Citrus Sinensis ID: 027969
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 216 | 2.2.26 [Sep-21-2011] | |||||||
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.990 | 0.656 | 0.394 | 1e-35 | |
| Q9S9N9 | 344 | Cinnamoyl-CoA reductase 1 | no | no | 0.925 | 0.581 | 0.368 | 1e-28 | |
| Q9CA28 | 321 | Tetraketide alpha-pyrone | no | no | 0.976 | 0.657 | 0.373 | 6e-28 | |
| Q9SAH9 | 332 | Cinnamoyl-CoA reductase 2 | no | no | 0.981 | 0.638 | 0.347 | 1e-25 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.976 | 0.626 | 0.336 | 5e-24 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.967 | 0.600 | 0.324 | 4e-22 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.967 | 0.602 | 0.32 | 1e-21 | |
| P14721 | 446 | Dihydroflavonol-4-reducta | N/A | no | 0.976 | 0.473 | 0.322 | 2e-20 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.953 | 0.572 | 0.334 | 3e-20 | |
| P14720 | 380 | Dihydroflavonol-4-reducta | N/A | no | 0.972 | 0.552 | 0.308 | 1e-19 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 127/218 (58%), Gaps = 4/218 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLRSC K S+KRVVLTSS + + + P + +DE+ +++ LCK + WY+L
Sbjct: 106 GTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDD-FDPKIPLDESIWTSVELCKRFQVWYAL 164
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAF--P 118
+KTLAE+AAWKF++ENGIDLV + P ++GP P L A +L L+ G+ + F +
Sbjct: 165 SKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQ 224
Query: 119 YIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ 178
+V I DV HI E A GRY+ + +V +++ FL YP+L + E+ +
Sbjct: 225 MGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEKLNR 284
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
+ +SLG+ F E CI SL+E+G+LS
Sbjct: 285 LHYDFDTSKIQSLGLKFKSLEEMFDDCIASLVEQGYLS 322
|
Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75
+KRVV+TSSIGA+ ++ P+ V+DE+ +S+ CK K WY K +AE+AAW+ AK
Sbjct: 119 VKRVVITSSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAK 177
Query: 76 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIR 133
E G+DLV ++P V+GP QP +N +L + G +++A +V++RDV AH+
Sbjct: 178 EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVL 237
Query: 134 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTI---KVSQERAKS 190
E P ASGRYLLA S ++++ L + +P K +++ P K + ++ K
Sbjct: 238 VYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKD 297
Query: 191 LGINFTPWEVGVRGCIESLMEKGFLS 216
LG+ FT + + ++SL EKG L+
Sbjct: 298 LGLEFTSTKQSLYDTVKSLQEKGHLA 323
|
Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 116/222 (52%), Gaps = 11/222 (4%)
Query: 2 GTLNVLRSCAKVH-SIKRVVLTSSIGAM--LLNETPMTPDVVIDETWFSNPVLCKENKEW 58
GT NV+ SCAK ++KR+VLTSS ++ + T +P ++E+ +S+P CK W
Sbjct: 103 GTTNVMSSCAKSKATLKRIVLTSSCSSIRYRFDATEASP---LNESHWSDPEYCKRFNLW 159
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING--DQSFA 116
Y AKTL E AW+ A+E G+DLV ++P V+GP P +IL + G +
Sbjct: 160 YGYAKTLGEREAWRIAEEKGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPN 219
Query: 117 FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK 176
F FV I DVV AH+ A+E PKASGR + + SVA S+I++ +R YP K K
Sbjct: 220 FTVGFVHIDDVVAAHVLAMEEPKASGRIICSSSVAHWSEIIELMRNKYPNYPFENKCSNK 279
Query: 177 YQPTIKVSQERAK--SLGI-NFTPWEVGVRGCIESLMEKGFL 215
S + K LG +F CI S +KG L
Sbjct: 280 EGDNSPHSMDTRKIHELGFGSFKSLPEMFDDCIISFQKKGLL 321
|
May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 7/219 (3%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
G V+ + AK +KRVV TSSIGA+ +N T ++DE +S+ CK K WY
Sbjct: 101 GAKFVIDAAAKA-KVKRVVFTSSIGAVYMNPNRDT-QAIVDENCWSDLDFCKNTKNWYCY 158
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPY 119
K LAE++AW+ AK G+DLV ++P V+GP Q +N IL + G +++A
Sbjct: 159 GKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQ 218
Query: 120 IFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQP 179
++V++RDV H+ E P ASGRY+LA + ++++ L + +P K ++ P
Sbjct: 219 VYVDVRDVALGHVLVYEAPSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNP 278
Query: 180 TI---KVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
K + ++ K LG+ F P + + ++SL EKG L
Sbjct: 279 RAKPYKFTTQKIKDLGLEFKPIKQSLYESVKSLQEKGHL 317
|
Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 12/223 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW- 58
G L +++SCA +++R+V TSS G + + E + V DE+ +S+ C+ K W
Sbjct: 106 GMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP---VYDESCWSDMEFCRAKKMTAWM 162
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ---SF 115
Y ++KTLAE+AAWK+AKEN ID + I P V+GPF + L+ I G++ S
Sbjct: 163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI 222
Query: 116 AFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYP--TLLRSGKL 173
FV + D+ AHI E PKA GRY+ + D+ K LRE YP + K
Sbjct: 223 IRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKG 282
Query: 174 EEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
++ ++ S ++ LG F E G +++ KG L
Sbjct: 283 VDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325
|
Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW- 58
G L++L++C K +++++V TSS G + + E V DE+ +S+ C+ K W
Sbjct: 106 GLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWM 162
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP 118
Y ++KTLAE+AAWK+AKEN ID + I P VIGPF P + L+ I ++S +
Sbjct: 163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESH-YG 221
Query: 119 YI----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGK-- 172
I +V + D+ +HI E PKA GRY+ + A +++K LRE YP K
Sbjct: 222 IIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFK 281
Query: 173 -LEEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
+++ +P + S ++ + +G F E G +++ KG +
Sbjct: 282 GIDDNLEP-VHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW- 58
G L++L++C K +++++V TSS G + + E V DE+ +S+ C+ K W
Sbjct: 106 GLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWM 162
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP 118
Y ++KTLAE+AAWK+AKEN ID + I P VIGPF P + L+ I ++S +
Sbjct: 163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESH-YG 221
Query: 119 YI----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGK-- 172
I +V + D+ +HI + PKA GRY+ + A +++K LRE YP K
Sbjct: 222 IIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFK 281
Query: 173 -LEEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
+++ +P + S ++ + +G F E G +++ KG +
Sbjct: 282 GIDDNLEP-VHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 12/223 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP--VLCKENKEW- 58
G LN+++SC + ++K+ + T+S G + + E V DET S+ + K+ W
Sbjct: 118 GMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEHQKP---VYDETDSSDMDFINSKKMTGWM 174
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ---SF 115
Y ++K LAE+A + AKEN ID ++I P V+GPF P L+ I G++ S
Sbjct: 175 YFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSI 234
Query: 116 AFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE- 174
+V + D+ HI E PKA GRY+ + A DI K + E++P + E
Sbjct: 235 IKQCQYVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEG 294
Query: 175 -EKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
+K P + S ++ +G F E VRG I++ EKG L
Sbjct: 295 IDKDIPVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKGML 337
|
Antirrhinum majus (taxid: 4151) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W- 58
G L++L+SC K ++RVV TSS G + T V DET +S + K W
Sbjct: 123 GMLDILKSCVKA-KLRRVVFTSSGGTV---NVEATQKPVYDETCWSALDFIRSVKMTGWM 178
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP 118
Y ++K LAE+AAWK+A EN ++ ++I P V+GPF P + L+ I +S +
Sbjct: 179 YFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESH-YT 237
Query: 119 YI----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE 174
I FV + D+ +HI E PKA+GRY+ + A DI K LRE YP K +
Sbjct: 238 IIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFK 297
Query: 175 EKYQP--TIKVSQERAKSLGINFTPWEVGVR----GCIESLMEKGFL 215
+ + ++ S ++ LG F + G++ +ES KG L
Sbjct: 298 DYKEDMGQVQFSSKKLTDLGFEF---KYGLKDMYTAAVESCRAKGLL 341
|
Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2 | Back alignment and function description |
|---|
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 14/224 (6%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP--VLCKENKEW- 58
G L+++ SCAK +++KR+V TSS G + + E + D+T +S+ + K+ W
Sbjct: 116 GMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQ---KLFYDQTSWSDLDFIYAKKMTGWM 172
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP 118
Y +K LAE+AA + AK+ ID ++I P V+GPF P L+LI G+++ +
Sbjct: 173 YFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAH-YC 231
Query: 119 YI----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE 174
I +V + D+ AHI E PKA GR++ + A D+ K +RE +P + +
Sbjct: 232 IIKQGQYVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFK 291
Query: 175 --EKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
+K P + S ++ +G F E +G I++ +K L
Sbjct: 292 GIDKDLPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLL 335
|
Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 216 | ||||||
| 255553494 | 324 | cinnamoyl-CoA reductase, putative [Ricin | 0.995 | 0.663 | 0.582 | 4e-66 | |
| 359486990 | 323 | PREDICTED: LOW QUALITY PROTEIN: bifuncti | 0.981 | 0.656 | 0.570 | 2e-65 | |
| 255553474 | 324 | cinnamoyl-CoA reductase, putative [Ricin | 0.995 | 0.663 | 0.577 | 3e-65 | |
| 224106117 | 341 | cinnamoyl CoA reductase-like protein [Po | 0.990 | 0.627 | 0.572 | 3e-65 | |
| 225470855 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.995 | 0.659 | 0.570 | 7e-65 | |
| 157365234 | 301 | cinnamyl alcohol dehydrogenase 2 [Eriobo | 0.972 | 0.697 | 0.576 | 1e-64 | |
| 225470851 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.995 | 0.659 | 0.570 | 1e-64 | |
| 225455496 | 324 | PREDICTED: dihydroflavonol-4-reductase [ | 0.995 | 0.663 | 0.582 | 4e-64 | |
| 255553468 | 666 | cinnamoyl-CoA reductase, putative [Ricin | 0.990 | 0.321 | 0.580 | 5e-64 | |
| 408777393 | 326 | cinnamyl alcohol dehydrogenase [Punica g | 0.976 | 0.647 | 0.558 | 9e-64 |
| >gi|255553494|ref|XP_002517788.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223543060|gb|EEF44595.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 162/218 (74%), Gaps = 3/218 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL+SCAKV S+KRVV+TSS+ A+L + P+T DVV+DETW+S+P +CKE K WY+L
Sbjct: 106 GTLNVLKSCAKVKSVKRVVITSSMAAVLRSRRPLTADVVVDETWYSDPEVCKELKVWYAL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI- 120
+KTLAEEAAW FAKEN IDLV I+P VIGP QP LN E+ILNLI G +++ Y
Sbjct: 166 SKTLAEEAAWNFAKENAIDLVTINPTYVIGPMLQPTLNSSVEMILNLIKGAETYPNAYYS 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK--YQ 178
+IRDVV HI+A EVP ASGRY + +V +S+++K + EHYPTL K +E
Sbjct: 226 SADIRDVVDVHIQAFEVPSASGRYCVVPNVLHYSEVVKIIHEHYPTLHLPEKCDETQLLS 285
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
P+ KVS E+AKSLGIN+ P+EV ++G IESL EKGFL+
Sbjct: 286 PSFKVSNEKAKSLGINYIPFEVTLKGTIESLKEKGFLT 323
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486990|ref|XP_003633502.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 169/221 (76%), Gaps = 9/221 (4%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVLRSC+KV S+KRVV+TSS+ ++L P+TP+V+IDE+WFS+PVLCKE+K+WY L
Sbjct: 105 GTINVLRSCSKVPSVKRVVVTSSLASVLFTGEPVTPEVLIDESWFSDPVLCKESKQWYVL 164
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI- 120
+K +AEEAAW F+KENGID+V I+PG VIGP QP LN AE +LNLING Q+ FP I
Sbjct: 165 SK-IAEEAAWNFSKENGIDMVTINPGWVIGPLLQPTLNLSAEQVLNLINGAQT--FPNIS 221
Query: 121 --FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL---RSGKLEE 175
+V++RDV AHI+A E+P+ASGRY L + +S+ILK LR+ YP L R ++++
Sbjct: 222 SWWVDVRDVANAHIQAYEIPEASGRYCLVEGIXHNSEILKILRKLYPGLPLPERXMRIDK 281
Query: 176 KYQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
Y P+ + SQE+AKSLGI+FTP EV ++ +ESL EK F+S
Sbjct: 282 PYAPSSRASQEKAKSLGIHFTPLEVSLKDTVESLKEKNFVS 322
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553474|ref|XP_002517778.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223543050|gb|EEF44585.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 161/218 (73%), Gaps = 3/218 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL+SCAKV S+KRVV+TSS+ A++ + P+T DVVIDETW S+P +CKE K+WY+L
Sbjct: 106 GTLNVLKSCAKVQSVKRVVITSSMVAVVYSRRPLTGDVVIDETWHSDPEVCKEIKDWYAL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI- 120
+KTLAEEAAW FAKEN IDLV I+P VIGP QP LN E+IL L NG Q++ Y
Sbjct: 166 SKTLAEEAAWNFAKENAIDLVTINPTYVIGPMLQPTLNSTVEMILKLTNGSQTYPNAYYP 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK--YQ 178
++IRDVV AHI+A EVP ASGRY L ++ +S+++K + EHYPTL K EE
Sbjct: 226 SIDIRDVVDAHIQAFEVPSASGRYCLVANMLHYSEVVKIIHEHYPTLHLPEKCEETPLLS 285
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
P +KVS E+ K+LGIN+ P+EV ++ IESL EKGFL+
Sbjct: 286 PCVKVSDEKVKTLGINYIPFEVTLQDTIESLKEKGFLN 323
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106117|ref|XP_002314050.1| cinnamoyl CoA reductase-like protein [Populus trichocarpa] gi|222850458|gb|EEE88005.1| cinnamoyl CoA reductase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 156/215 (72%), Gaps = 1/215 (0%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLRSCAKVHSI+RVVLTSS A + + P+ DVVIDETW+S+P +CKE K WY+L
Sbjct: 125 GTLNVLRSCAKVHSIRRVVLTSSAAACIYSGKPLNHDVVIDETWYSDPAICKELKAWYAL 184
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI- 120
+KTLAEEAAW FAKEN DLV +HP VIGP QP LN E+IL+L+NG +++ Y
Sbjct: 185 SKTLAEEAAWNFAKENATDLVTVHPSFVIGPLLQPTLNLSVEMILDLVNGAETYPNGYYR 244
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT 180
+++RDV AHI+A E+P ASGRY+L V S++LK +RE+YPTL K E
Sbjct: 245 CIDVRDVANAHIQAFEIPSASGRYVLTAYVTTFSEVLKIIRENYPTLRLPEKSTESMFKP 304
Query: 181 IKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+VS+E+AK+LGINFTP ++ + IESL EKGFL
Sbjct: 305 YQVSKEKAKTLGINFTPLDLSLVDTIESLKEKGFL 339
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470855|ref|XP_002268322.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205076|emb|CBI40597.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 162/219 (73%), Gaps = 4/219 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVLRSC+KV S+KRVV+TSS+ A+ N P+TP+V+IDE+WFS+ VLCKE+K WY L
Sbjct: 107 GTINVLRSCSKVPSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKL 166
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--AFPY 119
+KTLAEEAAWKF+KENGID+V I+PG V+GP QP LN E IL L+NG Q+F Y
Sbjct: 167 SKTLAEEAAWKFSKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNGVQTFPKTTSY 226
Query: 120 IFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ- 178
+V+ RDV AHI+A E+P+ASGRY L G+V+ S+ L L + YP + K E+
Sbjct: 227 TWVDARDVANAHIQAFELPEASGRYCLVGTVSHRSETLNILHKLYPAIHIPEKWEDGQTC 286
Query: 179 -PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
PT +VSQE+AKSLGI+FTP EV ++ +ESL EK F+S
Sbjct: 287 VPTFRVSQEKAKSLGIHFTPLEVSIKDTVESLKEKNFIS 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157365234|gb|ABV44811.1| cinnamyl alcohol dehydrogenase 2 [Eriobotrya japonica] | Back alignment and taxonomy information |
|---|
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 156/217 (71%), Gaps = 7/217 (3%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL+SCAK ++KRVVLTSS+ ++ L+ P+T DVV+DETW+S+P+ CKE K+WY L
Sbjct: 87 GTLNVLKSCAKFPAVKRVVLTSSLASVRLSGKPLTSDVVMDETWYSDPLFCKEIKQWYPL 146
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIF 121
+KTLAEEAAWKFAK NGIDLV IHPG VIGP QP LN E +LNL++G ++ Y F
Sbjct: 147 SKTLAEEAAWKFAKGNGIDLVTIHPGIVIGPLLQPTLNLSVEFLLNLMSGIETPFVNYAF 206
Query: 122 VEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT- 180
V++RDV +AHI+A EVP ASGRY L VA D LK +RE YPTL L E P+
Sbjct: 207 VDVRDVAFAHIQAFEVPSASGRYCLVAQVADAPDTLKIIRELYPTL----SLCEPGNPSG 262
Query: 181 --IKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+VS+E+AK LGI F P E ++ +ESLM KGFL
Sbjct: 263 SKFQVSREKAKCLGITFLPLETSLKDTVESLMGKGFL 299
|
Source: Eriobotrya japonica Species: Eriobotrya japonica Genus: Eriobotrya Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470851|ref|XP_002268122.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205080|emb|CBI40601.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 162/219 (73%), Gaps = 4/219 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVLRSC+KV S+KRVV+TSS+ A+ N P+TP+V+IDE+WFS+ VLCKE+K WY L
Sbjct: 107 GTINVLRSCSKVPSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKL 166
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--AFPY 119
+KTLAEEAAWKF+KENGID+V I+PG V+GP QP LN E IL L+NG Q+F Y
Sbjct: 167 SKTLAEEAAWKFSKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNGVQTFPKTTSY 226
Query: 120 IFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ- 178
+V+ RDV AHI+A E+P+ASGRY L G+V+ S+ L L + YP + K E+
Sbjct: 227 TWVDARDVANAHIQAFELPEASGRYCLVGTVSHRSETLNILHKLYPAIHIPEKWEDGQTC 286
Query: 179 -PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
PT +VSQE+AKSLGI+FTP EV ++ +ESL EK F+S
Sbjct: 287 VPTFRVSQEKAKSLGIHFTPLEVSMKDTVESLKEKNFIS 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455496|ref|XP_002263014.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296086795|emb|CBI32944.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 156/218 (71%), Gaps = 3/218 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLRSCAKV SI+RVV+TSS+ A+ +TPDVV+DETWFS+P +C++ K WY L
Sbjct: 106 GTLNVLRSCAKVPSIRRVVVTSSMAAVAFTGQTLTPDVVVDETWFSDPAVCEKLKLWYML 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYI 120
+KTLAEEAAWKFAKEN IDLVAI+PG VIGP QP LN E +L LING Q+F Y
Sbjct: 166 SKTLAEEAAWKFAKENKIDLVAINPGLVIGPLLQPTLNTSVEPVLKLINGTQTFPNITYR 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQ 178
+V++RDV AHI+A EVP A+GRY L V S+++K L E YPT K ++ ++
Sbjct: 226 WVDVRDVANAHIQAFEVPSANGRYCLVSRVTHCSEVVKILHELYPTSNLPDKCADDKPFE 285
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
PT +VSQERA+SLGINF P EV +ESL EK F S
Sbjct: 286 PTYQVSQERARSLGINFIPVEVSFNDTVESLKEKKFFS 323
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553468|ref|XP_002517775.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223543047|gb|EEF44582.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 158/217 (72%), Gaps = 3/217 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL+SCAK S+KRVV+TSSI A++ N P+TPDVVIDETW S+ C+E + WY++
Sbjct: 448 GTLNVLKSCAKFPSVKRVVITSSISAVMFNGKPLTPDVVIDETWNSDQAFCEEKQLWYAV 507
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP-YI 120
+KTLAE AAWKF+KENGID+V I+PG VIGPF QP LN EVIL +NG Q++ Y
Sbjct: 508 SKTLAEAAAWKFSKENGIDMVTINPGFVIGPFLQPTLNITTEVILKHVNGAQTYPNDNYR 567
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQ 178
FV+IRDV AHI+A E P ASGRY L SV S++L +R+HYP+L K E+ +
Sbjct: 568 FVDIRDVGNAHIQAFERPSASGRYCLVASVTHFSEVLNIVRKHYPSLQLPEKCVDEKPFV 627
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+VS E+AK+LGI+FTP EV V+ IESL EKGFL
Sbjct: 628 SKYEVSNEKAKTLGIDFTPLEVTVKDTIESLREKGFL 664
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408777393|gb|AFU90744.1| cinnamyl alcohol dehydrogenase [Punica granatum] | Back alignment and taxonomy information |
|---|
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 161/222 (72%), Gaps = 11/222 (4%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL+SCAKV SI+RVVLTSS+ A+ N P TPDVV+DETWFS+P C+ENK WY L
Sbjct: 108 GTLNVLKSCAKVSSIQRVVLTSSVAAVAYNGKPRTPDVVVDETWFSSPEFCRENKMWYVL 167
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYI 120
+KTLAE+AAWKF KE GID+VAI+P VIGP QP LN A ILN+ING ++F +
Sbjct: 168 SKTLAEDAAWKFVKEKGIDMVAINPAMVIGPLLQPTLNTSAAAILNIINGAETFPNASFG 227
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK---- 176
+V ++DV AH++A E+P ASGR+ L VA +S+++K LRE YP + KL EK
Sbjct: 228 WVNVKDVANAHVQAFEIPSASGRHCLVERVAHYSEVVKILRELYPQI----KLPEKCADD 283
Query: 177 --YQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
+ PT +VS+E+AKSLGI++ P E G++ +ESL EKGF +
Sbjct: 284 KPFVPTYQVSKEKAKSLGIDYIPLEQGIKETVESLKEKGFAT 325
|
Source: Punica granatum Species: Punica granatum Genus: Punica Family: Lythraceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 216 | ||||||
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.986 | 0.653 | 0.541 | 2.8e-57 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.990 | 0.658 | 0.511 | 2.6e-54 | |
| TAIR|locus:2012250 | 369 | AT1G09480 [Arabidopsis thalian | 0.990 | 0.579 | 0.479 | 2.8e-50 | |
| TAIR|locus:2012280 | 325 | AT1G09500 [Arabidopsis thalian | 0.976 | 0.649 | 0.490 | 3.6e-50 | |
| TAIR|locus:2012315 | 322 | AT1G09510 [Arabidopsis thalian | 0.976 | 0.655 | 0.5 | 7.4e-50 | |
| TAIR|locus:2012265 | 322 | AT1G09490 [Arabidopsis thalian | 0.990 | 0.664 | 0.465 | 1.1e-48 | |
| TAIR|locus:2033394 | 319 | AT1G66800 [Arabidopsis thalian | 0.972 | 0.658 | 0.502 | 2e-47 | |
| TAIR|locus:2122093 | 326 | DRL1 "dihydroflavonol 4-reduct | 0.990 | 0.656 | 0.394 | 6.5e-35 | |
| TAIR|locus:2056171 | 318 | AT2G02400 [Arabidopsis thalian | 0.972 | 0.660 | 0.372 | 5.8e-34 | |
| TAIR|locus:2200427 | 344 | CCR1 "cinnamoyl coa reductase | 0.986 | 0.619 | 0.359 | 9.5e-34 |
| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 117/216 (54%), Positives = 153/216 (70%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL SCAK S+KRVV+TSS+ A+ N P TPDV +DETWFS+P LC+ +K WY L
Sbjct: 108 GTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVL 167
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYI 120
+KTLAE+AAWK AKE G+D+V I+P VIGP QP LN A ILNLING ++F +
Sbjct: 168 SKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPNLSFG 227
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL-LRSGKLEEK-YQ 178
+V ++DV AHI+A EVP A+GRY L V HS+I+ LRE YP L L ++E Y
Sbjct: 228 WVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENPYV 287
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGF 214
PT +VS+++ +SLGI++ P +V ++ +ESL EKGF
Sbjct: 288 PTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGF 323
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 111/217 (51%), Positives = 148/217 (68%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVL SC K S+KRVVLTSSI A+ N P TP+ ++DETWF++P C+ +K WY L
Sbjct: 107 GTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVL 166
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYI 120
+KTLAE AAWKFAKEN + LV+I+P VIGP QP LN A +L+LI G Q+F +
Sbjct: 167 SKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTFPNATFG 226
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL-EEK-YQ 178
+V ++DV AHI+A E P A GRY L VA +S+++ L + YP K +EK Y
Sbjct: 227 WVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADEKIYI 286
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
PT KVS+E+A+SLG+ F P EV ++ +ESL +KGF+
Sbjct: 287 PTYKVSKEKAESLGVEFVPLEVSIKETVESLRDKGFI 323
|
|
| TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 104/217 (47%), Positives = 142/217 (65%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVL +C + S++RV+LTSS A+L + P+ V+DET+FS+P LC+E K WY L
Sbjct: 153 GTMNVLNTCKETPSVRRVILTSSTAAVLFRQPPVEASDVVDETFFSDPSLCRETKNWYPL 212
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP-YI 120
+K LAE AAW+FAK+NGID+V ++PG + GP QP LNF E+I++ ING F Y
Sbjct: 213 SKILAENAAWEFAKDNGIDMVVLNPGFIFGPLLQPTLNFSVELIVDFINGKNPFNSRFYR 272
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT 180
FV++RDV AHI+ALE P A+GRY++ G + SDI+ LRE P L + EE
Sbjct: 273 FVDVRDVALAHIKALETPSANGRYIIDGPIMSVSDIIDILRELLPDLCIADTNEESVMNE 332
Query: 181 I--KVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+ KV E+ K+LG+ FTP + +R I SL EK L
Sbjct: 333 MLCKVCVEKVKNLGVEFTPMKSSLRDTIVSLKEKCLL 369
|
|
| TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVLR+C KV S+KRV+LTSS+ A+L ET + P+ V+DET+F+NP +E K+WY L
Sbjct: 107 GTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVL 166
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-AFPYI 120
+KTLAE+AAW+FAK+N IDL+ ++PG V GP QP LNF VI+ L+ G F +
Sbjct: 167 SKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR 226
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL---RSGKLEEKY 177
FV++RDV AH++ALE P A+GRY++ G V DI LRE +P L R+ + E
Sbjct: 227 FVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELN 286
Query: 178 QPTIKVSQERAKSLGI-NFTPWEVGVRGCIESLMEK 212
T V ++ KSLGI FTP E +R + SL EK
Sbjct: 287 SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEK 322
|
|
| TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 107/214 (50%), Positives = 143/214 (66%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL++CAKV S+KRV++TSS+ A+L E + P+ ++DE+ FS+P C E K WY+L
Sbjct: 106 GTLNVLKTCAKVSSVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLWYAL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP-YI 120
+KTLAE+ AW+FAKE G+DLV I+PG V+GP +P L F VI+ LI G +F +
Sbjct: 166 SKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGKDNFINKDFR 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE-EKYQP 179
V++RDV AHI+A E P A+GRY++ G V +DI K LRE +P L K E + P
Sbjct: 226 LVDVRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNKGEASEIIP 285
Query: 180 TI-KVSQERAKSLGINFTPWEVGVRGCIESLMEK 212
I K+ E+ KSLGI FTP E +R I SL EK
Sbjct: 286 VIYKLCVEKVKSLGIEFTPTEATLRDTILSLKEK 319
|
|
| TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 101/217 (46%), Positives = 143/217 (65%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVL +C +V S+KRV+LTSS A+L + P+ P+ ++DET+FS+P LC+E K WYSL
Sbjct: 106 GTINVLNTCKQVSSVKRVILTSSTAAVLSRQPPIGPNDLVDETFFSDPSLCRETKNWYSL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI- 120
+K LAE AAW+FAK+NGID+V ++PG + GP QP LN E+I++ ING F Y
Sbjct: 166 SKILAENAAWQFAKDNGIDMVVLNPGFICGPLLQPTLNMSVELIVDFINGKNPFNKRYYR 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT 180
F ++RDV HI+ALE P A+GRY++ G +DI+ LR+ +P L + EE
Sbjct: 226 FSDVRDVALVHIKALETPSANGRYIIDGPNMSVNDIIDILRKLFPDLSIADTNEESEMNE 285
Query: 181 I--KVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+ +V E+ K+LG+ FTP + +R I SL EK L
Sbjct: 286 MICQVCVEKVKNLGVEFTPMKSSLRDTIVSLKEKCLL 322
|
|
| TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 109/217 (50%), Positives = 142/217 (65%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLR+CAKV S+KRV++TSS A L + P+ V+DET F++ + K WY
Sbjct: 106 GTLNVLRTCAKVSSVKRVIVTSSTAATL----SINPNDVVDETVFTDLSVYLAMKAWYGY 161
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING-DQSFAFPYI 120
+KTLAEE AW+FAKENGIDLV ++PG VIGP QP LN+ EVI++LING + S +F Y
Sbjct: 162 SKTLAEETAWRFAKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYR 221
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKY--Q 178
F+++RDV AHI+A EVP ASGRY+LA DI K L E +P L R K E +
Sbjct: 222 FMDVRDVSLAHIKAFEVPSASGRYILADPDVTMKDIQKLLHELFPDLCRVDKDNENEVGE 281
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
KV ++ KSLGI FTP + ++ + SL E+ L
Sbjct: 282 MAYKVCVDKLKSLGIEFTPIKESLKDTVVSLKERCLL 318
|
|
| TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 86/218 (39%), Positives = 127/218 (58%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLRSC K S+KRVVLTSS + + + P + +DE+ +++ LCK + WY+L
Sbjct: 106 GTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDD-FDPKIPLDESIWTSVELCKRFQVWYAL 164
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAF--P 118
+KTLAE+AAWKF++ENGIDLV + P ++GP P L A +L L+ G+ + F +
Sbjct: 165 SKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQ 224
Query: 119 YIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ 178
+V I DV HI E A GRY+ + +V +++ FL YP+L + E+ +
Sbjct: 225 MGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEKLNR 284
Query: 179 PTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
+ +SLG+ F E CI SL+E+G+LS
Sbjct: 285 LHYDFDTSKIQSLGLKFKSLEEMFDDCIASLVEQGYLS 322
|
|
| TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/220 (37%), Positives = 133/220 (60%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPVLCKENKEWYS 60
GT+NVL + AK +++RVV+TSSI A++ N P P+ V +DE+ +S+ CK ++WY
Sbjct: 103 GTINVLEA-AKRFNVRRVVITSSISALVPN--PNWPEKVPVDESSWSDLDFCKSRQKWYP 159
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPY 119
++KTLAE+AAW+F++++G ++V IHP T +GP QP LN V+L L+ G ++ +
Sbjct: 160 ISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHW 219
Query: 120 I-FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ 178
+ V ++DV H+ E P ASGR+L + Q S+ + + +P K +++ Q
Sbjct: 220 LGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQFSEFAALVSKLFPEFAVH-KFDKETQ 278
Query: 179 PTIKVSQERAK---SLGINFTPWEVGVRGCIESLMEKGFL 215
P + + AK LG+ FT E V+ ++SL +KGFL
Sbjct: 279 PGLTSCNDAAKRLIELGLVFTAVEDAVKETVQSLRDKGFL 318
|
|
| TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 79/220 (35%), Positives = 127/220 (57%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
G V+ + A+ +KRVV+TSSIGA+ ++ P+ V+DE+ +S+ CK K WY
Sbjct: 106 GAKFVINAAAEA-KVKRVVITSSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCY 163
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPY 119
K +AE+AAW+ AKE G+DLV ++P V+GP QP +N +L + G +++A
Sbjct: 164 GKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ 223
Query: 120 IFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQP 179
+V++RDV AH+ E P ASGRYLLA S ++++ L + +P K +++ P
Sbjct: 224 AYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNP 283
Query: 180 TIK---VSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
K + ++ K LG+ FT + + ++SL EKG L+
Sbjct: 284 RAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLA 323
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 216 | |||
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 1e-116 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 6e-71 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 2e-70 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 3e-68 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 9e-44 | |
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 1e-38 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 8e-37 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 9e-36 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 6e-30 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 4e-29 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 8e-26 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-20 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 2e-19 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-16 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 1e-14 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 4e-12 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-10 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 5e-07 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 5e-07 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-06 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 3e-04 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 332 bits (854), Expect = e-116
Identities = 135/222 (60%), Positives = 164/222 (73%), Gaps = 11/222 (4%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVLRSCAKV S+KRVV+TSS+ A+ N P+TPDVV+DETWFS+P C+E+K WY L
Sbjct: 105 GTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL 164
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYI 120
+KTLAEEAAWKFAKENGID+V I+P VIGP QP LN AE ILNLING Q+F Y
Sbjct: 165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYR 224
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK---- 176
+V++RDV AHI+A E+P ASGRY L V +S+++K L E YPTL +L EK
Sbjct: 225 WVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTL----QLPEKCADD 280
Query: 177 --YQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216
Y PT +VS+E+AKSLGI F P EV ++ +ESL EKGFLS
Sbjct: 281 KPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFLS 322
|
Length = 322 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 6e-71
Identities = 104/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVL +C + S+KRV+LTSS A+L + P+ + V+DET+FS+P LC+E K WY L
Sbjct: 106 GTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-AFPYI 120
+K LAE AAW+FAK+NGID+V ++PG + GP QP LNF E+I++ ING F Y
Sbjct: 166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYR 225
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT 180
FV++RDV AHI+ALE P A+GRY++ G + +DI+ LRE +P L + EE
Sbjct: 226 FVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNE 285
Query: 181 I--KVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215
+ KV E+ K+LG+ FTP + +R I SL EK L
Sbjct: 286 MICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKCLL 322
|
Length = 322 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 2e-70
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 9/197 (4%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLNVL +CAK S+KRVV TSS+ A++ N V+DE+ +S+ CK+ K WY+L
Sbjct: 99 GTLNVLEACAKAKSVKRVVFTSSVAAVVWNPNR-GEGKVVDESCWSDLDFCKKTKLWYAL 157
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD----QSFAF 117
+KTLAE+AAW+FA+ENG+DLV ++P V+GPF QP LN +++IL+L+ G+ Q+ +
Sbjct: 158 SKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSL 217
Query: 118 PYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKY 177
V + DV AHI E P ASGRY+ + V ++ L + YP K E+
Sbjct: 218 AL--VHVDDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQ 275
Query: 178 Q--PTIKVSQERAKSLG 192
+K+S ++ K LG
Sbjct: 276 PGVARVKLSSKKLKDLG 292
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 3e-68
Identities = 106/216 (49%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT+NVLR+C KV S+KRV+LTSS+ A+L ET + P+ V+DET+F+NP +E K+WY L
Sbjct: 107 GTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVL 166
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-AFPYI 120
+KTLAE+AAW+FAK+N IDL+ ++PG V GP QP LNF VI+ L+ G F +
Sbjct: 167 SKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR 226
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL---RSGKLEEKY 177
FV++RDV AH++ALE P A+GRY++ G V DI LRE +P L R+ + E
Sbjct: 227 FVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELN 286
Query: 178 QPTIKVSQERAKSLGI-NFTPWEVGVRGCIESLMEK 212
T V ++ KSLGI FTP E +R + SL EK
Sbjct: 287 SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEK 322
|
Length = 325 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 9e-44
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 9/197 (4%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YS 60
GTLNVL + S+KRVVLTSS+ A + + T P V E +++ + K N Y
Sbjct: 101 GTLNVLEAAKAAGSVKRVVLTSSVAA-VGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYI 159
Query: 61 LAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGP-FFQPILNFGAEVILNLINGDQSFA- 116
+KTLAE+AAW+F KEN +L+ I+PG V+GP LN E+I L++G
Sbjct: 160 ASKTLAEKAAWEFVKENKPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIP 219
Query: 117 --FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFLREHYPTLLRSGKL 173
P+ +V++RDV AH+RALE P+A+G R++++ +I LRE +P L
Sbjct: 220 PNLPFGYVDVRDVADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPA 279
Query: 174 EEKYQPTIKVSQERAKS 190
+I V + KS
Sbjct: 280 PNPLMLSILVKFDNRKS 296
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 136 bits (342), Expect = 1e-38
Identities = 76/206 (36%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75
+KRVV+TSSIGA+ ++ P+ V+DE+ +S+ CK K WY K +AE+AAW+ AK
Sbjct: 119 VKRVVITSSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAK 177
Query: 76 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIR 133
E G+DLV ++P V+GP QP +N +L + G +++A +V++RDV AH+
Sbjct: 178 EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVL 237
Query: 134 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQP---TIKVSQERAKS 190
E P ASGRYLLA S ++++ L + +P K +++ P K + ++ K
Sbjct: 238 VYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKD 297
Query: 191 LGINFTPWEVGVRGCIESLMEKGFLS 216
LG+ FT + + ++SL EKG L+
Sbjct: 298 LGLEFTSTKQSLYDTVKSLQEKGHLA 323
|
Length = 342 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (327), Expect = 8e-37
Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W- 58
GTLN L++ A S+KR VLTSS G++L+ + P +V+DE ++ + K+ W
Sbjct: 98 GTLNALKAAAAAKSVKRFVLTSSAGSVLIPK-PNVEGIVLDEKSWNLEEFDSDPKKSAWV 156
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA 116
Y+ +KTLAE+AAWKFA EN IDL+ + P IG F + ++LI G++ S A
Sbjct: 157 YAASKTLAEKAAWKFADENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPA 216
Query: 117 FPYI----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL 167
I +V + D+ AHI LE+P A GRY+ + +LK LR+ YP+
Sbjct: 217 LALIPPGYYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSY 271
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 9e-36
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 35/219 (15%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAM-----------LLNETPMTPDVVIDETWFSNPV 50
GTLNVL+SC K ++KRVV TSSI + +++ET TP ID W +
Sbjct: 116 GTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTP---IDHVWNTKAS 172
Query: 51 LCKENKEW-YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 109
W Y L+K L EEAA+K+AKENGIDLV++ TV GPF P + +V+L+ I
Sbjct: 173 ------GWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPI 226
Query: 110 NGDQSFAFPYI-----------FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILK 158
GD F + V I D+ AHI +E KA GRY+ S+++
Sbjct: 227 TGDSKL-FSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELIN 285
Query: 159 FLREHYPTLLRSGKLEEKYQPTIK--VSQERAKSLGINF 195
L + YP +L+E+ + +I +S ++ + LG +
Sbjct: 286 HLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEY 324
|
Length = 353 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 6e-30
Identities = 78/224 (34%), Positives = 118/224 (52%), Gaps = 14/224 (6%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW- 58
G L+++++CAK +++R+V TSS G + + E V DE +S+ C+ K W
Sbjct: 106 GMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP---VYDEDCWSDLDFCRRKKMTGWM 162
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ---SF 115
Y ++KTLAE+AAWK+A ENG+D ++I P V+GPF + L+LI G++ S
Sbjct: 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSI 222
Query: 116 AFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL---LRSGK 172
FV + D+ AHI E P A GRY+ + A D+ K LRE YP R
Sbjct: 223 IKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPG 282
Query: 173 LEEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
++E + ++ S ++ LG F E G IE+ EKG +
Sbjct: 283 IDEDLKS-VEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLI 325
|
Length = 351 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-29
Identities = 65/176 (36%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK-EW-Y 59
G NVL++CAK S+KRV+LTSS A+ +N+ T V+ ++ W L E W Y
Sbjct: 109 GVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY 168
Query: 60 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP----------ILNFGAEVILNLI 109
+KTLAE+AAWKFA+EN IDL+ + P + GP L G E ++N +
Sbjct: 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGL 228
Query: 110 NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYP 165
G Q + + DV AHI E ASGRY+ + ++ KFL + YP
Sbjct: 229 KGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYP 284
|
Length = 338 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 8e-26
Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
NVL +CA+ +I++VV TSS+ A++ + ++ +DE +S+ C++ K W++L
Sbjct: 106 AAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHAL 165
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF---QPILNFGAEVILNLINGDQSFAFP 118
AKTL+E+ AW A + G+++V+I+ G ++GP P L A++ N +
Sbjct: 166 AKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGV--------- 216
Query: 119 YIFVEIRDVVYAHIRALEVPKASGRYL-LAGSVAQHSDILKFLREHYPTLLRSGKLEEKY 177
+ V++ +V AHIRA E + GRYL V D +K + P + E
Sbjct: 217 LVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYE--M 274
Query: 178 QPTIKVSQER 187
Q + +V Q+R
Sbjct: 275 QGS-EVYQQR 283
|
Length = 297 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 1e-20
Identities = 65/243 (26%), Positives = 93/243 (38%), Gaps = 47/243 (19%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
GT NVL + + ++RVV TSSI A+ PD IDET N + Y
Sbjct: 89 EGTRNVLDAALE-AGVRRVVHTSSIAAL-----GGPPDGRIDETTPWNE---RPFPNDYY 139
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGA--EVILNLINGDQSFAFP 118
+K LAE + A E G+D+V ++P V GP + +L+ +NG P
Sbjct: 140 RSKLLAELEVLEAAAE-GLDVVIVNPSAVFGP---GDEGPTSTGLDVLDYLNGKLPAYPP 195
Query: 119 --YIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREH-----------YP 165
FV++RDV HI A+E + RY+L G + + L E
Sbjct: 196 GGTSFVDVRDVAEGHIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIPPW 255
Query: 166 TLLRSGKLEEKY------QPTIKVSQER----------AKS---LGINFTPWEVGVRGCI 206
L L E P + R K+ LG + P E +R +
Sbjct: 256 LLKAVAALSELKARLTGKPPLLTPRTARVLRRNYLYSSDKARRELGYSPRPLEEALRDTL 315
Query: 207 ESL 209
L
Sbjct: 316 AWL 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 2e-19
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEWYSLAK 63
NV+ +C + S+++ V TSS+ A + + P VIDE +S+ C++NK WY+L K
Sbjct: 161 NVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGK 220
Query: 64 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 94
AE+AAW+ A+ G+ L I P V GP F
Sbjct: 221 LKAEKAAWRAARGKGLKLATICPALVTGPGF 251
|
Length = 367 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 1e-16
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF-SNPVLCKENKEWY 59
GTLN+L + +KR V SS+ + P + IDE P+ Y
Sbjct: 94 DGTLNLLEAARA-AGVKRFVFASSVSVVY----GDPPPLPIDEDLGPPRPL------NPY 142
Query: 60 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILN----------LI 109
++K AE+ +A+ G+ +V + P V GP +P L+ G +I
Sbjct: 143 GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVI 202
Query: 110 NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHS--DILKFLREHYPTL 167
GD S +++V DV A + ALE P G + + A+ + ++ + + E +
Sbjct: 203 GGDGSQTRDFVYV--DDVADALLLALENPDG-GVFNIGSGTAEITVRELAEAVAEAVGSK 259
Query: 168 LRSGKLEEK-----YQPTIKVSQERAK-SLGIN-FTPWEVGVRGCIESLMEKG 213
+ + +A+ +LG E G+ +E L++K
Sbjct: 260 APLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 1e-14
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 18/149 (12%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+GTLN+L + K +KR V SS + +E P+ Y
Sbjct: 59 VGTLNLLEAARK-AGVKRFVYASSASV-----YGSPEGLPEEEETPPRPLSP------YG 106
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI 120
++K AE + + G+ +V + V GP +P L+ + +
Sbjct: 107 VSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGG 166
Query: 121 ------FVEIRDVVYAHIRALEVPKASGR 143
F+ + DVV A + ALE P G
Sbjct: 167 GNQTRDFIHVDDVVRAILHALENPLEGGG 195
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 4e-12
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT N+LR+ + ++RVV TSS+ + + DET P + Y
Sbjct: 92 GTRNLLRAALEA-GVERVVYTSSVATLGVRGDG----TPADET---TPSSLDDMIGHYKR 143
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP-YI 120
+K LAE+AA + A E G+ +V ++P T IGP G +I++ +NG P Y+
Sbjct: 144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTG-RIIVDFLNGK----MPAYV 198
Query: 121 -----FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLRE 162
V + DV H+ ALE + RY+L G IL L E
Sbjct: 199 DTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAE 245
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-10
Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 31/160 (19%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+GTL +L + + +KR V SS + D I E P+ Y+
Sbjct: 92 LGTLRLLEAARR-AGVKRFVFASS-SEVY----GDVADPPITEDTPLGPL------SPYA 139
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI----------- 109
AK AE +A+ G+ V + V GP F VI LI
Sbjct: 140 AAKLAAERLVEAYARAYGLRAVILRLFNVYGPG--NPDPFVTHVIPALIRRILEGKPILL 197
Query: 110 --NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147
+G Q +++V+ DV A + ALE P Y +
Sbjct: 198 LGDGTQR--RDFLYVD--DVARAILLALEHPDGGEIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 25/152 (16%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GT NVL +C + +++ V TSS + + D ET P + + Y+
Sbjct: 93 GTQNVLDACQRC-GVQKFVYTSSSSVIFGGQNIHNGD----ETL---PYP-PLDSDMYAE 143
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGP---FFQPILNFGAEVILN----LINGDQS 114
K +AE + + + A+ P + GP PIL E + G +
Sbjct: 144 TKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQGLVPILF---EWAEKGLVKFVFGRGN 200
Query: 115 FAFPYIFVEIRDVVYAHI---RALEVPK-ASG 142
+ +V ++ +AHI AL K SG
Sbjct: 201 NLVDFTYVH--NLAHAHILAAAALVKGKTISG 230
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 5e-07
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
GTLN+L + K +KR V SS ++ + + P DE NP+ Y++
Sbjct: 96 GTLNLLEAARKAG-VKRFVYASS-SSVYGDPPYL-P---KDEDHPPNPL------SPYAV 143
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-------ILNFGAEVILNL---ING 111
+K E FA+ G+ V++ V GP P I F + I G
Sbjct: 144 SKYAGELYCQVFARLYGLPTVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYG 203
Query: 112 D--QSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 144
D Q+ F Y+ DVV A++ A Y
Sbjct: 204 DGEQTRDFTYV----EDVVEANLLAATAGAGGEVY 234
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEW- 58
GTLNVL + A V KRVV TS+ +E DV IDE +P+L
Sbjct: 97 FGTLNVLEA-ACVLYRKRVVHTST------SEVYGTAQDVPIDE---DHPLLYINKPRSP 146
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVI---------LNLI 109
YS +K A+ A+ + + G+ + I P GP Q +I +NL
Sbjct: 147 YSASKQGADRLAYSYGRSFGLPVTIIRPFNTYGP-RQSARAVIPTIISQRAIGQRLINLG 205
Query: 110 NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 149
+G + F + ++D I L+ +A G + GS
Sbjct: 206 DGSPTRDFNF----VKDTARGFIDILDAIEAVGEIINNGS 241
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 32/180 (17%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
T + R+ A +KR V SS+ T P DET P + Y
Sbjct: 89 LTRRLARA-AARQGVKRFVFLSSVKVNG-EGTVGAP---FDETDPPAPQ------DAYGR 137
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF---------GAEVILNLINGD 112
+K AE A + +G+++V + P V GP + NF G + +
Sbjct: 138 SKLEAERALLELGASDGMEVVILRPPMVYGPGVRG--NFARLMRLIDRGLPLPPGAVKNR 195
Query: 113 QSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHS--DILKFLRE--HYPTLL 168
+S V + ++V A + +PKA+ L S +++ +R PT L
Sbjct: 196 RS------LVSLDNLVDAIYLCISLPKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRL 249
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 216 | |||
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.96 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.95 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.95 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.94 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.94 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.94 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.93 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.92 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.92 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.92 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.91 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.9 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.89 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.87 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.86 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.83 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.81 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.8 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.79 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.78 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.75 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.75 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.66 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.66 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.64 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.63 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.62 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.59 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.58 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.55 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.54 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.51 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.49 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.44 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.42 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.4 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.12 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.09 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.06 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.02 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.71 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.66 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.64 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.61 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.59 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.59 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.56 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.56 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.49 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.48 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.46 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.45 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.39 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.37 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.37 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.37 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.33 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.31 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.27 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.25 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.22 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.21 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.19 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.17 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.15 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.13 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.13 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.1 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.09 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.05 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.04 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.03 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.01 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.99 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.99 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.98 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.97 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.96 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.95 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.89 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.88 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.83 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.82 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.8 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.76 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.72 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.72 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 97.72 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.7 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.7 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.69 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.65 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.64 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.63 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.63 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.62 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.61 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.58 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.57 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.56 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.54 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.52 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.5 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.49 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.47 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.47 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.44 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.42 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.42 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.41 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.4 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.35 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.35 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.35 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.34 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.33 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.32 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.32 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.31 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.3 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.3 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.29 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.29 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.26 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.22 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.19 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.16 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.06 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.95 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 96.92 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.91 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.9 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.9 | |
| PRK08643 | 256 | acetoin reductase; Validated | 96.9 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 96.87 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.84 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 96.79 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.77 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 96.75 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.74 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.68 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.67 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.64 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 96.63 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 96.57 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.55 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 96.55 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.54 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.54 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.53 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.4 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.35 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 96.34 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.26 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.15 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.09 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.09 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 95.99 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 95.94 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 95.89 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.75 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 95.73 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.53 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 95.52 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 95.5 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.49 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 95.46 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 95.45 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 95.3 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 95.29 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 95.26 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.18 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 95.17 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.04 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 94.96 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 94.94 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.89 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 94.7 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.7 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.65 | |
| PLN00015 | 308 | protochlorophyllide reductase | 94.55 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 94.39 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 94.35 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 94.21 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 94.01 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 93.58 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.51 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.5 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 93.41 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.36 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.04 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 92.74 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 92.72 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 92.63 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 92.45 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 92.36 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 91.97 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 91.68 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 90.61 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 90.27 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 89.15 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 88.7 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 88.67 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 87.57 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 85.86 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 85.61 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 85.51 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 85.5 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 83.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 82.75 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 81.85 |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=225.34 Aligned_cols=216 Identities=46% Similarity=0.730 Sum_probs=189.9
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||.|+|++|.+.+.|+|||++||++++..+....++...++|++|.++........+|..||..+|+.+|+++++.+++
T Consensus 106 ~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~ 185 (327)
T KOG1502|consen 106 KGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLD 185 (327)
T ss_pred HHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 48999999999986799999999998888764555568899999999998776666899999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILK 158 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~ 158 (216)
.+++-|+.|+||...+..+.....+.++++|. ..++ ....|||++|+|.|++.+++.+...|+|+|+++..++.|+++
T Consensus 186 lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~~ei~~ 265 (327)
T KOG1502|consen 186 LVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVSIKEIAD 265 (327)
T ss_pred EEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecCcccHHHHHH
Confidence 99999999999999987777788889999997 6666 666799999999999999999999999999999888999999
Q ss_pred HHHHhCCCCCCCCCCcc---CCCCccccchHHHHHhC-CeeeehhhhHHHHHHHHHHcCCCC
Q 027969 159 FLREHYPTLLRSGKLEE---KYQPTIKVSQERAKSLG-INFTPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 159 ~i~~~~~~~~~~~~~~~---~~~~~~~~d~~k~~~lg-~~~~~~~~~i~~~~~~~~~~~~l~ 216 (216)
++.+.+|...+|..... .......++++|++.|| |++++++|++.++++++++.++++
T Consensus 266 ~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 266 ILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred HHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 99999998887765442 22233468999998887 788999999999999999999874
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=230.21 Aligned_cols=213 Identities=37% Similarity=0.664 Sum_probs=167.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++++|||+||.+++|+.... .+..+++|++|.....+..+.++|+.||..+|++++.+.++.++++
T Consensus 106 gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~-~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~ 183 (342)
T PLN02214 106 GAKFVINAAAEA-KVKRVVITSSIGAVYMDPNR-DPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183 (342)
T ss_pred HHHHHHHHHHhc-CCCEEEEeccceeeeccCCC-CCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 789999999998 88999999997579975431 1124688887654333334556799999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~ 159 (216)
+++||++||||+..+........+.....|. ..++ ..++|||++|+|++++.+++.+..+++||++++..++.|+++.
