SGYYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhc----------cCCCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 349999999999999999999999994 449999999999999999999987 778889999999999997
Q ss_pred -cccccCCCeEEEeeecC----CCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEeee
Q 027968 138 -FKLKHTGPGVLSMANAG----PDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNS 211 (216)
Q Consensus 138 -~~~~~~~~G~vs~~~~~----~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P~~~I~I~~c 211 (216)
..++|+++|+|||++.+ |++++|||||+++++++||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 68899999999999998 99999999999999999999999999999999999999998754 5899999999999
Q ss_pred eeec
Q 027968 212 GEMA 215 (216)
Q Consensus 212 g~l~ 215 (216)
++++
T Consensus 172 ~i~~ 175 (185)
T 2poe_A 172 VIHS 175 (185)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 24
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.7e-47 Score=302.22 Aligned_cols=152 Identities=49% Similarity=0.863 Sum_probs=139.7
Q ss_pred ceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCc
Q 027968 47 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGE 126 (216)
Q Consensus 47 ~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~ 126 (216)
+.|.++. + .|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++.
T Consensus 12 ~~v~l~t--~---~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~ 75 (166)
T 2x7k_A 12 PNVYLET--S---MGIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGRGGA 75 (166)
T ss_dssp SEEEEEE--T---TEEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEECCTT-SSSSCCC
T ss_pred CEEEEEe--C---CCcEEEEEccCCCCHHHHHHHHHHh----------cCCCCCCEEEEEECCCEEEcCCCC-CCCCCCC
Confidence 5555544 3 8999999999999999999999994 449999999999999999999987 7788899
Q ss_pred cccCCccccccc-ccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCccc
Q 027968 127 SIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKS 204 (216)
Q Consensus 127 ~~~~~~~~~e~~-~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P~~ 204 (216)
++|+..+++|.. .++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||+|++|++.+++ +++|.+
T Consensus 76 si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 155 (166)
T 2x7k_A 76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVD 155 (166)
T ss_dssp CTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSS
T ss_pred ccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCC
Confidence 999999999984 789999999999999999999999999999999999999999999999999999998755 479999
Q ss_pred ceEEeeeeee
Q 027968 205 KVVISNSGEM 214 (216)
Q Consensus 205 ~I~I~~cg~l 214 (216)
+|+|.+|.++
T Consensus 156 ~i~I~~~~i~ 165 (166)
T 2x7k_A 156 DVKIIKAYPS 165 (166)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 9999999986
No 25
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.5e-47 Score=303.38 Aligned_cols=144 Identities=52% Similarity=0.806 Sum_probs=135.5
Q ss_pred EeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCccccccc
Q 027968 59 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF 138 (216)
Q Consensus 59 ~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~ 138 (216)
+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++.++|+..+++|..
T Consensus 29 ~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~ 97 (176)
T 2a2n_A 29 SMGDIHTKLFPVECPKTVENFCVHSR----------NGYYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFH 97 (176)
T ss_dssp TTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCC
T ss_pred cCccEEEEEeCCCChHHHHHHHHHhh----------cCccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCccccccc
Confidence 49999999999999999999999994 449999999999999999999986 6788899999999999987
Q ss_pred -ccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC--CCCcccceEEeeeee
Q 027968 139 -KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ--SGEPKSKVVISNSGE 213 (216)
Q Consensus 139 -~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~--~~~P~~~I~I~~cg~ 213 (216)
.++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++|||+|++|++.+++ +++|.++|+|.+|.+
T Consensus 98 ~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 98 STLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp TTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 689999999999999999999999999999999999999999999999999999998865 789999999999975
No 26
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=6.1e-47 Score=299.03 Aligned_cols=147 Identities=47% Similarity=0.729 Sum_probs=137.3
Q ss_pred EEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCcccccc
Q 027968 58 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 137 (216)