T Consensus 184 v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~el~~~ 263 (342)
T PLN02214 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEI 263 (342)
T ss_pred EEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHHHHHH
Confidence 9999999999987543222222333455666 5555 7789999999999999999887666788887778899999999
Q ss_pred HHHhCCCCCCCCCCc---cCCCCccccchHHHHHhCCeeeehhhhHHHHHHHHHHcCCCC
Q 027969 160 LREHYPTLLRSGKLE---EKYQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 160 i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~~~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+++.++...++.... .+......+|++|+++|||+|++++|+|+++++|+++.++|+
T Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 264 LAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred HHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcccCHHHHHHHHHHHHHHcCCCC
Confidence 999997655544322 233345568999997799999999999999999999999874
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=221.01 Aligned_cols=213 Identities=48% Similarity=0.843 Sum_probs=165.3
Q ss_pred cHHHHHHHHhccCCccEEEEccccccc-ccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~v-y~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|++.+++++|||+||.+.+ |+... ..++.+++|+++..+.....+.++|+.||..+|++++.+.++++++
T Consensus 106 gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~-~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~ 184 (322)
T PLN02986 106 GTINVLNTCKETPSVKRVILTSSTAAVLFRQPP-IEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGID 184 (322)
T ss_pred HHHHHHHHHHhcCCccEEEEecchhheecCCcc-CCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCe
Confidence 789999999885478999999997332 34321 1124568888876554222344679999999999999999888999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 159 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~ 159 (216)
++++||++||||...+..+....++..+..+...++ ..++|+|++|+|++++.+++.+..+++|+++++.+|+.|++++
T Consensus 185 ~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~ 264 (322)
T PLN02986 185 MVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDI 264 (322)
T ss_pred EEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHH
Confidence 999999999999876543344566667777764455 6678999999999999999887666789888888999999999
Q ss_pred HHHhCCCCCCCCCCccCCCCc--cccchHHHHHhCCeeeehhhhHHHHHHHHHHcCCC
Q 027969 160 LREHYPTLLRSGKLEEKYQPT--IKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 160 i~~~~~~~~~~~~~~~~~~~~--~~~d~~k~~~lg~~~~~~~~~i~~~~~~~~~~~~l 215 (216)
+.+.+|...++.......... ..+|++|++.|||+|++++|+++++++|+++.|++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 265 LRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred HHHHCCCCCCCCCCccccccccCCccCHHHHHHcCCcccCHHHHHHHHHHHHHHcCCC
Confidence 999998655543311111112 24899999779999999999999999999999985
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=209.87 Aligned_cols=203 Identities=17% Similarity=0.178 Sum_probs=170.9
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||.+|||++++....-||+|+||. .|||+.... +..++|.++..|- |||+.||+.+..++++|.+.+|++
T Consensus 103 ~GT~~LLEaar~~~~~frf~HISTD-EVYG~l~~~--~~~FtE~tp~~Ps------SPYSASKAasD~lVray~~TYglp 173 (340)
T COG1088 103 VGTYTLLEAARKYWGKFRFHHISTD-EVYGDLGLD--DDAFTETTPYNPS------SPYSASKAASDLLVRAYVRTYGLP 173 (340)
T ss_pred HHHHHHHHHHHHhcccceEEEeccc-cccccccCC--CCCcccCCCCCCC------CCcchhhhhHHHHHHHHHHHcCCc
Confidence 3899999999998222489999999 999997621 2378999988877 669999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
++|.|+++-|||...+.. .++.++.+++.|+ +.++ +.+||+||.|-|+|+..++.+...+.+||++ +...+--
T Consensus 174 ~~ItrcSNNYGPyqfpEK-lIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nl 252 (340)
T COG1088 174 ATITRCSNNYGPYQFPEK-LIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNL 252 (340)
T ss_pred eEEecCCCCcCCCcCchh-hhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCceEEeCCCccchHH
Confidence 999999999999998864 7788888888998 6777 5568999999999999999999887799776 6678999
Q ss_pred HHHHHHHHhCCCCCCC-----CCCc--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 155 DILKFLREHYPTLLRS-----GKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 155 el~~~i~~~~~~~~~~-----~~~~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
|+++.|++.+++..-. .... +.-...+.+|.+|+ ++|||+| .+++++|+++++|+.++.
T Consensus 253 evv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~ 320 (340)
T COG1088 253 EVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE 320 (340)
T ss_pred HHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence 9999999999654321 1111 23334678999999 9999999 999999999999998864
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=210.59 Aligned_cols=197 Identities=19% Similarity=0.198 Sum_probs=161.5
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||++||++|+++ ++++|||.||+ +|||.+. ..|++|+.+..|. |+||+||++.|++++.+.+.++++
T Consensus 96 ~gTl~Ll~am~~~-gv~~~vFSStA-avYG~p~----~~PI~E~~~~~p~------NPYG~sKlm~E~iL~d~~~a~~~~ 163 (329)
T COG1087 96 VGTLNLIEAMLQT-GVKKFIFSSTA-AVYGEPT----TSPISETSPLAPI------NPYGRSKLMSEEILRDAAKANPFK 163 (329)
T ss_pred HhHHHHHHHHHHh-CCCEEEEecch-hhcCCCC----CcccCCCCCCCCC------CcchhHHHHHHHHHHHHHHhCCCc
Confidence 3899999999999 99999999996 9999987 7899999988876 679999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-C---CCC---------CCCceeehhhhHHHHHHhhcCCCC
Q 027969 81 LVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-Q---SFA---------FPYIFVEIRDVVYAHIRALEVPKA 140 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~---~~~---------~~~~~i~v~D~a~~~~~~~~~~~~ 140 (216)
++++|.+++.|...... .+.+...+.....|+ + .|+ ..+|||||.|+|++++.+++.-..
T Consensus 164 ~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~ 243 (329)
T COG1087 164 VVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE 243 (329)
T ss_pred EEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh
Confidence 99999999999764321 123334444555555 2 332 346799999999999999975332
Q ss_pred Cc---eEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccchHHH-HHhCCee-e-ehhhhHHHHHHHHH
Q 027969 141 SG---RYLLA-GSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIESLM 210 (216)
Q Consensus 141 ~~---~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~~-~-~~~~~i~~~~~~~~ 210 (216)
+| +||++ |.-.|+.|+++.+.+..+ .++|.... ..+......|++|+ +.|||+| + ++++.+++...|..
T Consensus 244 ~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 244 GGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred CCceeEEEccCCCceeHHHHHHHHHHHhC-CcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 33 68776 888999999999999986 55554433 56667789999999 8899999 6 99999999999988
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=206.85 Aligned_cols=200 Identities=23% Similarity=0.267 Sum_probs=161.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||..|+++++..+++++|||+||. .|||+... .....|.+.++|. ++|+.||+++|..+++|.+.+++++
T Consensus 110 ~t~~Lle~~~~sg~i~~fvhvSTd-eVYGds~~---~~~~~E~s~~nPt------npyAasKaAaE~~v~Sy~~sy~lpv 179 (331)
T KOG0747|consen 110 STHVLLEAVRVSGNIRRFVHVSTD-EVYGDSDE---DAVVGEASLLNPT------NPYAASKAAAEMLVRSYGRSYGLPV 179 (331)
T ss_pred hhhhHHHHHHhccCeeEEEEeccc-ceecCccc---cccccccccCCCC------CchHHHHHHHHHHHHHHhhccCCcE
Confidence 789999999998899999999998 99999862 2222377777766 6799999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++|..+||||++.+.. .++.|+.....++ +..+ ..++|+|++|+++++..+++....+.+||++ ...++..|
T Consensus 180 v~~R~nnVYGP~q~~~k-lipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~ 258 (331)
T KOG0747|consen 180 VTTRMNNVYGPNQYPEK-LIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVID 258 (331)
T ss_pred EEEeccCccCCCcChHH-HhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCccceeeccCcchhhHHH
Confidence 99999999999987643 5567777555555 4444 5668999999999999999997767799665 77899999
Q ss_pred HHHHHHHhC----CCCCCCCCCc-----cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHc
Q 027969 156 ILKFLREHY----PTLLRSGKLE-----EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 156 l~~~i~~~~----~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.+.+.+ +..+.+.... +.....+.+|.+|++.|||+| ++++++|+++++|+.++
T Consensus 259 l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 259 LAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred HHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 998888876 2222222211 333345889999999999999 99999999999999775
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=214.11 Aligned_cols=214 Identities=61% Similarity=0.973 Sum_probs=167.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccc-cccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGA-MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~-vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+..++++|||+||+++ +|+.... .+..+++|+.+..+.......++|+.||..+|++++.+.+.++++
T Consensus 105 gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~-~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 183 (322)
T PLN02662 105 GTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPL-TPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGID 183 (322)
T ss_pred HHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCC-CCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCc
Confidence 78999999987647889999999733 4653221 123468888766654332333569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 159 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~ 159 (216)
++++||+++|||...+.......++..+..|...++ ..++|+|++|+|++++.+++.+...+.|++++..++++|+++.
T Consensus 184 ~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~~e~~~~ 263 (322)
T PLN02662 184 MVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKI 263 (322)
T ss_pred EEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCHHHHHHH
Confidence 999999999999865543344556666666655556 7789999999999999999876556678777888999999999
Q ss_pred HHHhCCCCCCCCCCc--cCCCCccccchHHHHHhCCeeeehhhhHHHHHHHHHHcCCCC
Q 027969 160 LREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 160 i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+.+.++...++.... ........+|++|++.|||++++++++++++++|++++|+++
T Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~~~ 322 (322)
T PLN02662 264 LHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFLS 322 (322)
T ss_pred HHHHCCCCCCCCCCCCccccccccccChHHHHHhCCccccHHHHHHHHHHHHHHcCCCC
Confidence 999987655443321 223455679999997799999999999999999999999874
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=213.74 Aligned_cols=214 Identities=49% Similarity=0.822 Sum_probs=163.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|.+..++++||++||.+.+++......+..+++|+.+..|.....+.++|+.||+.+|++++.+.+.+++++
T Consensus 107 g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 186 (325)
T PLN02989 107 GTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186 (325)
T ss_pred HHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeE
Confidence 68999999988535789999999833444321111245788988777653333346699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFL 160 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i 160 (216)
+++||++||||+..+..+....++..+..++..+. ..++|+|++|+|++++.+++.+...+.||+++..+|++|+++.+
T Consensus 187 ~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i 266 (325)
T PLN02989 187 IVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVL 266 (325)
T ss_pred EEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHH
Confidence 99999999999976543344566777777763344 55789999999999999998765556888888889999999999
Q ss_pred HHhCCCCCCCCCCc---cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCC
Q 027969 161 REHYPTLLRSGKLE---EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 161 ~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
.+.++...++.... +.....+..|++|++.|||.| ++++++|+++++|+++.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~ 325 (325)
T PLN02989 267 REFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV 325 (325)
T ss_pred HHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 99997544332111 111235678899996699999 99999999999999988764
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=213.90 Aligned_cols=199 Identities=16% Similarity=0.166 Sum_probs=155.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++++|||+||+ ++||... +.+..|+++..|. ++|+.||..+|++++.+.+.+++++
T Consensus 120 gt~nll~~~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 187 (348)
T PRK15181 120 GFLNMLTAARDA-HVSSFTYAASS-STYGDHP----DLPKIEERIGRPL------SPYAVTKYVNELYADVFARSYEFNA 187 (348)
T ss_pred HHHHHHHHHHHc-CCCeEEEeech-HhhCCCC----CCCCCCCCCCCCC------ChhhHHHHHHHHHHHHHHHHhCCCE
Confidence 799999999998 89999999997 9998754 4566777655443 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC---CCceEEEe-cC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK---ASGRYLLA-GS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~ 149 (216)
+++||++||||+..+.. ..++.++..+..++ . .++ ..++|+|++|+|+++++++..+. .+++||++ ++
T Consensus 188 ~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~ 267 (348)
T PRK15181 188 IGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGD 267 (348)
T ss_pred EEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCC
Confidence 99999999999875432 23467777777776 2 334 35689999999999998775432 34588776 77
Q ss_pred CCCHHHHHHHHHHhCCCCCC------CCC--CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 150 VAQHSDILKFLREHYPTLLR------SGK--LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~------~~~--~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
.+|++|+++.+.+.++.... +.. ..........+|.+|+ +.|||+| ++++|+++++++|++.+
T Consensus 268 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 268 RTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred cEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 89999999999988753211 000 0122333567899999 7799999 89999999999998764
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=206.31 Aligned_cols=214 Identities=32% Similarity=0.427 Sum_probs=157.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcc---cccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV---LCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
|+.+|+++|.+..++++|||+||. ++|+.........+++|+.+.... ....+.++|+.||.++|.+++.+++.++
T Consensus 109 g~~~ll~a~~~~~~~~~~v~~SS~-~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 187 (338)
T PLN00198 109 GVHNVLKACAKAKSVKRVILTSSA-AAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENN 187 (338)
T ss_pred HHHHHHHHHHhcCCccEEEEeecc-eeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcC
Confidence 789999999886468899999997 888753211113456676432110 0112345699999999999999998889
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC--------CCCceeehhhhHHHHHHhhcCCCCCceEEEec
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA--------FPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 148 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~--------~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 148 (216)
++++++||++||||+..........++..+..++ . ..+ +.++|+|++|+|++++.+++.+...+.|++++
T Consensus 188 ~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~ 267 (338)
T PLN00198 188 IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCA 267 (338)
T ss_pred ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCCcEEEec
Confidence 9999999999999986543222223444555554 1 111 23689999999999999998765556788888
Q ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCc-cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 149 SVAQHSDILKFLREHYPTLLRSGKLE-EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 149 ~~~s~~el~~~i~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
..+++.|+++.+.+.++...++.... ........+|.+|++.+||+| ++++++|+++++|+++.++++
T Consensus 268 ~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~~ 337 (338)
T PLN00198 268 ANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLLK 337 (338)
T ss_pred CCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCCC
Confidence 88999999999999987544443221 122334578999996679999 899999999999999999874
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-31 Score=206.55 Aligned_cols=209 Identities=34% Similarity=0.559 Sum_probs=154.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCcc-ccCCCCCCcc---cccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPV---LCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~-~~E~~~~~~~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
||.+|+++|.+...+++|||+||. ++|+.... ..+ ++|+.+.... ....+.++|+.||..+|.+++.+++.+
T Consensus 106 gt~~ll~aa~~~~~~~r~v~~SS~-~~~~~~~~---~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 181 (351)
T PLN02650 106 GMLSIMKACAKAKTVRRIVFTSSA-GTVNVEEH---QKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN 181 (351)
T ss_pred HHHHHHHHHHhcCCceEEEEecch-hhcccCCC---CCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc
Confidence 789999999987347899999997 55543221 233 5776543211 111223569999999999999999888
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHH--HHcCC-CCCC--CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILN--LINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQ 152 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~--~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s 152 (216)
+++++++||++||||+..... ...++.. ...+. ..+. +.++|+|++|+|++++.+++.+..++.|++++..++
T Consensus 182 gi~~~ilRp~~v~Gp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~~s 259 (351)
T PLN02650 182 GLDFISIIPTLVVGPFISTSM--PPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDAT 259 (351)
T ss_pred CCeEEEECCCceECCCCCCCC--CccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcCcCceEEecCCCcC
Confidence 999999999999999865421 1222222 23344 3333 557999999999999999987665668888888899
Q ss_pred HHHHHHHHHHhCCCCCCCCCCc--cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 153 HSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 153 ~~el~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+.|+++.+.+.++...++.... .........|++|++.|||+| ++++++|+++++|+++.+.+|
T Consensus 260 ~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 260 IHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred HHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 9999999999887554443321 123334567888888899999 899999999999999998874
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=201.09 Aligned_cols=214 Identities=37% Similarity=0.526 Sum_probs=152.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCC-CCccccCCCCCCcc---cccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMT-PDVVIDETWFSNPV---LCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~-~~~~~~E~~~~~~~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
||.+|+++|.+..++++||++||. ++|+...... ...+++|+.+.... ....+.++|+.||+++|++++.+.+.+
T Consensus 116 g~~~ll~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 194 (353)
T PLN02896 116 GTLNVLKSCLKSKTVKRVVFTSSI-STLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN 194 (353)
T ss_pred HHHHHHHHHHhcCCccEEEEEech-hhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc
Confidence 688999999887458899999997 8997542110 11456776332110 011133469999999999999999888
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---------CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---------FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
+++++++||++||||+..+..+.....+.....|. ..++ +.++|+|++|+|++++.+++.+...+.|+++
T Consensus 195 ~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~ 274 (353)
T PLN02896 195 GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICC 274 (353)
T ss_pred CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcCccEEec
Confidence 99999999999999987543222222222233454 2221 2358999999999999999876555678888
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 148 GSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+..+++.|+++.+++.++...+.... ......+..+|++|++.|||+| ++++++|+++++|+++.+.+|
T Consensus 275 ~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~~~~~ 346 (353)
T PLN02896 275 VDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLP 346 (353)
T ss_pred CCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHCCCCC
Confidence 88899999999999998643222111 1111123456888887799999 899999999999999998875
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=202.88 Aligned_cols=202 Identities=16% Similarity=0.155 Sum_probs=154.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ +|||+||+ +|||... ..+++|+.+... .+..+.+.|+.||..+|++++.+.+..++++
T Consensus 214 gT~nLleaa~~~-g~-r~V~~SS~-~VYg~~~----~~p~~E~~~~~~-~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~ 285 (436)
T PLN02166 214 GTLNMLGLAKRV-GA-RFLLTSTS-EVYGDPL----EHPQKETYWGNV-NPIGERSCYDEGKRTAETLAMDYHRGAGVEV 285 (436)
T ss_pred HHHHHHHHHHHh-CC-EEEEECcH-HHhCCCC----CCCCCccccccC-CCCCCCCchHHHHHHHHHHHHHHHHHhCCCe
Confidence 799999999998 75 89999997 9998754 457777743221 1112335699999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCC-CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPIL-NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++|+++|||++..... ..+..++.++..+. . .++ ..++|+|++|+|+++..+++.. ..+.||++ ++.+|+.
T Consensus 286 ~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~~giyNIgs~~~~Si~ 364 (436)
T PLN02166 286 RIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-HVGPFNLGNPGEFTML 364 (436)
T ss_pred EEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCceEEeCCCCcEeHH
Confidence 99999999999865322 23457777887777 2 334 3568999999999999999754 35688766 7789999
Q ss_pred HHHHHHHHhCCCCC-CCC-CCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLL-RSG-KLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~-~~~-~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+++.+++.++... +.. ...........+|++|+ +.|||+| ++++++++++++|++++
T Consensus 365 ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 365 ELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred HHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999986421 111 01122334567899999 7799999 99999999999999764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=196.23 Aligned_cols=202 Identities=16% Similarity=0.198 Sum_probs=155.4
Q ss_pred cHHHHHHHHhcc--------CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV--------HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~--------~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
||.+|+++|.+. +++++||++||. ++|+.... ...+++|+++..+. +.|+.||..+|.+++.+
T Consensus 104 gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~--~~~~~~E~~~~~p~------s~Y~~sK~~~e~~~~~~ 174 (355)
T PRK10217 104 GTYTLLEAARAYWNALTEDKKSAFRFHHISTD-EVYGDLHS--TDDFFTETTPYAPS------SPYSASKASSDHLVRAW 174 (355)
T ss_pred HHHHHHHHHHHhhhcccccccCceEEEEecch-hhcCCCCC--CCCCcCCCCCCCCC------ChhHHHHHHHHHHHHHH
Confidence 789999999762 257899999997 89986421 13468887665543 55999999999999999
Q ss_pred HHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-
Q 027969 74 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA- 147 (216)
Q Consensus 74 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~- 147 (216)
+++.+++++++||++||||+..+. ..+..++.+...+. +.++ ..++|+|++|+|+++..+++....+++||++
T Consensus 175 ~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~ 253 (355)
T PRK10217 175 LRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGG 253 (355)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCCCCeEEeCC
Confidence 888899999999999999997543 24556667777766 3334 4678999999999999999876555688776
Q ss_pred cCCCCHHHHHHHHHHhCCCCC--CCCC-------C-----ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHH
Q 027969 148 GSVAQHSDILKFLREHYPTLL--RSGK-------L-----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~--~~~~-------~-----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
++.+|++|+++.+++.++... .+.. . .........+|++|+ ++|||+| ++++|+++++++|++.
T Consensus 254 ~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~ 333 (355)
T PRK10217 254 HNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLA 333 (355)
T ss_pred CCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHh
Confidence 778999999999999875311 1110 0 011233467899999 8899999 9999999999999987
Q ss_pred cC
Q 027969 212 KG 213 (216)
Q Consensus 212 ~~ 213 (216)
+.
T Consensus 334 ~~ 335 (355)
T PRK10217 334 NE 335 (355)
T ss_pred CH
Confidence 63
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-29 Score=200.59 Aligned_cols=206 Identities=15% Similarity=0.100 Sum_probs=148.9
Q ss_pred cHHHHHHHHhccCCcc-EEEEcccccccccCCCCCCCCcccc------CCCCCCcccccccchhHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMTPDVVID------ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 74 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-~~i~~Ss~~~vy~~~~~~~~~~~~~------E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 74 (216)
||.+|+++|++. +++ +||++||. ++||......++.+++ |+++.. +..+.++|+.||+++|.+++.++
T Consensus 169 gt~nlleaa~~~-gv~~~~V~~SS~-~vYG~~~~~~~E~~i~~~~~~~e~~~~~---~~~P~s~Yg~SK~a~E~l~~~~~ 243 (442)
T PLN02572 169 GTLNVLFAIKEF-APDCHLVKLGTM-GEYGTPNIDIEEGYITITHNGRTDTLPY---PKQASSFYHLSKVHDSHNIAFTC 243 (442)
T ss_pred HHHHHHHHHHHh-CCCccEEEEecc-eecCCCCCCCcccccccccccccccccC---CCCCCCcchhHHHHHHHHHHHHH
Confidence 799999999998 775 89999997 9998642111111222 222111 22344679999999999999999
Q ss_pred HHcCCcEEEEcCCCccCCCCCCCC----------------CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHH
Q 027969 75 KENGIDLVAIHPGTVIGPFFQPIL----------------NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 75 ~~~~~~~~ilR~~~v~G~~~~~~~----------------~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~ 133 (216)
+.+|++++++||++||||+..... .....++.++..|+ . .++ ..++|+||+|+|++++.
T Consensus 244 ~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~ 323 (442)
T PLN02572 244 KAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEI 323 (442)
T ss_pred HhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHH
Confidence 988999999999999999864321 12345566677777 2 344 44599999999999999
Q ss_pred hhcCCCC-C--ceEEEecCCCCHHHHHHHHHHh---CCCC-C---CCCCCccCCCCccccchHHHHHhCCee-e---ehh
Q 027969 134 ALEVPKA-S--GRYLLAGSVAQHSDILKFLREH---YPTL-L---RSGKLEEKYQPTIKVSQERAKSLGINF-T---PWE 199 (216)
Q Consensus 134 ~~~~~~~-~--~~~~~~~~~~s~~el~~~i~~~---~~~~-~---~~~~~~~~~~~~~~~d~~k~~~lg~~~-~---~~~ 199 (216)
+++++.. + .+||++++.+|++|+++.+++. ++.. . .+.............|.+|+++|||+| + +++
T Consensus 324 al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~ 403 (442)
T PLN02572 324 AIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLL 403 (442)
T ss_pred HHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHH
Confidence 9986532 3 2577777789999999999998 6522 1 111111222234567899997799999 6 899
Q ss_pred hhHHHHHHHHHHc
Q 027969 200 VGVRGCIESLMEK 212 (216)
Q Consensus 200 ~~i~~~~~~~~~~ 212 (216)
+++.+++.|++++
T Consensus 404 ~~l~~~~~~~~~~ 416 (442)
T PLN02572 404 DSLLNFAVKYKDR 416 (442)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999864
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=192.39 Aligned_cols=195 Identities=19% Similarity=0.175 Sum_probs=147.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ +|||+||. ++|+... ..+.+|+++..|. ++|+.||..+|+.++.+.+..++++
T Consensus 96 ~t~~ll~~~~~~-~~-~~i~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 162 (308)
T PRK11150 96 YSKELLHYCLER-EI-PFLYASSA-ATYGGRT----DDFIEEREYEKPL------NVYGYSKFLFDEYVRQILPEANSQI 162 (308)
T ss_pred HHHHHHHHHHHc-CC-cEEEEcch-HHhCcCC----CCCCccCCCCCCC------CHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 689999999998 76 69999997 9998754 3456776655554 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCc--c-HHHHHHHHcCC-C-CCC----CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCC
Q 027969 82 VAIHPGTVIGPFFQPILNF--G-AEVILNLINGD-Q-SFA----FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 151 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~--~-~~~~~~~~~~~-~-~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 151 (216)
+++||++|||++..+.... . ..++..+.+|. + .++ ..++|+|++|+|++++.+++... ++.||++ +..+
T Consensus 163 ~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~-~~~yni~~~~~~ 241 (308)
T PRK11150 163 CGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV-SGIFNCGTGRAE 241 (308)
T ss_pred EEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC-CCeEEcCCCCce
Confidence 9999999999987542211 1 23345666666 3 232 24689999999999999987643 4688776 6779
Q ss_pred CHHHHHHHHHHhCCCCCCCC---CCc--cCCCCccccchHHHHHhCCee--eehhhhHHHHHHHHH
Q 027969 152 QHSDILKFLREHYPTLLRSG---KLE--EKYQPTIKVSQERAKSLGINF--TPWEVGVRGCIESLM 210 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~~~~---~~~--~~~~~~~~~d~~k~~~lg~~~--~~~~~~i~~~~~~~~ 210 (216)
|+.|+++.+.+.++..++.. ... ........+|++|++.+||+| ++++++|+++++|+.
T Consensus 242 s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 242 SFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred eHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 99999999999886322211 110 111223468999997789997 499999999999975
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=194.25 Aligned_cols=201 Identities=16% Similarity=0.122 Sum_probs=149.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCC--CCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW--FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~--~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|++. ++++|||+||. .+|+......++.+++|++ +..| .+.|+.+|..+|++++.+.+..++
T Consensus 116 ~t~nll~aa~~~-~vk~~V~~SS~-~vYg~~~~~~~~~~~~E~~~~p~~p------~s~Yg~sK~~~E~~~~~~~~~~g~ 187 (370)
T PLN02695 116 ISFNMLEAARIN-GVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEP------QDAYGLEKLATEELCKHYTKDFGI 187 (370)
T ss_pred HHHHHHHHHHHh-CCCEEEEeCch-hhcCCccccCcCCCcCcccCCCCCC------CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 689999999988 89999999997 9998753211123466654 2222 356999999999999999888899
Q ss_pred cEEEEcCCCccCCCCCCCC---CccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 80 DLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
+++++||++||||+..... .....++.++..+. ..++ ..++|+|++|+++++..+++.. ..+.||++ ++
T Consensus 188 ~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~~~~ 266 (370)
T PLN02695 188 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDE 266 (370)
T ss_pred CEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-CCCceEecCCC
Confidence 9999999999999754321 12345666666543 2333 4678999999999999988764 34578776 67
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCC-c-cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 150 VAQHSDILKFLREHYPTLLRSGKL-E-EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~~~~-~-~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
.+|++|+++.+.+..+... +... . ........+|++|+ +.|||+| .+++++|+++++|+++.
T Consensus 267 ~~s~~el~~~i~~~~g~~~-~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~ 332 (370)
T PLN02695 267 MVSMNEMAEIALSFENKKL-PIKHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQ 332 (370)
T ss_pred ceeHHHHHHHHHHHhCCCC-CceecCCCCCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999998876421 1111 0 11123456899999 7799999 89999999999998764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=197.79 Aligned_cols=203 Identities=17% Similarity=0.145 Sum_probs=153.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ +|||+||. .+|+... ..+.+|+.+.... +..+.+.|+.+|.++|+++..+.+..++++
T Consensus 213 gt~nLleaa~~~-g~-r~V~~SS~-~VYg~~~----~~p~~E~~~~~~~-P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~ 284 (442)
T PLN02206 213 GTLNMLGLAKRV-GA-RFLLTSTS-EVYGDPL----QHPQVETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGANVEV 284 (442)
T ss_pred HHHHHHHHHHHh-CC-EEEEECCh-HHhCCCC----CCCCCccccccCC-CCCccchHHHHHHHHHHHHHHHHHHhCCCe
Confidence 789999999998 75 89999997 9998754 4567777532211 112235699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCC-CCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPI-LNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++|+++|||++.... ...+..++.++..+. . .++ ..++|+|++|+|++++.+++.. ..+.||++ ++.+|+.
T Consensus 285 ~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~~sl~ 363 (442)
T PLN02206 285 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-HVGPFNLGNPGEFTML 363 (442)
T ss_pred EEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-CCceEEEcCCCceeHH
Confidence 9999999999985432 223456777777766 3 333 3568999999999999998764 35678766 7889999
Q ss_pred HHHHHHHHhCCCC-CCCC-CCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 155 DILKFLREHYPTL-LRSG-KLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 155 el~~~i~~~~~~~-~~~~-~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
|+++.+++.++.. .+.. ...........+|++|+ ++|||+| ++++|+|+++++|+++..
T Consensus 364 Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~ 426 (442)
T PLN02206 364 ELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRV 426 (442)
T ss_pred HHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhh
Confidence 9999999988532 2111 01122334567899999 7899999 899999999999997653
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=189.83 Aligned_cols=203 Identities=15% Similarity=0.173 Sum_probs=151.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccch-hHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE-WYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|.++ ++++|||+||+ .||+... ..+++|+++...+ ..+.+ +|+.||.++|++++.+.+..+++
T Consensus 80 ~~~~ll~~~~~~-~~~~~i~~SS~-~vyg~~~----~~~~~E~~~~~~~--~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~ 151 (306)
T PLN02725 80 IQTNVIDAAYRH-GVKKLLFLGSS-CIYPKFA----PQPIPETALLTGP--PEPTNEWYAIAKIAGIKMCQAYRIQYGWD 151 (306)
T ss_pred HHHHHHHHHHHc-CCCeEEEeCce-eecCCCC----CCCCCHHHhccCC--CCCCcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 789999999998 88999999997 9998654 5678888643311 11222 49999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCC---CCccHHHHHHH----HcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 81 LVAIHPGTVIGPFFQPI---LNFGAEVILNL----INGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~---~~~~~~~~~~~----~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
++++||++|||++.... ....+.++..+ ..+. .. ++ ..++|+|++|+++++..+++.....+.||++
T Consensus 152 ~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~ 231 (306)
T PLN02725 152 AISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEHVNVG 231 (306)
T ss_pred EEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCcceEeC
Confidence 99999999999985321 12334444332 3344 22 23 3568999999999999999875545567666
Q ss_pred -cCCCCHHHHHHHHHHhCCCCC-CCCCCc-cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHc
Q 027969 148 -GSVAQHSDILKFLREHYPTLL-RSGKLE-EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 148 -~~~~s~~el~~~i~~~~~~~~-~~~~~~-~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+..+++.|+++.+++.++... +..... ........+|++|++.|||+| ++++++++++++|++++
T Consensus 232 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 232 SGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred CCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 678999999999999885321 111111 112234578999997799999 89999999999999875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=208.35 Aligned_cols=203 Identities=19% Similarity=0.186 Sum_probs=155.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++.+.+++|||+||. .+||..... ...+.+|+++..|. ++|+.||..+|++++.+.+..++++
T Consensus 110 gt~~ll~a~~~~~~vkr~I~~SS~-~vyg~~~~~-~~~~~~E~~~~~p~------~~Y~~sK~~aE~~v~~~~~~~~l~~ 181 (668)
T PLN02260 110 GTHVLLEACKVTGQIRRFIHVSTD-EVYGETDED-ADVGNHEASQLLPT------NPYSATKAGAEMLVMAYGRSYGLPV 181 (668)
T ss_pred HHHHHHHHHHhcCCCcEEEEEcch-HHhCCCccc-cccCccccCCCCCC------CCcHHHHHHHHHHHHHHHHHcCCCE
Confidence 789999999998348999999997 999875410 01223565554443 5599999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++|||++..+. ..++.++..+..+. +.++ ..++|+|++|+|+++..+++....+++||++ ++.+++.|
T Consensus 182 vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~e 260 (668)
T PLN02260 182 ITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVID 260 (668)
T ss_pred EEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHH
Confidence 9999999999987542 23455666666666 2333 4568999999999999999876666788776 67899999
Q ss_pred HHHHHHHhCCCCC---CCC-CCccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 156 ILKFLREHYPTLL---RSG-KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 156 l~~~i~~~~~~~~---~~~-~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
+++.+++.++... +.. ...+.......+|++|+++|||+| ++++|+++++++|+++++
T Consensus 261 l~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 261 VAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred HHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 9999999986432 111 001222345568999998899999 999999999999998765
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=206.90 Aligned_cols=207 Identities=19% Similarity=0.228 Sum_probs=156.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccccc-ccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK-ENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|++. + ++|||+||. ++||... ..+++|+++..+..+. .+.+.|+.||+++|++++.+.+.++++
T Consensus 412 ~t~~ll~a~~~~-~-~~~V~~SS~-~vyg~~~----~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~ 484 (660)
T PRK08125 412 ENLKIIRYCVKY-N-KRIIFPSTS-EVYGMCT----DKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLR 484 (660)
T ss_pred HHHHHHHHHHhc-C-CeEEEEcch-hhcCCCC----CCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCc
Confidence 789999999998 6 799999997 9998654 4578888754321111 233569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC--C-CceEE
Q 027969 81 LVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK--A-SGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~--~-~~~~~ 145 (216)
++++||++||||+.... ...+..++.++..++ . .++ ..++|+|++|+|++++.+++++. . +++|+
T Consensus 485 ~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyn 564 (660)
T PRK08125 485 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIIN 564 (660)
T ss_pred eEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEE
Confidence 99999999999986421 123556777777776 2 233 46789999999999999998643 2 34787
Q ss_pred Ee-cC-CCCHHHHHHHHHHhCCCCC----CCCCCc-------------cCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 146 LA-GS-VAQHSDILKFLREHYPTLL----RSGKLE-------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 146 ~~-~~-~~s~~el~~~i~~~~~~~~----~~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
++ ++ .+|++|+++.+.+.++... ++.... ........+|++|+ +.|||+| .+++++|++
T Consensus 565 i~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~ 644 (660)
T PRK08125 565 IGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDE 644 (660)
T ss_pred cCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHHHHHhCCCCCCcHHHHHHH
Confidence 76 44 6999999999999986422 111100 01223345799999 7899999 999999999
Q ss_pred HHHHHHHcCCC
Q 027969 205 CIESLMEKGFL 215 (216)
Q Consensus 205 ~~~~~~~~~~l 215 (216)
+++|+++..-|
T Consensus 645 ~i~~~~~~~~~ 655 (660)
T PRK08125 645 TLDFFLRTVDL 655 (660)
T ss_pred HHHHHHhcccc
Confidence 99999987654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=192.10 Aligned_cols=201 Identities=17% Similarity=0.065 Sum_probs=153.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---- 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---- 77 (216)
|+.+++++|.+...+++||++||. .+|+.... ..+++|+++..|. ++|+.||..+|.+++.+++..
T Consensus 105 g~~~ll~a~~~~~~~~~iv~~SS~-~vyg~~~~---~~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 174 (349)
T TIGR02622 105 GTVNLLEAIRAIGSVKAVVNVTSD-KCYRNDEW---VWGYRETDPLGGH------DPYSSSKACAELVIASYRSSFFGVA 174 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEEech-hhhCCCCC---CCCCccCCCCCCC------CcchhHHHHHHHHHHHHHHHhhccc
Confidence 689999999887337899999997 89986431 3467777665543 559999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCC-----CCCceEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVP-----KASGRYL 145 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~-----~~~~~~~ 145 (216)
+++++++||++||||+.......++.++..+..|+ ..++ +.++|+|++|+|++++.+++.. ..++.||
T Consensus 175 ~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yn 254 (349)
T TIGR02622 175 NFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWN 254 (349)
T ss_pred ccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceee
Confidence 89999999999999986432335677778887777 3443 6779999999999999887642 1245888
Q ss_pred Eec---CCCCHHHHHHHHHHhCCCCCCCCCC-----ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 146 LAG---SVAQHSDILKFLREHYPTLLRSGKL-----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 146 ~~~---~~~s~~el~~~i~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++ .++++.|+++.+.+.++..++.... .........+|.+|+ +.|||+| ++++++|+++++|+++.
T Consensus 255 i~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~ 331 (349)
T TIGR02622 255 FGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW 331 (349)
T ss_pred eCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 763 5899999999999887643322111 122334567899999 7799999 89999999999998754
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=194.80 Aligned_cols=203 Identities=18% Similarity=0.187 Sum_probs=145.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCc---------------c-cccccchhHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP---------------V-LCKENKEWYSLAKTL 65 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~---------------~-~~~~~~~~Y~~sK~~ 65 (216)
||.+|+++|++. + ++|||+||. .+||... ..+++|+.+..+ . ....+.+.|+.||++
T Consensus 116 gt~~ll~aa~~~-~-~r~v~~SS~-~vYg~~~----~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~ 188 (386)
T PLN02427 116 DALPVVKYCSEN-N-KRLIHFSTC-EVYGKTI----GSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQL 188 (386)
T ss_pred HHHHHHHHHHhc-C-CEEEEEeee-eeeCCCc----CCCCCcccccccccccccccccccccccCCCCccccchHHHHHH
Confidence 688999999887 6 799999997 8998643 222333322111 0 001233569999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCCccCCCCCCC----------CCccHHHHHHHHcCCC--CCC---CCCceeehhhhHHH
Q 027969 66 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI----------LNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYA 130 (216)
Q Consensus 66 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----------~~~~~~~~~~~~~~~~--~~~---~~~~~i~v~D~a~~ 130 (216)
+|++++.+++.++++++++||++|||++.... ...+..++..+.++.+ .++ ..++|+|++|+|++
T Consensus 189 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~a 268 (386)
T PLN02427 189 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEA 268 (386)
T ss_pred HHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHH
Confidence 99999999888899999999999999985310 0112334455666662 333 34689999999999
Q ss_pred HHHhhcCCC-C-CceEEEe-c-CCCCHHHHHHHHHHhCCCCCC-C---C---CCc--------cCCCCccccchHHH-HH
Q 027969 131 HIRALEVPK-A-SGRYLLA-G-SVAQHSDILKFLREHYPTLLR-S---G---KLE--------EKYQPTIKVSQERA-KS 190 (216)
Q Consensus 131 ~~~~~~~~~-~-~~~~~~~-~-~~~s~~el~~~i~~~~~~~~~-~---~---~~~--------~~~~~~~~~d~~k~-~~ 190 (216)
++.+++++. . +++||++ + +.+|+.|+++.+.+.++.... + . ... .........|.+|+ ++
T Consensus 269 i~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 348 (386)
T PLN02427 269 VLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQ 348 (386)
T ss_pred HHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccccCccccchhhccCCHHHHHHh
Confidence 999998753 2 3478877 4 489999999999999864211 0 0 000 01234456799999 77
Q ss_pred hCCee-eehhhhHHHHHHHHHH
Q 027969 191 LGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 191 lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
|||+| ++++++|+++++|+++
T Consensus 349 lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 349 LGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred cCCCcCccHHHHHHHHHHHHHH
Confidence 99999 9999999999999765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=192.17 Aligned_cols=204 Identities=16% Similarity=0.188 Sum_probs=150.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcc-cccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV-LCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||++|+++|++. + ++|||+||+ .+||... ..+++|+++.... ....+.+.|+.||.++|+.++.+++.++++
T Consensus 98 ~~~~ll~aa~~~-~-~~~v~~SS~-~vyg~~~----~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 170 (347)
T PRK11908 98 ANLPIVRSAVKY-G-KHLVFPSTS-EVYGMCP----DEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLN 170 (347)
T ss_pred HHHHHHHHHHhc-C-CeEEEEecc-eeeccCC----CcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCC
Confidence 689999999998 6 699999997 8998754 4567776543211 111234569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC---CCceEE
Q 027969 81 LVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK---ASGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~ 145 (216)
++++||+++||++..+. ...+..++.++..+. . .+. ..++|+|++|+++++..+++++. .++.||
T Consensus 171 ~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yn 250 (347)
T PRK11908 171 FTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYN 250 (347)
T ss_pred eEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEE
Confidence 99999999999985431 123456666777776 2 222 45689999999999999998753 244788
Q ss_pred Eec--CCCCHHHHHHHHHHhCCCCC-C-------CCC-Cc--------cCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 146 LAG--SVAQHSDILKFLREHYPTLL-R-------SGK-LE--------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 146 ~~~--~~~s~~el~~~i~~~~~~~~-~-------~~~-~~--------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
+++ ..+|++|+++.+.+.++..+ + ... .. .........|.+|+ +.|||+| +++++++++
T Consensus 251 i~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~ 330 (347)
T PRK11908 251 IGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRR 330 (347)
T ss_pred eCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHHHHcCCCCCCcHHHHHHH
Confidence 774 36999999999998875321 1 000 00 01122455688999 8899999 899999999
Q ss_pred HHHHHHHc
Q 027969 205 CIESLMEK 212 (216)
Q Consensus 205 ~~~~~~~~ 212 (216)
+++|+++.
T Consensus 331 ~~~~~~~~ 338 (347)
T PRK11908 331 IFEAYRGH 338 (347)
T ss_pred HHHHHHHH
Confidence 99998765
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=189.69 Aligned_cols=204 Identities=16% Similarity=0.209 Sum_probs=153.4
Q ss_pred cHHHHHHHHhcc--------CCccEEEEcccccccccCCCCCC------CCccccCCCCCCcccccccchhHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV--------HSIKRVVLTSSIGAMLLNETPMT------PDVVIDETWFSNPVLCKENKEWYSLAKTLAE 67 (216)
Q Consensus 2 gt~~ll~~~~~~--------~~~~~~i~~Ss~~~vy~~~~~~~------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 67 (216)
||.+|+++|.+. .++++|||+||. ++|+...... ...+++|+++..|. +.|+.||..+|
T Consensus 103 gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~------~~Y~~sK~~~E 175 (352)
T PRK10084 103 GTYVLLEAARNYWSALDEDKKNAFRFHHISTD-EVYGDLPHPDEVENSEELPLFTETTAYAPS------SPYSASKASSD 175 (352)
T ss_pred HHHHHHHHHHHhccccccccccceeEEEecch-hhcCCCCccccccccccCCCccccCCCCCC------ChhHHHHHHHH
Confidence 789999999863 246799999997 8998631000 01236777655544 56999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 68 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 68 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
.+++.+++.++++++++|+++||||+..+. ..+..++..+..+. +.++ ..++|+|++|+|+++..+++....++
T Consensus 176 ~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~~~~ 254 (352)
T PRK10084 176 HLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGKAGE 254 (352)
T ss_pred HHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCCCCc
Confidence 999999888899999999999999986432 24566677777665 3333 56789999999999999998755556
Q ss_pred eEEEe-cCCCCHHHHHHHHHHhCCCCC---CC--CCCc-----cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHH
Q 027969 143 RYLLA-GSVAQHSDILKFLREHYPTLL---RS--GKLE-----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 209 (216)
Q Consensus 143 ~~~~~-~~~~s~~el~~~i~~~~~~~~---~~--~~~~-----~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~ 209 (216)
.|+++ ++.+++.|+++.+++.++... .+ .... ......+.+|++|+ +.|||+| ++++++|+++++|+
T Consensus 255 ~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~ 334 (352)
T PRK10084 255 TYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWY 334 (352)
T ss_pred eEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHH
Confidence 88776 678999999999998885321 11 0000 12223457899999 7799999 89999999999999
Q ss_pred HHcC
Q 027969 210 MEKG 213 (216)
Q Consensus 210 ~~~~ 213 (216)
+++.