Q Consensus 58 t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~ 137 (216)
|+.|+|+||||++.||++|+||++||++ +||+|+.||||+|+|+|||||+. +++.++.++|+..+++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~----------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 75 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCAS----------NYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEY 75 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT----------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhh----------cccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccccc
Confidence 3499999999999999999999999954 49999999999999999999987 778889999999999997
Q ss_pred c-ccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC--CCcccceEEeeeeee
Q 027968 138 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS--GEPKSKVVISNSGEM 214 (216)
Q Consensus 138 ~-~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~--~~P~~~I~I~~cg~l 214 (216)
. .++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||+|++|++.+++. ++|.++|+|.+|.++
T Consensus 76 ~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 5 7889999999999999999999999999999999999999999999999999999987654 799999999999987
Q ss_pred c
Q 027968 215 A 215 (216)
Q Consensus 215 ~ 215 (216)
+
T Consensus 156 ~ 156 (161)
T 2ok3_A 156 A 156 (161)
T ss_dssp C
T ss_pred c
Confidence 5
No 27
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-46 Score=305.01 Aligned_cols=154 Identities=41% Similarity=0.697 Sum_probs=139.5
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 125 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 125 (216)
++.|.++. +.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++
T Consensus 38 ~~~V~l~T-----~~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITIYT-----NLGDFEVELYWYHSPKTCLNFYTLCE----------MGFYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEEEE-----TTEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEEEe-----CCCCEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 45565553 38999999999999999999999994 449999999999999999999987 778899
Q ss_pred ccccCCcccccc-cccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCcc
Q 027968 126 ESIFGESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPK 203 (216)
Q Consensus 126 ~~~~~~~~~~e~-~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P~ 203 (216)
.++|+..+++|. ..++|+++|+|||++.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++ +++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 999999999995 5789999999999999999999999999999999999999999999999999999998754 58999
Q ss_pred cceEEeeeeeec
Q 027968 204 SKVVISNSGEMA 215 (216)
Q Consensus 204 ~~I~I~~cg~l~ 215 (216)
++|+|.+|+++.
T Consensus 182 ~~i~I~~~~i~~ 193 (196)
T 2b71_A 182 FDLKILRTSTAV 193 (196)
T ss_dssp SCCEEEEEEC--
T ss_pred CCeEEEEEEEec
Confidence 999999999874
No 28
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2e-46 Score=302.90 Aligned_cols=158 Identities=44% Similarity=0.700 Sum_probs=139.9
Q ss_pred EEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCc--CC---CCccccCCEEEEeecCceeeeccccCCCCCC
Q 027968 50 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGK--SG---KPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 124 (216)
Q Consensus 50 ~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~--~~---~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 124 (216)
++.+.++ .|+|+||||++.||++|+||++||+|++++.. .+ +.+||+|+.||||+|+|+|||||+. +++.+
T Consensus 25 ~v~l~t~---~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~-g~G~g 100 (191)
T 1w74_A 25 TATLHTN---RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT-GTGRG 100 (191)
T ss_dssp EEEEEET---TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT-SSSSC
T ss_pred EEEEEec---ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC-CCCCC
Confidence 3445444 99999999999999999999999999887532 12 3579999999999999999999985 56666
Q ss_pred CccccCCccccc-ccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEc--CHHHHHHHHhCCC-CCC
Q 027968 125 GESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLS--GMDVVRKIEAEGR-QSG 200 (216)
Q Consensus 125 ~~~~~~~~~~~e-~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~--G~~vl~~I~~~~~-~~~ 200 (216)
+ ++..|++| +..++|+++|+|||++.+|++++|||||++.++++||++|+|||+|++ |||||++|++.++ .++
T Consensus 101 g---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~ 177 (191)
T 1w74_A 101 G---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGND 177 (191)
T ss_dssp C---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTS
T ss_pred C---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCC
Confidence 6 47889999 468999999999999999999999999999999999999999999999 9999999999886 458
Q ss_pred CcccceEEeeeeee
Q 027968 201 EPKSKVVISNSGEM 214 (216)
Q Consensus 201 ~P~~~I~I~~cg~l 214 (216)
+|.++|+|.+|+++
T Consensus 178 ~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 178 RPTDPVVIESITIS 191 (191)
T ss_dssp CBSSCCEEEEEEEC
T ss_pred CcCCCeEEEEEEEC
Confidence 99999999999974
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-46 Score=305.62 Aligned_cols=155 Identities=34% Similarity=0.551 Sum_probs=135.9
Q ss_pred ceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeec-----cccCCC
Q 027968 47 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGG-----DFTLGD 121 (216)
Q Consensus 47 ~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~G-----d~~~~~ 121 (216)
.+.++.++++ .|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|+|||| |+. ++
T Consensus 5 ~~~~v~l~T~---~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~ 70 (201)
T 3bo7_A 5 KKGYLRIVTT---QGSLNIELHADMAPRACDSFLRLCA----------VKYFDDTIFHRCIRNFMIQGGRAELRQPS-KK 70 (201)
T ss_dssp CCEEEEEEET---TEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBEEEEETTTEEEECCGGGCCC----
T ss_pred CceEEEEEeC---CCCEEEEEcCCCCcHHHHHHHHHHh----------cCccCCCEEEEeeCCCEEEcCcccccCCC-CC
Confidence 3455666655 9999999999999999999999994 449999999999999999999 987 77
Q ss_pred CCCCcccc-------CCcccccc-cccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHH
Q 027968 122 GRGGESIF-------GESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE 193 (216)
Q Consensus 122 ~~~~~~~~-------~~~~~~e~-~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~ 193 (216)
|.++.++| +..+++|. ..++|+++|+|||++++|++++|||||+++++++||++|+|||+|++|||||++|+
T Consensus 71 g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~ 150 (201)
T 3bo7_A 71 KEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWE 150 (201)
T ss_dssp ----CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHT
T ss_pred CCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHH
Confidence 88889998 88999994 67889999999999999999999999999999999999999999999999999999
Q ss_pred hCCCC-CCCcccceEEeeeeeec
Q 027968 194 AEGRQ-SGEPKSKVVISNSGEMA 215 (216)
Q Consensus 194 ~~~~~-~~~P~~~I~I~~cg~l~ 215 (216)
+.+++ +++|.++|+|.+|++|+
T Consensus 151 ~~~t~~~~~P~~~i~I~~~~v~~ 173 (201)
T 3bo7_A 151 KLETDKKDKPLKPPKVEEIIVFK 173 (201)
T ss_dssp TCCBCTTSCBSSCCBEEEEEEEE
T ss_pred hCCcCCCCCcCCCeEEEEEEEEc
Confidence 98765 58999999999999985
No 30
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=305.32 Aligned_cols=153 Identities=49% Similarity=0.850 Sum_probs=140.6
Q ss_pred ceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCc
Q 027968 47 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGE 126 (216)
Q Consensus 47 ~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~ 126 (216)
+.|.++.. +|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.++.
T Consensus 12 ~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~ 75 (203)
T 2k7n_A 12 PNVYLETS-----MGIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGRGGA 75 (203)
T ss_dssp SEEEEEES-----SCEEEEEECTTTCTTHHHHHHHHHH----------HTCGGGCEEEEEETTTEEEEECSS-SSSSCCC
T ss_pred CEEEEEeC-----CCcEEEEEccCCCcHHHHHHHHHHh----------cCccCCCEEEEEeCCcEEEcCCCC-CCCCCCC
Confidence 56655543 8999999999999999999999994 449999999999999999999987 6788899
Q ss_pred cccCCcccccc-cccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCccc
Q 027968 127 SIFGESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKS 204 (216)
Q Consensus 127 ~~~~~~~~~e~-~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~-~~~P~~ 204 (216)
++|+..+++|. ..++|+++|+|+|++.+|++++|||||++.++++||++|+|||||++|||||++|++.+++ +++|.+
T Consensus 76 si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~ 155 (203)
T 2k7n_A 76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVD 155 (203)
T ss_dssp TTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECC
T ss_pred ccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCC
Confidence 99999999998 4889999999999999999999999999999999999999999999999999999988754 579999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+|++++
T Consensus 156 ~V~I~~~~v~~ 166 (203)
T 2k7n_A 156 DVKIIKAYPSG 166 (203)
T ss_dssp CCBEEEEEECC
T ss_pred CeEEEEEEEEe
Confidence 99999999985
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=294.53 Aligned_cols=155 Identities=38% Similarity=0.671 Sum_probs=139.7
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCC
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 123 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 123 (216)
+.+++|++++. .|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++.