T Consensus 335 ~~~~ 338 (352)
T PRK10084 335 LANT 338 (352)
T ss_pred HhCH
Confidence 8753
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=187.20 Aligned_cols=197 Identities=17% Similarity=0.087 Sum_probs=150.0
Q ss_pred cHHHHHHHHhccCCc---cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~---~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+|+++|.+. ++ ++|||+||+ ++||... ..+++|+.+..|. ++|+.||..+|.+++.++++++
T Consensus 108 gt~~ll~a~~~~-~~~~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~ 175 (343)
T TIGR01472 108 GTLRLLEAVRTL-GLIKSVKFYQASTS-ELYGKVQ----EIPQNETTPFYPR------SPYAAAKLYAHWITVNYREAYG 175 (343)
T ss_pred HHHHHHHHHHHh-CCCcCeeEEEeccH-HhhCCCC----CCCCCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHhC
Confidence 789999999987 54 389999997 9998754 4568888766554 5699999999999999988889
Q ss_pred CcEEEEcCCCccCCCCCCC--CCccHHHHHHHHcCC-C--CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 79 IDLVAIHPGTVIGPFFQPI--LNFGAEVILNLINGD-Q--SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~-~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
+++++.|+.++|||+.... ...+..++..+..|. . .++ ..++|+|++|+|++++.+++.+. .+.||++ ++
T Consensus 176 ~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-~~~yni~~g~ 254 (343)
T TIGR01472 176 LFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-PDDYVIATGE 254 (343)
T ss_pred CceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-CccEEecCCC
Confidence 9999999999999974321 112234455566665 2 223 56789999999999999997653 4577665 88
Q ss_pred CCCHHHHHHHHHHhCCCCC-C-------------------CCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 150 VAQHSDILKFLREHYPTLL-R-------------------SGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~-~-------------------~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
.+|++|+++.+++.++... + +... ..........|++|+ ++|||+| ++++|+|++
T Consensus 255 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~ 334 (343)
T TIGR01472 255 THSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKE 334 (343)
T ss_pred ceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHH
Confidence 8999999999999886321 0 0000 122223446799999 7899999 999999999
Q ss_pred HHHHHHH
Q 027969 205 CIESLME 211 (216)
Q Consensus 205 ~~~~~~~ 211 (216)
+++++++
T Consensus 335 ~~~~~~~ 341 (343)
T TIGR01472 335 MVEEDLE 341 (343)
T ss_pred HHHHHHh
Confidence 9999875
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=183.86 Aligned_cols=205 Identities=30% Similarity=0.358 Sum_probs=156.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.++++++.+. ++++||++||. .+|+... ...+++|+.+..+.. ..+.|+.+|.++|++++.+....++++
T Consensus 92 ~~~~l~~~~~~~-~~~~~v~~SS~-~~~~~~~---~~~~~~e~~~~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 163 (328)
T TIGR03466 92 GTRNLLRAALEA-GVERVVYTSSV-ATLGVRG---DGTPADETTPSSLDD---MIGHYKRSKFLAEQAALEMAAEKGLPV 163 (328)
T ss_pred HHHHHHHHHHHh-CCCeEEEEech-hhcCcCC---CCCCcCccCCCCccc---ccChHHHHHHHHHHHHHHHHHhcCCCE
Confidence 688999999988 88999999997 8898532 145788887655431 123599999999999999988789999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~ 159 (216)
+++||+++||++..... ....++.....+. +.+. ...+|+|++|+|+++..+++.+..+..|+++++.++++|+++.
T Consensus 164 ~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~ 242 (328)
T TIGR03466 164 VIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDK 242 (328)
T ss_pred EEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEecCCCcCHHHHHHH
Confidence 99999999999864321 2233444555554 4444 5678999999999999999876544478888889999999999
Q ss_pred HHHhCCCCC----CCCCCc----------------cC---------CCCccccchHHH-HHhCCeeeehhhhHHHHHHHH
Q 027969 160 LREHYPTLL----RSGKLE----------------EK---------YQPTIKVSQERA-KSLGINFTPWEVGVRGCIESL 209 (216)
Q Consensus 160 i~~~~~~~~----~~~~~~----------------~~---------~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~ 209 (216)
+.+.++... +|.... .+ ......+|++|+ +.|||+|++++++|+++++|+
T Consensus 243 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~i~~~~~~~ 322 (328)
T TIGR03466 243 LAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAREALRDAVEWF 322 (328)
T ss_pred HHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCcCHHHHHHHHHHHH
Confidence 999986431 221100 00 013457899999 889999999999999999999
Q ss_pred HHcCCC
Q 027969 210 MEKGFL 215 (216)
Q Consensus 210 ~~~~~l 215 (216)
++.|.|
T Consensus 323 ~~~~~~ 328 (328)
T TIGR03466 323 RANGYL 328 (328)
T ss_pred HHhCCC
Confidence 998865
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=173.81 Aligned_cols=204 Identities=17% Similarity=0.184 Sum_probs=165.4
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||.+++-.|++. + +||+++||+ .|||++. ..|..|+-|.+.- +..+.+.|...|..+|.++..|.++.|+.
T Consensus 120 igtln~lglakrv-~-aR~l~aSTs-eVYgdp~----~hpq~e~ywg~vn-pigpr~cydegKr~aE~L~~~y~k~~giE 191 (350)
T KOG1429|consen 120 IGTLNMLGLAKRV-G-ARFLLASTS-EVYGDPL----VHPQVETYWGNVN-PIGPRSCYDEGKRVAETLCYAYHKQEGIE 191 (350)
T ss_pred hhhHHHHHHHHHh-C-ceEEEeecc-cccCCcc----cCCCccccccccC-cCCchhhhhHHHHHHHHHHHHhhcccCcE
Confidence 4899999999998 7 799999997 9999976 6777777554422 22455669999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCC-CccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHH
Q 027969 81 LVAIHPGTVIGPFFQPIL-NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHS 154 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~ 154 (216)
+.|.|+.+.|||..+-.. ...+.++..+++++ ..++ +.++|.||+|++++++++++++..+.++++.++.+|+.
T Consensus 192 ~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~ 271 (350)
T KOG1429|consen 192 VRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGPVNIGNPGEFTML 271 (350)
T ss_pred EEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCCcccCCccceeHH
Confidence 999999999999865432 34567888888888 4555 45579999999999999999887666666678899999
Q ss_pred HHHHHHHHhCCCCCCCCCC--ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
||++++.+..+....+... .+.+.....-|++++ +.|||.| .+++|++..++.|++++
T Consensus 272 elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~ 333 (350)
T KOG1429|consen 272 ELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRER 333 (350)
T ss_pred HHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHH
Confidence 9999999998544323222 145566788999999 7899999 99999999999998764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=184.15 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=154.1
Q ss_pred cHHHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
|+.+++++|.+. .. .++|++||. .+||.... ..+++|+++..+. +.|+.+|..+|.+++.+++..+++
T Consensus 103 ~~~~l~~~~~~~-~~~~~~i~~Ss~-~v~g~~~~---~~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~ 171 (317)
T TIGR01181 103 GTYTLLEAVRKY-WHEFRFHHISTD-EVYGDLEK---GDAFTETTPLAPS------SPYSASKAASDHLVRAYHRTYGLP 171 (317)
T ss_pred HHHHHHHHHHhc-CCCceEEEeecc-ceeCCCCC---CCCcCCCCCCCCC------CchHHHHHHHHHHHHHHHHHhCCC
Confidence 678999999886 32 279999997 89987541 2367787665543 459999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
++++||+.+||+...+. ...+.++..+..+. +.++ ..++|+|++|+|+++..++++...+++|+++ ++.++++
T Consensus 172 ~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (317)
T TIGR01181 172 ALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNL 250 (317)
T ss_pred eEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHH
Confidence 99999999999986543 24556677777776 2333 4568999999999999999876555688776 6789999
Q ss_pred HHHHHHHHhCCCCCC--CCCC-ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcCC
Q 027969 155 DILKFLREHYPTLLR--SGKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGF 214 (216)
Q Consensus 155 el~~~i~~~~~~~~~--~~~~-~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~~ 214 (216)
|+++.+.+.++.... .... .........+|++|+ +.|||+| ++++++++++++|+++++.
T Consensus 251 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~ 315 (317)
T TIGR01181 251 EVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEW 315 (317)
T ss_pred HHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccC
Confidence 999999999974321 1100 111222346899999 7899999 8999999999999988764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=184.55 Aligned_cols=199 Identities=19% Similarity=0.176 Sum_probs=149.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 80 (216)
|+.+++++|.+. ++++||++||+ .+|+... ..+++|+.+..+. +.|+.||..+|++++.+.+. .+++
T Consensus 111 ~~~~l~~~~~~~-~~~~~v~~Ss~-~vyg~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 178 (352)
T PLN02240 111 GTINLLEVMAKH-GCKKLVFSSSA-TVYGQPE----EVPCTEEFPLSAT------NPYGRTKLFIEEICRDIHASDPEWK 178 (352)
T ss_pred HHHHHHHHHHHc-CCCEEEEEccH-HHhCCCC----CCCCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 678999999988 88899999997 9998654 5678998776654 45999999999999988754 4799
Q ss_pred EEEEcCCCccCCCCC------CC--CCccHHHHHHHHcCC-CCC---------C---CCCceeehhhhHHHHHHhhcC--
Q 027969 81 LVAIHPGTVIGPFFQ------PI--LNFGAEVILNLINGD-QSF---------A---FPYIFVEIRDVVYAHIRALEV-- 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~------~~--~~~~~~~~~~~~~~~-~~~---------~---~~~~~i~v~D~a~~~~~~~~~-- 137 (216)
++++|++++||++.. +. ...+..++..+..+. +.+ + ..++|+|++|+|++++.++..
T Consensus 179 ~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~ 258 (352)
T PLN02240 179 IILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLF 258 (352)
T ss_pred EEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhh
Confidence 999999999997531 10 112234455555443 222 1 346799999999999988864
Q ss_pred --CCCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHH
Q 027969 138 --PKAS-GRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIES 208 (216)
Q Consensus 138 --~~~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~ 208 (216)
+... ++||++ ++.+|++|+++.+.+.++.. .+... .........+|++|+ ++|||+| .+++++|+++++|
T Consensus 259 ~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~ 337 (352)
T PLN02240 259 TDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK-IPLKLAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNW 337 (352)
T ss_pred hccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC-CCceeCCCCCCChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 2233 478776 78899999999999998632 12111 122234456799999 7899999 7999999999999
Q ss_pred HHHcC
Q 027969 209 LMEKG 213 (216)
Q Consensus 209 ~~~~~ 213 (216)
+++++
T Consensus 338 ~~~~~ 342 (352)
T PLN02240 338 ASKNP 342 (352)
T ss_pred HHhCc
Confidence 98875
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=182.58 Aligned_cols=197 Identities=16% Similarity=0.019 Sum_probs=149.7
Q ss_pred cHHHHHHHHhccCCcc-----EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIK-----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-----~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
||.+|+++|.+. +++ +||++||. ++||... .+++|+.+..|. +.|+.||.++|.+++.++++
T Consensus 113 gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~-~vyg~~~-----~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~ 179 (340)
T PLN02653 113 GALRLLEAVRLH-GQETGRQIKYYQAGSS-EMYGSTP-----PPQSETTPFHPR------SPYAVAKVAAHWYTVNYREA 179 (340)
T ss_pred HHHHHHHHHHHh-ccccccceeEEEeccH-HHhCCCC-----CCCCCCCCCCCC------ChhHHHHHHHHHHHHHHHHH
Confidence 789999999987 654 89999997 9998764 277888766554 56999999999999999988
Q ss_pred cCCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-C-CC-C---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-
Q 027969 77 NGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-Q-SF-A---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA- 147 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~-~~-~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~- 147 (216)
++++++..|+.++|||+..... ..+..++..+..+. . .+ + ..++|+|++|+|+++..+++... ++.||++
T Consensus 180 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~ 258 (340)
T PLN02653 180 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK-PDDYVVAT 258 (340)
T ss_pred cCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC-CCcEEecC
Confidence 8999999999999999754321 01223344555665 2 22 3 45789999999999999998653 4567665
Q ss_pred cCCCCHHHHHHHHHHhCCCC---CCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 148 GSVAQHSDILKFLREHYPTL---LRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~---~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
++.+|++|+++.+.+..+.. .+.... .........+|++|+ +.|||+| ++++++|+++++|+++.
T Consensus 259 g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~ 331 (340)
T PLN02653 259 EESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLEL 331 (340)
T ss_pred CCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 88899999999999998632 111111 122334556899999 7899999 89999999999988753
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=176.86 Aligned_cols=185 Identities=29% Similarity=0.489 Sum_probs=139.3
Q ss_pred cHHHHHHHHhccCCccEEEEccccccc-ccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~v-y~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+..++++||++||.+++ |+... .....+++|++|..+.....+..+|+.||.++|++++.+.+..+++
T Consensus 106 gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~ 184 (297)
T PLN02583 106 AAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDN-ISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVN 184 (297)
T ss_pred HHHHHHHHHHhcCCccEEEEecchHheeccccc-CCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 799999999886468899999998444 23111 0124578888776554332233469999999999999998877999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCC-HHHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQ-HSDIL 157 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s-~~el~ 157 (216)
++++||++||||...... ....+. ..++ +.++|||++|+|++++++++.+...++|+++++..+ +.+++
T Consensus 185 ~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~ 256 (297)
T PLN02583 185 MVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAV 256 (297)
T ss_pred EEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHH
Confidence 999999999999864321 123344 4445 677899999999999999998777779999877655 67899
Q ss_pred HHHHHhCCCCCCCCCCc--cCCCCccccchHHHHHhCCee
Q 027969 158 KFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF 195 (216)
Q Consensus 158 ~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~ 195 (216)
+++.+.+|..+++.... ........++++|+++||+++
T Consensus 257 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 257 KLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred HHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence 99999999887765321 133456789999999999874
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=180.16 Aligned_cols=191 Identities=26% Similarity=0.431 Sum_probs=140.6
Q ss_pred cHHHHHHHHhccCCccEEEEccccc-ccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIG-AMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~-~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|++..++++|||+||.+ .+|+.........+++|+++.....+..+.++|+.||+.+|++++.+++..+++
T Consensus 158 gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~ 237 (367)
T PLN02686 158 ASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLK 237 (367)
T ss_pred HHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCce
Confidence 6899999999854799999999963 578642110001347777655433333455679999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCC---CCCceEEEecCCCCHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVP---KASGRYLLAGSVAQHSD 155 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~s~~e 155 (216)
++++||++||||+..... ...+.....+. ..++ +.++|+||+|+|++++.+++.. ..+++|+++++.++++|
T Consensus 238 ~v~lRp~~vyGp~~~~~~---~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~~~s~~e 314 (367)
T PLN02686 238 LATICPALVTGPGFFRRN---STATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSRED 314 (367)
T ss_pred EEEEcCCceECCCCCCCC---ChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCCCccHHH
Confidence 999999999999864321 12233455666 5556 7778999999999999999742 33457888899999999
Q ss_pred HHHHHHHhCCCCC-C-CCCCc-cCCCCccccchHHH-HHhCCee
Q 027969 156 ILKFLREHYPTLL-R-SGKLE-EKYQPTIKVSQERA-KSLGINF 195 (216)
Q Consensus 156 l~~~i~~~~~~~~-~-~~~~~-~~~~~~~~~d~~k~-~~lg~~~ 195 (216)
+++.+.+.++... . ..... ..+...+.+|++|+ ++|||+|
T Consensus 315 ~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 315 EAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTR 358 (367)
T ss_pred HHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHHhh
Confidence 9999999986321 1 11111 34566788999999 8899987
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-26 Score=175.69 Aligned_cols=201 Identities=25% Similarity=0.339 Sum_probs=154.9
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCC-CCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW-FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~-~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
.||.+++++|++. ++++|||+||. ++|+... ...+++|+. +..|. ++|+.||+++|+.++.+.+.+++
T Consensus 94 ~gt~~ll~aa~~~-~~~~~v~~ss~-~~~~~~~---~~~~~~E~~~~~~p~------~~Yg~sK~~~E~~~~~~~~~~~~ 162 (314)
T COG0451 94 DGTLNLLEAARAA-GVKRFVFASSV-SVVYGDP---PPLPIDEDLGPPRPL------NPYGVSKLAAEQLLRAYARLYGL 162 (314)
T ss_pred HHHHHHHHHHHHc-CCCeEEEeCCC-ceECCCC---CCCCcccccCCCCCC------CHHHHHHHHHHHHHHHHHHHhCC
Confidence 3799999999996 89999998886 6555432 145888884 44443 36999999999999999987799
Q ss_pred cEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCCC--CCC----CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC-
Q 027969 80 DLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQ--SFA----FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS- 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~--~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~- 149 (216)
+++++||++|||+++.+... ....++..+..+.+ .+. ..++|+|++|++++++.+++++... .|+++ +.
T Consensus 163 ~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~~~~ 241 (314)
T COG0451 163 PVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-VFNIGSGTA 241 (314)
T ss_pred CeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-EEEeCCCCC
Confidence 99999999999999876522 23344555666653 222 2347999999999999999987666 88777 44
Q ss_pred CCCHHHHHHHHHHhCCCCCC-----CCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 150 VAQHSDILKFLREHYPTLLR-----SGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~-----~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
..+++|+++.+.+.++.... +............+|..|+ +.|||.| .++++++.+++.|+....
T Consensus 242 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 242 EITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred cEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 79999999999999864422 1101234445678999999 7899999 899999999999987754
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=176.75 Aligned_cols=195 Identities=19% Similarity=0.129 Sum_probs=144.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH--HcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK--ENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~ 79 (216)
||.+|+++|.+. ++ +|||+||. ++|+... .+++|+++.. .+.+.|+.||..+|.+++++.. ..++
T Consensus 94 ~~~~ll~~~~~~-~~-~~v~~SS~-~vy~~~~-----~~~~e~~~~~-----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 160 (314)
T TIGR02197 94 YSKRLLDWCAEK-GI-PFIYASSA-ATYGDGE-----AGFREGRELE-----RPLNVYGYSKFLFDQYVRRRVLPEALSA 160 (314)
T ss_pred HHHHHHHHHHHh-CC-cEEEEccH-HhcCCCC-----CCcccccCcC-----CCCCHHHHHHHHHHHHHHHHhHhhccCC
Confidence 789999999998 76 79999997 8998753 3566665432 1235699999999999988643 2367
Q ss_pred cEEEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-C-CC------C---CCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 80 DLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-Q-SF------A---FPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~-~~------~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
+++++|+++|||++..... +....++..+..+. . .+ + ..++|+|++|+++++..++.. ...+.||
T Consensus 161 ~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~~~~yn 239 (314)
T TIGR02197 161 QVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GVSGIFN 239 (314)
T ss_pred ceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-ccCceEE
Confidence 9999999999999865321 12345566666665 2 21 2 346899999999999999987 4456887
Q ss_pred Ee-cCCCCHHHHHHHHHHhCCCCC----CCCCCc--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 146 LA-GSVAQHSDILKFLREHYPTLL----RSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 146 ~~-~~~~s~~el~~~i~~~~~~~~----~~~~~~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
++ ++++|++|+++.+++.++... .+.... ........+|++|+ +.|||+| ++++++++++++|+.
T Consensus 240 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 240 LGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred cCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 76 678999999999999986321 111111 11223456899999 7789999 999999999999975
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=178.24 Aligned_cols=198 Identities=15% Similarity=0.169 Sum_probs=146.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCC-CcccccccchhHHHHHHHHHHHHHHHHHHc-CC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS-NPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~-~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~ 79 (216)
|+.+|+++|++. ++++||++||+ .+|+... ..+++|+++. .+. +.|+.+|..+|++++.+++.. ++
T Consensus 103 ~~~~l~~~~~~~-~~~~~v~~Ss~-~~yg~~~----~~~~~E~~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~ 170 (338)
T PRK10675 103 GTLRLISAMRAA-NVKNLIFSSSA-TVYGDQP----KIPYVESFPTGTPQ------SPYGKSKLMVEQILTDLQKAQPDW 170 (338)
T ss_pred HHHHHHHHHHHc-CCCEEEEeccH-HhhCCCC----CCccccccCCCCCC------ChhHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999998 88999999997 8998654 5678888765 232 559999999999999987654 79
Q ss_pred cEEEEcCCCccCCCCCCC--------CCccHHHHHHHHcCC-CC-------C--C---CCCceeehhhhHHHHHHhhcCC
Q 027969 80 DLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD-QS-------F--A---FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~-~~-------~--~---~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++|++++||+..... ...+..++.++..+. .. + + +.++|+|++|+|++++.+++..
T Consensus 171 ~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~ 250 (338)
T PRK10675 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKL 250 (338)
T ss_pred cEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhh
Confidence 999999999999742110 011233444454443 21 1 1 3468999999999999998752
Q ss_pred --CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHH
Q 027969 139 --KAS-GRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 209 (216)
Q Consensus 139 --~~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~ 209 (216)
..+ ++||++ ++.+|+.|+++.+.+.++.. ++... .........+|++|+ +.+||+| .+++++++++++|+
T Consensus 251 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~ 329 (338)
T PRK10675 251 ANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQ 329 (338)
T ss_pred hccCCCceEEecCCCceeHHHHHHHHHHHhCCC-CCeeeCCCCCCchhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHH
Confidence 223 478776 77899999999999998642 11111 122334567899999 7899999 99999999999999
Q ss_pred HHc
Q 027969 210 MEK 212 (216)
Q Consensus 210 ~~~ 212 (216)
.++
T Consensus 330 ~~~ 332 (338)
T PRK10675 330 SRH 332 (338)
T ss_pred Hhh
Confidence 874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=174.74 Aligned_cols=189 Identities=16% Similarity=0.154 Sum_probs=140.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ +|||+||. .||+... ..|++|+++..|. +.|+.||+.+|++++.+. .++
T Consensus 84 ~~~~l~~aa~~~-g~-~~v~~Ss~-~Vy~~~~----~~p~~E~~~~~P~------~~Yg~sK~~~E~~~~~~~----~~~ 146 (299)
T PRK09987 84 SVEAIAKAANEV-GA-WVVHYSTD-YVFPGTG----DIPWQETDATAPL------NVYGETKLAGEKALQEHC----AKH 146 (299)
T ss_pred HHHHHHHHHHHc-CC-eEEEEccc-eEECCCC----CCCcCCCCCCCCC------CHHHHHHHHHHHHHHHhC----CCE
Confidence 789999999998 75 79999997 9998754 5689998876665 569999999999998764 467
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-----CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-----FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~ 153 (216)
+++|+++|||++.. +....++..+.+++ ..++ ..+.+.+++|+++++..++......++||++ ++.+|+
T Consensus 147 ~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~ 223 (299)
T PRK09987 147 LIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTW 223 (299)
T ss_pred EEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccH
Confidence 99999999999753 24455666666665 2222 2234567888899988888665445788766 788999
Q ss_pred HHHHHHHHHhCCCC--CC------CCC-----CccCCCCccccchHHH-HHhCCeeeehhhhHHHHHHHHH
Q 027969 154 SDILKFLREHYPTL--LR------SGK-----LEEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 210 (216)
Q Consensus 154 ~el~~~i~~~~~~~--~~------~~~-----~~~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~ 210 (216)
.|+++.+.+.++.. .. +.. ..........+|++|+ +.|||+|++|+++|+++++.+.
T Consensus 224 ~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~~l~~~~~~~~ 294 (299)
T PRK09987 224 HDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLTELF 294 (299)
T ss_pred HHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHHHHHHHHHHHHh
Confidence 99999997754211 11 110 0122345668999999 6799999999999999997653
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=171.79 Aligned_cols=188 Identities=17% Similarity=0.141 Sum_probs=142.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|.+. ++ +||++||. ++|+... ..+++|+++..+. +.|+.+|..+|+.++.+ ++++
T Consensus 80 ~~~~l~~~~~~~-~~-~~v~~Ss~-~vy~~~~----~~~~~E~~~~~~~------~~Y~~~K~~~E~~~~~~----~~~~ 142 (287)
T TIGR01214 80 APQNLARAAARH-GA-RLVHISTD-YVFDGEG----KRPYREDDATNPL------NVYGQSKLAGEQAIRAA----GPNA 142 (287)
T ss_pred HHHHHHHHHHHc-CC-eEEEEeee-eeecCCC----CCCCCCCCCCCCc------chhhHHHHHHHHHHHHh----CCCe
Confidence 689999999987 64 89999997 9997654 5688898766554 56999999999999776 6899
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCC-CCCceEEEe-cCCCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVP-KASGRYLLA-GSVAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~-~~~~s~~el 156 (216)
+++||++|||++... +....++..+..+. ...+ ..++++|++|+|+++..++..+ ..++.||++ ++.+++.|+
T Consensus 143 ~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~ 220 (287)
T TIGR01214 143 LIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEF 220 (287)
T ss_pred EEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHH
Confidence 999999999998532 23344555555554 2233 5678999999999999999876 346678666 778999999
Q ss_pred HHHHHHhCCCCCCCCC---C--------c--cCCCCccccchHHH-HHhCCeeeehhhhHHHHHHH
Q 027969 157 LKFLREHYPTLLRSGK---L--------E--EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIES 208 (216)
Q Consensus 157 ~~~i~~~~~~~~~~~~---~--------~--~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~ 208 (216)
++.+.+.++....... . . ........+|++|+ +.|||+++++++++.++++.
T Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 221 AQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYLQE 286 (287)
T ss_pred HHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence 9999999865432100 0 0 11123467999999 77999669999999988753
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=176.27 Aligned_cols=192 Identities=14% Similarity=0.057 Sum_probs=144.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++++|+++|++. ++++|||+||. .+|+... ..+..|+++..+. . +|+.+|..+++ .++++
T Consensus 144 ~~~~ll~aa~~~-gvkr~V~~SS~-~vyg~~~----~~p~~E~~~~~p~---------~-sK~~~E~~l~~----~~l~~ 203 (378)
T PLN00016 144 EVEPVADWAKSP-GLKQFLFCSSA-GVYKKSD----EPPHVEGDAVKPK---------A-GHLEVEAYLQK----LGVNW 203 (378)
T ss_pred HHHHHHHHHHHc-CCCEEEEEccH-hhcCCCC----CCCCCCCCcCCCc---------c-hHHHHHHHHHH----cCCCe
Confidence 578999999998 99999999997 9998754 4566777655442 2 89999988753 48999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC----CCCceeehhhhHHHHHHhhcCCCC-CceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA----FPYIFVEIRDVVYAHIRALEVPKA-SGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~~ 154 (216)
+++||+++||++.... ....++..+..+. ..++ ..++|+|++|+|+++..++.++.. +++|+++ ++.+|+.
T Consensus 204 ~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~ 281 (378)
T PLN00016 204 TSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFD 281 (378)
T ss_pred EEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHH
Confidence 9999999999986431 2234555666666 3332 346899999999999999987644 4578776 5679999
Q ss_pred HHHHHHHHhCCCCC-C---CCCCc--------cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcCCC
Q 027969 155 DILKFLREHYPTLL-R---SGKLE--------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 155 el~~~i~~~~~~~~-~---~~~~~--------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
|+++.+.+.++... + +.... ........+|.+|+ +.|||+| ++++++|+++++|+++.|.+
T Consensus 282 el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 282 GMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred HHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999986432 1 11100 01123345799999 7899999 89999999999999988865
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-24 Score=166.39 Aligned_cols=199 Identities=17% Similarity=0.180 Sum_probs=143.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 80 (216)
|+.+++++|.+. ++++||++||. .+|+... ..+++|+++..+. +.|+.+|..+|+.++.+++. .+++
T Consensus 100 ~~~~l~~~~~~~-~~~~~v~~ss~-~~~g~~~----~~~~~e~~~~~~~------~~y~~sK~~~e~~~~~~~~~~~~~~ 167 (328)
T TIGR01179 100 NTLNLLEAMQQT-GVKKFIFSSSA-AVYGEPS----SIPISEDSPLGPI------NPYGRSKLMSERILRDLSKADPGLS 167 (328)
T ss_pred HHHHHHHHHHhc-CCCEEEEecch-hhcCCCC----CCCccccCCCCCC------CchHHHHHHHHHHHHHHHHhccCCC
Confidence 678999999988 78899999997 8897654 4578888766544 45999999999999999876 6999
Q ss_pred EEEEcCCCccCCCCCCCC-------CccHHHHHHHHcCC-C---------CCC---CCCceeehhhhHHHHHHhhcCC--
Q 027969 81 LVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD-Q---------SFA---FPYIFVEIRDVVYAHIRALEVP-- 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~-~---------~~~---~~~~~i~v~D~a~~~~~~~~~~-- 138 (216)
++++||+.+||+...... ..+...+.....+. . ..+ ..++|+|++|+++++..++...
T Consensus 168 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~ 247 (328)
T TIGR01179 168 YVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLN 247 (328)
T ss_pred EEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhc
Confidence 999999999998643211 11122222222211 1 111 3467999999999999998642
Q ss_pred -CCCceEEEe-cCCCCHHHHHHHHHHhCCCCC-CCC-CCccCCCCccccchHHH-HHhCCee-ee-hhhhHHHHHHHHHH
Q 027969 139 -KASGRYLLA-GSVAQHSDILKFLREHYPTLL-RSG-KLEEKYQPTIKVSQERA-KSLGINF-TP-WEVGVRGCIESLME 211 (216)
Q Consensus 139 -~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~-~~~~~~~~~~~~d~~k~-~~lg~~~-~~-~~~~i~~~~~~~~~ 211 (216)
..++.|+++ ++++|++|+++.+++.++... +.. ...........+|++|+ +.|||+| .+ ++++++++++|+.+
T Consensus 248 ~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~ 327 (328)
T TIGR01179 248 GGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESR 327 (328)
T ss_pred CCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhc
Confidence 234578775 678999999999999986431 110 00111223456799999 7799999 65 99999999999875
Q ss_pred c
Q 027969 212 K 212 (216)
Q Consensus 212 ~ 212 (216)
+
T Consensus 328 ~ 328 (328)
T TIGR01179 328 N 328 (328)
T ss_pred C
Confidence 3
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-24 Score=158.73 Aligned_cols=200 Identities=20% Similarity=0.221 Sum_probs=154.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCC-cccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN-PVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+||++++++ +++.+|+.||+ .+||.+. ..|++|+++.. |. ++||.+|...|.++..++...++.
T Consensus 107 gtlnlLe~~~~~-~~~~~V~sssa-tvYG~p~----~ip~te~~~t~~p~------~pyg~tK~~iE~i~~d~~~~~~~~ 174 (343)
T KOG1371|consen 107 GTLNLLEVMKAH-NVKALVFSSSA-TVYGLPT----KVPITEEDPTDQPT------NPYGKTKKAIEEIIHDYNKAYGWK 174 (343)
T ss_pred hHHHHHHHHHHc-CCceEEEecce-eeecCcc----eeeccCcCCCCCCC------CcchhhhHHHHHHHHhhhccccce
Confidence 899999999999 69999999997 9999987 79999998887 44 669999999999999999988999
Q ss_pred EEEEcCCCccC--CCC----CCC--CCccHHHHHHHHcCC-C-------CCC-----CCCceeehhhhHHHHHHhhcCCC
Q 027969 81 LVAIHPGTVIG--PFF----QPI--LNFGAEVILNLINGD-Q-------SFA-----FPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 81 ~~ilR~~~v~G--~~~----~~~--~~~~~~~~~~~~~~~-~-------~~~-----~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
++.||.++++| +.. .+. .+.+...+....-+. + .+. ...+++|+-|+|+.++.++....
T Consensus 175 ~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~ 254 (343)
T KOG1371|consen 175 VTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLR 254 (343)
T ss_pred EEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccc
Confidence 99999999999 322 111 111111222222232 1 111 34569999999999999998754
Q ss_pred C---CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 140 A---SGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 140 ~---~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
. .++||.+ +...++.+|+.++++..+.. ++... ...+......+.+++ ++|||++ +.++++++++++|..
T Consensus 255 ~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~-~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~ 333 (343)
T KOG1371|consen 255 GAAEFGVYNLGTGKGSSVLELVTAFEKALGVK-IKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQK 333 (343)
T ss_pred cchheeeEeecCCCCccHHHHHHHHHHHhcCC-CCccccCCCCCCceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHh
Confidence 4 2268766 77889999999999998532 12111 245666778899999 9999999 999999999999998
Q ss_pred HcCC
Q 027969 211 EKGF 214 (216)
Q Consensus 211 ~~~~ 214 (216)
+...
T Consensus 334 ~np~ 337 (343)
T KOG1371|consen 334 QNPS 337 (343)
T ss_pred cCCC
Confidence 7653
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=165.83 Aligned_cols=188 Identities=17% Similarity=0.182 Sum_probs=130.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+|+++|.+. ++ ++||+||. .||+... ..+++|++++.|. +.||++|+++|+.+++.. -++
T Consensus 81 ~~~~la~~~~~~-~~-~li~~STd-~VFdG~~----~~~y~E~d~~~P~------~~YG~~K~~~E~~v~~~~----~~~ 143 (286)
T PF04321_consen 81 ATKNLAEACKER-GA-RLIHISTD-YVFDGDK----GGPYTEDDPPNPL------NVYGRSKLEGEQAVRAAC----PNA 143 (286)
T ss_dssp HHHHHHHHHHHC-T--EEEEEEEG-GGS-SST----SSSB-TTS----S------SHHHHHHHHHHHHHHHH-----SSE
T ss_pred HHHHHHHHHHHc-CC-cEEEeecc-EEEcCCc----ccccccCCCCCCC------CHHHHHHHHHHHHHHHhc----CCE
Confidence 678999999998 86 79999998 9997654 6789999988876 669999999999998853 489
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCC----CceEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKA----SGRYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~~~-~~~~s~ 153 (216)
+|+|++++||+... +....++..+.+++ ..+. ...+.+|++|+|+++..++++... .|+|+++ ++.+|+
T Consensus 144 ~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~ 220 (286)
T PF04321_consen 144 LILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSR 220 (286)
T ss_dssp EEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEH
T ss_pred EEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCH
Confidence 99999999999332 24445556666666 3333 666899999999999999987543 5788665 778999
Q ss_pred HHHHHHHHHhCCCCC-----CCCC---CccCCCCccccchHHH-HHhCCeeeehhhhHHHHHHHH
Q 027969 154 SDILKFLREHYPTLL-----RSGK---LEEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESL 209 (216)
Q Consensus 154 ~el~~~i~~~~~~~~-----~~~~---~~~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~ 209 (216)
.|+++.+++.++... ++.. .......+..+|++|+ +.||+++++|+++++++++.+
T Consensus 221 ~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 221 YEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp HHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 999999999985332 1111 1133445678999999 778999999999999998765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=155.07 Aligned_cols=187 Identities=20% Similarity=0.201 Sum_probs=148.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.||+++|++. +. ++||+||. .||.... ..++.|++.++|. +.||+||+++|+.++++ +.+.
T Consensus 80 ~~~~lA~aa~~~-ga-~lVhiSTD-yVFDG~~----~~~Y~E~D~~~P~------nvYG~sKl~GE~~v~~~----~~~~ 142 (281)
T COG1091 80 GAENLARAAAEV-GA-RLVHISTD-YVFDGEK----GGPYKETDTPNPL------NVYGRSKLAGEEAVRAA----GPRH 142 (281)
T ss_pred HHHHHHHHHHHh-CC-eEEEeecc-eEecCCC----CCCCCCCCCCCCh------hhhhHHHHHHHHHHHHh----CCCE
Confidence 789999999999 86 79999998 9996654 6789999999887 66999999999999877 5779
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDIL 157 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~ 157 (216)
+|+|.++|||.... |+...+++...+|+ ..+. +..+.+++.|+|+++..++.....+++|+++ .+..||.|++
T Consensus 143 ~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa 219 (281)
T COG1091 143 LILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFA 219 (281)
T ss_pred EEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHH
Confidence 99999999998752 34556666676776 3334 5667999999999999999988878888776 4567999999
Q ss_pred HHHHHhCCCCC-CC--CCCc-----cCCCCccccchHHH-HHhCCeeeehhhhHHHHHHH
Q 027969 158 KFLREHYPTLL-RS--GKLE-----EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIES 208 (216)
Q Consensus 158 ~~i~~~~~~~~-~~--~~~~-----~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~ 208 (216)
+.|.+.++... +. .... ........+|+.|+ +.+|+.+++|+++++.+++.
T Consensus 220 ~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~ 279 (281)
T COG1091 220 KAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDE 279 (281)
T ss_pred HHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence 99999985221 11 1111 23333457999999 78899999999999998764
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=147.66 Aligned_cols=201 Identities=20% Similarity=0.199 Sum_probs=154.6
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 83 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 83 (216)
-|+|..|-++ ++++++++.|+ ++|+... .-|++|....+.+..++ ..+|+..|.++.-.-+.|..++|..++.
T Consensus 88 dNVlhsa~e~-gv~K~vsclSt-CIfPdkt----~yPIdEtmvh~gpphps-N~gYsyAKr~idv~n~aY~~qhg~~~ts 160 (315)
T KOG1431|consen 88 DNVLHSAHEH-GVKKVVSCLST-CIFPDKT----SYPIDETMVHNGPPHPS-NFGYSYAKRMIDVQNQAYRQQHGRDYTS 160 (315)
T ss_pred hhHHHHHHHh-chhhhhhhcce-eecCCCC----CCCCCHHHhccCCCCCC-chHHHHHHHHHHHHHHHHHHHhCCceee
Confidence 4788899999 99999999997 9998766 68999986665432221 1349999999988889999999999999
Q ss_pred EcCCCccCCCCCCCC---CccHHHHHHHHcCC-------CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 84 IHPGTVIGPFFQPIL---NFGAEVILNLINGD-------QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 84 lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
+-|.++|||.++.+. ..++.+++++...+ ..++ ..+.|+|++|+|+++++++.+...-. +.+.+++
T Consensus 161 viPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge 240 (315)
T KOG1431|consen 161 VIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGE 240 (315)
T ss_pred eccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCc
Confidence 999999999986432 24467777765433 2333 34579999999999999998765544 4444566
Q ss_pred --CCCHHHHHHHHHHhCC---CCCCCCCCccCCCCccccchHHHHHhCCee--eehhhhHHHHHHHHHHc
Q 027969 150 --VAQHSDILKFLREHYP---TLLRSGKLEEKYQPTIKVSQERAKSLGINF--TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 150 --~~s~~el~~~i~~~~~---~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~--~~~~~~i~~~~~~~~~~ 212 (216)
.+|++|+++++.+.++ +..+.... ........+|++|++.|+|.| .+++++|.++++|+.++
T Consensus 241 ~~EVtI~e~aeaV~ea~~F~G~l~~DttK-~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 241 SDEVTIREAAEAVVEAVDFTGKLVWDTTK-SDGQFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred cceeEHHHHHHHHHHHhCCCceEEeeccC-CCCCcccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence 7999999999999973 22222211 233445689999999999988 77999999999999864
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=157.11 Aligned_cols=157 Identities=26% Similarity=0.322 Sum_probs=113.2
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---Hc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---EN 77 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~ 77 (216)
.||+||+++|+++ ++++|||+||. ++++......+-...+|+.+..+ .+.++|+.||.++|++++++.. +.
T Consensus 94 ~GT~nvl~aa~~~-~VkrlVytSS~-~vv~~~~~~~~~~~~dE~~~~~~----~~~~~Y~~SK~~AE~~V~~a~~~~~~~ 167 (280)
T PF01073_consen 94 DGTRNVLEAARKA-GVKRLVYTSSI-SVVFDNYKGDPIINGDEDTPYPS----SPLDPYAESKALAEKAVLEANGSELKN 167 (280)
T ss_pred HHHHHHHHHHHHc-CCCEEEEEcCc-ceeEeccCCCCcccCCcCCcccc----cccCchHHHHHHHHHHHHhhccccccc
Confidence 4899999999999 99999999998 66655221111112245443322 2446799999999999999876 22
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcC-------CCCCc-
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEV-------PKASG- 142 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~-------~~~~~- 142 (216)
.+..++|||+.||||++.. ....+......|. ..++ ..++++|++|+|.+++++++. ....|
T Consensus 168 g~~l~t~~lRP~~IyGp~d~~---~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~ 244 (280)
T PF01073_consen 168 GGRLRTCALRPAGIYGPGDQR---LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQ 244 (280)
T ss_pred ccceeEEEEeccEEeCccccc---ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCc
Confidence 5999999999999999764 2334444455553 2233 457899999999999998752 22344
Q ss_pred eEEEe-cCCCC-HHHHHHHHHHhCCC
Q 027969 143 RYLLA-GSVAQ-HSDILKFLREHYPT 166 (216)
Q Consensus 143 ~~~~~-~~~~s-~~el~~~i~~~~~~ 166 (216)
.|+++ ++++. +.|+++.+.+.+|.
T Consensus 245 ~y~itd~~p~~~~~~f~~~~~~~~G~ 270 (280)
T PF01073_consen 245 AYFITDGEPVPSFWDFMRPLWEALGY 270 (280)
T ss_pred EEEEECCCccCcHHHHHHHHHHHCCC
Confidence 77776 77888 99999999999854
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=155.03 Aligned_cols=201 Identities=23% Similarity=0.297 Sum_probs=145.1
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
+||.|++++|.+. +++++||+||. .|..... .....+++.+.|. ...++|+.||..+|+++++++....+.
T Consensus 104 ~gT~nvi~~c~~~-~v~~lIYtSs~-~Vvf~g~----~~~n~~E~~p~p~---~~~d~Y~~sKa~aE~~Vl~an~~~~l~ 174 (361)
T KOG1430|consen 104 NGTLNVIEACKEL-GVKRLIYTSSA-YVVFGGE----PIINGDESLPYPL---KHIDPYGESKALAEKLVLEANGSDDLY 174 (361)
T ss_pred hhHHHHHHHHHHh-CCCEEEEecCc-eEEeCCe----ecccCCCCCCCcc---ccccccchHHHHHHHHHHHhcCCCCee
Confidence 4899999999999 99999999998 5554443 2233333333331 233469999999999999998666799
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-----CCCceeehhhhHHHHHHhhc-----CCCCCc-eEEEe-c
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-----FPYIFVEIRDVVYAHIRALE-----VPKASG-RYLLA-G 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~v~D~a~~~~~~~~-----~~~~~~-~~~~~-~ 148 (216)
.++|||+.||||++.. ..+.++..+..|...+. ...+|++++.++.+++.+.. .+...| .|+++ +
T Consensus 175 T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~ 251 (361)
T KOG1430|consen 175 TCALRPPGIYGPGDKR---LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD 251 (361)
T ss_pred EEEEccccccCCCCcc---ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC
Confidence 9999999999999864 45566666666762222 45679999999999988763 233445 56555 7
Q ss_pred CCCCHHHHHHHHHHhCCCC-----CCCCCCc--------------------------cCCCCccccchHHH-HHhCCee-
Q 027969 149 SVAQHSDILKFLREHYPTL-----LRSGKLE--------------------------EKYQPTIKVSQERA-KSLGINF- 195 (216)
Q Consensus 149 ~~~s~~el~~~i~~~~~~~-----~~~~~~~--------------------------~~~~~~~~~d~~k~-~~lg~~~- 195 (216)
.++...+++..+.+.++.. .+|.... ........+|..|+ +.|||+|
T Consensus 252 ~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~ 331 (361)
T KOG1430|consen 252 TPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPL 331 (361)
T ss_pred CcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCc
Confidence 7777777777888887422 1222111 12223567899999 8899999
Q ss_pred eehhhhHHHHHHHHHHcC
Q 027969 196 TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~ 213 (216)
.++++++.+++.|.....
T Consensus 332 ~~~~e~~~~~~~~~~~~~ 349 (361)
T KOG1430|consen 332 VSLEEAIQRTIHWVASES 349 (361)
T ss_pred CCHHHHHHHHHHHHhhhh
Confidence 999999999999876543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-22 Score=148.23 Aligned_cols=134 Identities=29% Similarity=0.395 Sum_probs=112.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++++++++|.+. ++++||++||. .+|+... ..+++|+++..+. ++|+.+|..+|++++.+.+.+++++
T Consensus 95 ~~~~ll~~~~~~-~~~~~i~~sS~-~~y~~~~----~~~~~e~~~~~~~------~~Y~~~K~~~e~~~~~~~~~~~~~~ 162 (236)
T PF01370_consen 95 GTRNLLEAAREA-GVKRFIFLSSA-SVYGDPD----GEPIDEDSPINPL------SPYGASKRAAEELLRDYAKKYGLRV 162 (236)
T ss_dssp HHHHHHHHHHHH-TTSEEEEEEEG-GGGTSSS----SSSBETTSGCCHS------SHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred cccccccccccc-ccccccccccc-ccccccc----ccccccccccccc------ccccccccccccccccccccccccc
Confidence 689999999999 77999999996 9999875 6788999877555 5599999999999999998889999
Q ss_pred EEEcCCCccCCC--CCCCCCccHHHHHHHHcCC-CCC-C---CCCceeehhhhHHHHHHhhcCCC-CCceEEEe
Q 027969 82 VAIHPGTVIGPF--FQPILNFGAEVILNLINGD-QSF-A---FPYIFVEIRDVVYAHIRALEVPK-ASGRYLLA 147 (216)
Q Consensus 82 ~ilR~~~v~G~~--~~~~~~~~~~~~~~~~~~~-~~~-~---~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~ 147 (216)
+++||+.|||+. ..........++..+.+|+ ..+ + ..++|+|++|+|+++..+++++. .+++||++
T Consensus 163 ~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 163 TILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 999999999999 1122235567888888888 322 3 56789999999999999999888 56688863
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.4e-21 Score=146.79 Aligned_cols=184 Identities=18% Similarity=0.129 Sum_probs=127.5
Q ss_pred cHHHHHHHHhccCCcc--EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIK--RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~--~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||++|+++|++. +++ +||++||. .+|+... ..+++|+++..+. +.|+..+...|..+..+ ++.++
T Consensus 89 ~~~~l~~a~~~~-~~~~~~~i~~S~~-~~yg~~~----~~~~~E~~~~~~~------~~~~~~~~~~e~~~~~~-~~~~~ 155 (292)
T TIGR01777 89 TTRALVEAIAAA-EQKPKVFISASAV-GYYGTSE----DRVFTEEDSPAGD------DFLAELCRDWEEAAQAA-EDLGT 155 (292)
T ss_pred HHHHHHHHHHhc-CCCceEEEEeeeE-EEeCCCC----CCCcCcccCCCCC------ChHHHHHHHHHHHhhhc-hhcCC
Confidence 689999999998 653 56667775 7888654 5678888743332 33677777777776654 34589
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++++||++|||+... ....++....... ..++ ..++|+|++|+|+++..+++++...+.|+++ ++++|++
T Consensus 156 ~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~ 231 (292)
T TIGR01777 156 RVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNK 231 (292)
T ss_pred ceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHH
Confidence 9999999999999642 2222222221111 1233 5679999999999999999886666788766 6889999
Q ss_pred HHHHHHHHhCCCC---CCCCCCc--------cCCCCccccchHHHHHhCCee-e-ehhhhH
Q 027969 155 DILKFLREHYPTL---LRSGKLE--------EKYQPTIKVSQERAKSLGINF-T-PWEVGV 202 (216)
Q Consensus 155 el~~~i~~~~~~~---~~~~~~~--------~~~~~~~~~d~~k~~~lg~~~-~-~~~~~i 202 (216)
|+++.+++.++.. .+|.+.. .....+..++++|++.+||+| + +++|++
T Consensus 232 di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 232 EFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 9999999998642 2332221 111235567889998899999 5 688763
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-21 Score=148.72 Aligned_cols=172 Identities=13% Similarity=0.134 Sum_probs=126.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---ENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~ 78 (216)
|+.+++++|.+. ++++||++||. ..+ .| .++|+.||..+|+++..++. ..|
T Consensus 104 g~~~ll~aa~~~-~~~~iV~~SS~-~~~------------------~p------~~~Y~~sK~~~E~l~~~~~~~~~~~g 157 (324)
T TIGR03589 104 GAQNVIDAAIDN-GVKRVVALSTD-KAA------------------NP------INLYGATKLASDKLFVAANNISGSKG 157 (324)
T ss_pred HHHHHHHHHHHc-CCCEEEEEeCC-CCC------------------CC------CCHHHHHHHHHHHHHHHHHhhccccC
Confidence 789999999998 88899999996 211 11 13499999999999987543 458
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCC---C--CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCH
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF---A--FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQH 153 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~ 153 (216)
++++++||++|||++. ..+..+...+..+...+ . ..++|+|++|+|++++.+++....+.+|++++..+++
T Consensus 158 i~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv 233 (324)
T TIGR03589 158 TRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFVPKIPSMKI 233 (324)
T ss_pred cEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEccCCCcEEH
Confidence 9999999999999863 23444555555554222 2 4457999999999999999865434477766777999
Q ss_pred HHHHHHHHHhCCCCCCCCCCccCC-CCccccchHHH-HHhCCee-eehhhhHHHH
Q 027969 154 SDILKFLREHYPTLLRSGKLEEKY-QPTIKVSQERA-KSLGINF-TPWEVGVRGC 205 (216)
Q Consensus 154 ~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~ 205 (216)
.|+++.+.+..+....+.. ..+ .....+|.+|+ +.|||+| +++++++.+.