T Consensus 22 ~~~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~ 85 (185)
T 2hq6_A 22 PTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPT-GTGS 85 (185)
T ss_dssp CCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEECCTT-SSSS
T ss_pred CCCCEEEEEeC-----CccEEEEEeCCCCcHHHHHHHHHhh----------cCccCCCEEEEEECCCEEEcCCCC-CCCC
Confidence 34567777663 8999999999999999999999995 449999999999999999999986 7788
Q ss_pred CCccccCCccccccc-ccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEEcCHHHH--HHHHhCCC-CC
Q 027968 124 GGESIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVV--RKIEAEGR-QS 199 (216)
Q Consensus 124 ~~~~~~~~~~~~e~~-~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~~vl--~~I~~~~~-~~ 199 (216)
++.++|+..+++|.. .++|+++|+|||++.+|++++|||||+++++++||++|+|||||+ ||+++ ++|+..++ ++
T Consensus 86 gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~ 164 (185)
T 2hq6_A 86 GGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDD 164 (185)
T ss_dssp CCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTT
T ss_pred CCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCC
Confidence 899999999999986 688999999999999999999999999999999999999999999 88775 67777764 57
Q ss_pred CCcccceEEeeeeeec
Q 027968 200 GEPKSKVVISNSGEMA 215 (216)
Q Consensus 200 ~~P~~~I~I~~cg~l~ 215 (216)
++|.++|+|.+|++|+
T Consensus 165 ~~P~~~v~I~~~~v~~ 180 (185)
T 2hq6_A 165 ERPHNPHKIKSCEVLF 180 (185)
T ss_dssp SCBSSCCEEEEEEEEE
T ss_pred CCCCCCeEEEEEEEeC
Confidence 8999999999999985
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=4e-45 Score=290.04 Aligned_cols=152 Identities=32% Similarity=0.492 Sum_probs=133.0
Q ss_pred CceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCC
Q 027968 46 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 125 (216)
Q Consensus 46 ~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 125 (216)
+++|+++. +.|+|+||||++.||+||+||++|| +.+||+|+.||||+|+|+|||||+....+
T Consensus 4 ~~~v~~~t-----~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--- 65 (166)
T 1v9t_A 4 DPHVLLTT-----SAGNIELELDKQKAPVSVQNFVDYV----------NSGFYNNTTFHRVIPGFMIQGGGFTEQMQ--- 65 (166)
T ss_dssp SCEEEEEE-----TTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBEEEEETTTEEEESSBCTTCC---
T ss_pred CeEEEEEe-----CCccEEEEEcCCCCcHHHHHHHHHh----------ccCCCCCCEEEEEECCcEEEcCCcCcCCC---
Confidence 46777763 4899999999999999999999999 44599999999999999999999874432
Q ss_pred ccccCCcccccccccccCCCeEEEeeec-CCCCCCccEEEEccCCCCCCCC-----CcEEEEEEcCHHHHHHHHhCCCCC
Q 027968 126 ESIFGESFADENFKLKHTGPGVLSMANA-GPDTNGSQFFITTVITSWLDGR-----HVVFGKVLSGMDVVRKIEAEGRQS 199 (216)
Q Consensus 126 ~~~~~~~~~~e~~~~~~~~~G~vs~~~~-~~~~~~sqF~Itl~~~~~ld~~-----~~VfG~Vi~G~~vl~~I~~~~~~~ 199 (216)
...++..+++|.....|+.+|+|||++. +|++++|||||++.+.++||++ |+|||+|++|||||++|++.+++.