T Consensus 234 ~el~~~i~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 234 TDLAEAMAPECPHKIVGIR--PGEKLHEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred HHHHHHHHhhCCeeEeCCC--CCchhHhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 9999999997643322222 112 13356899999 8899999 9999998643
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.6e-20 Score=149.06 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=115.6
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCC-CC-----Cc-------------------------
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW-FS-----NP------------------------- 49 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~-~~-----~~------------------------- 49 (216)
.||.+|+++|++++++++|||+||. .|||......++.++++.. +. ++
T Consensus 138 ~gt~~ll~~a~~~~~~k~~V~vST~-~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (491)
T PLN02996 138 LGALNVLNFAKKCVKVKMLLHVSTA-YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEIT 216 (491)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEeee-EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHH
Confidence 3799999999986578999999997 9998743111122222111 00 00
Q ss_pred ----------ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCccCCCCCCCCCcc------HHHHHHHHcCC-
Q 027969 50 ----------VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG------AEVILNLINGD- 112 (216)
Q Consensus 50 ----------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~- 112 (216)
.....+++.|+.||.++|+++..+.. +++++++||++|||+...+..+.. ..++..+.+|.
T Consensus 217 ~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~ 294 (491)
T PLN02996 217 QAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKL 294 (491)
T ss_pred HHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceE
Confidence 00122446799999999999988753 899999999999999876632221 23444455565
Q ss_pred C-CCC---CCCceeehhhhHHHHHHhhcCC--C--CCceEEEe-c--CCCCHHHHHHHHHHhCCCCCC
Q 027969 113 Q-SFA---FPYIFVEIRDVVYAHIRALEVP--K--ASGRYLLA-G--SVAQHSDILKFLREHYPTLLR 169 (216)
Q Consensus 113 ~-~~~---~~~~~i~v~D~a~~~~~~~~~~--~--~~~~~~~~-~--~~~s~~el~~~i~~~~~~~~~ 169 (216)
. .++ ...||+||||+|.+++.++... . .+.+||++ + .++|+.|+++.+.+.++..+.
T Consensus 295 ~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 295 TCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred eEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 3 333 4678999999999999998752 1 23378776 5 689999999999998865554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-19 Score=151.33 Aligned_cols=199 Identities=16% Similarity=0.061 Sum_probs=138.9
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||.+++++|.+. ++++|||+||. .+||... .+++|+++..+. .+.+.|+.||+++|+++++. .+++
T Consensus 103 ~gt~~ll~~a~~~-~~~~~v~~SS~-~v~g~~~-----~~~~e~~~~~~~---~~~~~Y~~sK~~~E~~~~~~---~g~~ 169 (657)
T PRK07201 103 DGTRNVVELAERL-QAATFHHVSSI-AVAGDYE-----GVFREDDFDEGQ---GLPTPYHRTKFEAEKLVREE---CGLP 169 (657)
T ss_pred HHHHHHHHHHHhc-CCCeEEEEecc-ccccCcc-----Cccccccchhhc---CCCCchHHHHHHHHHHHHHc---CCCc
Confidence 3789999999998 78999999997 8997643 345666433222 12245999999999998753 4899
Q ss_pred EEEEcCCCccCCCCCCCCC---c---cHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe
Q 027969 81 LVAIHPGTVIGPFFQPILN---F---GAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~---~---~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~ 147 (216)
++++||++|||+....... . ...++..+.... +.+. +..+++|++|+++++..++..+...+ +|+++
T Consensus 170 ~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~ 249 (657)
T PRK07201 170 WRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLT 249 (657)
T ss_pred EEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeC
Confidence 9999999999987543211 1 112233331111 1112 45689999999999999987654444 78776
Q ss_pred -cCCCCHHHHHHHHHHhCCCCC-------CCCCCc----------------------------cCCCCccccchHHH-HH
Q 027969 148 -GSVAQHSDILKFLREHYPTLL-------RSGKLE----------------------------EKYQPTIKVSQERA-KS 190 (216)
Q Consensus 148 -~~~~s~~el~~~i~~~~~~~~-------~~~~~~----------------------------~~~~~~~~~d~~k~-~~ 190 (216)
++++++.|+++.+.+.++... +|.... ........+|++++ +.
T Consensus 250 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~ 329 (657)
T PRK07201 250 DPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAA 329 (657)
T ss_pred CCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHH
Confidence 688999999999999985432 222110 11223457889999 77
Q ss_pred h---CCeeeehhhhHHHHHHHHHHc
Q 027969 191 L---GINFTPWEVGVRGCIESLMEK 212 (216)
Q Consensus 191 l---g~~~~~~~~~i~~~~~~~~~~ 212 (216)
| |+.+..+.+.+...++|+.+.
T Consensus 330 L~~~~~~~p~~~~~~~~~~~~~~~~ 354 (657)
T PRK07201 330 LKGSGIEVPRLASYAPRLWDYWERH 354 (657)
T ss_pred hccCCcCCCChHHHHHHHHHHHHhc
Confidence 7 677788889999999887664
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=148.73 Aligned_cols=162 Identities=19% Similarity=0.123 Sum_probs=118.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|++. ++++|||+||. . |..+|+++.. +++++
T Consensus 82 GT~nLLeAa~~~-gvkr~V~iSS~-~-----------------------------------K~aaE~ll~~----~gl~~ 120 (854)
T PRK05865 82 GTANVLKAMAET-GTGRIVFTSSG-H-----------------------------------QPRVEQMLAD----CGLEW 120 (854)
T ss_pred HHHHHHHHHHHc-CCCeEEEECCc-H-----------------------------------HHHHHHHHHH----cCCCE
Confidence 789999999998 88999999996 1 6778887743 48999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-----CCCceeehhhhHHHHHHhhcCCC-CCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-----FPYIFVEIRDVVYAHIRALEVPK-ASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~-~~~~s~~ 154 (216)
+++||++|||++.. .++..+... +.++ ..++|+|++|+|+++..+++.+. .++.||++ ++.+|++
T Consensus 121 vILRp~~VYGP~~~-------~~i~~ll~~-~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~ 192 (854)
T PRK05865 121 VAVRCALIFGRNVD-------NWVQRLFAL-PVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFR 192 (854)
T ss_pred EEEEeceEeCCChH-------HHHHHHhcC-ceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHH
Confidence 99999999998721 233333222 2222 24589999999999999986543 35578665 7789999
Q ss_pred HHHHHHHHhCCCCC--CCCCCc-----cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLL--RSGKLE-----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~--~~~~~~-----~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+++.+.+...... ...... ........+|++|+ +.|||+| ++++++|+++++|++.+
T Consensus 193 EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 193 RIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred HHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 99999987531111 010000 11122446899999 7899999 99999999999999864
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=125.38 Aligned_cols=201 Identities=15% Similarity=0.045 Sum_probs=155.9
Q ss_pred CcHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 1 MGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
.||.+|||+.+-.+. -.||.+.||+ ..||..+ ..|.+|.+|..|. |||+.+|+-+-.+...|...+|+
T Consensus 107 iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~----~~pq~E~TPFyPr------SPYAvAKlYa~W~tvNYResYgl 175 (345)
T COG1089 107 IGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQ----EIPQKETTPFYPR------SPYAVAKLYAYWITVNYRESYGL 175 (345)
T ss_pred hHHHHHHHHHHHhCCcccEEEecccH-HhhcCcc----cCccccCCCCCCC------CHHHHHHHHHHheeeehHhhcCc
Confidence 489999999998622 2489999996 9999887 7899999988887 67999999999999999999999
Q ss_pred cEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCC
Q 027969 80 DLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVA 151 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~ 151 (216)
-.|.-+.++--+|.....+ .-+...+.++..|. ..++ ..+||-|+.|-++++-+.++.+.+....+.+|...
T Consensus 176 ~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~PddyViATg~t~ 255 (345)
T COG1089 176 FACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEPDDYVIATGETH 255 (345)
T ss_pred eeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCCCceEEecCcee
Confidence 9999999999888765432 11234444555666 2333 67889999999999999998877444457779999
Q ss_pred CHHHHHHHHHHhCCCC-CC---------------------CCCCc-cCCCCccccchHHH-HHhCCee-eehhhhHHHHH
Q 027969 152 QHSDILKFLREHYPTL-LR---------------------SGKLE-EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 152 s~~el~~~i~~~~~~~-~~---------------------~~~~~-~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~ 206 (216)
|++|++++..+..+.. .+ ..... +....-..-|.+|+ +.|||+| .++++.+++++
T Consensus 256 sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv 335 (345)
T COG1089 256 SVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMV 335 (345)
T ss_pred eHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHH
Confidence 9999999999988521 10 01111 22333457789999 7899999 99999999999
Q ss_pred HHHHHc
Q 027969 207 ESLMEK 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
++-.+.
T Consensus 336 ~~dl~~ 341 (345)
T COG1089 336 EADLEA 341 (345)
T ss_pred HHHHHH
Confidence 876543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=128.13 Aligned_cols=192 Identities=13% Similarity=0.145 Sum_probs=133.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCC--CCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMT--PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|++. +++ ++++||. ++|+.....+ ...+++|++++.+. .++|+.||+++|+++..+.
T Consensus 90 gt~~ll~aa~~~-gv~-~v~~sS~-~vy~~~~~~p~~~~~~~~Ee~~p~~~-----~s~Yg~sK~~~E~~~~~y~----- 156 (298)
T PLN02778 90 GTLTLADVCRER-GLV-LTNYATG-CIFEYDDAHPLGSGIGFKEEDTPNFT-----GSFYSKTKAMVEELLKNYE----- 156 (298)
T ss_pred HHHHHHHHHHHh-CCC-EEEEecc-eEeCCCCCCCcccCCCCCcCCCCCCC-----CCchHHHHHHHHHHHHHhh-----
Confidence 789999999998 886 5666775 7876432100 12357777654322 2569999999999998875
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDILK 158 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~ 158 (216)
+..++|+..++|++.. ....++..+..+...+....+|+|++|+++++..++.... .|.||++ ++.+|+.|+++
T Consensus 157 ~~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~ 231 (298)
T PLN02778 157 NVCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILE 231 (298)
T ss_pred ccEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHH
Confidence 3568898888886532 2234677777776322222479999999999999997654 4688765 78899999999
Q ss_pred HHHHhCCCC----CCCCCCc----cCCCCccccchHHH-HHhCCeeeehhhhHHHHHHHHHH
Q 027969 159 FLREHYPTL----LRSGKLE----EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLME 211 (216)
Q Consensus 159 ~i~~~~~~~----~~~~~~~----~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~~ 211 (216)
.+++.++.. .+..... ........+|++|+ +.++=.+...+++++..++-++.
T Consensus 232 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (298)
T PLN02778 232 MYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNKK 293 (298)
T ss_pred HHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHHHh
Confidence 999998642 1111100 11122347999999 66776667888899888887754
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-17 Score=129.78 Aligned_cols=204 Identities=18% Similarity=0.152 Sum_probs=132.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|.+. ++++|||+||. ++|+... ..+..|++...+. ...+.+.|+.||+.+|.+++.+.+. |+++
T Consensus 115 g~~~ll~~a~~~-~~~~~v~iSS~-~v~~~~~----~~~~~~~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~ 186 (367)
T TIGR01746 115 GTREVLRLAASG-RAKPLHYVSTI-SVLAAID----LSTVTEDDAIVTP-PPGLAGGYAQSKWVAELLVREASDR-GLPV 186 (367)
T ss_pred HHHHHHHHHhhC-CCceEEEEccc-cccCCcC----CCCcccccccccc-ccccCCChHHHHHHHHHHHHHHHhc-CCCE
Confidence 689999999988 77889999998 8887643 2223444332211 1112345999999999999887665 9999
Q ss_pred EEEcCCCccCCCCCCCCC---ccHHHHHHHHcCCCCCC----CCCceeehhhhHHHHHHhhcCCCC---CceEEEe-cCC
Q 027969 82 VAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFA----FPYIFVEIRDVVYAHIRALEVPKA---SGRYLLA-GSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~ 150 (216)
+++||+.|+|+......+ ....++...... ..++ ...+++|++|+++++..++..+.. ++.|+++ +++
T Consensus 187 ~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~ 265 (367)
T TIGR01746 187 TIVRPGRILGNSYTGAINSSDILWRMVKGCLAL-GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP 265 (367)
T ss_pred EEECCCceeecCCCCCCCchhHHHHHHHHHHHh-CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence 999999999985433221 112222222222 2233 356799999999999999876654 4578766 688
Q ss_pred CCHHHHHHHHHHhCCCC--CCC--CCCc---------------------cCC--------CCccccchHHH-H---HhCC
Q 027969 151 AQHSDILKFLREHYPTL--LRS--GKLE---------------------EKY--------QPTIKVSQERA-K---SLGI 193 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~--~~~--~~~~---------------------~~~--------~~~~~~d~~k~-~---~lg~ 193 (216)
+++.|+++.+.+ .+.. .++ .+.. ... .....+++.+. + .+|.
T Consensus 266 ~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (367)
T TIGR01746 266 VSLDEFLEWLER-AGYNLKLVSFDEWLQRLEDSDTAKRDPPRYPLLPLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGI 344 (367)
T ss_pred CCHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhhhcCCCcccccchhhhhccCCCcccccccccccchHHHHHHHhcCCC
Confidence 999999999988 4211 111 0000 000 00124555555 3 3465
Q ss_pred ee-eehhhhHHHHHHHHHHcCCC
Q 027969 194 NF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 194 ~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
.+ .--.+.++.+++++.+.++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ 367 (367)
T TIGR01746 345 REPSITAPLLHLYLQYLKEIGFL 367 (367)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCC
Confidence 55 34457889999999998875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-17 Score=127.17 Aligned_cols=173 Identities=14% Similarity=0.159 Sum_probs=118.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|+++ ++++|||+||. ..... +. ++|..+|..+|+.++. .++++
T Consensus 89 ~~~~l~~aa~~~-gvkr~I~~Ss~-~~~~~-----------------~~------~~~~~~K~~~e~~l~~----~~l~~ 139 (317)
T CHL00194 89 GKLALIEAAKAA-KIKRFIFFSIL-NAEQY-----------------PY------IPLMKLKSDIEQKLKK----SGIPY 139 (317)
T ss_pred HHHHHHHHHHHc-CCCEEEEeccc-ccccc-----------------CC------ChHHHHHHHHHHHHHH----cCCCe
Confidence 678999999999 99999999996 32210 00 2389999999988743 48999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCC-CCC---CCCceeehhhhHHHHHHhhcCCCCC-ceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQ-SFA---FPYIFVEIRDVVYAHIRALEVPKAS-GRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~-~~~~s~~e 155 (216)
+++||+.+|+.-.. .+...+..+.+ .+. ..++|+|++|+|+++..+++.+... ++|+++ ++.+|++|
T Consensus 140 tilRp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~e 212 (317)
T CHL00194 140 TIFRLAGFFQGLIS-------QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSE 212 (317)
T ss_pred EEEeecHHhhhhhh-------hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHH
Confidence 99999988863211 11122223332 222 5678999999999999999875444 478776 67899999
Q ss_pred HHHHHHHhCCCC----CCCCCCc-------------------------cCCCCccccchHHH-HHhCCee---eehhhhH
Q 027969 156 ILKFLREHYPTL----LRSGKLE-------------------------EKYQPTIKVSQERA-KSLGINF---TPWEVGV 202 (216)
Q Consensus 156 l~~~i~~~~~~~----~~~~~~~-------------------------~~~~~~~~~d~~k~-~~lg~~~---~~~~~~i 202 (216)
+++.+.+.++.. .+|.+.. .........+.+++ +.||+.| .++++++
T Consensus 213 l~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 292 (317)
T CHL00194 213 IISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYF 292 (317)
T ss_pred HHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHH
Confidence 999999988642 1222111 11112233466777 7899987 6888888
Q ss_pred HHHHHHHH
Q 027969 203 RGCIESLM 210 (216)
Q Consensus 203 ~~~~~~~~ 210 (216)
++.+....
T Consensus 293 ~~~~~~~~ 300 (317)
T CHL00194 293 QEYFERIL 300 (317)
T ss_pred HHHHHHHH
Confidence 87776543
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.8e-17 Score=117.88 Aligned_cols=189 Identities=15% Similarity=0.122 Sum_probs=134.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.|+.|.++..+. .+.+.+|..|.+ .+||... +..++|+++.... +-+.--..-|.....+. ..|.+
T Consensus 88 ~T~~L~e~I~~~~~~P~~~isaSAv-GyYG~~~----~~~~tE~~~~g~~-------Fla~lc~~WE~~a~~a~-~~gtR 154 (297)
T COG1090 88 TTEKLVELIAASETKPKVLISASAV-GYYGHSG----DRVVTEESPPGDD-------FLAQLCQDWEEEALQAQ-QLGTR 154 (297)
T ss_pred HHHHHHHHHHhccCCCcEEEecceE-EEecCCC----ceeeecCCCCCCC-------hHHHHHHHHHHHHhhhh-hcCce
Confidence 588899988753 266778888887 9999987 8999999655443 34555555566655543 33899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
++.+|.++|.|+... .+..++.-...|- ..++ +.++|||++|++++|.+++++....|.||++ +.+++.++
T Consensus 155 vvllRtGvVLs~~GG----aL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~ 230 (297)
T COG1090 155 VVLLRTGVVLSPDGG----ALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230 (297)
T ss_pred EEEEEEEEEecCCCc----chhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHH
Confidence 999999999997743 4445554444444 4455 5567999999999999999998889988766 89999999
Q ss_pred HHHHHHHhCCCC---CCCCCCc---cCCCCccccc-----hHHHHHhCCee--eehhhhHHHHHH
Q 027969 156 ILKFLREHYPTL---LRSGKLE---EKYQPTIKVS-----QERAKSLGINF--TPWEVGVRGCIE 207 (216)
Q Consensus 156 l~~~i~~~~~~~---~~~~~~~---~~~~~~~~~d-----~~k~~~lg~~~--~~~~~~i~~~~~ 207 (216)
+...+.+.+.+. .+|.... ........++ ..|+...||++ .++++++.+.+.
T Consensus 231 F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 231 FAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred HHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 999999998422 2333221 1222222333 45555568877 999999999874
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.1e-15 Score=127.36 Aligned_cols=186 Identities=11% Similarity=0.150 Sum_probs=126.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCC--CCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP--MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~--~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|++. +++ +|++||. .||+.... .....+++|++++.+. .+.|+.||+++|++++.+.
T Consensus 461 gt~~l~~a~~~~-g~~-~v~~Ss~-~v~~~~~~~~~~~~~p~~E~~~~~~~-----~~~Yg~sK~~~E~~~~~~~----- 527 (668)
T PLN02260 461 GTLTLADVCREN-GLL-MMNFATG-CIFEYDAKHPEGSGIGFKEEDKPNFT-----GSFYSKTKAMVEELLREYD----- 527 (668)
T ss_pred HHHHHHHHHHHc-CCe-EEEEccc-ceecCCcccccccCCCCCcCCCCCCC-----CChhhHHHHHHHHHHHhhh-----
Confidence 799999999998 885 6778886 88764210 0013478888654432 2569999999999998874
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDILK 158 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~ 158 (216)
++.++|+.++||.+... ...++..+.+....+.-..+..+++|++.++..+++. ..+|+|+++ ++.+|+.|+++
T Consensus 528 ~~~~~r~~~~~~~~~~~----~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~ 602 (668)
T PLN02260 528 NVCTLRVRMPISSDLSN----PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILE 602 (668)
T ss_pred hheEEEEEEecccCCCC----ccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHH
Confidence 35778888888754321 2245555555542222123467789999998888864 335788776 67799999999
Q ss_pred HHHHhCC-CC---CCCCCC-----ccCCCCccccchHHH-HHhCCeeeehhhhHHHHHH
Q 027969 159 FLREHYP-TL---LRSGKL-----EEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIE 207 (216)
Q Consensus 159 ~i~~~~~-~~---~~~~~~-----~~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~ 207 (216)
.+.+.++ .. .+.... ..+.... .+|++|+ +.+|+ +.+|++++++++.
T Consensus 603 ~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~~~~~~l~~~~~ 659 (668)
T PLN02260 603 MYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LLSIKESLIKYVF 659 (668)
T ss_pred HHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-ccchHHHHHHHHh
Confidence 9999763 21 111110 0122333 8999999 66899 8999999998875
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.2e-15 Score=133.60 Aligned_cols=157 Identities=22% Similarity=0.176 Sum_probs=110.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCC--------CCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM--------TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~--------~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
||.+++++|.+. ++++|+|+||. ++|+..... .....+.|+.+..+. .....+.|+.||+.+|+++..+
T Consensus 1088 gt~~ll~~a~~~-~~~~~v~vSS~-~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443 1088 GTINVLNLCAEG-KAKQFSFVSST-SALDTEYYVNLSDELVQAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred HHHHHHHHHHhC-CCceEEEEeCe-eecCcccccchhhhhhhccCCCCCcccccccc-cccCCCChHHHHHHHHHHHHHH
Confidence 799999999988 88899999998 888642100 001234444332221 1122345999999999999988
Q ss_pred HHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCCC--C-ceE
Q 027969 74 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKA--S-GRY 144 (216)
Q Consensus 74 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~--~-~~~ 144 (216)
.+. |++++++||+.|||+...... ....++..+.++. ..++ +..+|+|++|++++++.++..+.. . .+|
T Consensus 1165 ~~~-g~~~~i~Rpg~v~G~~~~g~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~ 1242 (1389)
T TIGR03443 1165 GKR-GLRGCIVRPGYVTGDSKTGAT-NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVA 1242 (1389)
T ss_pred HhC-CCCEEEECCCccccCCCcCCC-CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEE
Confidence 664 999999999999999765432 2334444444433 2333 567899999999999999876532 2 267
Q ss_pred EEe-cCCCCHHHHHHHHHHh
Q 027969 145 LLA-GSVAQHSDILKFLREH 163 (216)
Q Consensus 145 ~~~-~~~~s~~el~~~i~~~ 163 (216)
+++ +..+++.++++.+.+.
T Consensus 1243 ~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1243 HVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred EeCCCCCCcHHHHHHHHHHh
Confidence 766 5678999999999765
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-15 Score=118.27 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=113.5
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
.||+|++++|.++ ++++||.+||..+|++. |.||.||+.+|+.+..+++..
T Consensus 354 ~GT~nv~~aa~~~-~V~~~V~iSTDKAV~Pt-------------------------NvmGaTKr~aE~~~~a~~~~~~~~ 407 (588)
T COG1086 354 LGTENVAEAAIKN-GVKKFVLISTDKAVNPT-------------------------NVMGATKRLAEKLFQAANRNVSGT 407 (588)
T ss_pred HhHHHHHHHHHHh-CCCEEEEEecCcccCCc-------------------------hHhhHHHHHHHHHHHHHhhccCCC
Confidence 3899999999999 99999999999666633 459999999999999998743
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQ 152 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s 152 (216)
+..++++|+|||.|... ...+.|.+.+.+|. ..+. -.+-|..++|+++.++.+......+.+|+.. |+++.
T Consensus 408 ~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvk 483 (588)
T COG1086 408 GTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVK 483 (588)
T ss_pred CcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeE
Confidence 38999999999999763 25567777788887 3333 3445999999999999999987767799887 89999
Q ss_pred HHHHHHHHHHhCC
Q 027969 153 HSDILKFLREHYP 165 (216)
Q Consensus 153 ~~el~~~i~~~~~ 165 (216)
+.|+++.+.+..|
T Consensus 484 I~dLAk~mi~l~g 496 (588)
T COG1086 484 IIDLAKAMIELAG 496 (588)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999885
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.1e-16 Score=116.73 Aligned_cols=134 Identities=19% Similarity=0.226 Sum_probs=103.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---C
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---G 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~ 78 (216)
||+|++++|.++ ++++||++||..++- |.|.||.||+.+|+++..++... +
T Consensus 107 GT~nv~~aa~~~-~v~~~v~ISTDKAv~-------------------------PtnvmGatKrlaE~l~~~~~~~~~~~~ 160 (293)
T PF02719_consen 107 GTQNVAEAAIEH-GVERFVFISTDKAVN-------------------------PTNVMGATKRLAEKLVQAANQYSGNSD 160 (293)
T ss_dssp HHHHHHHHHHHT-T-SEEEEEEECGCSS---------------------------SHHHHHHHHHHHHHHHHCCTSSSS-
T ss_pred HHHHHHHHHHHc-CCCEEEEccccccCC-------------------------CCcHHHHHHHHHHHHHHHHhhhCCCCC
Confidence 899999999999 999999999983332 11559999999999999998765 6
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCC-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCH
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQH 153 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~ 153 (216)
..++++|+|+|.|... ..++.|..++.+|.| .+. -.+-|+.++++++.++.++.....+.+|+.. |+++++
T Consensus 161 t~f~~VRFGNVlgS~G----SVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I 236 (293)
T PF02719_consen 161 TKFSSVRFGNVLGSRG----SVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKI 236 (293)
T ss_dssp -EEEEEEE-EETTGTT----SCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEEC
T ss_pred cEEEEEEecceecCCC----cHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCH
Confidence 8999999999999662 256777888888873 333 3456999999999999999887766688776 799999
Q ss_pred HHHHHHHHHhCC
Q 027969 154 SDILKFLREHYP 165 (216)
Q Consensus 154 ~el~~~i~~~~~ 165 (216)
.|+++.+.+..+
T Consensus 237 ~dlA~~~i~~~g 248 (293)
T PF02719_consen 237 LDLAEAMIELSG 248 (293)
T ss_dssp CCHHHHHHHHTT
T ss_pred HHHHHHHHhhcc
Confidence 999999999986
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.7e-14 Score=101.27 Aligned_cols=198 Identities=15% Similarity=0.086 Sum_probs=144.4
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.|.-|+++.|.++ +. ++...||+ +.||+.+. ..|...-+.- .|...||.||..+|.+-..+..+.|++
T Consensus 138 ~GvHNil~vAa~~-kL-~iFVPSTI-GAFGPtSP---RNPTPdltIQ------RPRTIYGVSKVHAEL~GEy~~hrFg~d 205 (366)
T KOG2774|consen 138 RGVHNILQVAAKH-KL-KVFVPSTI-GAFGPTSP---RNPTPDLTIQ------RPRTIYGVSKVHAELLGEYFNHRFGVD 205 (366)
T ss_pred hhhhHHHHHHHHc-Ce-eEeecccc-cccCCCCC---CCCCCCeeee------cCceeechhHHHHHHHHHHHHhhcCcc
Confidence 3778999999999 86 46668998 77766441 3333333333 344569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCC---CCCccHHHHHHHHcCC---CCCC-CCCceeehhhhHHHHHHhhcCCCCC---ceEEEecCC
Q 027969 81 LVAIHPGTVIGPFFQP---ILNFGAEVILNLINGD---QSFA-FPYIFVEIRDVVYAHIRALEVPKAS---GRYLLAGSV 150 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~---~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~---~~~~~~~~~ 150 (216)
+-++|++.++...-.. ..-....+-.+..+|+ ..-| .+..+.|+.|+.++++..+..+... ..||+.+-.
T Consensus 206 fr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~s 285 (366)
T KOG2774|consen 206 FRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFS 285 (366)
T ss_pred ceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeeceec
Confidence 9999999998753221 1112234445566777 3334 6778999999999999988765432 269999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCc----cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 151 AQHSDILKFLREHYPTLLRSGKLE----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~~~~~~~----~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
++-+|+++.+.+..|..++..... -.+.+++.+|.+.+ +++.|+- ..+...+.-++.-.+
T Consensus 286 ftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~ 351 (366)
T KOG2774|consen 286 FTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHK 351 (366)
T ss_pred cCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHH
Confidence 999999999999998876554332 45667889999999 8899987 777666655554433
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-14 Score=104.22 Aligned_cols=194 Identities=15% Similarity=0.060 Sum_probs=140.6
Q ss_pred CcHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 1 MGTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 1 ~gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
.||++||++.+.+ .+| ||-..||+ ..||..+ +.|-.|.+|..|. ++|+.+|..+-..+..|.+.+
T Consensus 135 vGtLRlLdAi~~c~l~~~V-rfYQAstS-ElyGkv~----e~PQsE~TPFyPR------SPYa~aKmy~~WivvNyREAY 202 (376)
T KOG1372|consen 135 VGTLRLLDAIRACRLTEKV-RFYQASTS-ELYGKVQ----EIPQSETTPFYPR------SPYAAAKMYGYWIVVNYREAY 202 (376)
T ss_pred hhhhhHHHHHHhcCcccce-eEEecccH-hhccccc----CCCcccCCCCCCC------ChhHHhhhhheEEEEEhHHhh
Confidence 3899999999876 244 78999996 9999877 6888898888776 669999999998888888888
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHH-H---HHHcCC-C--CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVI-L---NLINGD-Q--SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~---~~~~~~-~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
++-.|---.++--.|..... +....+ + ++..|. . .++ ..+||-|..|-++|+...+.++.+....+..
T Consensus 203 nmfAcNGILFNHESPRRGen--FVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~PdDfViAT 280 (376)
T KOG1372|consen 203 NMFACNGILFNHESPRRGEN--FVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSPDDFVIAT 280 (376)
T ss_pred cceeeccEeecCCCCccccc--hhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCCCceEEec
Confidence 87666555555555554432 332222 2 233343 2 223 5678999999999999999887766666788
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCC---------C-------------ccCCCCccccchHHH-HHhCCee-eehhhhHH
Q 027969 148 GSVAQHSDILKFLREHYPTLLRSGK---------L-------------EEKYQPTIKVSQERA-KSLGINF-TPWEVGVR 203 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~~~~~---------~-------------~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~ 203 (216)
|+..|++|+++.-....+..-.+.. . .+.......-|.+|+ +.|||+| ..+.+-++
T Consensus 281 ge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVk 360 (376)
T KOG1372|consen 281 GEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVK 360 (376)
T ss_pred CCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhhCCCCccCHHHHHH
Confidence 9999999999988887752211110 0 022223456789999 8899999 99998888
Q ss_pred HHHHH
Q 027969 204 GCIES 208 (216)
Q Consensus 204 ~~~~~ 208 (216)
+++..
T Consensus 361 eMv~~ 365 (376)
T KOG1372|consen 361 EMVAS 365 (376)
T ss_pred HHHHh
Confidence 88754
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.7e-15 Score=110.87 Aligned_cols=126 Identities=20% Similarity=0.114 Sum_probs=72.7
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCcc--ccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV--IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~--~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
.||++|++.|... +.++|+|+||. .+.+.......+.. ..|+. ........+.|..||+++|++++++.++.|
T Consensus 113 ~gt~~ll~la~~~-~~~~~~~iSTa-~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g 187 (249)
T PF07993_consen 113 DGTRNLLRLAAQG-KRKRFHYISTA-YVAGSRPGTIEEKVYPEEEDD---LDPPQGFPNGYEQSKWVAERLLREAAQRHG 187 (249)
T ss_dssp HHHHHHHHHHTSS-S---EEEEEEG-GGTTS-TTT--SSS-HHH--E---EE--TTSEE-HHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhc-cCcceEEeccc-cccCCCCCccccccccccccc---chhhccCCccHHHHHHHHHHHHHHHHhcCC
Confidence 3899999999977 55699999994 77766542111111 11111 111122335699999999999999998889
Q ss_pred CcEEEEcCCCccCCCCCCCCC--c-cHHHH-HHHHcCC-CCCC----CCCceeehhhhHHHH
Q 027969 79 IDLVAIHPGTVIGPFFQPILN--F-GAEVI-LNLINGD-QSFA----FPYIFVEIRDVVYAH 131 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~--~-~~~~~-~~~~~~~-~~~~----~~~~~i~v~D~a~~~ 131 (216)
++++|+||+.|+|.......+ . ...++ ..+..|. +..+ ...++++||.+|++|
T Consensus 188 ~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 188 LPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp --EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 999999999999955433222 1 23333 3344555 5444 358999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.8e-14 Score=111.76 Aligned_cols=129 Identities=14% Similarity=0.053 Sum_probs=98.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+++++|++. ++++||++||. ++++.. ..|..+|...|+.+.. +..++++
T Consensus 161 ~~~~ll~aa~~~-gv~r~V~iSS~-~v~~p~------------------------~~~~~sK~~~E~~l~~--~~~gl~~ 212 (390)
T PLN02657 161 ATKNSLDAGREV-GAKHFVLLSAI-CVQKPL------------------------LEFQRAKLKFEAELQA--LDSDFTY 212 (390)
T ss_pred HHHHHHHHHHHc-CCCEEEEEeec-cccCcc------------------------hHHHHHHHHHHHHHHh--ccCCCCE
Confidence 578999999998 89999999997 665211 2288999999998865 3458999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCC--CCC-CC---CceeehhhhHHHHHHhhcCCCCC-ceEEEec--CCCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA-FP---YIFVEIRDVVYAHIRALEVPKAS-GRYLLAG--SVAQ 152 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~-~~---~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~~--~~~s 152 (216)
+++||+.+||.. ...+..+..|.+ .++ +. .++||++|+|+++..++..+... ..|++++ +.+|
T Consensus 213 tIlRp~~~~~~~--------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S 284 (390)
T PLN02657 213 SIVRPTAFFKSL--------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALT 284 (390)
T ss_pred EEEccHHHhccc--------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccC
Confidence 999999999742 223445555662 344 33 25799999999999999765443 4787763 4799
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
++|+++++.+.++.
T Consensus 285 ~~Eia~~l~~~lG~ 298 (390)
T PLN02657 285 PLEQGEMLFRILGK 298 (390)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999864
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-14 Score=116.60 Aligned_cols=163 Identities=17% Similarity=0.161 Sum_probs=106.1
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCC-----------------CCCc--------------
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW-----------------FSNP-------------- 49 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~-----------------~~~~-------------- 49 (216)
.||.+|+++|.+.+++++|||+||. .|||.......+.++.... ..++
T Consensus 245 ~GT~nLLelA~~~~~lk~fV~vSTa-yVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~ 323 (605)
T PLN02503 245 RGPCHLMSFAKKCKKLKLFLQVSTA-YVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHG 323 (605)
T ss_pred HHHHHHHHHHHHcCCCCeEEEccCc-eeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcc
Confidence 3799999999887567899999997 9998763111122222000 0000
Q ss_pred -----------------ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCccCCCCCCCCC------ccHHHHH
Q 027969 50 -----------------VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN------FGAEVIL 106 (216)
Q Consensus 50 -----------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~ 106 (216)
......++.|..||.++|++++++. .+++++|+||+.|.+....|..+ .....+.
T Consensus 324 ~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~ 401 (605)
T PLN02503 324 FQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVL 401 (605)
T ss_pred cchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhh
Confidence 0012344779999999999998765 37999999999994433222110 1112222
Q ss_pred HHHcCC-CCCC----CCCceeehhhhHHHHHHhhcC-C----CCCceEEEe-c--CCCCHHHHHHHHHHhCCC
Q 027969 107 NLINGD-QSFA----FPYIFVEIRDVVYAHIRALEV-P----KASGRYLLA-G--SVAQHSDILKFLREHYPT 166 (216)
Q Consensus 107 ~~~~~~-~~~~----~~~~~i~v~D~a~~~~~~~~~-~----~~~~~~~~~-~--~~~s~~el~~~i~~~~~~ 166 (216)
...+|. ..+. ...|+|+||.++.+++.++.. . ....+|+++ + .++++.++++.+.+.+..
T Consensus 402 ~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 402 YYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred heeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 223554 3222 466899999999999998532 1 123478876 5 689999999999987743
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.7e-13 Score=94.47 Aligned_cols=188 Identities=19% Similarity=0.149 Sum_probs=129.4
Q ss_pred cHHHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.|+.|+++..+++.. +.+|.+|.. ++|-... ...|+|++..... +...+--+.-|...+...+ ..+
T Consensus 107 ~t~~la~aI~~aPq~~~~~Vlv~gv-a~y~pS~----s~eY~e~~~~qgf------d~~srL~l~WE~aA~~~~~--~~r 173 (315)
T KOG3019|consen 107 VTSKLADAINNAPQEARPTVLVSGV-AVYVPSE----SQEYSEKIVHQGF------DILSRLCLEWEGAALKANK--DVR 173 (315)
T ss_pred HHHHHHHHHhcCCCCCCCeEEEEee-EEecccc----ccccccccccCCh------HHHHHHHHHHHHHhhccCc--cee
Confidence 477889999887654 478999998 9997765 6789998776654 2122222233333333322 489
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
++++|.+.|.|.+.. ....++.-+..|. ..++ +.+.|||++|++..+..+++++...|+.|+. +++.+..|
T Consensus 174 ~~~iR~GvVlG~gGG----a~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~E 249 (315)
T KOG3019|consen 174 VALIRIGVVLGKGGG----ALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGE 249 (315)
T ss_pred EEEEEEeEEEecCCc----chhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHH
Confidence 999999999998853 3445555555555 4444 5567999999999999999999888987766 89999999
Q ss_pred HHHHHHHhCCCC---CCCCCCc----cCCCCccccc-----hHHHHHhCCee--eehhhhHHHHH
Q 027969 156 ILKFLREHYPTL---LRSGKLE----EKYQPTIKVS-----QERAKSLGINF--TPWEVGVRGCI 206 (216)
Q Consensus 156 l~~~i~~~~~~~---~~~~~~~----~~~~~~~~~d-----~~k~~~lg~~~--~~~~~~i~~~~ 206 (216)
+.+.+...+... ++|.... -+..-...+. ..|+.++||++ ..+.++++++.
T Consensus 250 f~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 250 FCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred HHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence 999999998543 3333221 1111122233 44556689887 77888888764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=101.18 Aligned_cols=131 Identities=21% Similarity=0.219 Sum_probs=100.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
+++.|+..|++. ++.||||+|+.++-. . ..|-|-.+|.++|..+++.. .+.
T Consensus 156 ~aerlAricke~-GVerfIhvS~Lganv------------------~------s~Sr~LrsK~~gE~aVrdaf----PeA 206 (391)
T KOG2865|consen 156 IAERLARICKEA-GVERFIHVSCLGANV------------------K------SPSRMLRSKAAGEEAVRDAF----PEA 206 (391)
T ss_pred HHHHHHHHHHhh-Chhheeehhhccccc------------------c------ChHHHHHhhhhhHHHHHhhC----Ccc
Confidence 678899999999 999999999982110 0 11349999999999998874 578
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-C---CCceeehhhhHHHHHHhhcCCCCCc-eE-EEecCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-F---PYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~s~~ 154 (216)
+|+||+.|||..+.- .+....++++ -|- +.+. + ....|||-|+|.+|+.++..+...| .| .++++..++.
T Consensus 207 tIirPa~iyG~eDrf-ln~ya~~~rk--~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~ 283 (391)
T KOG2865|consen 207 TIIRPADIYGTEDRF-LNYYASFWRK--FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS 283 (391)
T ss_pred eeechhhhcccchhH-HHHHHHHHHh--cCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence 999999999988752 1222334443 233 4444 3 2359999999999999999988877 78 6678999999
Q ss_pred HHHHHHHHhC
Q 027969 155 DILKFLREHY 164 (216)
Q Consensus 155 el~~~i~~~~ 164 (216)
|+++.+.+..
T Consensus 284 eLvd~my~~~ 293 (391)
T KOG2865|consen 284 ELVDIMYDMA 293 (391)
T ss_pred HHHHHHHHHH
Confidence 9999988875
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-13 Score=105.11 Aligned_cols=157 Identities=18% Similarity=0.129 Sum_probs=100.1
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.||..+++.|... ++|.|+|+||+ +|+............+|+++.... .....+.|++||+.+|.+++++.+. |++
T Consensus 113 lGT~evlrLa~~g-k~Kp~~yVSsi-sv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~GY~~SKwvaE~Lvr~A~~r-GLp 188 (382)
T COG3320 113 LGTAEVLRLAATG-KPKPLHYVSSI-SVGETEYYSNFTVDFDEISPTRNV-GQGLAGGYGRSKWVAEKLVREAGDR-GLP 188 (382)
T ss_pred HhHHHHHHHHhcC-CCceeEEEeee-eeccccccCCCccccccccccccc-cCccCCCcchhHHHHHHHHHHHhhc-CCC
Confidence 4899999999998 77899999998 888765422222223322222211 1123356999999999999999988 999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC---CCCceeehhhhHH-----------HHHHhhcCC-CCCc
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVY-----------AHIRALEVP-KASG 142 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~-----------~~~~~~~~~-~~~~ 142 (216)
++|+||+.|-|+.....+ ....++.++.++- ..+| ...+.+.++++++ ++..+...+ ....
T Consensus 189 v~I~Rpg~I~gds~tG~~-n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~ 267 (382)
T COG3320 189 VTIFRPGYITGDSRTGAL-NTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFN 267 (382)
T ss_pred eEEEecCeeeccCccCcc-ccchHHHHHHHHHHHhCCCCCcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhh
Confidence 999999999998875444 3345555555444 2333 3334444333333 333333221 2223
Q ss_pred eEEE--ecCCCCHHHHHHHHHH
Q 027969 143 RYLL--AGSVAQHSDILKFLRE 162 (216)
Q Consensus 143 ~~~~--~~~~~s~~el~~~i~~ 162 (216)
.|.+ -+..+...++.+.+.+
T Consensus 268 ~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 268 QLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred heecccCCCccchhHHHHhHhh
Confidence 4442 2778899999988887
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.5e-12 Score=107.18 Aligned_cols=151 Identities=18% Similarity=0.193 Sum_probs=100.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.|++++|++. ++ ++||+||. ||... . |. .+|.++.. +++++
T Consensus 82 Gt~nLleAA~~~-Gv-RiV~~SS~---~G~~~----------------~--------~~----~aE~ll~~----~~~p~ 124 (699)
T PRK12320 82 GLAHVANAAARA-GA-RLLFVSQA---AGRPE----------------L--------YR----QAETLVST----GWAPS 124 (699)
T ss_pred HHHHHHHHHHHc-CC-eEEEEECC---CCCCc----------------c--------cc----HHHHHHHh----cCCCE
Confidence 789999999998 76 79999985 33210 0 22 36666543 46899
Q ss_pred EEEcCCCccCCCCCCCC-CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPIL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~ 159 (216)
+++|++++||++..... +.+..++.....+ ....++|++|++++++.+++... .|+||++ ++.+|+.|++++
T Consensus 125 ~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~-----~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~el~~~ 198 (699)
T PRK12320 125 LVIRIAPPVGRQLDWMVCRTVATLLRSKVSA-----RPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVVTAWRL 198 (699)
T ss_pred EEEeCceecCCCCcccHhHHHHHHHHHHHcC-----CceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHHHHHH
Confidence 99999999999654321 1223333333333 35567999999999999997643 4588665 788999999999
Q ss_pred HHHhCCCCCCCCCCccCCCCccccchHHH-HHhCCee-eeh
Q 027969 160 LREHYPTLLRSGKLEEKYQPTIKVSQERA-KSLGINF-TPW 198 (216)
Q Consensus 160 i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~ 198 (216)
+....+...+.. ........-|.... ..++|.| ..+
T Consensus 199 i~~~~p~~~~~~---~~~~~~~~pdi~~a~~~~~w~~~~~~ 236 (699)
T PRK12320 199 LRSVDPHLRTRR---VRSWEQLIPEVDIAAVQEDWNFEFGW 236 (699)
T ss_pred HHHhCCCccccc---cccHHHhCCCCchhhhhcCCCCcchH
Confidence 987754332211 12223445666676 6678888 444
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.5e-12 Score=97.41 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=84.1
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCcE
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGIDL 81 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~ 81 (216)
+.+++++|+++ +++|||++||. .++.... .+...|+.+ +. .++++
T Consensus 85 ~~~~i~aa~~~-gv~~~V~~Ss~-~~~~~~~----------------------------~~~~~~~~l----~~~~gi~~ 130 (285)
T TIGR03649 85 MIKFIDFARSK-GVRRFVLLSAS-IIEKGGP----------------------------AMGQVHAHL----DSLGGVEY 130 (285)
T ss_pred HHHHHHHHHHc-CCCEEEEeecc-ccCCCCc----------------------------hHHHHHHHH----HhccCCCE
Confidence 57899999999 99999999996 3321100 011123333 33 38999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHc-CCC--CCC-CCCceeehhhhHHHHHHhhcCCCCC-ceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLIN-GDQ--SFA-FPYIFVEIRDVVYAHIRALEVPKAS-GRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~--~~~-~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~-~~~~s~~e 155 (216)
+++||+++++...... ....+.. +.. ..+ +..+|+|++|+|+++..++..+... +.|++. ++.+|+.|
T Consensus 131 tilRp~~f~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~e 204 (285)
T TIGR03649 131 TVLRPTWFMENFSEEF------HVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDD 204 (285)
T ss_pred EEEeccHHhhhhcccc------cccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHH
Confidence 9999999986432110 0111222 221 223 6778999999999999999876444 467555 68999999
Q ss_pred HHHHHHHhCCC
Q 027969 156 ILKFLREHYPT 166 (216)
Q Consensus 156 l~~~i~~~~~~ 166 (216)
+++.+.+.++.
T Consensus 205 ia~~l~~~~g~ 215 (285)
T TIGR03649 205 VAEILSRVLGR 215 (285)
T ss_pred HHHHHHHHhCC
Confidence 99999999864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.4e-10 Score=83.59 Aligned_cols=135 Identities=20% Similarity=0.242 Sum_probs=87.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.++++++.+. ++++||++||+ ++|+... ..+..+.. ... .....|..+|..+|+.++. .++++
T Consensus 111 ~~~~ll~a~~~~-~~~~iV~iSS~-~v~g~~~----~~~~~~~~--~~~---~~~~~~~~~k~~~e~~l~~----~gi~~ 175 (251)
T PLN00141 111 GTVNLVEACRKA-GVTRFILVSSI-LVNGAAM----GQILNPAY--IFL---NLFGLTLVAKLQAEKYIRK----SGINY 175 (251)
T ss_pred HHHHHHHHHHHc-CCCEEEEEccc-cccCCCc----ccccCcch--hHH---HHHHHHHHHHHHHHHHHHh----cCCcE
Confidence 678999999988 88999999998 8887532 12221110 000 0112255678888887653 48999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eE-EEe--cC-CCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA--GS-VAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~--~~-~~s~~el 156 (216)
+++||+++++....... . ...+. .....+++.+|+|+++..++..+...+ ++ +++ +. ..+++++
T Consensus 176 ~iirpg~~~~~~~~~~~--~------~~~~~---~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (251)
T PLN00141 176 TIVRPGGLTNDPPTGNI--V------MEPED---TLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDL 244 (251)
T ss_pred EEEECCCccCCCCCceE--E------ECCCC---ccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHH
Confidence 99999999986422100 0 00000 012347999999999999998766544 45 443 22 3688888
Q ss_pred HHHHHH
Q 027969 157 LKFLRE 162 (216)
Q Consensus 157 ~~~i~~ 162 (216)
...+++
T Consensus 245 ~~~~~~ 250 (251)
T PLN00141 245 FASIKQ 250 (251)
T ss_pred HHHhhc
Confidence 888765
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.9e-10 Score=81.63 Aligned_cols=107 Identities=28% Similarity=0.318 Sum_probs=75.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
.+++++++|+++ +++++|++||. .+|.... .....+..+.. ..|...|..+|+.+. ..++++
T Consensus 77 ~~~~~~~a~~~~-~~~~~v~~s~~-~~~~~~~----~~~~~~~~~~~--------~~~~~~~~~~e~~~~----~~~~~~ 138 (183)
T PF13460_consen 77 AAKNIIEAAKKA-GVKRVVYLSSA-GVYRDPP----GLFSDEDKPIF--------PEYARDKREAEEALR----ESGLNW 138 (183)
T ss_dssp HHHHHHHHHHHT-TSSEEEEEEET-TGTTTCT----SEEEGGTCGGG--------HHHHHHHHHHHHHHH----HSTSEE
T ss_pred cccccccccccc-ccccceeeecc-ccCCCCC----cccccccccch--------hhhHHHHHHHHHHHH----hcCCCE
Confidence 468999999999 89999999997 8887543 22222221111 238899999988874 348999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+++||+.+||+.... ...... .+ ....++||.+|+|++++.++++
T Consensus 139 ~ivrp~~~~~~~~~~-~~~~~~------~~----~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 139 TIVRPGWIYGNPSRS-YRLIKE------GG----PQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EEEEESEEEBTTSSS-EEEESS------TS----TTSHCEEEHHHHHHHHHHHHH-
T ss_pred EEEECcEeEeCCCcc-eeEEec------cC----CCCcCcCCHHHHHHHHHHHhCC
Confidence 999999999987431 101101 11 1455899999999999998863
|
... |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.6e-09 Score=80.90 Aligned_cols=136 Identities=20% Similarity=0.164 Sum_probs=88.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +.++||++||.++..+.+ +.+.|+.||...|.+++.++++
T Consensus 110 g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 110 GSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQIAYP----------------------GFSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCCC----------------------CCchhHHHHHHHHHHHHHHHHHh
Confidence 567788886 444 667999999973222110 0134999999999999888765
Q ss_pred --cCCcEEEEcCCCc---cCCCCCCCC-----C-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 77 --NGIDLVAIHPGTV---IGPFFQPIL-----N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 77 --~~~~~~ilR~~~v---~G~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
.+++++++||+.+ ||++..... . .....+.+..... ...-+.+++|++++++.++..+.....|+
T Consensus 167 ~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~a~~~~~~~~~~~~~~~ 242 (276)
T PRK06482 167 APFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG----SFAIPGDPQKMVQAMIASADQTPAPRRLT 242 (276)
T ss_pred hccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc----cCCCCCCHHHHHHHHHHHHcCCCCCeEEe
Confidence 5899999999988 665432110 0 1111222222221 11114689999999999998765555787
Q ss_pred Ee-cCCCCHHHHHHHHHHhC
Q 027969 146 LA-GSVAQHSDILKFLREHY 164 (216)
Q Consensus 146 ~~-~~~~s~~el~~~i~~~~ 164 (216)
++ +...++.+++..+.+.+
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 243 LGSDAYASIRAALSERLAAL 262 (276)
T ss_pred cChHHHHHHHHHHHHHHHHH
Confidence 66 66678888877776665
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.5e-09 Score=86.78 Aligned_cols=164 Identities=22% Similarity=0.220 Sum_probs=106.6
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcc--------------------cccccchhHH
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV--------------------LCKENKEWYS 60 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~--------------------~~~~~~~~Y~ 60 (216)
.||+++++.|+++.+.+-+||+||. .+-.... ...+.++.+...+++. .....++.|.
T Consensus 132 ~Gt~~~l~lak~~~~l~~~vhVSTA-y~n~~~~-~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYt 209 (467)
T KOG1221|consen 132 RGTRNVLQLAKEMVKLKALVHVSTA-YSNCNVG-HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYT 209 (467)
T ss_pred HhHHHHHHHHHHhhhhheEEEeehh-heecccc-cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCcee
Confidence 3899999999998899999999997 4432211 1112233222211111 1123557799
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcCCCccCCCCCCCCCc------cHHHHHHHHcCC-CCC--C--CCCceeehhhhHH
Q 027969 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF------GAEVILNLINGD-QSF--A--FPYIFVEIRDVVY 129 (216)
Q Consensus 61 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~------~~~~~~~~~~~~-~~~--~--~~~~~i~v~D~a~ 129 (216)
.+|.++|.++.+.+. +++++|+||+.|......|-.+. ...++....+|. ..+ . ...++|.+|.++-
T Consensus 210 fTKal~E~~i~~~~~--~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN 287 (467)
T KOG1221|consen 210 FTKALAEMVIQKEAE--NLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVN 287 (467)
T ss_pred ehHhhHHHHHHhhcc--CCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHH
Confidence 999999999988754 79999999999999776553211 112222233333 111 1 4557999999999
Q ss_pred HHHHhhcC----CCC--CceEEEe-c--CCCCHHHHHHHHHHhCCCCC
Q 027969 130 AHIRALEV----PKA--SGRYLLA-G--SVAQHSDILKFLREHYPTLL 168 (216)
Q Consensus 130 ~~~~~~~~----~~~--~~~~~~~-~--~~~s~~el~~~i~~~~~~~~ 168 (216)
+++.+... ... -.+|+++ + .++++.++.+...+.+...+
T Consensus 288 ~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~P 335 (467)
T KOG1221|consen 288 AMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIP 335 (467)
T ss_pred HHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCC
Confidence 99977621 111 2278665 3 47999999999999875443
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-07 Score=71.21 Aligned_cols=101 Identities=23% Similarity=0.155 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...|.+++.++++. ++++.++||+.++++...........+........ ..++|+|++|+++++..++
T Consensus 148 y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 148 YSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY----PLQDFATPDDVANAVLFLA 223 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHc
Confidence 9999999999999987654 79999999999988754321111122222222211 3467999999999999999
Q ss_pred cCC--CCCc-eEEEe-cCCCCHHHHHHHHHHh
Q 027969 136 EVP--KASG-RYLLA-GSVAQHSDILKFLREH 163 (216)
Q Consensus 136 ~~~--~~~~-~~~~~-~~~~s~~el~~~i~~~ 163 (216)
... ...| .+++. |...+..||++.+.+.
T Consensus 224 ~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 224 SPAARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred CchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 643 2234 44454 6678899999987653
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.1e-07 Score=70.47 Aligned_cols=120 Identities=21% Similarity=0.233 Sum_probs=77.5
Q ss_pred HHHHHHHH-hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cC
Q 027969 3 TLNVLRSC-AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NG 78 (216)
Q Consensus 3 t~~ll~~~-~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~ 78 (216)
+.++++++ ++. +.++||++||.++.++.. ..+.|+.+|...+.+++.++++ .+
T Consensus 123 ~~~~l~~~~~~~-~~~~iv~~ss~~~~~~~~----------------------~~~~y~~sk~a~~~~~~~la~~~~~~~ 179 (262)
T PRK13394 123 TKAALKHMYKDD-RGGVVIYMGSVHSHEASP----------------------LKSAYVTAKHGLLGLARVLAKEGAKHN 179 (262)
T ss_pred HHHHHHHHHhhc-CCcEEEEEcchhhcCCCC----------------------CCcccHHHHHHHHHHHHHHHHHhhhcC
Confidence 56778888 555 678999999973332111 0123999999999998888765 48
Q ss_pred CcEEEEcCCCccCCCCCCCCCc--------cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEe
Q 027969 79 IDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLA 147 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~ 147 (216)
++++++||+.++++........ .......+..+. ....+|+|++|+++++..++..... .| .|++.
T Consensus 180 i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~ 256 (262)
T PRK13394 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGK---TVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVS 256 (262)
T ss_pred eEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeC
Confidence 9999999999999864321000 011122222111 0345799999999999999975432 24 56555
Q ss_pred c
Q 027969 148 G 148 (216)
Q Consensus 148 ~ 148 (216)
+
T Consensus 257 ~ 257 (262)
T PRK13394 257 H 257 (262)
T ss_pred C
Confidence 4
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.7e-07 Score=69.80 Aligned_cols=135 Identities=16% Similarity=0.094 Sum_probs=86.3
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +.+++|++||. ..+.... ..+.|+.+|...+.+.+.++.+
T Consensus 111 ~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~la~e~ 167 (275)
T PRK08263 111 GALWVTQAVLPYLREQ-RSGHIIQISSI-GGISAFP---------------------MSGIYHASKWALEGMSEALAQEV 167 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEcCh-hhcCCCC---------------------CccHHHHHHHHHHHHHHHHHHHh
Confidence 344455544 455 56789999997 4442211 0023999999999988887664
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCC---cc---HHHHHHHHcCCCCCCCCCce-eehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILN---FG---AEVILNLINGDQSFAFPYIF-VEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
.|+++.++||+.+..+....... .. ......+... . ....+ ++.+|++++++.+++.+...+.|+.+
T Consensus 168 ~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~ 243 (275)
T PRK08263 168 AEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---W-SERSVDGDPEAAAEALLKLVDAENPPLRLFLG 243 (275)
T ss_pred hhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---H-HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 58999999999987654321100 00 1111111110 1 12234 88999999999999987767666544
Q ss_pred --cCCCCHHHHHHHHHHh
Q 027969 148 --GSVAQHSDILKFLREH 163 (216)
Q Consensus 148 --~~~~s~~el~~~i~~~ 163 (216)
+..+++.++.+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 244 SGVLDLAKADYERRLATW 261 (275)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 3578888998888874
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.5e-07 Score=69.93 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=75.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.+|...|.+++.+++..
T Consensus 121 ~~~~l~~~~l~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~l~~~~~~~~ 177 (274)
T PRK07775 121 GANRLATAVLPGMIER-RRGDLIFVGSD-VALRQRP---------------------HMGAYGAAKAGLEAMVTNLQMEL 177 (274)
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEECCh-HhcCCCC---------------------CcchHHHHHHHHHHHHHHHHHHh
Confidence 4556666654 33 44689999997 5553211 01239999999999999987654
Q ss_pred ---CCcEEEEcCCCccCCC-CCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 78 ---GIDLVAIHPGTVIGPF-FQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
|++++++||+.+.++. ..........++...... .. ....++|++|+|++++.+++.+..+..|++.
T Consensus 178 ~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 178 EGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW---GQARHDYFLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred cccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh---cccccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 8999999999885542 211101111222221111 01 3456999999999999999876433456554
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.9e-07 Score=67.34 Aligned_cols=117 Identities=19% Similarity=0.137 Sum_probs=76.2
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++.+ ++. +.++||++||.+..++... ...|+.+|...|.+++.+++.
T Consensus 118 ~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~~~~~~----------------------~~~y~~sK~~~~~~~~~~~~~~ 174 (249)
T PRK12825 118 GVFHLLRAVVPPMRKQ-RGGRIVNISSVAGLPGWPG----------------------RSNYAAAKAGLVGLTKALAREL 174 (249)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECccccCCCCCC----------------------chHHHHHHHHHHHHHHHHHHHH
Confidence 345566665 445 6789999999833332110 123999999999999887664
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
.+++++++||+.++|+...... ....... .+..+ ...+++.+|+++++..++.... ..| .|++.+
T Consensus 175 ~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~----~~~~~-~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 175 AEYGITVNMVAPGDIDTDMKEATI--EEAREAK----DAETP-LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred hhcCeEEEEEEECCccCCcccccc--chhHHhh----hccCC-CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 4899999999999998754321 1111111 11112 2338999999999999996643 234 565553
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.1e-07 Score=70.37 Aligned_cols=125 Identities=18% Similarity=0.133 Sum_probs=78.8
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK-- 75 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-- 75 (216)
|+.++++++ ++. +..+||++||.+++++... ...|+.+|...|.+++.++.
T Consensus 115 ~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~----------------------~~~Y~~sK~~~~~~~~~l~~~~ 171 (280)
T PRK06914 115 GAISVTQAVLPYMRKQ-KSGKIINISSISGRVGFPG----------------------LSPYVSSKYALEGFSESLRLEL 171 (280)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECcccccCCCCC----------------------CchhHHhHHHHHHHHHHHHHHh
Confidence 445555554 445 5678999999745554211 12399999999999888763
Q ss_pred -HcCCcEEEEcCCCccCCCCCCCCC----------ccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCce
Q 027969 76 -ENGIDLVAIHPGTVIGPFFQPILN----------FGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGR 143 (216)
Q Consensus 76 -~~~~~~~ilR~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~ 143 (216)
..+++++++||+.+.++....... .....+..+.. ..+ ....+++++|+|++++.+++++.....
T Consensus 172 ~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~ 248 (280)
T PRK06914 172 KPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK---HINSGSDTFGNPIDVANLIVEIAESKRPKLR 248 (280)
T ss_pred hhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH---HHhhhhhccCCHHHHHHHHHHHHcCCCCCcc
Confidence 448999999999998874321100 01111111111 011 234578999999999999998766556
Q ss_pred EEEe-cCCCC
Q 027969 144 YLLA-GSVAQ 152 (216)
Q Consensus 144 ~~~~-~~~~s 152 (216)
|+++ +..++
T Consensus 249 ~~~~~~~~~~ 258 (280)
T PRK06914 249 YPIGKGVKLM 258 (280)
T ss_pred cccCCchHHH
Confidence 6654 44433
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.2e-07 Score=66.95 Aligned_cols=118 Identities=21% Similarity=0.248 Sum_probs=74.1
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+..+++++ ++. ++++||++||.+.+.+... . +.|+.+|...|.+++.++.+
T Consensus 112 g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~~--------------~--------~~y~~sk~a~~~~~~~~~~~~ 168 (255)
T TIGR01963 112 SAFHTIRAALPHMKKQ-GWGRIINIASAHGLVASPF--------------K--------SAYVAAKHGLIGLTKVLALEV 168 (255)
T ss_pred HHHHHHHHHHHHHHhc-CCeEEEEEcchhhcCCCCC--------------C--------chhHHHHHHHHHHHHHHHHHh
Confidence 334445544 555 6789999999733332110 0 23999999999998877654
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--C--------CC-C-CCCceeehhhhHHHHHHhhcCCCC--
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--Q--------SF-A-FPYIFVEIRDVVYAHIRALEVPKA-- 140 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~--------~~-~-~~~~~i~v~D~a~~~~~~~~~~~~-- 140 (216)
.+++++++||+.++++.... .+.....+. . .. . ...+++|++|+|++++.++.....
T Consensus 169 ~~~~i~v~~i~pg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~ 241 (255)
T TIGR01963 169 AAHGITVNAICPGYVRTPLVEK-------QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGI 241 (255)
T ss_pred hhcCeEEEEEecCccccHHHHH-------HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCc
Confidence 38999999999999875311 011110000 0 00 1 345699999999999999976322
Q ss_pred Cc-eEEEecC
Q 027969 141 SG-RYLLAGS 149 (216)
Q Consensus 141 ~~-~~~~~~~ 149 (216)
.| .|+++++
T Consensus 242 ~g~~~~~~~g 251 (255)
T TIGR01963 242 TGQAIVLDGG 251 (255)
T ss_pred cceEEEEcCc
Confidence 33 5666643
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-06 Score=66.15 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=75.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
+..++.++++. +.++||++||.+.+++... .+.|+.+|...+.+.+.++.+ .++
T Consensus 120 ~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~----------------------~~~y~~~k~a~~~~~~~l~~~~~~~~i 176 (258)
T PRK12429 120 TKAALPIMKAQ-GGGRIINMASVHGLVGSAG----------------------KAAYVSAKHGLIGLTKVVALEGATHGV 176 (258)
T ss_pred HHHHHHHHHhc-CCeEEEEEcchhhccCCCC----------------------cchhHHHHHHHHHHHHHHHHHhcccCe
Confidence 44555666665 6789999999744443211 133999999999888877654 379
Q ss_pred cEEEEcCCCccCCCCCCCCCc--------cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 80 DLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
++.++||+.++++........ ....+...... . .....|+|++|+|+++..++..... .| .|++.+
T Consensus 177 ~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 253 (258)
T PRK12429 177 TVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP--L-VPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG 253 (258)
T ss_pred EEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc--c-CCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence 999999999998764321000 00001111100 0 0335699999999999999875332 24 566654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.2e-08 Score=71.64 Aligned_cols=135 Identities=24% Similarity=0.256 Sum_probs=84.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEE
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 82 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 82 (216)
..+++++|.+. +|++||+ ||....+. +.....|. .+.-..|...|+.+++. +++++
T Consensus 83 ~~~li~Aa~~a-gVk~~v~-ss~~~~~~------------~~~~~~p~------~~~~~~k~~ie~~l~~~----~i~~t 138 (233)
T PF05368_consen 83 QKNLIDAAKAA-GVKHFVP-SSFGADYD------------ESSGSEPE------IPHFDQKAEIEEYLRES----GIPYT 138 (233)
T ss_dssp HHHHHHHHHHH-T-SEEEE-SEESSGTT------------TTTTSTTH------HHHHHHHHHHHHHHHHC----TSEBE
T ss_pred hhhHHHhhhcc-ccceEEE-EEeccccc------------cccccccc------chhhhhhhhhhhhhhhc----cccce
Confidence 57899999999 8999996 44323331 11111111 22445788888777444 99999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC--C--CCcee-ehhhhHHHHHHhhcCCCCC--ce-EEEecCCCC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA--F--PYIFV-EIRDVVYAHIRALEVPKAS--GR-YLLAGSVAQ 152 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~--~--~~~~i-~v~D~a~~~~~~~~~~~~~--~~-~~~~~~~~s 152 (216)
++|++..+....... .. ........ ..+. + ...++ +.+|+++++..++..+... +. +.+.++.+|
T Consensus 139 ~i~~g~f~e~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t 213 (233)
T PF05368_consen 139 IIRPGFFMENLLPPF----AP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLT 213 (233)
T ss_dssp EEEE-EEHHHHHTTT----HH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEE
T ss_pred eccccchhhhhhhhh----cc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCC
Confidence 999998776432210 00 00111111 1111 2 23464 9999999999999887655 33 466688899
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
.+|+++.+.+.+|+
T Consensus 214 ~~eia~~~s~~~G~ 227 (233)
T PF05368_consen 214 YNEIAAILSKVLGK 227 (233)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCC
Confidence 99999999998764
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.2e-06 Score=64.95 Aligned_cols=117 Identities=21% Similarity=0.109 Sum_probs=72.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +..+||++||. ..++... .+|+.||...+.+++.++.+. +++
T Consensus 125 ~~~~~~~~~~-~~g~iv~~sS~-~~~~~~~-----------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~ 179 (260)
T PRK12823 125 RAVLPHMLAQ-GGGAIVNVSSI-ATRGINR-----------------------VPYSAAKGGVNALTASLAFEYAEHGIR 179 (260)
T ss_pred HHHHHHHHhc-CCCeEEEEcCc-cccCCCC-----------------------CccHHHHHHHHHHHHHHHHHhcccCcE
Confidence 3455555555 55689999997 5542110 239999999999999987654 899
Q ss_pred EEEEcCCCccCCCCC---------C-CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe
Q 027969 81 LVAIHPGTVIGPFFQ---------P-ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~ 147 (216)
+.+++|+.|+++... . .......++.....+. + ..-+.+++|+|+++..++.... ..| .+++.
T Consensus 180 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~ 255 (260)
T PRK12823 180 VNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS---L-MKRYGTIDEQVAAILFLASDEASYITGTVLPVG 255 (260)
T ss_pred EEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC---C-cccCCCHHHHHHHHHHHcCcccccccCcEEeec
Confidence 999999999997311 0 0001112222222221 1 1124578999999999886532 233 55554
Q ss_pred cC
Q 027969 148 GS 149 (216)
Q Consensus 148 ~~ 149 (216)
++
T Consensus 256 gg 257 (260)
T PRK12823 256 GG 257 (260)
T ss_pred CC
Confidence 43
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=64.77 Aligned_cols=86 Identities=20% Similarity=0.166 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
+.|+.||..+|.+++.++++. +++++++||+.++|+..... ...........+.+ +. .+.+++|+|+++..+
T Consensus 154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~-~~---~~~~~~d~a~~~~~~ 227 (249)
T PRK09135 154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS--FDEEARQAILARTP-LK---RIGTPEDIAEAVRFL 227 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc--CCHHHHHHHHhcCC-cC---CCcCHHHHHHHHHHH
Confidence 349999999999999988764 69999999999999986432 22222223333321 11 123589999999766
Q ss_pred hcCC-CCCc-eEEEec
Q 027969 135 LEVP-KASG-RYLLAG 148 (216)
Q Consensus 135 ~~~~-~~~~-~~~~~~ 148 (216)
+... ...| .|++.+
T Consensus 228 ~~~~~~~~g~~~~i~~ 243 (249)
T PRK09135 228 LADASFITGQILAVDG 243 (249)
T ss_pred cCccccccCcEEEECC
Confidence 6432 2234 677663
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.4e-06 Score=65.48 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=76.8
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++.+. ....++|++||.+..+... .+..+. .+.|+.||...|.+++.++.+ .
T Consensus 112 ~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~--------~~~Y~~sK~a~e~~~~~l~~~~~~~ 174 (248)
T PRK07806 112 AQRNLARAALPLMPAGSRVVFVTSHQAHFIPT---------VKTMPE--------YEPVARSKRAGEDALRALRPELAEK 174 (248)
T ss_pred HHHHHHHHHHhhccCCceEEEEeCchhhcCcc---------ccCCcc--------ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 678899988763 1224899999962322111 111111 134999999999999998654 4
Q ss_pred CCcEEEEcCCCccCCCCCCCCC-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSV 150 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~ 150 (216)
++++.+++|+.+-++-...... .....+... .. ....+++++|+|+++..+++.+...| .|++++..
T Consensus 175 ~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~ 243 (248)
T PRK07806 175 GIGFVVVSGDMIEGTVTATLLNRLNPGAIEAR-----RE-AAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGAD 243 (248)
T ss_pred CeEEEEeCCccccCchhhhhhccCCHHHHHHH-----Hh-hhcccCCHHHHHHHHHHHhhccccCccEEEecCcc
Confidence 7899999988776543210000 000000000 00 23469999999999999998765556 57666443
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.8e-06 Score=66.07 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=76.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..++|++||.++..+.. +...|+.+|...|.+++.++.+
T Consensus 112 g~~~l~~~~~~~~~~~-~~~~iv~iSS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 112 GAVAMTKAVLPGMRAR-RRGHIVNITSMGGLITMP----------------------GIGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred HHHHHHHHHHHHHhcc-CCCEEEEEecccccCCCC----------------------CcchhHHHHHHHHHHHHHHHHHh
Confidence 4666777643 33 456899999973333211 0133999999999998887754
Q ss_pred --cCCcEEEEcCCCccCCCCCCCC----CccHHH---HHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPIL----NFGAEV---ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
.|++++++||+.+.++...... ...... +......... .....+..++|+|+++..+++.+.....|..+
T Consensus 169 ~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g 247 (277)
T PRK06180 169 APFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREA-KSGKQPGDPAKAAQAILAAVESDEPPLHLLLG 247 (277)
T ss_pred hhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHh-hccCCCCCHHHHHHHHHHHHcCCCCCeeEecc
Confidence 4899999999999876432111 011111 1111000000 01233678999999999999887666667555
Q ss_pred cC
Q 027969 148 GS 149 (216)
Q Consensus 148 ~~ 149 (216)
++
T Consensus 248 ~~ 249 (277)
T PRK06180 248 SD 249 (277)
T ss_pred HH
Confidence 33
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.7e-06 Score=62.56 Aligned_cols=124 Identities=21% Similarity=0.191 Sum_probs=79.4
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 83 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 83 (216)
.+-.+++.+. ++++|+|+|-. -||-.. ... +.|-.+|.++|..+.... +++-++
T Consensus 143 i~a~kaa~~~-gv~~fvyISa~--d~~~~~--------------~i~------rGY~~gKR~AE~Ell~~~---~~rgii 196 (283)
T KOG4288|consen 143 INAVKAAAKA-GVPRFVYISAH--DFGLPP--------------LIP------RGYIEGKREAEAELLKKF---RFRGII 196 (283)
T ss_pred HHHHHHHHHc-CCceEEEEEhh--hcCCCC--------------ccc------hhhhccchHHHHHHHHhc---CCCcee
Confidence 4567788888 99999999984 332211 001 239999999998887654 688899
Q ss_pred EcCCCccCCCCCCCCCcc----H---HHHHHHHc---CC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCC
Q 027969 84 IHPGTVIGPFFQPILNFG----A---EVILNLIN---GD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVA 151 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~----~---~~~~~~~~---~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~ 151 (216)
+|||.+||...-...... . .++.+... .+ +.++ -....+.++++|.+.+.++..+.-.| .+
T Consensus 197 lRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G-------vv 269 (283)
T KOG4288|consen 197 LRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG-------VV 269 (283)
T ss_pred eccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc-------ee
Confidence 999999998432211111 1 12222221 11 2223 44569999999999999999876554 34
Q ss_pred CHHHHHHHH
Q 027969 152 QHSDILKFL 160 (216)
Q Consensus 152 s~~el~~~i 160 (216)
++.++.+.-
T Consensus 270 ~i~eI~~~a 278 (283)
T KOG4288|consen 270 TIEEIKKAA 278 (283)
T ss_pred eHHHHHHHH
Confidence 556655543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.9e-06 Score=62.46 Aligned_cols=135 Identities=21% Similarity=0.135 Sum_probs=83.4
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++.+. .+..+||++||. ..+.... +.+.|+.+|...|.+++.+.++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~g~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~~~~ 178 (276)
T PRK05875 121 GTMYVLKHAARELVRGGGGSFVGISSI-AASNTHR---------------------WFGAYGVTKSAVDHLMKLAADELG 178 (276)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEech-hhcCCCC---------------------CCcchHHHHHHHHHHHHHHHHHhc
Confidence 344566555432 133589999997 5442210 01349999999999999987654
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCC--c-eEEEe-cCCC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS--G-RYLLA-GSVA 151 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~-~~~~~-~~~~ 151 (216)
+++++++||+.+.++-..... ............. ....+++++|+|+++.+++..+... | .+++. +..+
T Consensus 179 ~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~ 253 (276)
T PRK05875 179 PSWVRVNSIRPGLIRTDLVAPIT-ESPELSADYRACT----PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML 253 (276)
T ss_pred ccCeEEEEEecCccCCccccccc-cCHHHHHHHHcCC----CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence 689999999999766432211 1111112222221 1223678999999999999865432 4 56665 4444
Q ss_pred ----CHHHHHHHHHHh
Q 027969 152 ----QHSDILKFLREH 163 (216)
Q Consensus 152 ----s~~el~~~i~~~ 163 (216)
++.|+++.+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 254 RRGPDFSSMLEPVFGA 269 (276)
T ss_pred cCCccHHHHHHHHhhH
Confidence 777777776654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.5e-06 Score=63.34 Aligned_cols=121 Identities=21% Similarity=0.158 Sum_probs=76.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +.++||++||. ..++... . ....|+.+|...|.+++.+...
T Consensus 117 ~~~~l~~~~~~~~~~~-~~~~ii~~ss~-~~~~~~~--------------~------~~~~y~~sK~a~~~~~~~~~~~~ 174 (251)
T PRK12826 117 GTFLLTQAALPALIRA-GGGRIVLTSSV-AGPRVGY--------------P------GLAHYAASKAGLVGFTRALALEL 174 (251)
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEEech-HhhccCC--------------C------CccHHHHHHHHHHHHHHHHHHHH
Confidence 4456666663 34 56789999997 4431110 0 0123999999999999887654
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGSV 150 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~~ 150 (216)
.+++++++||+.++|+...... ...+...+..+. + ...+++++|+|.++..++..... .| .+++.++.
T Consensus 175 ~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~---~-~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 175 AARNITVNSVHPGGVDTPMAGNLG--DAQWAEAIAAAI---P-LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred HHcCeEEEEEeeCCCCcchhhhcC--chHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 4899999999999998754321 111111121221 1 12589999999999998865422 24 66665543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.1e-06 Score=62.39 Aligned_cols=119 Identities=16% Similarity=0.068 Sum_probs=74.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++... .+..+||++||.++.++... ...|+.||...+.+++.+..+.
T Consensus 118 ~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~~~~ 175 (247)
T PRK12935 118 SVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG----------------------QTNYSAAKAGMLGFTKSLALELA 175 (247)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC----------------------CcchHHHHHHHHHHHHHHHHHHH
Confidence 455666666531 13468999999744442210 0239999999998887776543
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCceEEEecC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASGRYLLAGS 149 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~ 149 (216)
++++++++|+.+.++.... ...........+. ....+.|++|+++++..++.... .+..|++.++
T Consensus 176 ~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 176 KTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAKI----PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred HcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHhC----CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 8999999999997653221 1111122222221 33468999999999999986542 2336766654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.2e-06 Score=63.00 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=75.2
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--C
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--G 78 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~ 78 (216)
|+.++++++.+. ....+||++||. ..+.... +.+.|+.+|...|.+++.++++. +
T Consensus 118 ~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~ 175 (252)
T PRK06077 118 SVIYCSQELAKEMREGGAIVNIASV-AGIRPAY---------------------GLSIYGAMKAAVINLTKYLALELAPK 175 (252)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEcch-hccCCCC---------------------CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455666666542 122589999997 5553211 11349999999999999988764 6
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
+.+.+++|+.+.++.................. .+.....+++++|+|++++.++..+...| .|++.+
T Consensus 176 i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 176 IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE---KFTLMGKILDPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred CEEEEEeeCCccChHHHhhhhcccccHHHHHH---hcCcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence 89999999999776421100000000000000 01122368999999999999997654444 676653
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-05 Score=60.51 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=70.7
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.+. ....+||++||.+..++... . ..|+.+|...|.+++.++..
T Consensus 111 ~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~--------~~y~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 111 GAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------H--------LAYCASKAALDAITRVLCVEL 168 (245)
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------C--------cHhHHHHHHHHHHHHHHHHHH
Confidence 455666666542 12368999999744442211 0 23999999999999988764
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.+++++.+||+.++++.....+. .......+... . ....+++++|+++++..++..+
T Consensus 169 ~~~~i~v~~v~pg~v~~~~~~~~~~-~~~~~~~~~~~---~-~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 169 GPHGIRVNSVNPTVTLTPMAAEAWS-DPQKSGPMLAA---I-PLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred hhhCeEEEEEeeCCCCCchhhhhcc-CHHHHHHHHhc---C-CCCCCCCHHHHHHHHHHHcCcc
Confidence 37999999999999876432111 11111111111 1 2335899999999999999754
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.4e-06 Score=67.91 Aligned_cols=132 Identities=14% Similarity=0.010 Sum_probs=80.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+|+++|.+. ++++||++||. +.+... ..+.. ... ...|...|..+|+.+.. .|+++
T Consensus 187 Gt~nLl~Aa~~a-gVgRIV~VSSi-ga~~~g--------~p~~~-~~s------k~~~~~~KraaE~~L~~----sGIrv 245 (576)
T PLN03209 187 ATKNLVDAATVA-KVNHFILVTSL-GTNKVG--------FPAAI-LNL------FWGVLCWKRKAEEALIA----SGLPY 245 (576)
T ss_pred HHHHHHHHHHHh-CCCEEEEEccc-hhcccC--------ccccc-hhh------HHHHHHHHHHHHHHHHH----cCCCE
Confidence 689999999988 88999999998 443111 01110 111 12388889999988753 49999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC-CCc-eEEEe-cCC---CCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG-RYLLA-GSV---AQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~-~~~---~s~~e 155 (216)
++|||+.+.++.+.... . ..+. ...+. .. ....+.-.|+|++++.++.++. ..+ +|-+. +.. .++.+
T Consensus 246 TIVRPG~L~tp~d~~~~-t--~~v~-~~~~d--~~-~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~ 318 (576)
T PLN03209 246 TIVRPGGMERPTDAYKE-T--HNLT-LSEED--TL-FGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEE 318 (576)
T ss_pred EEEECCeecCCcccccc-c--ccee-ecccc--cc-CCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHH
Confidence 99999999887543110 0 0000 00000 01 1125788999999999998654 334 56443 432 45555
Q ss_pred HHHHHH
Q 027969 156 ILKFLR 161 (216)
Q Consensus 156 l~~~i~ 161 (216)
++..+-
T Consensus 319 ~~~~ip 324 (576)
T PLN03209 319 LLAKIP 324 (576)
T ss_pred HHHhcc
Confidence 554433
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.3e-06 Score=61.30 Aligned_cols=111 Identities=14% Similarity=0.001 Sum_probs=69.8
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.+++.+++. +..+||++||.++.++.. ....++.+.... ..|+.||...|.+.+.++++ .+++
T Consensus 126 ~~~~~~~~~~-~~~~iv~~sS~~~~~~~~------~~~~~~~~~~~~------~~Y~~sK~a~~~l~~~la~e~~~~~i~ 192 (256)
T PRK09186 126 QQFAKYFKKQ-GGGNLVNISSIYGVVAPK------FEIYEGTSMTSP------VEYAAIKAGIIHLTKYLAKYFKDSNIR 192 (256)
T ss_pred HHHHHHHHhc-CCceEEEEechhhhcccc------chhccccccCCc------chhHHHHHHHHHHHHHHHHHhCcCCeE
Confidence 4555555555 557999999974444321 112222221111 24999999999998877764 4799
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++|+.++++.. ..+........ ....+++.+|+|+++..++...
T Consensus 193 v~~i~Pg~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 239 (256)
T PRK09186 193 VNCVSPGGILDNQP-------EAFLNAYKKCC----NGKGMLDPDDICGTLVFLLSDQ 239 (256)
T ss_pred EEEEecccccCCCC-------HHHHHHHHhcC----CccCCCCHHHhhhhHhheeccc
Confidence 99999998876431 11222221111 1234789999999999999754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.4e-05 Score=59.73 Aligned_cols=117 Identities=24% Similarity=0.182 Sum_probs=75.1
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. ++++||++||.+..++... ...|+.+|...|.+++.++++
T Consensus 116 ~~~~l~~~~~~~l~~~-~~~~ii~~ss~~~~~~~~~----------------------~~~y~~sk~~~~~~~~~l~~~~ 172 (246)
T PRK05653 116 GTFNVVRAALPPMIKA-RYGRIVNISSVSGVTGNPG----------------------QTNYSAAKAGVIGFTKALALEL 172 (246)
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECcHHhccCCCC----------------------CcHhHhHHHHHHHHHHHHHHHH
Confidence 3456666663 44 6689999999744432110 123999999999999887664
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
.+++++++||+.++++.... ....+....... + ....+++.+|+++++..++..... .+ .|.+.+
T Consensus 173 ~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~--~-~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 173 ASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKE--I-PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG 242 (246)
T ss_pred hhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhc--C-CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 38999999999999987532 111121111111 1 234578899999999999975322 34 455554
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-05 Score=60.31 Aligned_cols=107 Identities=20% Similarity=0.238 Sum_probs=69.5
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ 82 (216)
++.++++. +.++||++||.+..++... ...|+.+|...+.+++.++.+. +++++
T Consensus 123 ~~~~~~~~-~~~~ii~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~ 179 (252)
T PRK06138 123 AIPIMQRQ-GGGSIVNTASQLALAGGRG----------------------RAAYVASKGAIASLTRAMALDHATDGIRVN 179 (252)
T ss_pred HHHHHHhc-CCeEEEEECChhhccCCCC----------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence 34444555 5679999999845553321 1239999999999999987654 89999
Q ss_pred EEcCCCccCCCCCCCCC--ccHHHHHHHHcCCCCCCCCC-ceeehhhhHHHHHHhhcCCC
Q 027969 83 AIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPY-IFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~ 139 (216)
++||+.++++....... .....+.....+. ... .+++.+|+++++..++..+.
T Consensus 180 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 180 AVAPGTIDTPYFRRIFARHADPEALREALRAR----HPMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred EEEECCccCcchhhhhccccChHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999998875322100 0011111111111 122 37899999999999997754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.4e-05 Score=59.98 Aligned_cols=120 Identities=21% Similarity=0.146 Sum_probs=73.5
Q ss_pred cHHHHHHHHhcc----C--CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV----H--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75 (216)
Q Consensus 2 gt~~ll~~~~~~----~--~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 75 (216)
|+.++++++.+. . .-.++|++||.+++++... . . ..|+.+|...|.+++.+++
T Consensus 115 ~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~--------~--------~~Y~~sKaa~~~~~~~la~ 173 (248)
T PRK06123 115 GSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-----E--------Y--------IDYAASKGAIDTMTIGLAK 173 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-----C--------c--------cchHHHHHHHHHHHHHHHH
Confidence 455666666542 0 1136999999755664321 0 0 1299999999999988876
Q ss_pred Hc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 76 EN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 76 ~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
+. +++++++||+.|+++..... .....+....... .+ .. +.+++|+++++..++.... ..| .|++.+
T Consensus 174 ~~~~~~i~v~~i~pg~v~~~~~~~~--~~~~~~~~~~~~~-p~-~~--~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 174 EVAAEGIRVNAVRPGVIYTEIHASG--GEPGRVDRVKAGI-PM-GR--GGTAEEVARAILWLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred HhcccCeEEEEEecCcccCchhhcc--CCHHHHHHHHhcC-CC-CC--CcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence 53 89999999999999854321 1222222222211 11 11 2468999999999887532 233 555543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.1e-05 Score=59.12 Aligned_cols=121 Identities=20% Similarity=0.167 Sum_probs=73.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++.+. .+.++||++||.++..+.. + ...|+.+|...|.+++.+..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------------~------~~~y~~sK~a~~~~~~~~~~~~~ 173 (250)
T PRK08063 116 ALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE----------------N------YTTVGVSKAALEALTRYLAVELA 173 (250)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC----------------C------ccHHHHHHHHHHHHHHHHHHHHh
Confidence 345566655542 1456999999973322111 0 023999999999999988764
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGS 149 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 149 (216)
.++++.+++|+.+..+..... ............. .+ ...+++.+|+|+++..++..+.. .| .+++.++
T Consensus 174 ~~~i~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 245 (250)
T PRK08063 174 PKGIAVNAVSGGAVDTDALKHF-PNREELLEDARAK---TP-AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG 245 (250)
T ss_pred HhCeEEEeEecCcccCchhhhc-cCchHHHHHHhcC---CC-CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 489999999999977653211 1111222221111 11 12378999999999999875432 34 4555543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.8e-06 Score=64.44 Aligned_cols=86 Identities=22% Similarity=0.215 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCC--------ccHHHHHHHHcCCCCCCCCCceeehhhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDV 127 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 127 (216)
|+.+|...|.+++.+++. .+++++++||+.++|+....... ....+.....+ .. ....+++++|+
T Consensus 160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~d~ 235 (264)
T PRK12829 160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE---KI-SLGRMVEPEDI 235 (264)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh---cC-CCCCCCCHHHH
Confidence 999999999999887764 38999999999999976432100 00000000000 01 12348999999
Q ss_pred HHHHHHhhcCC--CCCc-eEEEec
Q 027969 128 VYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 128 a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
+.++..++... ...| .|++.+
T Consensus 236 a~~~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 236 AATALFLASPAARYITGQAISVDG 259 (264)
T ss_pred HHHHHHHcCccccCccCcEEEeCC
Confidence 99999888642 2234 565554
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.1e-06 Score=64.99 Aligned_cols=124 Identities=16% Similarity=0.115 Sum_probs=75.1
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++... ..-.+||++||.+..++.. +...|+.||...+.+++.++++
T Consensus 114 ~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 171 (257)
T PRK07067 114 GLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA----------------------LVSHYCATKAAVISYTQSAALAL 171 (257)
T ss_pred hHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC----------------------CCchhhhhHHHHHHHHHHHHHHh
Confidence 566777777542 1114799999974444321 0123999999999999888763
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCC---CceEEE
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKA---SGRYLL 146 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~ 146 (216)
.++++.+++|+.++++............ .....+. ..+. ....+++.+|+|+++..++..... +..+++
T Consensus 172 ~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v 250 (257)
T PRK07067 172 IRHGINVNAIAPGVVDTPMWDQVDALFARY-ENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNV 250 (257)
T ss_pred cccCeEEEEEeeCcccchhhhhhhhhhhhc-cCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEee
Confidence 5899999999999987532210000000 0000000 0011 234689999999999999975422 336666
Q ss_pred ec
Q 027969 147 AG 148 (216)
Q Consensus 147 ~~ 148 (216)
.+
T Consensus 251 ~g 252 (257)
T PRK07067 251 DG 252 (257)
T ss_pred cC
Confidence 54
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.8e-05 Score=58.66 Aligned_cols=121 Identities=19% Similarity=0.160 Sum_probs=75.0
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++.+. ....++|++||. ..+.... ..+.|+.||...|.+++.+.++ .
T Consensus 124 ~~~~l~~~~~~~~~~~~~~v~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~ 181 (254)
T PRK12746 124 APFFLIQQTLPLLRAEGRVINISSA-EVRLGFT---------------------GSIAYGLSKGALNTMTLPLAKHLGER 181 (254)
T ss_pred HHHHHHHHHHHHhhcCCEEEEECCH-HhcCCCC---------------------CCcchHhhHHHHHHHHHHHHHHHhhc
Confidence 566777777652 133589999997 5553211 0123999999999998887764 4
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC---CceEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA---SGRYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~ 149 (216)
++++++++|+.+.++-..... .... +........ ....+++++|+++++..++..... +..|++.++
T Consensus 182 ~i~v~~v~pg~~~t~~~~~~~-~~~~-~~~~~~~~~---~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 182 GITVNTIMPGYTKTDINAKLL-DDPE-IRNFATNSS---VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred CcEEEEEEECCccCcchhhhc-cChh-HHHHHHhcC---CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 799999999999887532110 0011 111111110 122467899999999988875422 335666543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.1e-05 Score=58.62 Aligned_cols=109 Identities=19% Similarity=0.121 Sum_probs=71.8
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. ++++||++||. ..+.... ....|+.+|...+.++..+++.
T Consensus 116 ~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~~~~~~---------------------~~~~y~~sk~a~~~~~~~~a~~~ 172 (239)
T PRK12828 116 TTLNASKAALPALTAS-GGGRIVNIGAG-AALKAGP---------------------GMGAYAAAKAGVARLTEALAAEL 172 (239)
T ss_pred hHHHHHHHHHHHHHhc-CCCEEEEECch-HhccCCC---------------------CcchhHHHHHHHHHHHHHHHHHh
Confidence 4556666654 34 57899999997 5443210 0123999999999888776653
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
.++++.++||+.++++...... ..+ ....+++++|+|+++..++.+... .| .+.+.+
T Consensus 173 ~~~~i~~~~i~pg~v~~~~~~~~~----------~~~-----~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g 234 (239)
T PRK12828 173 LDRGITVNAVLPSIIDTPPNRADM----------PDA-----DFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG 234 (239)
T ss_pred hhcCeEEEEEecCcccCcchhhcC----------Cch-----hhhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence 4899999999999987321100 000 223479999999999999976432 34 445543
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.2e-05 Score=57.53 Aligned_cols=116 Identities=23% Similarity=0.239 Sum_probs=75.7
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++.+. .+.++||++||. ..|... +.|+.||...|.+++.+.++.
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~------------------------~~Y~~sK~a~~~~~~~l~~~~~ 174 (250)
T PRK07774 120 GALVCTRAVYKHMAKRGGGAIVNQSST-AAWLYS------------------------NFYGLAKVGLNGLTQQLARELG 174 (250)
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecc-cccCCc------------------------cccHHHHHHHHHHHHHHHHHhC
Confidence 456666666542 134689999997 555210 239999999999999988764
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
++.+++++|+.+..+..... ....+...+.++.+ ..-+.+++|+++++..++.... ..| .|++.+
T Consensus 175 ~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~ 244 (250)
T PRK07774 175 GMNIRVNAIAPGPIDTEATRTV--TPKEFVADMVKGIP----LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG 244 (250)
T ss_pred ccCeEEEEEecCcccCcccccc--CCHHHHHHHHhcCC----CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence 79999999999877664321 12233333333321 1125678999999999987642 233 566653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3e-05 Score=58.69 Aligned_cols=109 Identities=17% Similarity=0.087 Sum_probs=67.5
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---ENGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.++.++... . ..|+.||.+.+.+++.+++ ..|+++.++||+.++++.
T Consensus 134 ~~iv~~ss~~~~~~~~~--------------~--------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 134 GRIIQINSKSGKVGSKH--------------N--------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred cEEEEecCcccccCCCC--------------C--------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 48999999744443211 1 2399999999998888775 358999999999998765
Q ss_pred CCCCCCccHHHHHHHHcCC----CCC--C-CCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecC
Q 027969 94 FQPILNFGAEVILNLINGD----QSF--A-FPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGS 149 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~----~~~--~-~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 149 (216)
.... ....+........ ..+ . ....+++++|++.++..++..... .| .|+++++
T Consensus 192 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g 255 (259)
T PRK12384 192 MFQS--LLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255 (259)
T ss_pred hhhh--hhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence 4321 1111111110000 000 0 234588999999999988865422 23 5666643
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.3e-05 Score=57.94 Aligned_cols=104 Identities=20% Similarity=0.168 Sum_probs=69.9
Q ss_pred cHHHHHHHHh-----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA-----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~-----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++. +. +.+++|++||.+.+++... ...|+.+|...+.+++.++.+
T Consensus 121 ~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~----------------------~~~y~~sK~a~~~~~~~l~~~ 177 (249)
T PRK12827 121 GFFNVTQAALPPMIRAR-RGGRIVNIASVAGVRGNRG----------------------QVNYAASKAGLIGLTKTLANE 177 (249)
T ss_pred HHHHHHHHHHHHHHhcC-CCeEEEEECCchhcCCCCC----------------------CchhHHHHHHHHHHHHHHHHH
Confidence 5677788776 34 5678999999744443211 023999999999988887654
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++++++||+.+.++..... .. .....+.. + ...+.+.+|+++++..++..
T Consensus 178 ~~~~~i~~~~i~pg~v~t~~~~~~---~~--~~~~~~~~---~-~~~~~~~~~va~~~~~l~~~ 232 (249)
T PRK12827 178 LAPRGITVNAVAPGAINTPMADNA---AP--TEHLLNPV---P-VQRLGEPDEVAALVAFLVSD 232 (249)
T ss_pred hhhhCcEEEEEEECCcCCCccccc---ch--HHHHHhhC---C-CcCCcCHHHHHHHHHHHcCc
Confidence 389999999999999764321 11 01121111 1 12255789999999998865
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.6e-05 Score=59.56 Aligned_cols=122 Identities=20% Similarity=0.164 Sum_probs=72.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---ENGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~ 79 (216)
++.++..+++. +..++|++||.++..+. + ...+|+.||...+.+.+.++. ..|+
T Consensus 113 ~~~~l~~~~~~-~~g~iv~isS~~~~~~~--------~--------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi 169 (273)
T PRK06182 113 TQLVLPHMRAQ-RSGRIINISSMGGKIYT--------P--------------LGAWYHATKFALEGFSDALRLEVAPFGI 169 (273)
T ss_pred HHHHHHHHHhc-CCCEEEEEcchhhcCCC--------C--------------CccHhHHHHHHHHHHHHHHHHHhcccCC
Confidence 45566666666 56789999997221111 0 012499999999998776653 3489
Q ss_pred cEEEEcCCCccCCCCCCCC---------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 80 DLVAIHPGTVIGPFFQPIL---------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
++.++||+.+..+...... ......................+.+.+|+|+++..++........|+++
T Consensus 170 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g 246 (273)
T PRK06182 170 DVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVG 246 (273)
T ss_pred EEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecC
Confidence 9999999999876431100 0000000000000000001234779999999999999865545567654
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.17 E-value=7e-05 Score=56.05 Aligned_cols=118 Identities=17% Similarity=0.176 Sum_probs=73.2
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++.+. .+.++||++||.+++++... . ..|+.+|...|.+++.+++.
T Consensus 117 ~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~--------------~--------~~y~~sk~a~~~~~~~~a~~~~ 174 (248)
T PRK05557 117 GVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG--------------Q--------ANYAASKAGVIGFTKSLARELA 174 (248)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC--------------C--------chhHHHHHHHHHHHHHHHHHhh
Confidence 345566666532 15568999999756665321 1 23999999999888876653
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCc-eEEEec
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG-RYLLAG 148 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~~~~ 148 (216)
.++.++++||+.+.++...+ ............. ....+.+++|+++++..++.. ....| .+++.+
T Consensus 175 ~~~i~~~~v~pg~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 175 SRGITVNAVAPGFIETDMTDA---LPEDVKEAILAQI----PLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred hhCeEEEEEecCccCCccccc---cChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 38999999999886544321 1222222222221 123467999999999988865 22234 455543
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.4e-05 Score=55.68 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=73.8
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+.++||++||.+++++... . ..|+.+|...+.+++.+++.
T Consensus 110 ~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~--------------~--------~~y~~~k~a~~~~~~~l~~~~~ 167 (239)
T TIGR01830 110 GVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG--------------Q--------ANYAASKAGVIGFTKSLAKELA 167 (239)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC--------------C--------chhHHHHHHHHHHHHHHHHHHh
Confidence 456677776542 24568999999756665321 0 23999999999888887654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
.++.+.++||+.+.++.... ............. ...-+.+++|+++++..++.... ..| .|++.+
T Consensus 168 ~~g~~~~~i~pg~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~ 236 (239)
T TIGR01830 168 SRNITVNAVAPGFIDTDMTDK---LSEKVKKKILSQI----PLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG 236 (239)
T ss_pred hcCeEEEEEEECCCCChhhhh---cChHHHHHHHhcC----CcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence 48999999999886653221 1112222222211 11236689999999998885432 233 566654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.7e-05 Score=57.05 Aligned_cols=95 Identities=16% Similarity=0.056 Sum_probs=61.8
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||.+++++... + . ..|+.+|...|.+++.++.+ .+++++++||+.++++.
T Consensus 135 g~~v~~sS~~~~~~~~~---------~------~------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 135 GAIVNVSSAASRLGAPG---------E------Y------VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred cEEEEECchhhccCCCC---------c------c------cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 46999999745553211 0 0 12999999999988877653 38999999999999986
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.... .............+ + . -..+.+|+++++..++...