T Consensus 66 ~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~ 145 (166)
T 1v9t_A 66 QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHD 145 (166)
T ss_dssp BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 2335778899987666677999999997 5999999999999999999998 999999999999999999987653
Q ss_pred -----CCcccceEEeeeeeec
Q 027968 200 -----GEPKSKVVISNSGEMA 215 (216)
Q Consensus 200 -----~~P~~~I~I~~cg~l~ 215 (216)
++|.++|+|.+|++++
T Consensus 146 ~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 146 VGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp ETTEEEEESSCCBEEEEEECC
T ss_pred CCccCCCcCCCeEEEEEEEeC
Confidence 7899999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=4.3e-45 Score=289.34 Aligned_cols=144 Identities=34% Similarity=0.541 Sum_probs=128.8
Q ss_pred EeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCccccccc
Q 027968 59 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF 138 (216)
Q Consensus 59 ~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~ 138 (216)
+.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|+|||||+..+. +.++++..+++|..
T Consensus 7 ~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~ 73 (164)
T 1lop_A 7 NHGDIVIKTFDDKAPETVKNFLDYCR----------EGFYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEAN 73 (164)
T ss_dssp TTEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCC
T ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccccc
Confidence 49999999999999999999999994 459999999999999999999987443 45567889999986
Q ss_pred ccccCCCeEEEeeec-CCCCCCccEEEEccCCCCCCCC--------CcEEEEEEcCHHHHHHHHhCCCC-----CCCccc
Q 027968 139 KLKHTGPGVLSMANA-GPDTNGSQFFITTVITSWLDGR--------HVVFGKVLSGMDVVRKIEAEGRQ-----SGEPKS 204 (216)
Q Consensus 139 ~~~~~~~G~vs~~~~-~~~~~~sqF~Itl~~~~~ld~~--------~~VfG~Vi~G~~vl~~I~~~~~~-----~~~P~~ 204 (216)
...++.+|+|||+++ +|++++|||||++.++++||++ |+|||+|++|||||++|++.+++ +++|.+
T Consensus 74 ~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~ 153 (164)
T 1lop_A 74 NGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKE 153 (164)
T ss_dssp SSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESS
T ss_pred cccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCC
Confidence 533446999999985 7999999999999999999998 99999999999999999998765 479999
Q ss_pred ceEEeeeeeec
Q 027968 205 KVVISNSGEMA 215 (216)
Q Consensus 205 ~I~I~~cg~l~ 215 (216)
+|+|.+|++++
T Consensus 154 ~v~I~~~~v~~ 164 (164)
T 1lop_A 154 DVIIESVTVSE 164 (164)
T ss_dssp CCEEEEEEECC
T ss_pred CeEEEEEEEeC
Confidence 99999999875
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=7.7e-44 Score=283.01 Aligned_cols=143 Identities=34% Similarity=0.477 Sum_probs=125.9
Q ss_pred EeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccCCccccccc
Q 027968 59 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF 138 (216)
Q Consensus 59 ~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~ 138 (216)
+.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|+|||||+..+.+ ...++..+++|..