T Consensus 194 ~~~~--~~~~~~~~~~~~~~-~-~--~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 194 HASG--GEPGRVDRVKSNIP-M-Q--RGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred cccC--CCHHHHHHHHhcCC-C-C--CCcCHHHHHHHHHhhcChh
Confidence 4321 22233333322211 1 1 1237899999999988643
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.1e-05 Score=56.85 Aligned_cols=105 Identities=22% Similarity=0.270 Sum_probs=67.4
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
+.+||++||....++... .+.|+.+|...|.+++.++.+ .+++++++||+.+.++
T Consensus 139 ~~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 196 (256)
T PRK12745 139 HRSIVFVSSVNAIMVSPN----------------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD 196 (256)
T ss_pred CcEEEEECChhhccCCCC----------------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence 567999999744443211 123999999999999998764 5899999999999886
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
..... ...+......+. .+ ...+.+.+|+++++..++.... ..| .|++.+
T Consensus 197 ~~~~~---~~~~~~~~~~~~--~~-~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g 249 (256)
T PRK12745 197 MTAPV---TAKYDALIAKGL--VP-MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG 249 (256)
T ss_pred ccccc---chhHHhhhhhcC--CC-cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence 54321 111111111111 11 2347799999999998886432 234 565554
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00012 Score=54.45 Aligned_cols=105 Identities=21% Similarity=0.159 Sum_probs=66.0
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
++..+++. +..++|++||. ..|+... ...|+.+|...|.+++.++.+ .|+.++
T Consensus 110 ~~~~~~~~-~~~~iv~~sS~-~~~~~~~----------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~ 165 (234)
T PRK07577 110 FLEGMKLR-EQGRIVNICSR-AIFGALD----------------------RTSYSAAKSALVGCTRTWALELAEYGITVN 165 (234)
T ss_pred HHHHHHHc-CCcEEEEEccc-cccCCCC----------------------chHHHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence 34444555 56799999997 6654311 123999999999988877643 489999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++||+.+..+.................... + ...+...+|+|.++..++..+
T Consensus 166 ~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 166 AVAPGPIETELFRQTRPVGSEEEKRVLASI---P-MRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred EEecCcccCcccccccccchhHHHHHhhcC---C-CCCCcCHHHHHHHHHHHhCcc
Confidence 999999987653211111111111222211 1 112457899999999999754
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.5e-06 Score=48.38 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=27.2
Q ss_pred cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 175 EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 175 ~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
..+......|++|+ ++|||+| +++++++++..+|.+++.
T Consensus 19 ~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np 59 (62)
T PF13950_consen 19 PGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP 59 (62)
T ss_dssp TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred CCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence 56677889999999 8999999 999999999999998875
|
... |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00011 Score=54.31 Aligned_cols=109 Identities=19% Similarity=0.160 Sum_probs=69.3
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-C-Cc
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-G-ID 80 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~-~~ 80 (216)
++++++++++. + +++|++||. ..+.... + ...|+.+|...|.+++.++... + ++
T Consensus 110 ~~~~~~~~~~~-~-~~~v~~ss~-~~~~~~~---------------~------~~~y~~~K~a~~~~~~~~~~~~~~~i~ 165 (227)
T PRK08219 110 TRLLLPALRAA-H-GHVVFINSG-AGLRANP---------------G------WGSYAASKFALRALADALREEEPGNVR 165 (227)
T ss_pred HHHHHHHHHhC-C-CeEEEEcch-HhcCcCC---------------C------CchHHHHHHHHHHHHHHHHHHhcCCce
Confidence 45566666554 3 589999997 4442211 0 0239999999999888876542 4 88
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
+..++|+.+.++... ....+. ... ....+++++|++++++.+++.+..+..+++.
T Consensus 166 ~~~i~pg~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 166 VTSVHPGRTDTDMQR-----------GLVAQE-GGEYDPERYLRPETVAKAVRFAVDAPPDAHITEVV 221 (227)
T ss_pred EEEEecCCccchHhh-----------hhhhhh-ccccCCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence 999998876543211 111111 011 2345899999999999999876544566544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.9e-05 Score=56.53 Aligned_cols=131 Identities=19% Similarity=0.190 Sum_probs=74.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK-- 75 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-- 75 (216)
|+.++++++. +.....++|++||. ..+.... +...|+.||...+.+.+.++.
T Consensus 117 g~~~l~~~~~p~m~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~l~~e~ 174 (275)
T PRK05876 117 GSIHTVEAFLPRLLEQGTGGHVVFTASF-AGLVPNA---------------------GLGAYGVAKYGVVGLAETLAREV 174 (275)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEeCCh-hhccCCC---------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 4556666653 33123589999997 4432110 013399999975554444443
Q ss_pred -HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHH--Hc-CC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 76 -ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNL--IN-GD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 76 -~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--~~-~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
..|+.+++++|+.+.++..... ..+... .. .. ...+ ...++++++|+|++++.++.++. .+++.
T Consensus 175 ~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~~---~~~~~ 246 (275)
T PRK05876 175 TADGIGVSVLCPMVVETNLVANS-----ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANR---LYVLP 246 (275)
T ss_pred hhcCcEEEEEEeCccccccccch-----hhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcCC---eEEec
Confidence 2389999999999977643211 000000 00 01 1111 33568999999999999997542 34443
Q ss_pred cCCCCHHHHHHHHHHh
Q 027969 148 GSVAQHSDILKFLREH 163 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~ 163 (216)
.......+.+.+.+.
T Consensus 247 -~~~~~~~~~~~~~~~ 261 (275)
T PRK05876 247 -HAASRASIRRRFERI 261 (275)
T ss_pred -ChhhHHHHHHHHHHH
Confidence 334445555544443
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00012 Score=54.92 Aligned_cols=120 Identities=16% Similarity=0.129 Sum_probs=72.5
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +.+++|++||. ..+.... . . ..|+.+|.+.+.+++.++++.
T Consensus 114 ~~~~l~~~~~~~~~~~-~~~~ii~iss~-~~~~~~~----~---------~--------~~Y~~sK~a~~~~~~~la~~~ 170 (250)
T TIGR03206 114 GALHMHHAVLPGMVER-GAGRIVNIASD-AARVGSS----G---------E--------AVYAACKGGLVAFSKTMAREH 170 (250)
T ss_pred HHHHHHHHHHHHHHhc-CCeEEEEECch-hhccCCC----C---------C--------chHHHHHHHHHHHHHHHHHHH
Confidence 3455555554 44 55789999997 4443211 0 0 239999999999988887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC---CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
+++++++||+.++++...... .....+...+.... + ...+...+|+|+++..++..... .| .+.+.+
T Consensus 171 ~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 171 ARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI---P-LGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246 (250)
T ss_pred hHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC---C-ccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence 899999999999887532110 01111222222221 1 11255689999999998865422 34 454443
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00013 Score=55.02 Aligned_cols=103 Identities=23% Similarity=0.248 Sum_probs=65.8
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHH---HHcCCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA---KENGIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~ 81 (216)
.+++++.+. +.+++|++||.+++.+.. ....|+.+|...|.+.+.+. ...++++
T Consensus 115 ~~~~~~~~~-~~~~iv~~ss~~~~~~~~----------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v 171 (256)
T PRK08017 115 LLLPAMLPH-GEGRIVMTSSVMGLISTP----------------------GRGAYAASKYALEAWSDALRMELRHSGIKV 171 (256)
T ss_pred HHHHHHhhc-CCCEEEEEcCcccccCCC----------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 356666666 667899999973322110 01239999999998876543 3458999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcC--C-CCC-C--CCCceeehhhhHHHHHHhhcCCCCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLING--D-QSF-A--FPYIFVEIRDVVYAHIRALEVPKAS 141 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~--~-~~~-~--~~~~~i~v~D~a~~~~~~~~~~~~~ 141 (216)
+++||+.+..+... ....+ . +.. + ....+++.+|+++++..+++.+...
T Consensus 172 ~~v~pg~~~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 172 SLIEPGPIRTRFTD-----------NVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred EEEeCCCcccchhh-----------cccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence 99999877543211 11111 1 111 1 2345799999999999999876543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=59.30 Aligned_cols=128 Identities=14% Similarity=0.174 Sum_probs=75.0
Q ss_pred HHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 3 TLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 3 t~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
+.++++++.+. .+..+||++||.+++++... . ..|+.||...|.+++.++.+ .
T Consensus 117 ~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~l~~e~~~~ 174 (258)
T PRK08628 117 YYVMAHYCLPHLKASRGAIVNISSKTALTGQGG--------------T--------SGYAAAKGAQLALTREWAVALAKD 174 (258)
T ss_pred HHHHHHHHHHHhhccCcEEEEECCHHhccCCCC--------------C--------chhHHHHHHHHHHHHHHHHHHhhc
Confidence 34455554321 12368999999845443211 1 23999999999999988753 4
Q ss_pred CCcEEEEcCCCccCCCCCCCCC---ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecCCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGSVA 151 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~~~ 151 (216)
++++..++|+.|+++....... ........+... .+....++..+|+|+++..++... ...| .+.+.+...
T Consensus 175 ~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~ 251 (258)
T PRK08628 175 GVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK---IPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYV 251 (258)
T ss_pred CeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc---CCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCcc
Confidence 8999999999999875321000 000111111111 111124788999999999999754 2334 455555444
Q ss_pred CHHH
Q 027969 152 QHSD 155 (216)
Q Consensus 152 s~~e 155 (216)
.+++
T Consensus 252 ~~~~ 255 (258)
T PRK08628 252 HLDR 255 (258)
T ss_pred cccc
Confidence 4443
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00027 Score=54.87 Aligned_cols=120 Identities=15% Similarity=0.084 Sum_probs=75.9
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++... ..-.+||++||. ..|.... .. ..|+.||...+.+++.++++ .
T Consensus 169 g~~~l~~~~~~~~~~~~~iv~~sS~-~~~~~~~-------------~~--------~~Y~asK~a~~~~~~~la~el~~~ 226 (300)
T PRK06128 169 AMFWLCKAAIPHLPPGASIINTGSI-QSYQPSP-------------TL--------LDYASTKAAIVAFTKALAKQVAEK 226 (300)
T ss_pred HHHHHHHHHHHhcCcCCEEEEECCc-cccCCCC-------------Cc--------hhHHHHHHHHHHHHHHHHHHhhhc
Confidence 566778877652 122489999997 5553211 00 23999999999999988765 4
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
|+++.+++|+.|.++..... ......+..+... .+ ...+.+.+|++.++..++..... .| .+++.+
T Consensus 227 gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~---~p-~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g 295 (300)
T PRK06128 227 GIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSE---TP-MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTG 295 (300)
T ss_pred CcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcC---CC-CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence 89999999999998753221 1112222222211 11 12366899999999998865322 23 565554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00026 Score=53.19 Aligned_cols=102 Identities=23% Similarity=0.155 Sum_probs=68.2
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||. ..++... . ..|+.+|...|.+++.++++ .+++++.++|+.+.++.
T Consensus 144 ~~iv~~ss~-~~~~~~~--------------~--------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 144 GVIINISSI-ARAGNMG--------------Q--------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred eEEEEEccc-cccCCCC--------------C--------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 468999986 6664321 0 23999999999998888754 48999999999998775
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
... ..+.......... ....+.+.+|+|+++..++......| .+++.+
T Consensus 201 ~~~---~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g 249 (253)
T PRK08217 201 TAA---MKPEALERLEKMI----PVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG 249 (253)
T ss_pred ccc---cCHHHHHHHHhcC----CcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence 432 2233333332221 12236789999999999997654445 555544
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=8e-05 Score=55.93 Aligned_cols=110 Identities=18% Similarity=0.158 Sum_probs=69.9
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ....++|++||.++.|+... .+.|+.+|...|.+++.++++.
T Consensus 114 ~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~ 171 (249)
T PRK06500 114 GPYFLIQALLPLLANPASIVLNGSINAHIGMPN----------------------SSVYAASKAALLSLAKTLSGELLPR 171 (249)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEechHhccCCCC----------------------ccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 567888888642 12246777777656664321 1349999999999998877543
Q ss_pred CCcEEEEcCCCccCCCCCCC---CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 GIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++++.++||+.++++..... ......+...+..+. + ..-+...+|+++++.+++..
T Consensus 172 gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~va~~~~~l~~~ 230 (249)
T PRK06500 172 GIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALV---P-LGRFGTPEEIAKAVLYLASD 230 (249)
T ss_pred CeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHcCc
Confidence 89999999999998743210 001122222232221 1 11245789999999998864
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00012 Score=55.82 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=66.6
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+.+. +..++|++||. ..+.... ....|+.+|...+.+.+.++.+ .|++
T Consensus 117 ~~~~~~~~~~-~~~~iv~vsS~-~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~ 173 (270)
T PRK05650 117 KAFLPLFKRQ-KSGRIVNIASM-AGLMQGP---------------------AMSSYNVAKAGVVALSETLLVELADDEIG 173 (270)
T ss_pred HHHHHHHHhC-CCCEEEEECCh-hhcCCCC---------------------CchHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 3345555555 56789999997 3332111 0123999999988888777765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++|+.+..+............. ...... ....+++++|+|+.++.+++++
T Consensus 174 v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 174 VHVVCPSFFQTNLLDSFRGPNPAMK-AQVGKL----LEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred EEEEecCccccCcccccccCchhHH-HHHHHH----hhcCCCCHHHHHHHHHHHHhCC
Confidence 9999999998765332111111111 111100 1123578999999999999864
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=9e-05 Score=63.94 Aligned_cols=121 Identities=20% Similarity=0.141 Sum_probs=73.8
Q ss_pred cHHHHHHHHh----ccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA----KVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++. +. +. .+||++||.+.+++... ...|+.+|...+.+++.++.+
T Consensus 532 g~~~l~~~~~~~l~~~-~~~g~iV~vsS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e 588 (681)
T PRK08324 532 GHFLVAREAVRIMKAQ-GLGGSIVFIASKNAVNPGPN----------------------FGAYGAAKAAELHLVRQLALE 588 (681)
T ss_pred HHHHHHHHHHHHHHhc-CCCcEEEEECCccccCCCCC----------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 3556655554 33 32 58999999744442210 134999999999999998765
Q ss_pred c---CCcEEEEcCCCcc-CCCCCCCCCccHHHHHHHHcCCC------CCC---CCCceeehhhhHHHHHHhhc--CCCCC
Q 027969 77 N---GIDLVAIHPGTVI-GPFFQPILNFGAEVILNLINGDQ------SFA---FPYIFVEIRDVVYAHIRALE--VPKAS 141 (216)
Q Consensus 77 ~---~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~i~v~D~a~~~~~~~~--~~~~~ 141 (216)
. |+++.+++|+.|| +.+..... . ........+.. .+. ....+++++|+|+++..++. .....
T Consensus 589 ~~~~gIrvn~v~Pg~v~~~t~~~~~~--~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~t 665 (681)
T PRK08324 589 LGPDGIRVNGVNPDAVVRGSGIWTGE--W-IEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTT 665 (681)
T ss_pred hcccCeEEEEEeCceeecCCccccch--h-hhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCc
Confidence 4 6999999999998 55432110 0 00011111111 011 23468999999999999884 33334
Q ss_pred c-eEEEec
Q 027969 142 G-RYLLAG 148 (216)
Q Consensus 142 ~-~~~~~~ 148 (216)
| .+++.+
T Consensus 666 G~~i~vdg 673 (681)
T PRK08324 666 GAIITVDG 673 (681)
T ss_pred CCEEEECC
Confidence 4 566654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00021 Score=53.62 Aligned_cols=108 Identities=15% Similarity=0.046 Sum_probs=66.9
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
..+++.+.+. +.++||++||. ..+.... ....|+.+|...+.+++.++.+. +++
T Consensus 122 ~~~~~~~~~~-~~~~iv~~sS~-~~~~~~~---------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~ 178 (251)
T PRK07231 122 QAAVPAMRGE-GGGAIVNVAST-AGLRPRP---------------------GLGWYNASKGAVITLTKALAAELGPDKIR 178 (251)
T ss_pred HHHHHHHHhc-CCcEEEEEcCh-hhcCCCC---------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 3344444445 56789999998 4442211 01239999999999888877643 899
Q ss_pred EEEEcCCCccCCCCCCCCC-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+.+++|+.+.++....... ........+..+. ....+++++|+|++++.++..+
T Consensus 179 v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 179 VNAVAPVVVETGLLEAFMGEPTPENRAKFLATI----PLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred EEEEEECccCCCcchhhhcccChHHHHHHhcCC----CCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999996654221100 0011111121111 2334789999999999999654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.7e-05 Score=58.01 Aligned_cols=122 Identities=17% Similarity=0.058 Sum_probs=71.2
Q ss_pred cHHHHHHH----HhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRS----CAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~----~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.+++++ +++. +.++||++||.+++.+.. . ...|+.+|...|.+++.++.+
T Consensus 107 g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------------~--------~~~Y~~sK~a~~~~~~~l~~el 163 (270)
T PRK06179 107 GILRMTRAVLPHMRAQ-GSGRIINISSVLGFLPAP--------------Y--------MALYAASKHAVEGYSESLDHEV 163 (270)
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEECCccccCCCC--------------C--------ccHHHHHHHHHHHHHHHHHHHH
Confidence 34445554 4555 668999999973322111 0 123999999999998887653
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCcc--HHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEE
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFG--AEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL 146 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 146 (216)
.|+++++++|+.+.++......... ........... .... ........+|+|++++.++..+.....|..
T Consensus 164 ~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 164 RQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWPKMRYTA 239 (270)
T ss_pred hhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence 4999999999999876533211000 00000000000 0000 112246689999999999987654456654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00014 Score=54.68 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=68.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||.+..++.. +.+.|+.+|...|.+++.++++
T Consensus 110 ~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 166 (252)
T PRK08220 110 GAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHVPRI----------------------GMAAYGASKAALTSLAKCVGLEL 166 (252)
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEECCchhccCCC----------------------CCchhHHHHHHHHHHHHHHHHHh
Confidence 3455666654 23 445899999972222110 0134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCcc--H-----HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFG--A-----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++++.+++|+.++++......... . ........+ . ....+++++|+|+++..++..
T Consensus 167 ~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dva~~~~~l~~~ 232 (252)
T PRK08220 167 APYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG---I-PLGKIARPQEIANAVLFLASD 232 (252)
T ss_pred hHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc---C-CCcccCCHHHHHHHHHHHhcc
Confidence 5899999999999987632210000 0 001111111 0 234589999999999998864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00019 Score=54.15 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=73.2
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK--- 75 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--- 75 (216)
|+.++++++.+. .+..++|++||. ...... +. ...|+.+|...|.+++.++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~~~-------------~~--------~~~y~~sK~a~~~~~~~~a~e~~ 178 (255)
T PRK07523 121 SVFYVGQAVARHMIARGAGKIINIASV-QSALAR-------------PG--------IAPYTATKGAVGNLTKGMATDWA 178 (255)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEEccc-hhccCC-------------CC--------CccHHHHHHHHHHHHHHHHHHhh
Confidence 455666666532 145789999997 322110 00 12399999999999998876
Q ss_pred HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 76 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 76 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
..|+++.++||+.+.++...... ....+...+... .+ ...+.+++|+|+++..++.... ..| .+++.+
T Consensus 179 ~~gi~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 249 (255)
T PRK07523 179 KHGLQCNAIAPGYFDTPLNAALV-ADPEFSAWLEKR---TP-AGRWGKVEELVGACVFLASDASSFVNGHVLYVDG 249 (255)
T ss_pred HhCeEEEEEEECcccCchhhhhc-cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 34899999999999887533211 111111112111 11 2236789999999999996532 234 455543
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.4e-05 Score=57.18 Aligned_cols=110 Identities=17% Similarity=0.156 Sum_probs=68.4
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+..+++++.+. ....+||++||. ..+.... + ...|+.+|...|.+++.++++
T Consensus 117 ~~~~l~~~~~~~~~~~~~~ii~~sS~-~~~~~~~---------------~------~~~Y~~sK~a~~~l~~~~a~~~~~ 174 (258)
T PRK07890 117 GTLRLTQAFTPALAESGGSIVMINSM-VLRHSQP---------------K------YGAYKMAKGALLAASQSLATELGP 174 (258)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEech-hhccCCC---------------C------cchhHHHHHHHHHHHHHHHHHHhh
Confidence 456677776542 122589999997 3331110 0 123999999999999998764
Q ss_pred cCCcEEEEcCCCccCCCCCCCCC--------ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++++.++||+.++++....... ..........+. . ....+.+++|+++++..++..
T Consensus 175 ~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 175 QGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---S-DLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred cCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---C-CccccCCHHHHHHHHHHHcCH
Confidence 38999999999999986322100 001111111111 1 122377899999999999874
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00037 Score=53.81 Aligned_cols=119 Identities=15% Similarity=0.112 Sum_probs=75.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++.+. ..-.++|++||. ..|.... . . ..|+.+|...+.+++.+++..
T Consensus 159 ~~~~l~~a~~~~~~~~g~iV~isS~-~~~~~~~----~---------~--------~~Y~~sK~a~~~l~~~la~~~~~~ 216 (290)
T PRK06701 159 SYFHMTKAALPHLKQGSAIINTGSI-TGYEGNE----T---------L--------IDYSATKGAIHAFTRSLAQSLVQK 216 (290)
T ss_pred HHHHHHHHHHHHHhhCCeEEEEecc-cccCCCC----C---------c--------chhHHHHHHHHHHHHHHHHHhhhc
Confidence 566777777652 122589999997 5553211 0 0 129999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
|+++.+++|+.++.+..... .....+...... . ....+.+++|+|+++..++.... ..| .+.+.+
T Consensus 217 gIrv~~i~pG~v~T~~~~~~--~~~~~~~~~~~~---~-~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg 284 (290)
T PRK06701 217 GIRVNAVAPGPIWTPLIPSD--FDEEKVSQFGSN---T-PMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNG 284 (290)
T ss_pred CeEEEEEecCCCCCcccccc--cCHHHHHHHHhc---C-CcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 89999999999988753321 111222222111 1 23347899999999999987542 234 444443
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00017 Score=54.08 Aligned_cols=109 Identities=22% Similarity=0.126 Sum_probs=68.8
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++.+. .+..+||++||.+..++... . ..|+.+|...|.+++.++++
T Consensus 118 ~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~--------~~y~~sK~~~~~~~~~l~~~~~ 175 (250)
T PRK12939 118 GTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK--------------L--------GAYVASKGAVIGMTRSLARELG 175 (250)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC--------------c--------chHHHHHHHHHHHHHHHHHHHh
Confidence 445666665432 13358999999733332210 0 23999999999999887654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++.+.+++|+.+..+...... ...+......+. ....+++++|+++++..++...
T Consensus 176 ~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 232 (250)
T PRK12939 176 GRGITVNAIAPGLTATEATAYVP--ADERHAYYLKGR----ALERLQVPDDVAGAVLFLLSDA 232 (250)
T ss_pred hhCEEEEEEEECCCCCccccccC--ChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCcc
Confidence 3799999999998766532211 012222222221 2334788999999999999753
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00019 Score=54.38 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=68.1
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++.+.+. .+..++|++||. ..+.... +...|+.+|...|.+.+.+...
T Consensus 113 ~~~~l~~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~~~~~~~~~l~~~~~~ 170 (263)
T PRK06181 113 GAVYCTHAALPHLKASRGQIVVVSSL-AGLTGVP---------------------TRSGYAASKHALHGFFDSLRIELAD 170 (263)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecc-cccCCCC---------------------CccHHHHHHHHHHHHHHHHHHHhhh
Confidence 566777776531 134689999997 4442111 0123999999999998876543
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCC--CCC-CCCceeehhhhHHHHHHhhcC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA-FPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++++.+++|+.+..+....... ..+.+ ..+ ....+++++|+|+++..+++.
T Consensus 171 ~~i~~~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 171 DGVAVTVVCPGFVATDIRKRALD---------GDGKPLGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred cCceEEEEecCccccCcchhhcc---------ccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence 48999999999997654321100 01111 112 334789999999999999975
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00024 Score=53.44 Aligned_cols=109 Identities=20% Similarity=0.151 Sum_probs=69.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---- 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---- 77 (216)
+++.++.++++. +.++||++||. ..+.... .. ..|+.+|...+.+++.++.+.
T Consensus 117 ~~~~~~~~~~~~-~~~~ii~~ss~-~~~~~~~-------------~~--------~~Y~~sK~a~~~~~~~la~e~~~~~ 173 (251)
T PRK07069 117 GCKHALPYLRAS-QPASIVNISSV-AAFKAEP-------------DY--------TAYNASKAAVASLTKSIALDCARRG 173 (251)
T ss_pred HHHHHHHHHhhc-CCcEEEEecCh-hhccCCC-------------CC--------chhHHHHHHHHHHHHHHHHHhcccC
Confidence 467788888776 56799999997 4442211 01 239999999999998876542
Q ss_pred -CCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++++..++|+.+.++....... ........+.++ .+ ...+.+.+|+++++..++..
T Consensus 174 ~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 174 LDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARG---VP-LGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred CcEEEEEEeecccCCcchhHHhhhccchhHHHHHhcc---CC-CCCCcCHHHHHHHHHHHcCc
Confidence 4888999999998876432110 001111111111 11 12356799999999998764
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00045 Score=51.98 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=65.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +..++|++||.+...+.. +.+.|+.+|...|.+.+.++.+. ++.
T Consensus 115 ~~~~~~~~~~-~~~~iv~isS~~~~~~~~----------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~ 171 (248)
T PRK10538 115 RAVLPGMVER-NHGHIINIGSTAGSWPYA----------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVR 171 (248)
T ss_pred HHHHHHHHhc-CCcEEEEECCcccCCCCC----------------------CCchhHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 4445555555 567899999973222110 01239999999999998887643 799
Q ss_pred EEEEcCCCccCCCCCCC-CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPI-LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+.+++|+.+.|+..... ............ ....++..+|+|+++..++..+
T Consensus 172 v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 172 VTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-------QNTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred EEEEeCCeecccccchhhccCcHHHHHhhc-------cccCCCCHHHHHHHHHHHhcCC
Confidence 99999999987653210 000000011110 1223578999999999998754
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00044 Score=52.21 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=59.5
Q ss_pred CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccC
Q 027969 15 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIG 91 (216)
Q Consensus 15 ~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 91 (216)
+..++|++||..++++... +...|+.+|...+.+.+.++.+ .+++++++||+.+.+
T Consensus 131 ~~g~iv~~sS~~~~~g~~~---------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t 189 (255)
T PRK06057 131 GKGSIINTASFVAVMGSAT---------------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNT 189 (255)
T ss_pred CCcEEEEEcchhhccCCCC---------------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCC
Confidence 3458999998745664321 0023999998777766654432 389999999999987
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 92 PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+..............+.. ...+ ...+..++|+++++..++..
T Consensus 190 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 190 PLLQELFAKDPERAARRL---VHVP-MGRFAEPEEIAAAVAFLASD 231 (255)
T ss_pred chhhhhccCCHHHHHHHH---hcCC-CCCCcCHHHHHHHHHHHhCc
Confidence 754321111111111110 1122 22578899999999888864
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.001 Score=50.15 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=65.5
Q ss_pred HHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEE
Q 027969 8 RSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAI 84 (216)
Q Consensus 8 ~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~il 84 (216)
+.+.+. +..+||++||.++..+... . ..|+.+|...+.+++.++.+ .++++.++
T Consensus 132 ~~~~~~-~~~~iv~~ss~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i 188 (256)
T PRK06124 132 QRMKRQ-GYGRIIAITSIAGQVARAG--------------D--------AVYPAAKQGLTGLMRALAAEFGPHGITSNAI 188 (256)
T ss_pred HHHHhc-CCcEEEEEeechhccCCCC--------------c--------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEE
Confidence 344334 5578999999733332110 0 23999999999988887654 38999999
Q ss_pred cCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 85 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 85 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+|+.+.++...... ....+...+... .+ ...+++.+|+++++..++...
T Consensus 189 ~pg~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 189 APGYFATETNAAMA-ADPAVGPWLAQR---TP-LGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred EECCccCcchhhhc-cChHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHcCcc
Confidence 99999887532211 111222122111 11 224788999999999999764
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0006 Score=50.55 Aligned_cols=120 Identities=16% Similarity=0.146 Sum_probs=72.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~ 80 (216)
|+.+++++.... +..++|++||. ..+.... +.+.|+.+|...+.+++.++.+. +++
T Consensus 103 ~~~~l~~~~~~~-~~g~iv~~ss~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~ir 159 (230)
T PRK07041 103 GAYRVARAARIA-PGGSLTFVSGF-AAVRPSA---------------------SGVLQGAINAALEALARGLALELAPVR 159 (230)
T ss_pred HHHHHHhhhhhc-CCeEEEEECch-hhcCCCC---------------------cchHHHHHHHHHHHHHHHHHHHhhCce
Confidence 345666644444 55789999997 4442211 11349999999999999887653 688
Q ss_pred EEEEcCCCccCCCCCCCCC-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
+..++|+.+-.+....... .....+...... ++ ...+...+|+|+++..++......| .|++.+
T Consensus 160 v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 225 (230)
T PRK07041 160 VNTVSPGLVDTPLWSKLAGDAREAMFAAAAER---LP-ARRVGQPEDVANAILFLAANGFTTGSTVLVDG 225 (230)
T ss_pred EEEEeecccccHHHHhhhccchHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence 9999999885543211000 011122222211 11 1124578999999999998654445 566553
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00076 Score=51.01 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=69.0
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.+. .+..+||++||.+.+++... . . . +...|+.+|...|.+++.++++.
T Consensus 123 ~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~----~--~------~------~~~~Y~~sKa~~~~~~~~~a~~~ 184 (259)
T PRK08213 123 GLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP----E--V------M------DTIAYNTSKGAVINFTRALAAEW 184 (259)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc----c--c------c------CcchHHHHHHHHHHHHHHHHHHh
Confidence 456677766432 24568999999744443321 0 0 0 11349999999999999987753
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++.+.+++|+.+-.+.... ....+......+. + ...+...+|+++++..++..
T Consensus 185 ~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~---~-~~~~~~~~~va~~~~~l~~~ 240 (259)
T PRK08213 185 GPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHT---P-LGRLGDDEDLKGAALLLASD 240 (259)
T ss_pred cccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCc
Confidence 7999999999886543221 2223333332221 1 11244689999998888864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0011 Score=49.52 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=64.1
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
+++.+++. +..+||++||. ..+.... .. ..|+.+|...+.+++.++.+ .++++.
T Consensus 122 ~~~~~~~~-~~~~iv~iss~-~~~~~~~-------------~~--------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~ 178 (245)
T PRK12824 122 LFAAMCEQ-GYGRIINISSV-NGLKGQF-------------GQ--------TNYSAAKAGMIGFTKALASEGARYGITVN 178 (245)
T ss_pred HHHHHHHh-CCeEEEEECCh-hhccCCC-------------CC--------hHHHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence 35555555 55789999997 4442111 01 12999999999888887653 389999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+++|+.+.++..... ............ ....+...+|+++++..++..
T Consensus 179 ~v~pg~~~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~ 226 (245)
T PRK12824 179 CIAPGYIATPMVEQM---GPEVLQSIVNQI----PMKRLGTPEEIAAAVAFLVSE 226 (245)
T ss_pred EEEEcccCCcchhhc---CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCc
Confidence 999999987653321 112222222221 122355689999999888854
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.001 Score=50.64 Aligned_cols=99 Identities=18% Similarity=0.095 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHI 132 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~ 132 (216)
+.|..+|..+|+.+.+. +++++++|+..+|...... ++....... +..+ +...++..+|++.++.
T Consensus 116 ~~~~~~~~~~e~~l~~s----g~~~t~lr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~ 184 (275)
T COG0702 116 SALARAKAAVEAALRSS----GIPYTTLRRAAFYLGAGAA-------FIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALA 184 (275)
T ss_pred cHHHHHHHHHHHHHHhc----CCCeEEEecCeeeeccchh-------HHHHHHhhCCceecCCCCceeeeEHHHHHHHHH
Confidence 34999999999999665 8999999977777655321 133333333 4333 5578999999999999
Q ss_pred HhhcCCCCCc-eEEEe-cCCCCHHHHHHHHHHhCCC
Q 027969 133 RALEVPKASG-RYLLA-GSVAQHSDILKFLREHYPT 166 (216)
Q Consensus 133 ~~~~~~~~~~-~~~~~-~~~~s~~el~~~i~~~~~~ 166 (216)
.++..+...+ .|.+. ++..+..++.+.+....+.
T Consensus 185 ~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr 220 (275)
T COG0702 185 AALDAPATAGRTYELAGPEALTLAELASGLDYTIGR 220 (275)
T ss_pred HHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence 9998765444 67665 5689999999999998754
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00027 Score=55.22 Aligned_cols=123 Identities=20% Similarity=0.175 Sum_probs=67.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
++.++..+.+. +..++|++||.+..++... .++.....+ ..+...|+.||...+.+.+.+.+. .|+
T Consensus 136 ~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~-------~~~~~~~~~---~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi 204 (315)
T PRK06196 136 VNLLWPALAAG-AGARVVALSSAGHRRSPIR-------WDDPHFTRG---YDKWLAYGQSKTANALFAVHLDKLGKDQGV 204 (315)
T ss_pred HHHHHHHHHhc-CCCeEEEECCHHhccCCCC-------ccccCccCC---CChHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34455555555 4468999999733332211 111110011 011235999999999998887654 489
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++||+.|.++-..... ............ ...+-...+...+|+|..++.++..+
T Consensus 205 ~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~~~~ 261 (315)
T PRK06196 205 RAFSVHPGGILTPLQRHLP-REEQVALGWVDE-HGNPIDPGFKTPAQGAATQVWAATSP 261 (315)
T ss_pred EEEEeeCCcccCCccccCC-hhhhhhhhhhhh-hhhhhhhhcCCHhHHHHHHHHHhcCC
Confidence 9999999999887542211 000000000000 00010002456899999999988654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00031 Score=52.97 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=62.2
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~ 81 (216)
.++..+.+. +.++||++||.++..+.. . ...|+.||...|.+++.+.+. .|+++
T Consensus 114 ~~~~~~~~~-~~~~iv~~SS~~~~~~~~--------------~--------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~ 170 (257)
T PRK09291 114 GFVRKMVAR-GKGKVVFTSSMAGLITGP--------------F--------TGAYCASKHALEAIAEAMHAELKPFGIQV 170 (257)
T ss_pred HHHHHHHhc-CCceEEEEcChhhccCCC--------------C--------cchhHHHHHHHHHHHHHHHHHHHhcCcEE
Confidence 445555555 557999999973332211 0 123999999999988876543 58999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-----CCCceeehhhhHHHHHHhhcCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-----FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++||+.+.-+... .....+....... ..+. ....++..+|+++.++.++..+
T Consensus 171 ~~v~pg~~~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 171 ATVNPGPYLTGFND----TMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred EEEecCcccccchh----hhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 99999987432111 0000011111011 1111 2234578888888888887654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0011 Score=50.02 Aligned_cols=108 Identities=16% Similarity=0.052 Sum_probs=69.2
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-- 77 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-- 77 (216)
|+.++++++.+. ....++|++||.+..++... . +.|+.+|...|.+++.++++.
T Consensus 120 ~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--------------~--------~~Y~~sKaa~~~~~~~la~~~~~ 177 (255)
T PRK05717 120 GPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--------------T--------EAYAASKGGLLALTHALAISLGP 177 (255)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------------C--------cchHHHHHHHHHHHHHHHHHhcC
Confidence 577888888631 12257999999744443211 0 239999999999999988765
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++++.+++|+.+.++..... ..... ....... .+ ...+.+.+|++.++..++..
T Consensus 178 ~i~v~~i~Pg~i~t~~~~~~--~~~~~-~~~~~~~--~~-~~~~~~~~~va~~~~~l~~~ 231 (255)
T PRK05717 178 EIRVNAVSPGWIDARDPSQR--RAEPL-SEADHAQ--HP-AGRVGTVEDVAAMVAWLLSR 231 (255)
T ss_pred CCEEEEEecccCcCCccccc--cchHH-HHHHhhc--CC-CCCCcCHHHHHHHHHHHcCc
Confidence 58999999999988753211 11111 1111111 11 12367899999999988864
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0018 Score=48.53 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=68.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +.+...++|++||. ..+.... .. ..|+.+|...+.+++.++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~~-------------~~--------~~Y~~sKaa~~~~~~~la~e~ 171 (248)
T TIGR01832 114 SVFFLTQAAAKHFLKQGRGGKIINIASM-LSFQGGI-------------RV--------PSYTASKHGVAGLTKLLANEW 171 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEecH-HhccCCC-------------CC--------chhHHHHHHHHHHHHHHHHHh
Confidence 3445555554 22114689999997 5553211 01 129999999999999988764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
|+++.+++|+.|..+...... ............ .+ ...++..+|+|+++..++..
T Consensus 172 ~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~s~ 229 (248)
T TIGR01832 172 AAKGINVNAIAPGYMATNNTQALR-ADEDRNAAILER---IP-AGRWGTPDDIGGPAVFLASS 229 (248)
T ss_pred CccCcEEEEEEECcCcCcchhccc-cChHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCc
Confidence 899999999999776432110 011111111111 12 23588999999999999964
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00068 Score=50.87 Aligned_cols=96 Identities=20% Similarity=0.162 Sum_probs=64.2
Q ss_pred HHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 3 TLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 3 t~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
+.++++++ .+. +..+||++||.+++++... + ...|+.||...+.++..+..+
T Consensus 116 ~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~---------------~------~~~Y~~sK~a~~~~~~~l~~~~~ 173 (248)
T PRK08251 116 ALAQCEAAMEIFREQ-GSGHLVLISSVSAVRGLPG---------------V------KAAYAASKAGVASLGEGLRAELA 173 (248)
T ss_pred HHHHHHHHHHHHHhc-CCCeEEEEeccccccCCCC---------------C------cccHHHHHHHHHHHHHHHHHHhc
Confidence 34444444 344 5578999999745553210 0 123999999999988887764
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++++++++|+.+.++..... + .....+..+|+|+++..++++.
T Consensus 174 ~~~i~v~~v~pg~v~t~~~~~~-------------~-----~~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 174 KTPIKVSTIEPGYIRSEMNAKA-------------K-----STPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred ccCcEEEEEecCcCcchhhhcc-------------c-----cCCccCCHHHHHHHHHHHHhcC
Confidence 378999999999966432110 0 1123577899999999999754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.002 Score=48.69 Aligned_cols=86 Identities=20% Similarity=0.133 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
.|+.||...|.+.+.++++. ++.+.+++|+.+...... ....+.....+. + .....+++|+|+++..++
T Consensus 158 ~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~---~-~~~~~~~~d~a~~~~~~~ 228 (258)
T PRK09134 158 SYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAAT---P-LGRGSTPEEIAAAVRYLL 228 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHh
Confidence 49999999999999987754 489999999998764321 111122222221 1 112467999999999999
Q ss_pred cCCCCCc-eEEEe-cCCCC
Q 027969 136 EVPKASG-RYLLA-GSVAQ 152 (216)
Q Consensus 136 ~~~~~~~-~~~~~-~~~~s 152 (216)
+.+...| .+++. +..++
T Consensus 229 ~~~~~~g~~~~i~gg~~~~ 247 (258)
T PRK09134 229 DAPSVTGQMIAVDGGQHLA 247 (258)
T ss_pred cCCCcCCCEEEECCCeecc
Confidence 8766666 45554 34343
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0013 Score=49.65 Aligned_cols=96 Identities=13% Similarity=0.097 Sum_probs=62.2
Q ss_pred CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccC
Q 027969 15 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIG 91 (216)
Q Consensus 15 ~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 91 (216)
+..+||++||....++... . ..|+.+|...|.+++.++.+ .|+++.+++|+.+..
T Consensus 136 ~~~~iv~isS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t 193 (254)
T PRK08085 136 QAGKIINICSMQSELGRDT--------------I--------TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKT 193 (254)
T ss_pred CCcEEEEEccchhccCCCC--------------C--------cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCC
Confidence 4468999999733332110 1 23999999999999998765 389999999999988
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 92 PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+-..... ....+....... .| ...+...+|++.++..++..
T Consensus 194 ~~~~~~~-~~~~~~~~~~~~---~p-~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 194 EMTKALV-EDEAFTAWLCKR---TP-AARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred cchhhhc-cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCc
Confidence 7543211 111121222111 12 12366889999999998864
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0013 Score=50.82 Aligned_cols=109 Identities=12% Similarity=0.046 Sum_probs=69.4
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+..+++++... .+ .+||++||. ..+.... .. ..|+.||...+.+++.++.+
T Consensus 163 g~~~l~~~~~~~m~~~-g~iv~iSS~-~~~~~~~-------------~~--------~~Y~asKaal~~l~~~la~el~~ 219 (294)
T PRK07985 163 ALFWLTQEAIPLLPKG-ASIITTSSI-QAYQPSP-------------HL--------LDYAATKAAILNYSRGLAKQVAE 219 (294)
T ss_pred HHHHHHHHHHHhhhcC-CEEEEECCc-hhccCCC-------------Cc--------chhHHHHHHHHHHHHHHHHHHhH
Confidence 566777777642 13 589999997 5442211 00 23999999999999888765
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+++.+++|+.|.++-.... ............. .+ ...+...+|+|.++..++...
T Consensus 220 ~gIrvn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~---~~-~~r~~~pedva~~~~fL~s~~ 276 (294)
T PRK07985 220 KGIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQ---TP-MKRAGQPAELAPVYVYLASQE 276 (294)
T ss_pred hCcEEEEEECCcCcccccccc-CCCHHHHHHHhcc---CC-CCCCCCHHHHHHHHHhhhChh
Confidence 489999999999998753211 0111112122111 11 112567899999999998653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0013 Score=49.25 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=65.1
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~ 81 (216)
.++..+.+. +..+||++||....++.. ....|+.+|...+.+.+.+.++ .++++
T Consensus 122 ~~~~~~~~~-~~~~iv~isS~~~~~~~~----------------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v 178 (246)
T PRK12938 122 QVIDGMVER-GWGRIINISSVNGQKGQF----------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTV 178 (246)
T ss_pred HHHHHHHHc-CCeEEEEEechhccCCCC----------------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 344444454 567899999973333211 0123999999998888777654 48999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++|+.+.++.... .....+..+.... ....+...+|++.++..++..
T Consensus 179 ~~i~pg~~~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~l~~~ 227 (246)
T PRK12938 179 NTVSPGYIGTDMVKA---IRPDVLEKIVATI----PVRRLGSPDEIGSIVAWLASE 227 (246)
T ss_pred EEEEecccCCchhhh---cChHHHHHHHhcC----CccCCcCHHHHHHHHHHHcCc
Confidence 999999998765321 1122233222221 122356789999999998864
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0013 Score=49.58 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=69.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..+||++||.+++++... . ..|+.+|...+.+.+.++++
T Consensus 123 ~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~e~~ 180 (255)
T PRK06841 123 GSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER--------------H--------VAYCASKAGVVGMTKVLALEWG 180 (255)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC--------------C--------chHHHHHHHHHHHHHHHHHHHH
Confidence 455666665431 14568999999855553321 1 23999999999998888765
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++.+..++|+.|-.+...... ........... .+ ...+.+.+|++++++.++...
T Consensus 181 ~~gi~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l~~~~ 237 (255)
T PRK06841 181 PYGITVNAISPTVVLTELGKKAW--AGEKGERAKKL---IP-AGRFAYPEEIAAAALFLASDA 237 (255)
T ss_pred hhCeEEEEEEeCcCcCccccccc--chhHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCcc
Confidence 3899999999999776432111 01111111111 11 224779999999999999653
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0018 Score=48.31 Aligned_cols=69 Identities=25% Similarity=0.278 Sum_probs=48.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||. ..+.... +...|+.+|...|.+.+.++.+
T Consensus 108 ~~~~l~~~~~~~~~~~-~~~~~v~~sS~-~~~~~~~---------------------~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 108 GPLAMARAFAPVLAAN-GGGAIVNVLSV-LSWVNFP---------------------NLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEcCh-hhccCCC---------------------CchHhHHHHHHHHHHHHHHHHHh
Confidence 3456666654 33 45789999997 4442111 0134999999999998887654
Q ss_pred --cCCcEEEEcCCCccCCC
Q 027969 77 --NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~ 93 (216)
.+++++++||+.+.++-
T Consensus 165 ~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 165 APQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred hhcCeEEEEEeCCcccccc
Confidence 38999999999997654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.001 Score=50.74 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=61.5
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
++..+.+. +..+||++||.++..+... ...|+.||...+.+.+....+ .|++++
T Consensus 120 ~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~ 176 (273)
T PRK07825 120 AAPRMVPR-GRGHVVNVASLAGKIPVPG----------------------MATYCASKHAVVGFTDAARLELRGTGVHVS 176 (273)
T ss_pred HHHHHHhC-CCCEEEEEcCccccCCCCC----------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 44444555 5678999999733322110 123999999888776665443 489999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
+++|+.+-.+-... . .+. ....++..+|+|+++..++.++.
T Consensus 177 ~v~Pg~v~t~~~~~-----------~-~~~----~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 177 VVLPSFVNTELIAG-----------T-GGA----KGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred EEeCCcCcchhhcc-----------c-ccc----cCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999884432110 0 000 23357899999999999998654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0022 Score=47.98 Aligned_cols=109 Identities=23% Similarity=0.157 Sum_probs=67.1
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++.+. ....++|++||. ..+.... ....|+.+|...+.+++.++.+ .
T Consensus 117 ~~~~~~~~~~~~~~~~~~iv~~ss~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~ 174 (245)
T PRK12937 117 GAFVVLREAARHLGQGGRIINLSTS-VIALPLP---------------------GYGPYAASKAAVEGLVHVLANELRGR 174 (245)
T ss_pred HHHHHHHHHHHHhccCcEEEEEeec-cccCCCC---------------------CCchhHHHHHHHHHHHHHHHHHhhhc
Confidence 456677766542 122489999986 3331110 0133999999999999887654 3
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++.+++++|+.+-.+-.... ........+.... ....+.+.+|+++++..++...
T Consensus 175 ~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~~~~ 229 (245)
T PRK12937 175 GITVNAVAPGPVATELFFNG--KSAEQIDQLAGLA----PLERLGTPEEIAAAVAFLAGPD 229 (245)
T ss_pred CeEEEEEEeCCccCchhccc--CCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCcc
Confidence 78999999998865532111 1222333333221 1123557899999999988653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0025 Score=47.90 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=67.4
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||. ..... . .+. ..|+.||...|.+++.++++.
T Consensus 121 ~~~~l~~~~~~~~~~~-~~g~iv~iss~-~~~~~---------~------~~~------~~Y~~sK~a~~~l~~~la~~~ 177 (253)
T PRK08642 121 GALNTIQAALPGMREQ-GFGRIINIGTN-LFQNP---------V------VPY------HDYTTAKAALLGLTRNLAAEL 177 (253)
T ss_pred HHHHHHHHHHHHHHhc-CCeEEEEECCc-cccCC---------C------CCc------cchHHHHHHHHHHHHHHHHHh
Confidence 4556666664 33 44689999985 32211 0 011 239999999999999988763
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++.+..++|+.+-.+..... ............ .+ ...+.+.+|+++++..++..
T Consensus 178 ~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l~~~ 234 (253)
T PRK08642 178 GPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAAT---TP-LRKVTTPQEFADAVLFFASP 234 (253)
T ss_pred CccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhc---CC-cCCCCCHHHHHHHHHHHcCc
Confidence 78999999999865432211 111222222111 11 23478899999999999964
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0017 Score=48.26 Aligned_cols=108 Identities=15% Similarity=0.126 Sum_probs=67.5
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. . +..+||++||.++.++... . ..|+.+|...+.+.+.++.+.
T Consensus 102 ~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~~~ 158 (235)
T PRK06550 102 STFLLTRAYLPQMLER-KSGIIINMCSIASFVAGGG--------------G--------AAYTASKHALAGFTKQLALDY 158 (235)
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC--------------C--------cccHHHHHHHHHHHHHHHHHh
Confidence 45566666543 3 3458999999743332110 0 239999999998888877643
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
|+++++++|+.+.++....... ............ + ...+...+|+|.++..++..
T Consensus 159 ~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 159 AKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET---P-IKRWAEPEEVAELTLFLASG 216 (235)
T ss_pred hhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC---C-cCCCCCHHHHHHHHHHHcCh
Confidence 8999999999998775332111 111112222221 1 22356789999999999864
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0033 Score=47.27 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=63.8
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i 83 (216)
++.+.+. +..++|++||.+++.+.. +.+.|+.||...|.+++.++++. |+++..
T Consensus 129 ~~~~~~~-~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~ 185 (252)
T PRK07035 129 GKLMKEQ-GGGSIVNVASVNGVSPGD----------------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNA 185 (252)
T ss_pred HHHHHhC-CCcEEEEECchhhcCCCC----------------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEE
Confidence 3444444 557899999973333211 01239999999999999987653 899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+.|+.|-.+-..... ............ .+ ...+...+|+|+++..++...
T Consensus 186 i~PG~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 186 LLPGLTDTKFASALF-KNDAILKQALAH---IP-LRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred EeeccccCccccccc-CCHHHHHHHHcc---CC-CCCcCCHHHHHHHHHHHhCcc
Confidence 999998654322111 111122222111 11 112556899999999988754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0018 Score=48.44 Aligned_cols=106 Identities=18% Similarity=0.126 Sum_probs=66.3
Q ss_pred HHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 3 TLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 3 t~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
+.++++++. +. +.++||++||.+.+++... . ..|+.+|...+.+++.++++
T Consensus 118 ~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~~~~~--------------~--------~~y~~sK~a~~~~~~~~~~~~~ 174 (247)
T PRK05565 118 VMLLTRYALPYMIKR-KSGVIVNISSIWGLIGASC--------------E--------VLYSASKGAVNAFTKALAKELA 174 (247)
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEECCHhhccCCCC--------------c--------cHHHHHHHHHHHHHHHHHHHHH
Confidence 344555544 33 4568999999755554321 1 23999999988888777654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|++++++||+.+-.+..... ........... . ....+...+|+++++..++...
T Consensus 175 ~~gi~~~~v~pg~v~t~~~~~~---~~~~~~~~~~~---~-~~~~~~~~~~va~~~~~l~~~~ 230 (247)
T PRK05565 175 PSGIRVNAVAPGAIDTEMWSSF---SEEDKEGLAEE---I-PLGRLGKPEEIAKVVLFLASDD 230 (247)
T ss_pred HcCeEEEEEEECCccCcccccc---ChHHHHHHHhc---C-CCCCCCCHHHHHHHHHHHcCCc
Confidence 389999999999966543221 11111111111 1 1223668899999999998653
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0012 Score=51.76 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=32.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHc----CCcEEEEcCCCccCCCC
Q 027969 56 KEWYSLAKTLAEEAAWKFAKEN----GIDLVAIHPGTVIGPFF 94 (216)
Q Consensus 56 ~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~~ 94 (216)
...|+.||+..+.+.+.++++. |+.++++|||+|++...
T Consensus 190 ~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~ 232 (322)
T PRK07453 190 GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL 232 (322)
T ss_pred cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence 3569999999998888887754 79999999999987654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.001 Score=50.23 Aligned_cols=77 Identities=25% Similarity=0.231 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHI 132 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~ 132 (216)
.|+.||...|.+++.++++. ++++.+++|+.+..+...+... ..... ..... ...+ ....+.+.+|+++++.
T Consensus 158 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~ 234 (257)
T PRK12744 158 AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG--AEAVA-YHKTAAALSPFSKTGLTDIEDIVPFIR 234 (257)
T ss_pred cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc--cchhh-cccccccccccccCCCCCHHHHHHHHH
Confidence 39999999999999998764 6999999999997764322111 11100 00001 1112 2335889999999999
Q ss_pred HhhcC
Q 027969 133 RALEV 137 (216)
Q Consensus 133 ~~~~~ 137 (216)
.++..
T Consensus 235 ~l~~~ 239 (257)
T PRK12744 235 FLVTD 239 (257)
T ss_pred Hhhcc
Confidence 99974
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0015 Score=51.55 Aligned_cols=103 Identities=18% Similarity=0.100 Sum_probs=66.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----- 76 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----- 76 (216)
+++.++..+.+. +..+||++||. ..+.... ....|+.+|...+.+.+.+..+
T Consensus 123 ~~~~~l~~~~~~-~~g~iV~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~l~~el~~~~ 179 (334)
T PRK07109 123 GTLAALRHMRPR-DRGAIIQVGSA-LAYRSIP---------------------LQSAYCAAKHAIRGFTDSLRCELLHDG 179 (334)
T ss_pred HHHHHHHHHHhc-CCcEEEEeCCh-hhccCCC---------------------cchHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 355666666665 45789999997 5442211 0134999999999888776543
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++.+++++|+.|-.+... ...... .... ....+...+|+|++++.++..+
T Consensus 180 ~~I~v~~v~Pg~v~T~~~~--------~~~~~~---~~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 180 SPVSVTMVQPPAVNTPQFD--------WARSRL---PVEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred CCeEEEEEeCCCccCchhh--------hhhhhc---cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 2699999999998654311 011110 1111 1223567999999999999865
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0016 Score=48.56 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=69.1
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +.+++|++||.+.+++... ...|+.+|...+.+++.++++
T Consensus 118 ~~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~~a~e~ 174 (239)
T PRK07666 118 GVYYATRAVLPSMIER-QSGDIINISSTAGQKGAAV----------------------TSAYSASKFGVLGLTESLMQEV 174 (239)
T ss_pred HHHHHHHHHHHHHHhC-CCcEEEEEcchhhccCCCC----------------------CcchHHHHHHHHHHHHHHHHHh
Confidence 3455666554 33 5578999999744443211 023999999999888877643
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEE
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLL 146 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 146 (216)
.+++++++||+.+.++..... ....+ ....++..+|+|+++..++..+ .+.|+-
T Consensus 175 ~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-----~~~~~~~~~~~a~~~~~~l~~~--~~~~~~ 230 (239)
T PRK07666 175 RKHNIRVTALTPSTVATDMAVDL---------GLTDG-----NPDKVMQPEDLAEFIVAQLKLN--KRTFIK 230 (239)
T ss_pred hccCcEEEEEecCcccCcchhhc---------ccccc-----CCCCCCCHHHHHHHHHHHHhCC--CceEEE
Confidence 489999999999977542110 00011 1234577899999999999764 345543
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00054 Score=51.81 Aligned_cols=93 Identities=15% Similarity=0.126 Sum_probs=62.9
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---ENGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ 82 (216)
++.++++. +..+||++||.+++++... . ..|+.||...+.+++.+.. ..+++++
T Consensus 121 ~l~~~~~~-~~~~iv~isS~~~~~~~~~--------------~--------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~ 177 (257)
T PRK07024 121 FIAPMRAA-RRGTLVGIASVAGVRGLPG--------------A--------GAYSASKAAAIKYLESLRVELRPAGVRVV 177 (257)
T ss_pred HHHHHHhc-CCCEEEEEechhhcCCCCC--------------C--------cchHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 33355555 5578999999755543211 1 2399999999999988763 3489999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++||+.|.++..... . ++ ....+..+|+++.+..++.++
T Consensus 178 ~v~Pg~v~t~~~~~~-------------~---~~-~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 178 TIAPGYIRTPMTAHN-------------P---YP-MPFLMDADRFAARAARAIARG 216 (257)
T ss_pred EEecCCCcCchhhcC-------------C---CC-CCCccCHHHHHHHHHHHHhCC
Confidence 999999987542110 0 01 112357999999999999754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0046 Score=46.65 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=72.1
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..++|++||.+...+.. .. ..|+.+|...+.+++.++++
T Consensus 121 ~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------------~~--------~~Y~~sK~a~~~~~~~la~~~ 177 (255)
T PRK06113 121 SFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNI--------------NM--------TSYASSKAAASHLVRNMAFDL 177 (255)
T ss_pred hHHHHHHHHHHHHHhc-CCcEEEEEecccccCCCC--------------Cc--------chhHHHHHHHHHHHHHHHHHh
Confidence 56677777652 3 335899999973222110 01 23999999999999988754
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.++++.++.|+.+-.+..... ..+.+.....+. .+ ...+...+|+++++..++.... ..| .+.+.++
T Consensus 178 ~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~---~~-~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg 249 (255)
T PRK06113 178 GEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQH---TP-IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249 (255)
T ss_pred hhhCeEEEEEecccccccccccc--cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 378999999999865543211 112222222222 11 1236788999999999986432 234 4455443
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0017 Score=51.88 Aligned_cols=113 Identities=24% Similarity=0.173 Sum_probs=69.8
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.|++|+++||..+ +++|||++||+ ..=...+ .- +.... -..+-.+|+.+|+.+. ..|++
T Consensus 179 ~g~knlvdA~~~a-Gvk~~vlv~si-~~~~~~~----------~~--~~~~~---~~~~~~~k~~~e~~~~----~Sgl~ 237 (411)
T KOG1203|consen 179 EGTKNLVDACKKA-GVKRVVLVGSI-GGTKFNQ----------PP--NILLL---NGLVLKAKLKAEKFLQ----DSGLP 237 (411)
T ss_pred HHHHHHHHHHHHh-CCceEEEEEee-cCcccCC----------Cc--hhhhh---hhhhhHHHHhHHHHHH----hcCCC
Confidence 3899999999999 99999999887 2211111 10 00000 0115577777777774 55999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC--CCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
+++||++...-....... ...... ..+. +.-..+.-.|+|+.++.++.+.....
T Consensus 238 ytiIR~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~ 294 (411)
T KOG1203|consen 238 YTIIRPGGLEQDTGGQRE--------VVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF 294 (411)
T ss_pred cEEEeccccccCCCCcce--------ecccCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence 999999988654432110 011111 1111 22247788899999999998766555
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0039 Score=46.60 Aligned_cols=118 Identities=15% Similarity=0.120 Sum_probs=69.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||.+.+++... . ..|+.+|...+.+++.++++
T Consensus 114 ~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------~--------~~Y~~sk~a~~~~~~~la~~~ 170 (245)
T PRK12936 114 ATFRLTRELTHPMMRR-RYGRIINITSVVGVTGNPG--------------Q--------ANYCASKAGMIGFSKSLAQEI 170 (245)
T ss_pred HHHHHHHHHHHHHHHh-CCCEEEEECCHHhCcCCCC--------------C--------cchHHHHHHHHHHHHHHHHHh
Confidence 3445555543 23 4568999999755664321 1 22999999888887776553
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 149 (216)
.++++++++|+.+..+.... ..........+. .+ ...+.+.+|+++++..++..... .| .+++.++
T Consensus 171 ~~~~i~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~--~~-~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12936 171 ATRNVTVNCVAPGFIESAMTGK----LNDKQKEAIMGA--IP-MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG 241 (245)
T ss_pred hHhCeEEEEEEECcCcCchhcc----cChHHHHHHhcC--CC-CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 37999999999885543211 111111111111 11 22256799999999988854322 34 4555443
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0022 Score=47.92 Aligned_cols=97 Identities=19% Similarity=0.176 Sum_probs=63.1
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+.+. +..++|++||. ..++... ....|+.+|...+.+.+.+++. .++++.+
T Consensus 126 ~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~ 182 (241)
T PRK07454 126 LPGMRAR-GGGLIINVSSI-AARNAFP---------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCT 182 (241)
T ss_pred HHHHHhc-CCcEEEEEccH-HhCcCCC---------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence 3333444 45789999997 5553211 0123999999999988877543 4899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
+||+.+-.+..... . . . ..+ .....+..+|+|+++..++..+.
T Consensus 183 i~pg~i~t~~~~~~--~----~----~--~~~-~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 183 ITLGAVNTPLWDTE--T----V----Q--ADF-DRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred EecCcccCCccccc--c----c----c--ccc-ccccCCCHHHHHHHHHHHHcCCc
Confidence 99999876542110 0 0 0 000 11235789999999999997663
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0034 Score=47.16 Aligned_cols=115 Identities=17% Similarity=0.012 Sum_probs=65.6
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cC
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NG 78 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~ 78 (216)
+.++..+++..+.++||++||. ..+... .+ ...|+.+|...|.+++.++.+ .+
T Consensus 121 ~~~~~~~~~~~~~~~iv~~sS~-~~~~~~---------------~~------~~~Y~~sKaa~~~~~~~la~e~~~~~~~ 178 (251)
T PRK06924 121 STFMKHTKDWKVDKRVINISSG-AAKNPY---------------FG------WSAYCSSKAGLDMFTQTVATEQEEEEYP 178 (251)
T ss_pred HHHHHHHhccCCCceEEEecch-hhcCCC---------------CC------cHHHhHHHHHHHHHHHHHHHHhhhcCCC
Confidence 3444444443234589999996 433111 01 134999999999999988754 36
Q ss_pred CcEEEEcCCCccCCCCCC---CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC-CCCCceE
Q 027969 79 IDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-PKASGRY 144 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~~~ 144 (216)
+++..++|+.+-.+.... ........+...... .+ ...+...+|+|+++..++.. ....|.+
T Consensus 179 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~G~~ 244 (251)
T PRK06924 179 VKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL---KE-EGKLLSPEYVAKALRNLLETEDFPNGEV 244 (251)
T ss_pred eEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH---hh-cCCcCCHHHHHHHHHHHHhcccCCCCCE
Confidence 899999999885432110 000000001111110 01 11368899999999999976 4444543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00062 Score=50.97 Aligned_cols=98 Identities=21% Similarity=0.223 Sum_probs=66.8
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---Hc
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---EN 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~ 77 (216)
|+.++++++... .+-.++|++||.+..++... . ..|+.+|...+.+.+.++. ..
T Consensus 105 ~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~--------~~Y~asK~a~~~~~~~l~~e~~~~ 162 (240)
T PRK06101 105 GVANCIEGIQPHLSCGHRVVIVGSIASELALPR--------------A--------EAYGASKAAVAYFARTLQLDLRPK 162 (240)
T ss_pred HHHHHHHHHHHhhhcCCeEEEEechhhccCCCC--------------C--------chhhHHHHHHHHHHHHHHHHHHhc
Confidence 567788877652 12257999988744443211 0 2399999999999888763 44
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|++++++||+.++++-..... . . ....+..+|+++.++.+++.+
T Consensus 163 gi~v~~v~pg~i~t~~~~~~~------------~----~-~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 163 GIEVVTVFPGFVATPLTDKNT------------F----A-MPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred CceEEEEeCCcCCCCCcCCCC------------C----C-CCcccCHHHHHHHHHHHHhcC
Confidence 899999999999886432110 0 0 011367899999999999864
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0026 Score=47.87 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=66.9
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+..+++++.+. ....++|++||. ..+.... + ...|+.||...+.+++.++.+.
T Consensus 122 ~~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~~---------~------------~~~Y~~sKaa~~~~~~~la~e~~~~ 179 (252)
T PRK12747 122 APFFIIQQALSRLRDNSRIINISSA-ATRISLP---------D------------FIAYSMTKGAINTMTFTLAKQLGAR 179 (252)
T ss_pred HHHHHHHHHHHHhhcCCeEEEECCc-ccccCCC---------C------------chhHHHHHHHHHHHHHHHHHHHhHc
Confidence 455566655542 122489999998 3331110 0 0239999999999998887653
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
|+++.++.|+.|.++-..... .. .......+.. .+ ...+.+.+|+++++..++..
T Consensus 180 girvn~v~Pg~v~t~~~~~~~-~~-~~~~~~~~~~--~~-~~~~~~~~dva~~~~~l~s~ 234 (252)
T PRK12747 180 GITVNAILPGFIKTDMNAELL-SD-PMMKQYATTI--SA-FNRLGEVEDIADTAAFLASP 234 (252)
T ss_pred CCEEEEEecCCccCchhhhcc-cC-HHHHHHHHhc--Cc-ccCCCCHHHHHHHHHHHcCc
Confidence 899999999999876432110 00 1111111110 01 22377899999999998864
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00057 Score=52.56 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=35.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCcc
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVI 90 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~ 90 (216)
.++|++||.+..++... ...|+.||...|.+++.+..+. ++++.++.|+.|.
T Consensus 141 g~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~ 197 (287)
T PRK06194 141 GHIVNTASMAGLLAPPA----------------------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVP 197 (287)
T ss_pred eEEEEeCChhhccCCCC----------------------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCccc
Confidence 58999999744432110 1239999999999999887654 3556666666553
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.002 Score=48.69 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=62.2
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHH---HHcCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA---KENGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~ 80 (216)
+.++..+.+. +..+||++||. ..+... +.. ..|+.||.....+.+.+. +..+++
T Consensus 127 ~~l~~~~~~~-~~~~iv~isS~-~g~~~~-------------~~~--------~~Y~~sKaa~~~~~~~l~~el~~~~i~ 183 (253)
T PRK07904 127 VLLGEKMRAQ-GFGQIIAMSSV-AGERVR-------------RSN--------FVYGSTKAGLDGFYLGLGEALREYGVR 183 (253)
T ss_pred HHHHHHHHhc-CCceEEEEech-hhcCCC-------------CCC--------cchHHHHHHHHHHHHHHHHHHhhcCCE
Confidence 4567777766 56799999997 322110 001 239999999987766654 345899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++|+.+..+-... . .. ....+..+|+|+.++.++.++
T Consensus 184 v~~v~Pg~v~t~~~~~-----------~-~~------~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 184 VLVVRPGQVRTRMSAH-----------A-KE------APLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred EEEEeeCceecchhcc-----------C-CC------CCCCCCHHHHHHHHHHHHHcC
Confidence 9999999997642210 0 00 111357899999999999765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00067 Score=51.97 Aligned_cols=117 Identities=21% Similarity=0.187 Sum_probs=70.3
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---ENGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~ 79 (216)
++.+++.+.+. +..+||++||. ..+.... +...|+.||...|.+++.++. ..|+
T Consensus 115 ~~~~l~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~l~~el~~~gi 171 (277)
T PRK05993 115 TRRVIPVMRKQ-GQGRIVQCSSI-LGLVPMK---------------------YRGAYNASKFAIEGLSLTLRMELQGSGI 171 (277)
T ss_pred HHHHHHHHhhc-CCCEEEEECCh-hhcCCCC---------------------ccchHHHHHHHHHHHHHHHHHHhhhhCC
Confidence 56777777776 66799999997 3221100 012399999999999887753 3589
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC----------------CCCCCCCceeehhhhHHHHHHhhcCCCCCce
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD----------------QSFAFPYIFVEIRDVVYAHIRALEVPKASGR 143 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 143 (216)
++++++|+.|-.+-.... . ..+....... .........+..+++|+.++.++.++.....
T Consensus 172 ~v~~v~Pg~v~T~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~~~~~ 247 (277)
T PRK05993 172 HVSLIEPGPIETRFRANA---L-AAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAPRPRPH 247 (277)
T ss_pred EEEEEecCCccCchhhHH---H-HHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCCCCCCe
Confidence 999999999865432110 0 0000000000 0000111135789999999999987654445
Q ss_pred EEE
Q 027969 144 YLL 146 (216)
Q Consensus 144 ~~~ 146 (216)
|..
T Consensus 248 ~~~ 250 (277)
T PRK05993 248 YRV 250 (277)
T ss_pred eee
Confidence 543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.003 Score=47.34 Aligned_cols=94 Identities=19% Similarity=0.092 Sum_probs=60.3
Q ss_pred EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCC
Q 027969 18 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 94 (216)
Q Consensus 18 ~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~ 94 (216)
+||++||.+++++... . . ..|+.||...+.+++.++++. +++++++||+.+..+..
T Consensus 137 ~ii~~sS~~~~~~~~~------~-------~--------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~ 195 (248)
T PRK06947 137 AIVNVSSIASRLGSPN------E-------Y--------VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH 195 (248)
T ss_pred EEEEECchhhcCCCCC------C-------C--------cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence 6999999755554321 0 0 129999999999988887653 79999999999987643
Q ss_pred CCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 95 QPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
... ......... ... .+ ..-....+|++++++.++...
T Consensus 196 ~~~--~~~~~~~~~-~~~--~~-~~~~~~~e~va~~~~~l~~~~ 233 (248)
T PRK06947 196 ASG--GQPGRAARL-GAQ--TP-LGRAGEADEVAETIVWLLSDA 233 (248)
T ss_pred ccc--CCHHHHHHH-hhc--CC-CCCCcCHHHHHHHHHHHcCcc
Confidence 211 111111111 111 11 111456899999999988764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00056 Score=51.28 Aligned_cols=126 Identities=11% Similarity=0.003 Sum_probs=69.7
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCC----CCCCc------ccccccchhHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDET----WFSNP------VLCKENKEWYSLAKTLAEEAA 70 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~----~~~~~------~~~~~~~~~Y~~sK~~~E~~~ 70 (216)
|+..+++++... ..-.+||++||. ..|+... ..+..|. ..... ..+....+.|+.||...+.+.
T Consensus 74 ~~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~ 148 (241)
T PRK12428 74 GLRHLTEALLPRMAPGGAIVNVASL-AGAEWPQ----RLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWT 148 (241)
T ss_pred HHHHHHHHHHHhccCCcEEEEeCcH-Hhhcccc----chHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHH
Confidence 566677777542 122589999998 6664321 1111111 00000 001112245999999999988
Q ss_pred HHHH-H---HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 71 WKFA-K---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 71 ~~~~-~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+.++ . ..|+++.+++||.|.++-......... ..... ....+ ...+...+|+|+++..++..
T Consensus 149 ~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 149 MRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVD-SDAKR-MGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred HHHHHHhhhccCeEEEEeecCCccCcccccchhhhh---hHhhh-hcccc-cCCCCCHHHHHHHHHHHcCh
Confidence 8777 3 348999999999998764321100000 00000 00112 11256789999999998854
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0035 Score=47.61 Aligned_cols=105 Identities=19% Similarity=0.104 Sum_probs=65.6
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ 82 (216)
++..+.+. +..+||++||..+.++... . ..|+.+|...+.+++.++++. |+++.
T Consensus 129 ~~~~~~~~-~~g~iv~isS~~~~~~~~~--------------~--------~~Y~~sKaal~~l~~~la~e~~~~gi~v~ 185 (265)
T PRK07097 129 VIPSMIKK-GHGKIINICSMMSELGRET--------------V--------SAYAAAKGGLKMLTKNIASEYGEANIQCN 185 (265)
T ss_pred HHHHHHhc-CCcEEEEEcCccccCCCCC--------------C--------ccHHHHHHHHHHHHHHHHHHhhhcCceEE
Confidence 33334444 4568999999745443211 1 239999999999999988764 89999
Q ss_pred EEcCCCccCCCCCCCCC-----ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 83 AIHPGTVIGPFFQPILN-----FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++|+.+..+...+... ....+...+... .+ ...+...+|+|.++..++..
T Consensus 186 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~ 241 (265)
T PRK07097 186 GIGPGYIATPQTAPLRELQADGSRHPFDQFIIAK---TP-AARWGDPEDLAGPAVFLASD 241 (265)
T ss_pred EEEeccccccchhhhhhccccccchhHHHHHHhc---CC-ccCCcCHHHHHHHHHHHhCc
Confidence 99999998875322100 000111111111 11 11366789999999999875
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0032 Score=47.59 Aligned_cols=104 Identities=18% Similarity=0.123 Sum_probs=64.2
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ 82 (216)
++..+++. +..++|++||. ..+.... .. ..|+.+|...|.+++.++++. |+++.
T Consensus 133 ~~~~~~~~-~~g~iv~isS~-~~~~~~~-------------~~--------~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 189 (258)
T PRK06935 133 VAKVMAKQ-GSGKIINIASM-LSFQGGK-------------FV--------PAYTASKHGVAGLTKAFANELAAYNIQVN 189 (258)
T ss_pred HHHHHHhc-CCeEEEEECCH-HhccCCC-------------Cc--------hhhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 33444444 45689999997 4442111 01 239999999999999987753 79999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+++|+.|..+...... ............ .+ ...+...+|++.++..++..
T Consensus 190 ~i~PG~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~s~ 239 (258)
T PRK06935 190 AIAPGYIKTANTAPIR-ADKNRNDEILKR---IP-AGRWGEPDDLMGAAVFLASR 239 (258)
T ss_pred EEEeccccccchhhcc-cChHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHcCh
Confidence 9999998766432110 011111111111 11 12366779999999998864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0039 Score=47.64 Aligned_cols=78 Identities=19% Similarity=0.106 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccH-HHHHHHHcCC-CCCCCCCceeehhhhHHHHHH
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGA-EVILNLINGD-QSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~ 133 (216)
|+.||...+.+++.++++. |+++.++.|+.|..+-......... .......... ...+ ...+...+|+++++..
T Consensus 154 Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~ 232 (272)
T PRK08589 154 YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-LGRLGKPEEVAKLVVF 232 (272)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-CCCCcCHHHHHHHHHH
Confidence 9999999999999987643 7999999999997653221100000 0000111100 1112 1125689999999999
Q ss_pred hhcC
Q 027969 134 ALEV 137 (216)
Q Consensus 134 ~~~~ 137 (216)
++..
T Consensus 233 l~s~ 236 (272)
T PRK08589 233 LASD 236 (272)
T ss_pred HcCc
Confidence 8864
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0069 Score=45.76 Aligned_cols=111 Identities=11% Similarity=-0.031 Sum_probs=68.0
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.+ .....++|++||. ..++... ....|+.+|...|.+++.++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~g~iv~~ss~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~a~e~ 175 (260)
T PRK06198 118 APFFLMQEAIKLMRRRKAEGTIVNIGSM-SAHGGQP---------------------FLAAYCASKGALATLTRNAAYAL 175 (260)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEECCc-ccccCCC---------------------CcchhHHHHHHHHHHHHHHHHHh
Confidence 44566665543 2123579999997 5443211 00239999999999999877643
Q ss_pred ---CCcEEEEcCCCccCCCCCCC---C-CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPI---L-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++.++.++|+.+.++..... . +....++....... ....+++.+|+++++..++...
T Consensus 176 ~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~~ 239 (260)
T PRK06198 176 LRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ----PFGRLLDPDEVARAVAFLLSDE 239 (260)
T ss_pred cccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC----CccCCcCHHHHHHHHHHHcChh
Confidence 68999999999988753210 0 01112222211110 1223678999999999998644
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0068 Score=45.74 Aligned_cols=121 Identities=17% Similarity=0.086 Sum_probs=70.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+.+. +..++|++||. ..++... + ....|+.||...+.+++.++.+ .+++
T Consensus 119 ~~~l~~~~~~-~~g~iv~isS~-~~~~~~~---------~-----------~~~~Y~asKaa~~~~~~~la~e~~~~~i~ 176 (255)
T PRK06463 119 YEFLPLLKLS-KNGAIVNIASN-AGIGTAA---------E-----------GTTFYAITKAGIIILTRRLAFELGKYGIR 176 (255)
T ss_pred HHHHHHHHhc-CCcEEEEEcCH-HhCCCCC---------C-----------CccHhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 4455555544 44689999997 5442211 0 0123999999999999998764 3899
Q ss_pred EEEEcCCCccCCCCCCCC-CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPIL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+.+++|+.|-.+-..... .............. .+ ...+...+|+++++..++.... ..| .+.+.++
T Consensus 177 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 177 VNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK--TV-LKTTGKPEDIANIVLFLASDDARYITGQVIVADGG 246 (255)
T ss_pred EEEEeeCCCCCchhhcccCccchHHHHHHHHhC--CC-cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 999999988543221100 00001111111111 11 1235679999999999986532 234 4455443
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0059 Score=46.62 Aligned_cols=117 Identities=14% Similarity=0.134 Sum_probs=66.9
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++++... .+..++|++||.+++++... ...|+.+|...+.+.+.++.+
T Consensus 106 g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~~sK~al~~~~~~l~~e~~~ 163 (274)
T PRK05693 106 AVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF----------------------AGAYCASKAAVHALSDALRLELAP 163 (274)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC----------------------ccHHHHHHHHHHHHHHHHHHHhhh
Confidence 445566655321 13357999999744432110 134999999999988877654
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-----------CCCceeehhhhHHHHHHhhcCCCCCceE
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-----------FPYIFVEIRDVVYAHIRALEVPKASGRY 144 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 144 (216)
.|+++++++|+.|..+-..... .......... +.++ ........+|+|+.+..+++++.....+
T Consensus 164 ~gi~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~ 239 (274)
T PRK05693 164 FGVQVMEVQPGAIASQFASNAS----REAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSPRPRLV 239 (274)
T ss_pred hCeEEEEEecCccccccccccc----cchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCCceE
Confidence 5899999999999765322100 0000000000 0000 0112356899999999998865544444
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0049 Score=46.54 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...+.+++.++.+ .++++..++|+.+.++..... ......... ...+ ...+.+.+|++.++..++
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~---~~~~-~~~~~~~~dva~~~~~l~ 225 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD---DSDVKPDSR---PGIP-LGRPGDTHEIASLVAWLC 225 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc---ChHHHHHHH---hcCC-CCCCCCHHHHHHHHHHHh
Confidence 999999999998887764 379999999999988753221 111111111 1122 112458899999999988
Q ss_pred cCCC--CCc-eEEEecC
Q 027969 136 EVPK--ASG-RYLLAGS 149 (216)
Q Consensus 136 ~~~~--~~~-~~~~~~~ 149 (216)
.... ..| .+.+.|+
T Consensus 226 ~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 226 SEGASYTTGQSLIVDGG 242 (256)
T ss_pred CccccCcCCcEEEECCC
Confidence 6432 234 3444444
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0042 Score=47.54 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=67.2
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++... .+-.++|++||.++.++... . ..|+.||...|.+++.++++.
T Consensus 130 g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~e~~ 187 (280)
T PLN02253 130 GVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--------------P--------HAYTGSKHAVLGLTRSVAAELG 187 (280)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------------C--------cccHHHHHHHHHHHHHHHHHhh
Confidence 456666666531 12247888888755554321 0 139999999999999987753
Q ss_pred --CCcEEEEcCCCccCCCCCCCCC--c-cHHHHHH---HHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILN--F-GAEVILN---LINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~--~-~~~~~~~---~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++.+.+++|+.+..+....... . ....+.. ..... .+.....++.+|+|+++..++..
T Consensus 188 ~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~dva~~~~~l~s~ 253 (280)
T PLN02253 188 KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN--ANLKGVELTVDDVANAVLFLASD 253 (280)
T ss_pred hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcC--CCCcCCCCCHHHHHHHHHhhcCc
Confidence 7999999999997764221100 0 0011111 11110 01012257899999999999864
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0053 Score=45.47 Aligned_cols=111 Identities=19% Similarity=0.168 Sum_probs=73.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---C
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---G 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~ 78 (216)
+|+.+|=...+. +..++|.+||+++.|.... .+.|+.||+....+.+...++. +
T Consensus 119 ~~~avLP~m~~r-~~G~IiN~~SiAG~~~y~~----------------------~~vY~ATK~aV~~fs~~LR~e~~g~~ 175 (246)
T COG4221 119 GTRAVLPGMVER-KSGHIINLGSIAGRYPYPG----------------------GAVYGATKAAVRAFSLGLRQELAGTG 175 (246)
T ss_pred HHHHhhhHHHhc-CCceEEEeccccccccCCC----------------------CccchhhHHHHHHHHHHHHHHhcCCC
Confidence 345555555555 4458999999966664432 1339999999998887776653 8
Q ss_pred CcEEEEcCCCccCCCCCCC-CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 79 IDLVAIHPGTVIGPFFQPI-LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
++++.+-|+.|-....... .........+... ....+..+|+|+++.++++.|..-.
T Consensus 176 IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~-------~~~~l~p~dIA~~V~~~~~~P~~vn 233 (246)
T COG4221 176 IRVTVISPGLVETTEFSTVRFEGDDERADKVYK-------GGTALTPEDIAEAVLFAATQPQHVN 233 (246)
T ss_pred eeEEEecCceecceecccccCCchhhhHHHHhc-------cCCCCCHHHHHHHHHHHHhCCCccc
Confidence 9999999999854321110 0011122223222 3468899999999999999886554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0054 Score=45.70 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=63.4
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
++..+++. +..++|++||.+...+... . ..|+.+|...+.+++.++++ .++.+.
T Consensus 120 ~~~~~~~~-~~~~iv~iss~~~~~~~~~--------------~--------~~y~~sk~a~~~~~~~la~~~~~~~i~v~ 176 (242)
T TIGR01829 120 VIDGMRER-GWGRIINISSVNGQKGQFG--------------Q--------TNYSAAKAGMIGFTKALAQEGATKGVTVN 176 (242)
T ss_pred HHHHHHhc-CCcEEEEEcchhhcCCCCC--------------c--------chhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 44455555 5678999999733332110 1 23999999998888777653 389999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+++|+.+.++.... .....+.....+. + ...+...+|+++++..++..
T Consensus 177 ~i~pg~~~t~~~~~---~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~l~~~ 224 (242)
T TIGR01829 177 TISPGYIATDMVMA---MREDVLNSIVAQI---P-VGRLGRPEEIAAAVAFLASE 224 (242)
T ss_pred EEeeCCCcCccccc---cchHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHcCc
Confidence 99999998775432 1122232222221 1 11244568999998877754
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0053 Score=46.60 Aligned_cols=109 Identities=15% Similarity=0.073 Sum_probs=67.1
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.+. .+..++|++||.++.++.. +.+.|+.||...+.+++.+..+.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~~~~e~ 178 (263)
T PRK07814 121 TAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR----------------------GFAAYGTAKAALAHYTRLAALDL 178 (263)
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC----------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 466777777531 1446899999973333211 01239999999999999887753
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++.+..++|+.+..+..... .....+... ..+. .+ .......+|+++++..++..
T Consensus 179 ~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~-~~~~--~~-~~~~~~~~~va~~~~~l~~~ 235 (263)
T PRK07814 179 CPRIRVNAIAPGSILTSALEVV-AANDELRAP-MEKA--TP-LRRLGDPEDIAAAAVYLASP 235 (263)
T ss_pred CCCceEEEEEeCCCcCchhhhc-cCCHHHHHH-HHhc--CC-CCCCcCHHHHHHHHHHHcCc
Confidence 57888999998865432210 001111111 1111 11 12256789999999999865
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0042 Score=46.28 Aligned_cols=105 Identities=18% Similarity=0.144 Sum_probs=66.3
Q ss_pred cHHHHHHHHh-----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA-----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~-----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++. +. +..+||++||.+++++... . ..|+.+|...+.+.+.++.+
T Consensus 110 ~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~la~e 166 (239)
T TIGR01831 110 GFYNVIHPCTMPMIRAR-QGGRIITLASVSGVMGNRG--------------Q--------VNYSAAKAGLIGATKALAVE 166 (239)
T ss_pred HHHHHHHHHHHHHHhhc-CCeEEEEEcchhhccCCCC--------------C--------cchHHHHHHHHHHHHHHHHH
Confidence 4556666542 23 3468999999756664321 0 22999999988888776654
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.|+++..++|+.+.++.... ........... .+ ...+...+|+++++..++..
T Consensus 167 ~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l~~~ 222 (239)
T TIGR01831 167 LAKRKITVNCIAPGLIDTEMLAE----VEHDLDEALKT---VP-MNRMGQPAEVASLAGFLMSD 222 (239)
T ss_pred HhHhCeEEEEEEEccCccccchh----hhHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHcCc
Confidence 38999999999997654321 11112222211 12 11245679999999999875
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0067 Score=52.51 Aligned_cols=118 Identities=19% Similarity=0.126 Sum_probs=68.2
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
++..+.+.+.-.++|++||.+++++... ...|+.||...+.+++.++.+ .|+++.
T Consensus 535 al~~m~~~~~~g~IV~iSS~~a~~~~~~----------------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn 592 (676)
T TIGR02632 535 AFRQMREQGLGGNIVFIASKNAVYAGKN----------------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVN 592 (676)
T ss_pred HHHHHHhcCCCCEEEEEeChhhcCCCCC----------------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 3344444311247999999755554321 134999999999999998775 379999
Q ss_pred EEcCCCcc-CCCCCCCCCc---------cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 83 AIHPGTVI-GPFFQPILNF---------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 83 ilR~~~v~-G~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
.++|+.|+ |.+....... ....+....... .....+++.+|+|+++.+++... ...| .+++.|
T Consensus 593 ~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r---~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 593 TVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKR---TLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred EEECCceecCcccccccchhhhhhcccCChHHHHHHHHhc---CCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 99999987 4332111000 000001101100 01234688999999999988643 2234 445544
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0042 Score=46.74 Aligned_cols=97 Identities=21% Similarity=0.081 Sum_probs=60.0
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.+.+++... .+.|+.+|...|.+++.++++. ++.+.+++|+.+..+.
T Consensus 130 ~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 130 GKIINAASIAGHEGNPI----------------------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred eEEEEecchhhcCCCCC----------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence 68999999755554321 1339999999999998876653 7999999999885543
Q ss_pred CCCCCCcc--------HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 94 FQPILNFG--------AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 94 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
........ ......... .. ....+...+|+++++..++..+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 188 WEEIDEETSEIAGKPIGEGFEEFSS---EI-ALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred hhhhhhhhhhcccCchHHHHHHHHh---hC-CCCCCCCHHHHHHHHHhhccccc
Confidence 11100000 000000000 00 11237888999999999998653
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0056 Score=46.82 Aligned_cols=106 Identities=16% Similarity=0.063 Sum_probs=65.4
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+.+. +..+||++||. ..+.... .. ..|+.||...+.+++.++.+. ++++
T Consensus 143 ~~~~~~~~~-~~g~ii~isS~-~~~~~~~-------------~~--------~~Y~~sK~a~~~l~~~la~e~~~~girv 199 (278)
T PRK08277 143 VFAKDMVGR-KGGNIINISSM-NAFTPLT-------------KV--------PAYSAAKAAISNFTQWLAVHFAKVGIRV 199 (278)
T ss_pred HHHHHHHhc-CCcEEEEEccc-hhcCCCC-------------CC--------chhHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 344445444 44689999997 4442211 01 239999999999999887764 7999
Q ss_pred EEEcCCCccCCCCCCCC----CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 82 VAIHPGTVIGPFFQPIL----NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++|+.|..+...... .........+... .+ ..-+...+|+|++++.++..
T Consensus 200 n~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 200 NAIAPGFFLTEQNRALLFNEDGSLTERANKILAH---TP-MGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred EEEEeccCcCcchhhhhccccccchhHHHHHhcc---CC-ccCCCCHHHHHHHHHHHcCc
Confidence 99999999887432100 0001111111111 11 12256789999999998865
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0037 Score=46.75 Aligned_cols=97 Identities=20% Similarity=0.225 Sum_probs=64.2
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..++|++||.++.++... . ..|+.+|...+.+.+.++.+
T Consensus 110 ~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~l~~el 166 (243)
T PRK07102 110 GPIALLTLLANRFEAR-GSGTIVGISSVAGDRGRAS--------------N--------YVYGSAKAALTAFLSGLRNRL 166 (243)
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEEecccccCCCCC--------------C--------cccHHHHHHHHHHHHHHHHHh
Confidence 34555555543 3 5578999999733332110 0 23999999999998887543
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+++.+++|+.+.++..... . .+ ....+..+|+++++..+++++
T Consensus 167 ~~~gi~v~~v~pg~v~t~~~~~~------------~----~~-~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 167 FKSGVHVLTVKPGFVRTPMTAGL------------K----LP-GPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred hccCcEEEEEecCcccChhhhcc------------C----CC-ccccCCHHHHHHHHHHHHhCC
Confidence 389999999999987532110 0 01 122466899999999999854
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0044 Score=51.90 Aligned_cols=122 Identities=17% Similarity=0.170 Sum_probs=72.3
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||.++..+... ...|+.+|...+.+++.++++.
T Consensus 378 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~ 435 (520)
T PRK06484 378 GAFACARAAARLMSQGGVIVNLGSIASLLALPP----------------------RNAYCASKAAVTMLSRSLACEWAPA 435 (520)
T ss_pred HHHHHHHHHHHHhccCCEEEEECchhhcCCCCC----------------------CchhHHHHHHHHHHHHHHHHHhhhh
Confidence 455666665542 12358999999844332110 1239999999999999887653
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+-..............+.+. .+ ...+...+|+|+++..++... ...| .+.+.++
T Consensus 436 gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 436 GIRVNTVAPGYIETPAVLALKASGRADFDSIRRR---IP-LGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred CeEEEEEEeCCccCchhhhhccccHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 7999999999997764221100001111122211 11 112567899999999998643 2334 4445444
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.015 Score=43.83 Aligned_cols=109 Identities=16% Similarity=0.005 Sum_probs=66.0
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. ..+..+||++||.+...+... .+.|+.+|...|.+++.++.+.
T Consensus 109 ~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~ 166 (252)
T PRK07856 109 APLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG----------------------TAAYGAAKAGLLNLTRSLAVEW 166 (252)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC----------------------CchhHHHHHHHHHHHHHHHHHh
Confidence 45566666543 113358999999733322110 1339999999999999988753
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+.+..++|+.|..+...... ........+... .+ ...+...+|+++++..++..
T Consensus 167 ~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~p~~va~~~~~L~~~ 223 (252)
T PRK07856 167 APKVRVNAVVVGLVRTEQSELHY-GDAEGIAAVAAT---VP-LGRLATPADIAWACLFLASD 223 (252)
T ss_pred cCCeEEEEEEeccccChHHhhhc-cCHHHHHHHhhc---CC-CCCCcCHHHHHHHHHHHcCc
Confidence 378889999999765422111 011111122111 11 12255789999999998864
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0092 Score=45.00 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=63.6
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+.+. +..++|++||.++..+... +.. ..|+.+|...+.+++.++.+ .|+++.+
T Consensus 129 ~~~~~~~-~~~~iv~isS~~~~~~~~~------------~~~--------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~ 187 (254)
T PRK06114 129 ARAMLEN-GGGSIVNIASMSGIIVNRG------------LLQ--------AHYNASKAGVIHLSKSLAMEWVGRGIRVNS 187 (254)
T ss_pred HHHHHhc-CCcEEEEECchhhcCCCCC------------CCc--------chHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 3334444 4468999999744443211 001 23999999999998888764 4899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++|+.+..+-.... ........+... .| ..-+...+|++.++++++..
T Consensus 188 v~PG~i~t~~~~~~--~~~~~~~~~~~~---~p-~~r~~~~~dva~~~~~l~s~ 235 (254)
T PRK06114 188 ISPGYTATPMNTRP--EMVHQTKLFEEQ---TP-MQRMAKVDEMVGPAVFLLSD 235 (254)
T ss_pred EeecCccCcccccc--cchHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCc
Confidence 99999977653211 111111111111 12 11245789999999998864
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0092 Score=45.05 Aligned_cols=108 Identities=17% Similarity=0.119 Sum_probs=67.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..++|++||. ..+.... ....|+.+|...+.+++.++.+
T Consensus 122 ~~~~l~~~~~~~~~~~-~~~~ii~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 178 (257)
T PRK09242 122 SAFELSRYAHPLLKQH-ASSAIVNIGSV-SGLTHVR---------------------SGAPYGMTKAALLQMTRNLAVEW 178 (257)
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEECcc-ccCCCCC---------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence 4455666553 33 44689999997 4332111 0123999999999999887654
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++++..++|+.+.++...... ............. + ..-+...+|++.++..++..
T Consensus 179 ~~~~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~va~~~~~l~~~ 236 (257)
T PRK09242 179 AEDGIRVNAVAPWYIRTPLTSGPL-SDPDYYEQVIERT---P-MRRVGEPEEVAAAVAFLCMP 236 (257)
T ss_pred HHhCeEEEEEEECCCCCccccccc-CChHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCc
Confidence 3899999999999887543211 1122232222221 1 11244678999999998864
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0093 Score=45.17 Aligned_cols=74 Identities=15% Similarity=-0.032 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+++.++.+. |+++..+.|+.+-.+-... .............. .+ ...+...+|++.++..++
T Consensus 165 Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~-~~~~~~~~~~~~~~---~~-~~r~~~p~~va~~~~~l~ 239 (260)
T PRK08416 165 HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA-FTNYEEVKAKTEEL---SP-LNRMGQPEDLAGACLFLC 239 (260)
T ss_pred chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh-ccCCHHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHc
Confidence 9999999999999988764 8999999999884432111 00111111111111 11 123667999999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 240 ~~ 241 (260)
T PRK08416 240 SE 241 (260)
T ss_pred Ch
Confidence 64
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0024 Score=48.25 Aligned_cols=119 Identities=15% Similarity=0.115 Sum_probs=67.4
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+++. +..++|++||. ..+... .+ ....|+.+|...+.+++.++++ .|+++.+
T Consensus 122 ~~~~~~~-~~g~ii~isS~-~~~~~~---------~~-----------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~ 179 (260)
T PRK06523 122 LPGMIAR-GSGVIIHVTSI-QRRLPL---------PE-----------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNT 179 (260)
T ss_pred HHHHHhc-CCcEEEEEecc-cccCCC---------CC-----------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence 4444444 44689999997 333110 00 0123999999999998888764 3799999
Q ss_pred EcCCCccCCCCCCCC-------Ccc-HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 84 IHPGTVIGPFFQPIL-------NFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 84 lR~~~v~G~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
++|+.|..+...... ... ......+.......+ ...+...+|+++++..++... ...| .+.+.|
T Consensus 180 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 180 VSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-LGRPAEPEEVAELIAFLASDRAASITGTEYVIDG 254 (260)
T ss_pred EecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-cCCCCCHHHHHHHHHHHhCcccccccCceEEecC
Confidence 999999876532100 000 011111111000112 112457899999999998643 2233 455543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0089 Score=44.98 Aligned_cols=103 Identities=16% Similarity=0.029 Sum_probs=62.7
Q ss_pred HHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEc
Q 027969 9 SCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIH 85 (216)
Q Consensus 9 ~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR 85 (216)
...+. +..++|++||. ..+.... ....|+.+|...+.+++.++.+. ++++.+++
T Consensus 130 ~~~~~-~~~~ii~~sS~-~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~ 186 (253)
T PRK06172 130 LMLAQ-GGGAIVNTASV-AGLGAAP---------------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVC 186 (253)
T ss_pred HHHhc-CCcEEEEECch-hhccCCC---------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEE
Confidence 33334 44689999997 4442211 01239999999999999887654 79999999
Q ss_pred CCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 86 PGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 86 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+.|-.+................ ... .+ ...+...+|+++.+..++...
T Consensus 187 PG~v~t~~~~~~~~~~~~~~~~~-~~~--~~-~~~~~~p~~ia~~~~~l~~~~ 235 (253)
T PRK06172 187 PAVIDTDMFRRAYEADPRKAEFA-AAM--HP-VGRIGKVEEVASAVLYLCSDG 235 (253)
T ss_pred eCCccChhhhhhcccChHHHHHH-hcc--CC-CCCccCHHHHHHHHHHHhCcc
Confidence 99986554322111011111111 111 11 123567899999999998653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0067 Score=45.12 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...|.+++.++++ .++++.+++|+.+..+-.... . ...... ... .+ ...+...+|+++++..+
T Consensus 145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~---~-~~~~~~-~~~--~~-~~~~~~p~~~a~~~~~l 216 (237)
T PRK12742 145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN---G-PMKDMM-HSF--MA-IKRHGRPEEVAGMVAWL 216 (237)
T ss_pred chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc---c-HHHHHH-Hhc--CC-CCCCCCHHHHHHHHHHH
Confidence 3999999999999887664 379999999999976542211 1 111111 111 11 11246789999999999
Q ss_pred hcCC
Q 027969 135 LEVP 138 (216)
Q Consensus 135 ~~~~ 138 (216)
+...
T Consensus 217 ~s~~ 220 (237)
T PRK12742 217 AGPE 220 (237)
T ss_pred cCcc
Confidence 8653
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0049 Score=47.92 Aligned_cols=81 Identities=20% Similarity=0.182 Sum_probs=48.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
|..+++.+++. +..+||++||. ..+.... .+.++..+..+ ..+...|+.||+..+.+.+.++++. ++
T Consensus 132 ~~~ll~~l~~~-~~~~iV~vSS~-~~~~~~~-----~~~~~~~~~~~---~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i 201 (306)
T PRK06197 132 TGLLLDRLLPV-PGSRVVTVSSG-GHRIRAA-----IHFDDLQWERR---YNRVAAYGQSKLANLLFTYELQRRLAAAGA 201 (306)
T ss_pred HHHHHHHHhhC-CCCEEEEECCH-HHhccCC-----CCccccCcccC---CCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 56677777766 45799999997 4332111 11111111111 1122459999999999999887653 55
Q ss_pred cEE--EEcCCCccCCC
Q 027969 80 DLV--AIHPGTVIGPF 93 (216)
Q Consensus 80 ~~~--ilR~~~v~G~~ 93 (216)
++. .+.||.|..+-
T Consensus 202 ~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 202 TTIAVAAHPGVSNTEL 217 (306)
T ss_pred CeEEEEeCCCcccCcc
Confidence 444 45899886543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.015 Score=43.84 Aligned_cols=107 Identities=16% Similarity=0.098 Sum_probs=64.5
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +..++|++||. ..+.... . ....|+.||...+.+++.++++. |+.