T Consensus 11 ~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E~~ 77 (167)
T 3s6m_A 11 NHGVIKLELDEAKAPKTVENFLNYVK----------KGHYDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANEAN 77 (167)
T ss_dssp TTEEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCCGG
T ss_pred CCceEEEEEeCCCCcHHHHHHHHHhh----------hcccCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCccc
Confidence 39999999999999999999999995 4499999999999999999999874432 2345677888865
Q ss_pred ccccCCCeEEEeee-cCCCCCCccEEEEccCCCCCCCC--------CcEEEEEEcCHHHHHHHHhCCCC-----CCCccc
Q 027968 139 KLKHTGPGVLSMAN-AGPDTNGSQFFITTVITSWLDGR--------HVVFGKVLSGMDVVRKIEAEGRQ-----SGEPKS 204 (216)
Q Consensus 139 ~~~~~~~G~vs~~~-~~~~~~~sqF~Itl~~~~~ld~~--------~~VfG~Vi~G~~vl~~I~~~~~~-----~~~P~~ 204 (216)
...++.+|+|||++ .+|++++|||||++.++++||++ |+|||+|++|||+|++|++.+++ +++|.+
T Consensus 78 ~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~ 157 (167)
T 3s6m_A 78 NGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPND 157 (167)
T ss_dssp GCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSS
T ss_pred ccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCC
Confidence 44445799999999 57999999999999999999998 99999999999999999998765 479999
Q ss_pred ceEEeeeeee
Q 027968 205 KVVISNSGEM 214 (216)
Q Consensus 205 ~I~I~~cg~l 214 (216)
+|+|.+|.+|
T Consensus 158 ~v~I~~~~il 167 (167)
T 3s6m_A 158 DVVIEKAVVV 167 (167)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 9999999875
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1e-43 Score=294.91 Aligned_cols=155 Identities=33% Similarity=0.570 Sum_probs=137.5
Q ss_pred ccCceEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCC
Q 027968 44 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 123 (216)
Q Consensus 44 ~~~~~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 123 (216)
+.+++|+|++. +|+|+||||++.||++|+||++||++ +||+|+.||||+|+|+|||||+. +++.
T Consensus 19 ~~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~----------g~Ydgt~FhRVi~~FmiQgGdp~-~~G~ 82 (232)
T 3bkp_A 19 STRGKVVLHTS-----LGDLDVELWARECPLACRNFVQLCLE----------GYYVNTIFHRVVKDFIVQGGDPT-GTGR 82 (232)
T ss_dssp SCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHH----------TTTTTCBEEEEETTTEEEECCTT-SSSS
T ss_pred CCCCEEEEEEC-----CCcEEEEEcCCCCcHHHHHHHHHhhc----------CccCCCEEEEEeCCCEEEcCCCC-CCCC
Confidence 34566766553 89999999999999999999999954 49999999999999999999987 7788
Q ss_pred CCcccc--CCccccccc-ccccCCCeEEEeeecCC--------------CCCCccEEEEccCCCCCCCCCcEEEEEEcCH
Q 027968 124 GGESIF--GESFADENF-KLKHTGPGVLSMANAGP--------------DTNGSQFFITTVITSWLDGRHVVFGKVLSGM 186 (216)
Q Consensus 124 ~~~~~~--~~~~~~e~~-~~~~~~~G~vs~~~~~~--------------~~~~sqF~Itl~~~~~ld~~~~VfG~Vi~G~ 186 (216)
++.++| +..+++|.. .++|+.+|+|||++.++ ++++|||||+++++++||++|+|||+|+ ||
T Consensus 83 Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~ 161 (232)
T 3bkp_A 83 GGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GH 161 (232)
T ss_dssp CCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GG
T ss_pred CCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eC
Confidence 999999 899999976 68899999999999886 6999999999999999999999999999 76
Q ss_pred HH--HHHHHhCCC-CCCCcccceEEeeeeeec
Q 027968 187 DV--VRKIEAEGR-QSGEPKSKVVISNSGEMA 215 (216)
Q Consensus 187 ~v--l~~I~~~~~-~~~~P~~~I~I~~cg~l~ 215 (216)
++ |++|+..++ .+++|.++|+|.+|++|+
T Consensus 162 ~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 162 TLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp GHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred chHHHHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 55 899998875 568999999999999985
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.2e-39 Score=282.41 Aligned_cols=158 Identities=23% Similarity=0.371 Sum_probs=134.0
Q ss_pred CCccccccccCceEEEEEEEC-----CEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCc
Q 027968 36 GNSREELEKVTHKVYFDIEVG-----GKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSF 110 (216)
Q Consensus 36 ~~~~~~~~~~~~~v~~~i~~~-----~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~ 110 (216)
+......|.++.++++++++. .++.|+|+||||++.||+||+||++||+ .+||+|+.|||| ++|
T Consensus 158 P~~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~----------~GfYdGt~FHRV-~gF 226 (369)
T 3rfy_A 158 PEEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE----------RHFYDGMEIQRS-DGF 226 (369)
T ss_dssp CSSCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH----------TTTTTTEECEEE-EEE
T ss_pred chhcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCeeeee-CCe
Confidence 455677888888988888885 2358999999999999999999999994 459999999999 999
Q ss_pred eeeeccccCCCCCC---------------------CccccCCccccccc-----ccccCCCeEEEeeec--CCCCCCccE
Q 027968 111 MIQGGDFTLGDGRG---------------------GESIFGESFADENF-----KLKHTGPGVLSMANA--GPDTNGSQF 162 (216)
Q Consensus 111 ~iq~Gd~~~~~~~~---------------------~~~~~~~~~~~e~~-----~~~~~~~G~vs~~~~--~~~~~~sqF 162 (216)
+|||||+. +++.| +.++|+..+.+|++ .++|+++|+|||+++ +||+++|||
T Consensus 227 mIQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQF 305 (369)
T 3rfy_A 227 VVQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQV 305 (369)
T ss_dssp EECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCC
T ss_pred eEecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceE
Confidence 99999997 44444 35677777777754 688999999999997 799999999
Q ss_pred EEEcc-------CCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCcccceEEee
Q 027968 163 FITTV-------ITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISN 210 (216)
Q Consensus 163 ~Itl~-------~~~~ld~~~~VfG~Vi~G~~vl~~I~~~~~~~~~P~~~I~I~~ 210 (216)
||+++ +.++||++|+|||+|++|||||++|++ +..+..|+|.+
T Consensus 306 FItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~~ 355 (369)
T 3rfy_A 306 FWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVVS 355 (369)
T ss_dssp CCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEEE
T ss_pred EEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEec
Confidence 99994 689999999999999999999999986 34566666655
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.64 E-value=0.076 Score=41.56 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=27.7
Q ss_pred EEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhh
Q 027968 49 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALC 83 (216)
Q Consensus 49 v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~ 83 (216)
.|++|++..... .++.+|..+.||+||+.|.++.
T Consensus 22 r~i~itl~~~g~-~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGV-TCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTE-EEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCe-EEEEEEccccChHHHHHHHHhC
Confidence 688888863311 4889999999999999999987
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=93.53 E-value=0.067 Score=40.93 Aligned_cols=106 Identities=16% Similarity=0.149 Sum_probs=60.9
Q ss_pred EEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCccccC
Q 027968 51 FDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFG 130 (216)
Q Consensus 51 ~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~ 130 (216)
+.|.+++ ..++++|+.+.||++++.|+++. =+... +.+. .+-.+ + +... .
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L-------------Pl~~~-~~~~-g~E~y-~-~lp~----------~ 81 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADAL-------------PIKST-ANRW-GDEIY-F-TTQV----------A 81 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTC-------------SEEEE-EEEE-TTEEE-E-CCSC----------C
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhC-------------CcEEE-HHhh-CCcEE-E-ECCC----------C
Confidence 4566664 56999999999999999999987 12221 1111 01000 0 1100 0
Q ss_pred CcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCC------CCcEEEEEEcCHHHHHHHH
Q 027968 131 ESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDG------RHVVFGKVLSGMDVVRKIE 193 (216)
Q Consensus 131 ~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~------~~~VfG~Vi~G~~vl~~I~ 193 (216)
-.. +|+.. ..-.+|-|+.-..+. .+.|..++.|...+ .-.+||+|.+|++.|.++.
T Consensus 82 l~~-~en~~-~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 82 VEK-EENSK-DVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp CCC-SSCCB-CCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred CCC-CCCCc-ccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 001 12211 223478888765432 37888877643222 2578999999988877653
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=80.55 E-value=7.6 Score=28.78 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=60.3
Q ss_pred eEEEEEEECCEEeeEEEEEEeCCCCchhHHHHHHhhccCCCCCcCCCCccccCCEEEEeecCceeeeccccCCCCCCCcc
Q 027968 48 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGES 127 (216)
Q Consensus 48 ~v~~~i~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~ 127 (216)
...+++-.+ -..++.+|+.. |.|++.|+++.= -..+...|. .-+|--.|... .
T Consensus 12 ~~~~~~~~~---~~~v~a~L~Dn--p~Ta~~~~~~LP------l~~~~~~~g-~E~y~~~p~~l-~-------------- 64 (136)
T 1zx8_A 12 HMRVELLFE---SGKCVIDLNEE--YEVVKLLKEKIP------FESVVNTWG-EEIYFSTPVNV-Q-------------- 64 (136)
T ss_dssp EEEEEEECS---SCEEEEEEETT--SHHHHHHHHHCS------EEEECEESS-SEEEEECSCCC-C--------------
T ss_pred eeEEEEeeC---CcEEEEEEcCC--HHHHHHHHHHCC------cEEEHHHhC-CcEEEECCccC-C--------------
Confidence 444555544 34689999654 889999999871 111222343 22222223211 0
Q ss_pred ccCCcccccccccccCCCeEEEeeecCCCCCCccEEEEccCCCCCCC------CCcEEEEEEcCHHHHHHHH
Q 027968 128 IFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDG------RHVVFGKVLSGMDVVRKIE 193 (216)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~------~~~VfG~Vi~G~~vl~~I~ 193 (216)
.+|+.. .-...|-|+.-..+. .|.|-.++.|...+ ...+||||.+|++.|.++.
T Consensus 65 ------~~e~~~-~~~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 65 ------KMENPR-EVVEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp ------CCSSEE-SSBCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred ------CCCCCC-ccCCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 001111 112468888765543 48888887753332 2689999999988776653
No 40
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=28.54 E-value=23 Score=30.81 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=40.2
Q ss_pred CCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHH
Q 027968 143 TGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIE 193 (216)
Q Consensus 143 ~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi-~G~~vl~~I~ 193 (216)
.++|.|.+.++.-..-..+.-|++.+.| -|++..|+|+|. +-+.+|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 4689999998764445579999999987 678889999999 5677777774
No 41
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=27.49 E-value=21 Score=30.96 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=40.9
Q ss_pred CCCeEEEeeecCCCCCCccEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHH
Q 027968 143 TGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIE 193 (216)
Q Consensus 143 ~~~G~vs~~~~~~~~~~sqF~Itl~~~~~ld~~~~VfG~Vi-~G~~vl~~I~ 193 (216)
.++|.|.+.++.-..-..+.-|++.+.| -|++..|+|+|. +-+.+|+-|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 4689999998754445579999999988 778899999999 5678888875
No 42
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=25.21 E-value=35 Score=17.53 Aligned_cols=15 Identities=27% Similarity=0.233 Sum_probs=10.2
Q ss_pred CCCCCccEEEEccCC
Q 027968 155 PDTNGSQFFITTVIT 169 (216)
Q Consensus 155 ~~~~~sqF~Itl~~~ 169 (216)
...-.|..||||.+-
T Consensus 6 eKR~aSSvFITLapp 20 (26)
T 2k9u_B 6 EKRVASSVFITLAPP 20 (26)
T ss_dssp SSSCEEEEEEEECCS
T ss_pred hhheeeeEEEEecCc
Confidence 344467899999753
No 43
>3omb_A Extracellular solute-binding protein, family 1; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG; 2.10A {Bifidobacterium longum subsp}
Probab=20.02 E-value=29 Score=30.53 Aligned_cols=16 Identities=25% Similarity=0.208 Sum_probs=0.0
Q ss_pred CcchhhhHHHHHHHHH
Q 027968 1 MATKTRLVSVALLWAL 16 (216)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (216)
|+++.+++.+++++++
T Consensus 2 M~r~~~kk~~~~~~~~ 17 (535)
T 3omb_A 2 MRRQTMVKAGAVACAV 17 (535)
T ss_dssp ----------------
T ss_pred cchhhHHHHHHHHHHH
Confidence 4555555544444333
Done!