T Consensus 124 ~~~~~~l~~~-~~~~iv~~sS~-~~~~~~~--------~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 181 (254)
T PRK07478 124 KHQIPAMLAR-GGGSLIFTSTF-VGHTAGF--------P------------GMAAYAASKAGLIGLTQVLAAEYGAQGIR 181 (254)
T ss_pred HHHHHHHHhc-CCceEEEEech-HhhccCC--------C------------CcchhHHHHHHHHHHHHHHHHHHhhcCEE
Confidence 3445555555 45689999997 4332110 0 01239999999999999887653 799
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+.+++|+.|-.+-.... ...... ....... .+ ...+...+|++++++.++..
T Consensus 182 v~~v~PG~v~t~~~~~~-~~~~~~-~~~~~~~--~~-~~~~~~~~~va~~~~~l~s~ 233 (254)
T PRK07478 182 VNALLPGGTDTPMGRAM-GDTPEA-LAFVAGL--HA-LKRMAQPEEIAQAALFLASD 233 (254)
T ss_pred EEEEeeCcccCcccccc-cCCHHH-HHHHHhc--CC-CCCCcCHHHHHHHHHHHcCc
Confidence 99999999965522111 011111 1111111 11 12256789999999998864
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0033 Score=46.79 Aligned_cols=67 Identities=25% Similarity=0.220 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...+.+++.+.+. .+++++++||++++++-... ..+... . .....++..+|+++++..++
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~------~~~~~~-~-----~~~~~~~~~~~va~~~~~~~ 217 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE------RNWKKL-R-----KLGDDMAPPEDFAKVIIWLL 217 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch------hhhhhh-c-----cccCCCCCHHHHHHHHHHHh
Confidence 999999999888887764 38999999999999864211 001111 0 01123567799999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 218 ~~ 219 (238)
T PRK05786 218 TD 219 (238)
T ss_pred cc
Confidence 65
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.024 Score=42.86 Aligned_cols=75 Identities=13% Similarity=0.089 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+.+.++.+ .++++.+++|+.|..+...... ............ .+ ...+...+|+++++..+
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l 231 (261)
T PRK08936 157 HYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF-ADPKQRADVESM---IP-MGYIGKPEEIAAVAAWL 231 (261)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc-CCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHH
Confidence 3999998888877776543 3899999999999876532211 111212122111 11 12366689999999998
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 232 ~s~ 234 (261)
T PRK08936 232 ASS 234 (261)
T ss_pred cCc
Confidence 864
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.02 Score=43.28 Aligned_cols=75 Identities=21% Similarity=0.177 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCC-----CCccHHHHHHHHcCCCCCCCCCceeehhhhHHH
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI-----LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 130 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 130 (216)
|+.+|...|.+++.++++. ++++..++|+.+.++-.... .......+..+..+ .| ...+...+|++++
T Consensus 155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~~~~~~~~va~~ 230 (263)
T PRK08226 155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA---IP-LRRLADPLEVGEL 230 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc---CC-CCCCCCHHHHHHH
Confidence 9999999999998887653 79999999999987642110 00111222233222 12 1125688999999
Q ss_pred HHHhhcC
Q 027969 131 HIRALEV 137 (216)
Q Consensus 131 ~~~~~~~ 137 (216)
+..++..
T Consensus 231 ~~~l~~~ 237 (263)
T PRK08226 231 AAFLASD 237 (263)
T ss_pred HHHHcCc
Confidence 9888853
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.024 Score=42.73 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+++.++.+ .++++++++|+.|+++.....+ .......+ .. ..+ ...+...+|+++++..+
T Consensus 165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~-~~--~~~-~~~~~~p~~~~~~~~~l 238 (258)
T PRK06949 165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--ETEQGQKL-VS--MLP-RKRVGKPEDLDGLLLLL 238 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--ChHHHHHH-Hh--cCC-CCCCcCHHHHHHHHHHH
Confidence 4999999999999887764 3899999999999987643211 11111111 11 111 12355579999999999
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 239 ~~~ 241 (258)
T PRK06949 239 AAD 241 (258)
T ss_pred hCh
Confidence 864
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.027 Score=42.79 Aligned_cols=110 Identities=19% Similarity=0.139 Sum_probs=64.9
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++++... +.-.++|++||.+...+.. ....|+.+|...|.+++..+.+
T Consensus 120 g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~----------------------~~~~Y~asK~a~~~l~~~la~e~~~ 177 (264)
T PRK07576 120 GTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP----------------------MQAHVCAAKAGVDMLTRTLALEWGP 177 (264)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECChhhccCCC----------------------CccHHHHHHHHHHHHHHHHHHHhhh
Confidence 456666666532 0115899999972222110 0133999999999999987654
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++++.++|+.+.+....... ............ ..+ ...+....|+|+++..++..
T Consensus 178 ~gi~v~~v~pg~~~~t~~~~~~-~~~~~~~~~~~~--~~~-~~~~~~~~dva~~~~~l~~~ 234 (264)
T PRK07576 178 EGIRVNSIVPGPIAGTEGMARL-APSPELQAAVAQ--SVP-LKRNGTKQDIANAALFLASD 234 (264)
T ss_pred cCeEEEEEecccccCcHHHhhc-ccCHHHHHHHHh--cCC-CCCCCCHHHHHHHHHHHcCh
Confidence 3799999999998753311100 000111111111 112 12356789999999999975
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.024 Score=42.65 Aligned_cols=75 Identities=19% Similarity=0.013 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 59 YSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
|+.||...+.+.+..+++ +|+++..++|+.+.+................+.+. .+ ...+...+|+++++..+
T Consensus 151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~va~~~~~l 226 (252)
T PRK07677 151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS---VP-LGRLGTPEEIAGLAYFL 226 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc---CC-CCCCCCHHHHHHHHHHH
Confidence 999999999998886654 38999999999997543211110112222233222 12 11356789999999888
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 227 ~~~ 229 (252)
T PRK07677 227 LSD 229 (252)
T ss_pred cCc
Confidence 764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0058 Score=46.08 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=58.8
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||....++... ...|+.+|...+.+++.++.+ .|+++.+++|+.+..+.
T Consensus 132 ~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 132 GKIINATSQAGVVGNPE----------------------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred CEEEEECccccccCCCC----------------------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 47999999744443211 123999999999988887764 38999999999997754
Q ss_pred CCCCC-------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 94 FQPIL-------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 94 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
..... .....+....... ..+ ...+...+|++.++..++...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~va~~~~~L~~~~ 238 (256)
T PRK08643 190 MFDIAHQVGENAGKPDEWGMEQFAK--DIT-LGRLSEPEDVANCVSFLAGPD 238 (256)
T ss_pred hhHHHhhhccccCCCchHHHHHHhc--cCC-CCCCcCHHHHHHHHHHHhCcc
Confidence 22100 0000000000011 011 112567899999999998643
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.013 Score=42.46 Aligned_cols=106 Identities=18% Similarity=0.093 Sum_probs=66.1
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--cC
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--NG 78 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~ 78 (216)
|+.++++++... .+-.+|+++||..+..+.. . . ..|+.+|...+.+.+.++.+ .+
T Consensus 89 ~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~----------~----~--------~~Y~~sK~a~~~~~~~la~e~~~g 146 (199)
T PRK07578 89 GQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP----------G----G--------ASAATVNGALEGFVKAAALELPRG 146 (199)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEcccccCCCCC----------C----c--------hHHHHHHHHHHHHHHHHHHHccCC
Confidence 456677766542 1224799998873222110 0 0 23999999999998887764 48
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
+++..++|+.+-.+.. ... ..++ ...++..+|+|+++..+++....+..++
T Consensus 147 i~v~~i~Pg~v~t~~~---------~~~------~~~~-~~~~~~~~~~a~~~~~~~~~~~~g~~~~ 197 (199)
T PRK07578 147 IRINVVSPTVLTESLE---------KYG------PFFP-GFEPVPAARVALAYVRSVEGAQTGEVYK 197 (199)
T ss_pred eEEEEEcCCcccCchh---------hhh------hcCC-CCCCCCHHHHHHHHHHHhccceeeEEec
Confidence 9999999998732210 000 0111 1236789999999999998654343443
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.052 Score=40.95 Aligned_cols=104 Identities=20% Similarity=0.147 Sum_probs=64.1
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+..+++++... .+..++|++||. ..+.... . ...|+.+|...|.+++.++++
T Consensus 129 ~~~~l~~~~~~~~~~~~~~~iv~~ss~-~~~~~~~---------~------------~~~Y~~sK~a~~~~~~~la~e~~ 186 (256)
T PRK12748 129 ATMLLSSAFAKQYDGKAGGRIINLTSG-QSLGPMP---------D------------ELAYAATKGAIEAFTKSLAPELA 186 (256)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEEECCc-cccCCCC---------C------------chHHHHHHHHHHHHHHHHHHHHH
Confidence 456677666431 133589999997 4443211 0 023999999999998887654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++++.++|+.+..+.... ........ ..+ ...+...+|+++++..++..
T Consensus 187 ~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~---~~~-~~~~~~~~~~a~~~~~l~~~ 238 (256)
T PRK12748 187 EKGITVNAVNPGPTDTGWITE------ELKHHLVP---KFP-QGRVGEPVDAARLIAFLVSE 238 (256)
T ss_pred HhCeEEEEEEeCcccCCCCCh------hHHHhhhc---cCC-CCCCcCHHHHHHHHHHHhCc
Confidence 38999999999876543211 11111111 111 11134579999999988865
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.031 Score=42.65 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCccCCCCCCCC----CccHHHHHHHHcCCCCCCCCCceeehhhhHHHH
Q 027969 59 YSLAKTLAEEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 131 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 131 (216)
|+.+|...+.+....+. ..++++++++|+.+.++...... ............. .....+..+|+|+++
T Consensus 151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vA~~~ 225 (272)
T PRK07832 151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-----FRGHAVTPEKAAEKI 225 (272)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-----cccCCCCHHHHHHHH
Confidence 99999988877766553 34899999999999877533210 0000001111000 111257899999999
Q ss_pred HHhhcC
Q 027969 132 IRALEV 137 (216)
Q Consensus 132 ~~~~~~ 137 (216)
+.++.+
T Consensus 226 ~~~~~~ 231 (272)
T PRK07832 226 LAGVEK 231 (272)
T ss_pred HHHHhc
Confidence 999964
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0067 Score=45.37 Aligned_cols=64 Identities=19% Similarity=0.219 Sum_probs=44.7
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--cCCcEE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--NGIDLV 82 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ 82 (216)
.+++.+.+. +..++|++||. ..+.... +...|+.+|...|.+++.++.+ .++++.
T Consensus 119 ~~~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~ 175 (243)
T PRK07023 119 ALAQAASDA-AERRILHISSG-AARNAYA---------------------GWSVYCATKAALDHHARAVALDANRALRIV 175 (243)
T ss_pred HHHHHhhcc-CCCEEEEEeCh-hhcCCCC---------------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 344444444 45689999997 4442111 0134999999999999988754 489999
Q ss_pred EEcCCCccC
Q 027969 83 AIHPGTVIG 91 (216)
Q Consensus 83 ilR~~~v~G 91 (216)
+++|+.+-.
T Consensus 176 ~v~pg~~~t 184 (243)
T PRK07023 176 SLAPGVVDT 184 (243)
T ss_pred EecCCcccc
Confidence 999998844
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.026 Score=42.81 Aligned_cols=96 Identities=13% Similarity=0.049 Sum_probs=58.7
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.+..++... . ..|+.+|...+.+.+.++.+ .|+++.+++|+.+..+-
T Consensus 130 g~ii~isS~~~~~~~~~--------------~--------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~ 187 (261)
T PRK08265 130 GAIVNFTSISAKFAQTG--------------R--------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV 187 (261)
T ss_pred cEEEEECchhhccCCCC--------------C--------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence 58999999755443211 1 23999999999999887764 38999999999886543
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
................. ...+ ...+...+|+|+++..++..
T Consensus 188 ~~~~~~~~~~~~~~~~~--~~~p-~~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 188 MDELSGGDRAKADRVAA--PFHL-LGRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred hhhhcccchhHHHHhhc--ccCC-CCCccCHHHHHHHHHHHcCc
Confidence 21100000001111111 1112 11245789999999999974
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.037 Score=41.91 Aligned_cols=74 Identities=22% Similarity=0.158 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...+.+++.++.+ +++++.+++|+.+..+..... ........+.... + ..-+...+|+++++..++
T Consensus 170 Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~~~~~~~~~~~~~---~-~~r~~~p~~va~~~~~l~ 243 (262)
T PRK07831 170 YAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--TSAELLDELAARE---A-FGRAAEPWEVANVIAFLA 243 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--cCHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHc
Confidence 999999999999998765 489999999999987753211 1122222222221 1 112556789999999988
Q ss_pred cCC
Q 027969 136 EVP 138 (216)
Q Consensus 136 ~~~ 138 (216)
...
T Consensus 244 s~~ 246 (262)
T PRK07831 244 SDY 246 (262)
T ss_pred Cch
Confidence 653
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0082 Score=44.78 Aligned_cols=63 Identities=16% Similarity=0.062 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHc----CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 59 YSLAKTLAEEAAWKFAKEN----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
|+.||...+.+++.++.+. ++++.+++||.|.++...... .+. ........+|++.++..+
T Consensus 160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~ 224 (239)
T PRK08703 160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PGE----AKSERKSYGDVLPAFVWW 224 (239)
T ss_pred hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CCC----CccccCCHHHHHHHHHHH
Confidence 9999999999998887754 589999999999887532110 111 112345788999999988
Q ss_pred hc
Q 027969 135 LE 136 (216)
Q Consensus 135 ~~ 136 (216)
+.
T Consensus 225 ~~ 226 (239)
T PRK08703 225 AS 226 (239)
T ss_pred hC
Confidence 86
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0064 Score=42.68 Aligned_cols=65 Identities=22% Similarity=0.259 Sum_probs=48.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.++++++.+. +.+++|++||.++.++... . ..|+.+|...+.++... +..++++
T Consensus 115 ~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~~~--------------~--------~~y~~sk~~~~~~~~~~-~~~~~~~ 170 (180)
T smart00822 115 GAWNLHELTRDL-PLDFFVLFSSVAGVLGNPG--------------Q--------ANYAAANAFLDALAAHR-RARGLPA 170 (180)
T ss_pred HHHHHHHHhccC-CcceEEEEccHHHhcCCCC--------------c--------hhhHHHHHHHHHHHHHH-HhcCCce
Confidence 567888888776 6688999999755554321 0 23999999999999554 4558999
Q ss_pred EEEcCCCcc
Q 027969 82 VAIHPGTVI 90 (216)
Q Consensus 82 ~ilR~~~v~ 90 (216)
+.+.|+.+-
T Consensus 171 ~~~~~g~~~ 179 (180)
T smart00822 171 TSINWGAWA 179 (180)
T ss_pred EEEeecccc
Confidence 999888764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.055 Score=40.74 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+++..++|+.|-.+..... ............ .+| ...+...+|++.++..++
T Consensus 156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~~~~~~~~~~---~~p-~~~~~~peeva~~~~~L~ 230 (251)
T PRK12481 156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RADTARNEAILE---RIP-ASRWGTPDDLAGPAIFLS 230 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccChHHHHHHHh---cCC-CCCCcCHHHHHHHHHHHh
Confidence 999999999999887764 489999999999965432110 001111111111 122 123567899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 231 s~ 232 (251)
T PRK12481 231 SS 232 (251)
T ss_pred Cc
Confidence 64
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0092 Score=46.64 Aligned_cols=66 Identities=23% Similarity=0.074 Sum_probs=44.2
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCccC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIG 91 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G 91 (216)
.++|++||.+..++... ...+.++.... +...|+.||+..+.+.++++++ .++.+..+.||.|-.
T Consensus 143 ~riv~vsS~~~~~~~~~----~~~~~~~~~~~------~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 143 ARVTSQSSIAARRGAIN----WDDLNWERSYA------GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred CCeEEEechhhcCCCcC----cccccccccCc------chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 47999999855554322 12222322211 1234999999999999988753 369999999999865
Q ss_pred C
Q 027969 92 P 92 (216)
Q Consensus 92 ~ 92 (216)
+
T Consensus 213 ~ 213 (313)
T PRK05854 213 N 213 (313)
T ss_pred C
Confidence 4
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.087 Score=39.14 Aligned_cols=75 Identities=12% Similarity=0.052 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhc
Q 027969 59 YSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 136 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 136 (216)
|+.||...|.+++.++++. ++++.+++|+.+.-.... ........... ..+ +. +...+|+++++..++.
T Consensus 148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-----~~~~~~~~~~~-~~~-~~--~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-----DAAYRQKALAK-SLL-KI--EPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-----CHHHHHHHhcc-Ccc-cc--CCCHHHHHHHHHHHhc
Confidence 9999999999999998764 589999999988432111 11111112111 111 11 3458999999999997
Q ss_pred CCCCCc
Q 027969 137 VPKASG 142 (216)
Q Consensus 137 ~~~~~~ 142 (216)
.....|
T Consensus 219 ~~~~~G 224 (236)
T PRK06483 219 SCYVTG 224 (236)
T ss_pred CCCcCC
Confidence 554455
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.011 Score=44.68 Aligned_cols=105 Identities=23% Similarity=0.145 Sum_probs=65.1
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..++|++||.+++++... ...|+.||...+.+.+.++.+
T Consensus 111 ~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~----------------------~~~Y~~sKaa~~~~~~~l~~~~ 167 (260)
T PRK08267 111 GVLNGAHAALPYLKAT-PGARVINTSSASAIYGQPG----------------------LAVYSATKFAVRGLTEALDLEW 167 (260)
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCCC----------------------chhhHHHHHHHHHHHHHHHHHh
Confidence 3455656553 33 4468999999856665321 023999999999988887653
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++++.+++|+.+-.+..... .......... ...-.+..+|+++++..+++.+
T Consensus 168 ~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~------~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 168 RRHGIRVADVMPLFVDTAMLDGT---SNEVDAGSTK------RLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred cccCcEEEEEecCCcCCcccccc---cchhhhhhHh------hccCCCCHHHHHHHHHHHHhCC
Confidence 379999999999865432210 0000000000 0111356799999999999653
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0051 Score=43.23 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=47.2
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC-cEE
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI-DLV 82 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ 82 (216)
..++++|++. +|++|+.+||. ..-.+. + ..|-..|-+.|+-+.+. .+ .++
T Consensus 112 l~~A~~AKe~-Gck~fvLvSS~-GAd~sS---------------r--------FlY~k~KGEvE~~v~eL----~F~~~~ 162 (238)
T KOG4039|consen 112 LQLAQAAKEK-GCKTFVLVSSA-GADPSS---------------R--------FLYMKMKGEVERDVIEL----DFKHII 162 (238)
T ss_pred HHHHHHHHhC-CCeEEEEEecc-CCCccc---------------c--------eeeeeccchhhhhhhhc----cccEEE
Confidence 4567778877 99999999997 322111 1 22889999999888766 34 678
Q ss_pred EEcCCCccCCCCCC
Q 027969 83 AIHPGTVIGPFFQP 96 (216)
Q Consensus 83 ilR~~~v~G~~~~~ 96 (216)
|+|||.+.|.....
T Consensus 163 i~RPG~ll~~R~es 176 (238)
T KOG4039|consen 163 ILRPGPLLGERTES 176 (238)
T ss_pred EecCcceecccccc
Confidence 99999999987644
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.07 Score=40.29 Aligned_cols=70 Identities=21% Similarity=0.128 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+.+.++++ .++.+..++|+.+-.+... .. +...... .++ ...+...+|+++++..+
T Consensus 167 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~~-~~~~~~~--~~~-~~~~~~~~d~a~~~~~l 236 (256)
T PRK12859 167 AYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------EE-IKQGLLP--MFP-FGRIGEPKDAARLIKFL 236 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------HH-HHHHHHh--cCC-CCCCcCHHHHHHHHHHH
Confidence 3999999999998887764 4899999999998554321 11 1111111 111 11245689999999998
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 237 ~s~ 239 (256)
T PRK12859 237 ASE 239 (256)
T ss_pred hCc
Confidence 864
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.012 Score=44.04 Aligned_cols=98 Identities=17% Similarity=0.136 Sum_probs=62.3
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ .+. +..+||++||....++... . ..|+.||...|.+++.+++..
T Consensus 127 g~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~~~~~~ 183 (247)
T PRK08945 127 ATFMLTQALLPLLLKS-PAASLVFTSSSVGRQGRAN--------------W--------GAYAVSKFATEGMMQVLADEY 183 (247)
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEEccHhhcCCCCC--------------C--------cccHHHHHHHHHHHHHHHHHh
Confidence 444555554 344 5679999999733332111 0 129999999999998887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++.+.+++|+.+-.+-... ..... ....+.-.+|++..+..++..
T Consensus 184 ~~~~i~~~~v~pg~v~t~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (247)
T PRK08945 184 QGTNLRVNCINPGGTRTAMRAS-----------AFPGE----DPQKLKTPEDIMPLYLYLMGD 231 (247)
T ss_pred cccCEEEEEEecCCccCcchhh-----------hcCcc----cccCCCCHHHHHHHHHHHhCc
Confidence 6888899999885532110 00000 112356679999999998854
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.036 Score=42.93 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=66.0
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++++... .+..+||++||. ..+.... ....|+.||...+.+.+.+..+
T Consensus 119 g~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaal~~~~~~l~~e~~~ 176 (296)
T PRK05872 119 GVFHTVRATLPALIERRGYVLQVSSL-AAFAAAP---------------------GMAAYCASKAGVEAFANALRLEVAH 176 (296)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCH-hhcCCCC---------------------CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566655431 122589999997 4332111 0023999999999999887643
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+.+.++.|+.+..+-..... ........+.... .. ....++..+|+++++..++...
T Consensus 177 ~gi~v~~v~Pg~v~T~~~~~~~-~~~~~~~~~~~~~-~~-p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 177 HGVTVGSAYLSWIDTDLVRDAD-ADLPAFRELRARL-PW-PLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HCcEEEEEecCcccchhhhhcc-ccchhHHHHHhhC-CC-cccCCCCHHHHHHHHHHHHhcC
Confidence 4899999999998665322111 0001122221111 11 1223567999999999999753
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.033 Score=43.93 Aligned_cols=72 Identities=22% Similarity=0.198 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.||...+.+.+.+..+ .++.++.+.|+.|..+......+ . .+... .....+.+.+|+|++++.
T Consensus 155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~~-~~~~~~~~pe~vA~~il~ 224 (330)
T PRK06139 155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRRL-TPPPPVYDPRRVAKAVVR 224 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------c-ccccc-cCCCCCCCHHHHHHHHHH
Confidence 3999999877777666543 37999999999997765321100 0 11100 012236789999999999
Q ss_pred hhcCCC
Q 027969 134 ALEVPK 139 (216)
Q Consensus 134 ~~~~~~ 139 (216)
+++++.
T Consensus 225 ~~~~~~ 230 (330)
T PRK06139 225 LADRPR 230 (330)
T ss_pred HHhCCC
Confidence 997654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.038 Score=41.62 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...+.+++.++++. |+++.+++|+.|-.+-... ........... .+ ...+...+|+|+++..++
T Consensus 161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~----~~~~~~~~~~~---~~-~~r~~~p~~va~~~~~L~ 232 (253)
T PRK05867 161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP----YTEYQPLWEPK---IP-LGRLGRPEELAGLYLYLA 232 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc----chHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHc
Confidence 9999999999999987653 8999999999996553221 11111111111 12 123567899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 233 s~ 234 (253)
T PRK05867 233 SE 234 (253)
T ss_pred Cc
Confidence 64
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.015 Score=43.95 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
.|+.||...+.+++.++++. |+++..++|+.|-.+-...... ............ ..+ ..-+...+|++.++.
T Consensus 157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~-~~r~~~~~~va~~~~ 233 (260)
T PRK07063 157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLA--LQP-MKRIGRPEEVAMTAV 233 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHh--cCC-CCCCCCHHHHHHHHH
Confidence 39999999999999987653 7999999999985543211000 000101111111 111 112556899999999
Q ss_pred HhhcC
Q 027969 133 RALEV 137 (216)
Q Consensus 133 ~~~~~ 137 (216)
+++..
T Consensus 234 fl~s~ 238 (260)
T PRK07063 234 FLASD 238 (260)
T ss_pred HHcCc
Confidence 99865
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.057 Score=40.87 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=64.0
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..++|++||..+.++... . ..|+.+|...+.+++.++.+
T Consensus 114 g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~--------~~Y~~sK~a~~~~~~~l~~~~~ 171 (263)
T PRK09072 114 APMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG--------------Y--------ASYCASKFALRGFSEALRRELA 171 (263)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC--------------c--------cHHHHHHHHHHHHHHHHHHHhc
Confidence 455666665431 13457899988744443211 1 23999999998888877754
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++.++++.|+.+..+.... ..... ... ........+|+|++++.+++++
T Consensus 172 ~~~i~v~~v~Pg~~~t~~~~~-------~~~~~-~~~----~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 172 DTGVRVLYLAPRATRTAMNSE-------AVQAL-NRA----LGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred ccCcEEEEEecCcccccchhh-------hcccc-ccc----ccCCCCCHHHHHHHHHHHHhCC
Confidence 37899999999885432110 00000 000 1224677899999999999875
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.092 Score=41.07 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHH-HHHHHHcCCCCCCCCCceeehhhhHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAE-VILNLINGDQSFAFPYIFVEIRDVVYAH 131 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 131 (216)
..|+.||+....+.+.++++ .++.++.++||.|.............. .+..+... ....+...++.++.+
T Consensus 187 ~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~l 261 (314)
T TIGR01289 187 KAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKY-----ITKGYVSEEEAGERL 261 (314)
T ss_pred hhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHH-----Hhccccchhhhhhhh
Confidence 34999999988888877664 379999999999964433211101100 01111000 112256788899988
Q ss_pred HHhhcCCC--CCceEEE
Q 027969 132 IRALEVPK--ASGRYLL 146 (216)
Q Consensus 132 ~~~~~~~~--~~~~~~~ 146 (216)
+.++.... ..|.|+.
T Consensus 262 ~~~~~~~~~~~~g~~~~ 278 (314)
T TIGR01289 262 AQVVSDPKLKKSGVYWS 278 (314)
T ss_pred HHhhcCcccCCCceeee
Confidence 88776532 2455543
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.024 Score=42.17 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=63.3
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH---H
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK---E 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~ 76 (216)
|+.++++++.+. .+..++|++||. ..+... . . ...|+.+|+..+.+.+.+.. .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~iv~~ss~-~~~~~~---------~------~------~~~y~~sk~a~~~~~~~~~~~~~~ 173 (237)
T PRK07326 116 GAFYTIKAAVPALKRGGGYIINISSL-AGTNFF---------A------G------GAAYNASKFGLVGFSEAAMLDLRQ 173 (237)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEECCh-hhccCC---------C------C------CchHHHHHHHHHHHHHHHHHHhcc
Confidence 344566665431 144689999997 333111 0 0 12399999999988887653 3
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
.|++++++||+.+..+...... .. .....+..+|+++.+..++..+.
T Consensus 174 ~gi~v~~v~pg~~~t~~~~~~~------------~~----~~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 174 YGIKVSTIMPGSVATHFNGHTP------------SE----KDAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred cCcEEEEEeeccccCccccccc------------ch----hhhccCCHHHHHHHHHHHHhCCc
Confidence 4899999999999765422100 00 01113678999999999997654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.021 Score=49.34 Aligned_cols=93 Identities=22% Similarity=0.189 Sum_probs=62.7
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+.+. +..+||++||. +.+.... .. ..|+.||...+.+++.++.+ .++++++
T Consensus 493 ~~~~~~~-~~g~iv~isS~-~~~~~~~-------------~~--------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~ 549 (657)
T PRK07201 493 LPHMRER-RFGHVVNVSSI-GVQTNAP-------------RF--------SAYVASKAALDAFSDVAASETLSDGITFTT 549 (657)
T ss_pred HHhhhhc-CCCEEEEECCh-hhcCCCC-------------Cc--------chHHHHHHHHHHHHHHHHHHHHhhCCcEEE
Confidence 3444444 55789999997 5553211 01 23999999999999887654 3899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++|+.|..+-..+.. . + .....+..+++|+.++.++...
T Consensus 550 v~pg~v~T~~~~~~~------------~---~-~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 550 IHMPLVRTPMIAPTK------------R---Y-NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred EECCcCcccccCccc------------c---c-cCCCCCCHHHHHHHHHHHHHhC
Confidence 999999765432110 0 0 1123567999999999987653
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.032 Score=43.15 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=59.7
Q ss_pred HHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEc
Q 027969 9 SCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIH 85 (216)
Q Consensus 9 ~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR 85 (216)
.+.+. +..++|++||. +.+.... +.. ..|+.||...+.+++.++.+ .++++.+++
T Consensus 164 ~~~~~-~~g~iv~isS~-~~~~~~~------------p~~--------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~ 221 (293)
T PRK05866 164 GMLER-GDGHIINVATW-GVLSEAS------------PLF--------SVYNASKAALSAVSRVIETEWGDRGVHSTTLY 221 (293)
T ss_pred HHHhc-CCcEEEEECCh-hhcCCCC------------CCc--------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEE
Confidence 33444 55789999997 5442110 001 23999999999988887654 389999999
Q ss_pred CCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 86 PGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 86 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+.|-.+-..+. ... .....+..+++|+.+..++.+.
T Consensus 222 pg~v~T~~~~~~-----------~~~-----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 222 YPLVATPMIAPT-----------KAY-----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred cCcccCcccccc-----------ccc-----cCCCCCCHHHHHHHHHHHHhcC
Confidence 997754432110 000 1122467899999999999764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.032 Score=42.22 Aligned_cols=112 Identities=15% Similarity=0.110 Sum_probs=65.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+..+++++. +. +..++|++||. ..+.... ....|+.+|...+.+.+.++.+.
T Consensus 106 ~~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sKaal~~~~~~la~e~ 162 (258)
T PRK06398 106 GIFLMSKYTIPYMLKQ-DKGVIINIASV-QSFAVTR---------------------NAAAYVTSKHAVLGLTRSIAVDY 162 (258)
T ss_pred HHHHHHHHHHHHHHHc-CCeEEEEeCcc-hhccCCC---------------------CCchhhhhHHHHHHHHHHHHHHh
Confidence 4455555553 33 44689999997 4432110 01239999999999999987764
Q ss_pred --CCcEEEEcCCCccCCCCCCCC----CccHHHHHHHHcC-CCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLING-DQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++++.+++|+.|-.+-..... ............. ....+ ...+...+|+|+++..++..
T Consensus 163 ~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~eva~~~~~l~s~ 228 (258)
T PRK06398 163 APTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHP-MKRVGKPEEVAYVVAFLASD 228 (258)
T ss_pred CCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCC-cCCCcCHHHHHHHHHHHcCc
Confidence 489999999988654321100 0000111110000 00111 12366799999999998864
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.11 Score=37.04 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=77.0
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 83 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 83 (216)
..|++..+.. ++.|++.+++.++.|-.+. ... .|++..|. .+|...+..+|.+ ........++|+-
T Consensus 86 ~~li~~l~~a-gv~RllVVGGAGSL~id~g----~rL--vD~p~fP~------ey~~~A~~~ae~L-~~Lr~~~~l~WTf 151 (211)
T COG2910 86 EALIEALKGA-GVPRLLVVGGAGSLEIDEG----TRL--VDTPDFPA------EYKPEALAQAEFL-DSLRAEKSLDWTF 151 (211)
T ss_pred HHHHHHHhhc-CCeeEEEEcCccceEEcCC----cee--ecCCCCch------hHHHHHHHHHHHH-HHHhhccCcceEE
Confidence 3477777777 8899999999877774432 111 22222232 3477777777754 3444444699999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKAS 141 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~ 141 (216)
+=|+..|-|+.... ....|+ .... ..-++|...|-|-+++--++++.-.
T Consensus 152 vSPaa~f~PGerTg---------~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~ 203 (211)
T COG2910 152 VSPAAFFEPGERTG---------NYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHI 203 (211)
T ss_pred eCcHHhcCCccccC---------ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccccc
Confidence 99999999976543 122233 3333 6668999999999999999886543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.038 Score=40.70 Aligned_cols=72 Identities=18% Similarity=0.153 Sum_probs=49.2
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-C
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-G 78 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~ 78 (216)
|+.++++++... .+-.++|++||...+++... . .+ ...|+.+|...+.+++.++.+. +
T Consensus 106 ~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----~---------~~------~~~Y~~sK~a~~~~~~~~~~~~~~ 166 (222)
T PRK06953 106 GPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT----G---------TT------GWLYRASKAALNDALRAASLQARH 166 (222)
T ss_pred hHHHHHHHHHHhhhccCCeEEEEcCccccccccc----C---------CC------ccccHHhHHHHHHHHHHHhhhccC
Confidence 566777777541 12246889888645554321 0 00 0139999999999999887654 7
Q ss_pred CcEEEEcCCCccCC
Q 027969 79 IDLVAIHPGTVIGP 92 (216)
Q Consensus 79 ~~~~ilR~~~v~G~ 92 (216)
+.+..++|+.+.-+
T Consensus 167 i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 167 ATCIALHPGWVRTD 180 (222)
T ss_pred cEEEEECCCeeecC
Confidence 89999999998654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.036 Score=42.05 Aligned_cols=113 Identities=16% Similarity=0.120 Sum_probs=64.3
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+..+++++... .+-.++|++||.++..+... ...|+.+|...+.+++.++.+
T Consensus 120 ~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~~ 177 (266)
T PRK06171 120 GVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG----------------------QSCYAATKAALNSFTRSWAKELG 177 (266)
T ss_pred hHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC----------------------CchhHHHHHHHHHHHHHHHHHhh
Confidence 455666666532 13357999999733332110 123999999999999888764
Q ss_pred -cCCcEEEEcCCCccCCCCCC-CC--------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQP-IL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.|+++.+++|+.+-...... .. .....-+..........| ...+...+|+|.++..++..
T Consensus 178 ~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~~~eva~~~~fl~s~ 247 (266)
T PRK06171 178 KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP-LGRSGKLSEVADLVCYLLSD 247 (266)
T ss_pred hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc-CCCCCCHHHhhhheeeeecc
Confidence 38999999999884222110 00 000011111111100122 11256779999999999864
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.034 Score=43.68 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+. |+++.+++|+.|-.+-.. .... ..-....+++|+.++..
T Consensus 207 ~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~------------~~~~------~~~~~~p~~~A~~~~~~ 268 (320)
T PLN02780 207 VYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS------------IRRS------SFLVPSSDGYARAALRW 268 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc------------ccCC------CCCCCCHHHHHHHHHHH
Confidence 49999999999998887653 899999999998543211 0001 11134678899999998
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 269 ~~~ 271 (320)
T PLN02780 269 VGY 271 (320)
T ss_pred hCC
Confidence 854
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.15 Score=39.08 Aligned_cols=76 Identities=17% Similarity=0.082 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCc-cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF-GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.||...+.+.+.++.+ .|+++..+.||.+-.+-....... .......+.. ..+ ..-+...+|+|+++..
T Consensus 168 ~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~---~~p-~~r~~~peeia~~~~f 243 (275)
T PRK06940 168 AYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA---KSP-AGRPGTPDEIAALAEF 243 (275)
T ss_pred hhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh---hCC-cccCCCHHHHHHHHHH
Confidence 4999999999998887664 379999999999976532111000 0111111111 112 1236778999999999
Q ss_pred hhcC
Q 027969 134 ALEV 137 (216)
Q Consensus 134 ~~~~ 137 (216)
++..
T Consensus 244 L~s~ 247 (275)
T PRK06940 244 LMGP 247 (275)
T ss_pred HcCc
Confidence 8854
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.057 Score=40.70 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.+|...|.+.+.++.+ .|+++..++|+.+-.+-..... ........+.+ .++ ..-+.-.+|+++++..++
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~-~~~~~~~~~~~---~~p-~~r~~~p~eva~~~~~l~ 232 (253)
T PRK08993 158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR-ADEQRSAEILD---RIP-AGRWGLPSDLMGPVVFLA 232 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc-cchHHHHHHHh---cCC-CCCCcCHHHHHHHHHHHh
Confidence 999999999999888765 4899999999999654321100 00111111111 122 112556899999999999
Q ss_pred cCC
Q 027969 136 EVP 138 (216)
Q Consensus 136 ~~~ 138 (216)
...
T Consensus 233 s~~ 235 (253)
T PRK08993 233 SSA 235 (253)
T ss_pred Ccc
Confidence 643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.052 Score=41.25 Aligned_cols=108 Identities=14% Similarity=0.112 Sum_probs=64.3
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++.++..+++. +..++|++||. ..+.... .. ..|+.+|...+.+.+..+++. |+
T Consensus 124 ~~~~l~~m~~~-~~g~Ii~isS~-~~~~~~~-------------~~--------~~y~asKaal~~l~~~la~el~~~gI 180 (263)
T PRK08339 124 TRALVPAMERK-GFGRIIYSTSV-AIKEPIP-------------NI--------ALSNVVRISMAGLVRTLAKELGPKGI 180 (263)
T ss_pred HHHHHHHHHHc-CCCEEEEEcCc-cccCCCC-------------cc--------hhhHHHHHHHHHHHHHHHHHhcccCe
Confidence 45566666555 44689999997 4331110 01 239999999999888887653 79
Q ss_pred cEEEEcCCCccCCCCCCC-------CCcc-HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 80 DLVAIHPGTVIGPFFQPI-------LNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++..+.|+.|-.+-.... .... ......+. . ..| ...+...+|++.++..++..
T Consensus 181 rVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~p-~~r~~~p~dva~~v~fL~s~ 242 (263)
T PRK08339 181 TVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA-K--PIP-LGRLGEPEEIGYLVAFLASD 242 (263)
T ss_pred EEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh-c--cCC-cccCcCHHHHHHHHHHHhcc
Confidence 999999999955421100 0000 01111111 1 112 12256789999999998864
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.41 Score=36.05 Aligned_cols=75 Identities=20% Similarity=0.113 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+ .|+++..|.|+.|-.+-..... ..........+. .| ...+...+|+++++..+
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~---~p-~~r~~~pedva~~~~~l 230 (252)
T PRK06079 156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-GHKDLLKESDSR---TV-DGVGVTIEEVGNTAAFL 230 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-ChHHHHHHHHhc---Cc-ccCCCCHHHHHHHHHHH
Confidence 3999999999999888764 3899999999999654221100 111222222111 12 12266789999999999
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 231 ~s~ 233 (252)
T PRK06079 231 LSD 233 (252)
T ss_pred hCc
Confidence 864
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.072 Score=40.35 Aligned_cols=109 Identities=13% Similarity=-0.029 Sum_probs=62.0
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+++. +..++|++||.++..+.. .. ..|+.+|...+.+.+..+.+ .|++
T Consensus 127 ~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------~~--------~~y~asKaal~~~~~~la~e~~~~gi~ 183 (265)
T PRK07062 127 RAFLPLLRAS-AAASIVCVNSLLALQPEP--------------HM--------VATSAARAGLLNLVKSLATELAPKGVR 183 (265)
T ss_pred HHHHHHHhcc-CCcEEEEeccccccCCCC--------------Cc--------hHhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 4445555554 446899999973222110 01 23999999988888776654 3899
Q ss_pred EEEEcCCCccCCCCCCCC------C-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 81 LVAIHPGTVIGPFFQPIL------N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+..++|+.|-.+...... . ....+...... ....+ ...+...+|++.++..++..
T Consensus 184 v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~r~~~p~~va~~~~~L~s~ 245 (265)
T PRK07062 184 VNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR-KKGIP-LGRLGRPDEAARALFFLASP 245 (265)
T ss_pred EEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh-cCCCC-cCCCCCHHHHHHHHHHHhCc
Confidence 999999998654321100 0 00111111110 01112 11356789999999998864
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.046 Score=43.37 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=48.2
Q ss_pred HHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 4 LNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 4 ~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
..|+++.. +. +.+++|.++|....- . +..++|-.+|...|.-+.......--
T Consensus 234 l~laq~f~~~~~~~-~~K~~vIvTSfn~~~-------------~----------s~~f~Yfk~K~~LE~dl~~~l~~~l~ 289 (410)
T PF08732_consen 234 LDLAQTFANDIKNT-GNKKLVIVTSFNNNA-------------I----------SSMFPYFKTKGELENDLQNLLPPKLK 289 (410)
T ss_pred HHHHHHhhhhhccC-CCceEEEEEecCcch-------------h----------hhhhhhhHHHHHHHHHHHhhcccccc
Confidence 45677666 55 778999999971111 0 01145999999999998776542223
Q ss_pred cEEEEcCCCccCCCCC
Q 027969 80 DLVAIHPGTVIGPFFQ 95 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~ 95 (216)
..+|+|||-+.|.+..
T Consensus 290 ~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 290 HLVILRPGPLVGEHGS 305 (410)
T ss_pred eEEEecCccccCCCCC
Confidence 7899999999998765
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.34 Score=36.76 Aligned_cols=74 Identities=16% Similarity=0.013 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+..+.+ +|+++..+.|+.|--+-... ..........+ ... .| ...+...+|+|+++.+++
T Consensus 160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~-~~~--~p-~~r~~~peevA~~v~~l~ 234 (261)
T PRK08690 160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IADFGKLLGHV-AAH--NP-LRRNVTIEEVGNTAAFLL 234 (261)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCchHHHHHHH-hhc--CC-CCCCCCHHHHHHHHHHHh
Confidence 999999999988877653 48999999999995542111 00111111111 111 12 112667899999999999
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 235 s~ 236 (261)
T PRK08690 235 SD 236 (261)
T ss_pred Cc
Confidence 74
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.077 Score=40.06 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
.|+.||...+.+++.++.+ .++.+..+.|+.|-.+-..... .........+... .+ ...+...+|+|++++
T Consensus 163 ~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~p~eva~~~~ 238 (256)
T TIGR01500 163 LYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQEL---KA-KGKLVDPKVSAQKLL 238 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHH---Hh-cCCCCCHHHHHHHHH
Confidence 3999999999999988765 3799999999998543211000 0000000000000 01 112677899999999
Q ss_pred HhhcC
Q 027969 133 RALEV 137 (216)
Q Consensus 133 ~~~~~ 137 (216)
.++++
T Consensus 239 ~l~~~ 243 (256)
T TIGR01500 239 SLLEK 243 (256)
T ss_pred HHHhc
Confidence 99853
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.23 Score=37.70 Aligned_cols=73 Identities=19% Similarity=0.123 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...|.+++.++.+ .|+++.+++|+.+..+...+ .......... .+........+|+++++..+
T Consensus 172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l 243 (267)
T TIGR02685 172 MYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FEVQEDYRRK---VPLGQREASAEQIADVVIFL 243 (267)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hhHHHHHHHh---CCCCcCCCCHHHHHHHHHHH
Confidence 3999999999999998765 48999999999986553211 1111111111 11111245789999999999
Q ss_pred hcCC
Q 027969 135 LEVP 138 (216)
Q Consensus 135 ~~~~ 138 (216)
+...
T Consensus 244 ~~~~ 247 (267)
T TIGR02685 244 VSPK 247 (267)
T ss_pred hCcc
Confidence 8653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.087 Score=44.64 Aligned_cols=100 Identities=18% Similarity=0.075 Sum_probs=57.7
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||. +.|.... ....|+.||...+.+++.++.+ .|+.+++++|+.|-.+-
T Consensus 445 g~iv~~sS~-~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 445 GHIVNVASA-AAYAPSR---------------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred cEEEEECCh-hhccCCC---------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 489999997 5553221 0123999999999988877654 38999999999985432
Q ss_pred CCCCC-CccHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 94 FQPIL-NFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 94 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
..... .....-........ ... ........+|+|++++.++.++.
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 503 VATTRFAGADAEDEARRRGRADKL-YQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred hhccccCCcccchhhhHHhhhhhh-ccccCCCHHHHHHHHHHHHHcCC
Confidence 21110 00000000000000 000 01112357999999999998643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.083 Score=39.98 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=64.5
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+..+++++.+. .+ .++|++||...+++... . ..|+.||...+.+++.++++.
T Consensus 118 ~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~--------------~--------~~Y~~sKaa~~~l~~~la~e~~ 174 (262)
T TIGR03325 118 GYLLAVKAALPALVASR-GSVIFTISNAGFYPNGG--------------G--------PLYTAAKHAVVGLVKELAFELA 174 (262)
T ss_pred hHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCC--------------C--------chhHHHHHHHHHHHHHHHHhhc
Confidence 455666666542 13 46888888734432110 0 239999999999999988764
Q ss_pred -CCcEEEEcCCCccCCCCCCCCCc-cHH-----HHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILNF-GAE-----VILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+++..+.|+.+..+-....... ... ......+. ..| ...+...+|+|+++..++..
T Consensus 175 ~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-~~r~~~p~eva~~~~~l~s~ 238 (262)
T TIGR03325 175 PYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS--VLP-IGRMPDAEEYTGAYVFFATR 238 (262)
T ss_pred cCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh--cCC-CCCCCChHHhhhheeeeecC
Confidence 48899999999975532210000 000 01111111 112 11256789999999988864
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.11 Score=38.32 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
|+.+|...+.+++.++++ .++.+..++|+.+-.+
T Consensus 147 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 147 YKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 999999999999988765 3689999999998554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.44 Score=36.09 Aligned_cols=74 Identities=16% Similarity=0.057 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+.+..+.|+.|-.+-... ............. ..| ...+...+|+|+++.+++
T Consensus 160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~~~~~~~~---~~p-~~r~~~pedva~~~~~L~ 234 (260)
T PRK06603 160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IGDFSTMLKSHAA---TAP-LKRNTTQEDVGGAAVYLF 234 (260)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CCCcHHHHHHHHh---cCC-cCCCCCHHHHHHHHHHHh
Confidence 999999999999888764 37999999999985542110 0011111111111 112 112567899999999999
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 235 s~ 236 (260)
T PRK06603 235 SE 236 (260)
T ss_pred Cc
Confidence 74
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.47 Score=35.15 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 59 YSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
|+.+|...+.+.+.++.+ .++.+..+.|+.+-.+-... .... .+ ...++..+|+|+++..
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~---~~-~~~~~~~~~~a~~~~~ 212 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQN---VP-KGKLFTPEYVAQCLLG 212 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----------hhhc---cc-cCCCCCHHHHHHHHHH
Confidence 999999999999888754 37888899999986554211 0011 11 1225689999999999
Q ss_pred hhcCC
Q 027969 134 ALEVP 138 (216)
Q Consensus 134 ~~~~~ 138 (216)
++...
T Consensus 213 l~~~~ 217 (235)
T PRK09009 213 IIANA 217 (235)
T ss_pred HHHcC
Confidence 99765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.42 Score=40.16 Aligned_cols=76 Identities=17% Similarity=0.123 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+.+.++.+ .++++..++|+.|-.+......... ......... .++ ...+...+|+++++..+
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~--~~~-~~~~~~~~~va~~v~~l 228 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAG-KLDPSAVRS--RIP-LGRLGRPEEIAEAVFFL 228 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccc-hhhhHHHHh--cCC-CCCCcCHHHHHHHHHHH
Confidence 3999999999998887765 3799999999988554321100000 000000000 111 11256789999999988
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 229 ~~~ 231 (520)
T PRK06484 229 ASD 231 (520)
T ss_pred hCc
Confidence 764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.15 Score=38.66 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCccCCCCCCCC--------CccHHHHHHHHcCCCCCCCCCceeehhhhH
Q 027969 59 YSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVV 128 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 128 (216)
|+.||...+.+++.++++. ++++..+.|+.|..+-..... ....... ..... ..| ..-+...+|++
T Consensus 156 Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~p-~~r~~~~~eva 231 (263)
T PRK06200 156 YTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA-DMIAA--ITP-LQFAPQPEDHT 231 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchh-HHhhc--CCC-CCCCCCHHHHh
Confidence 9999999999999987753 589999999999654321100 0000011 11111 111 12366789999
Q ss_pred HHHHHhhcCC
Q 027969 129 YAHIRALEVP 138 (216)
Q Consensus 129 ~~~~~~~~~~ 138 (216)
.++.+++...
T Consensus 232 ~~~~fl~s~~ 241 (263)
T PRK06200 232 GPYVLLASRR 241 (263)
T ss_pred hhhhheeccc
Confidence 9999998643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.45 Score=36.64 Aligned_cols=101 Identities=18% Similarity=0.131 Sum_probs=60.7
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||.++..+... . ..|+.||...+.+.+.++.+ .|+++..|.|+ +.- .
T Consensus 150 g~Iv~isS~~~~~~~~~--------------~--------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T-~ 205 (286)
T PRK07791 150 ARIINTSSGAGLQGSVG--------------Q--------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ART-R 205 (286)
T ss_pred cEEEEeCchhhCcCCCC--------------c--------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCC-C
Confidence 47999999744443211 0 23999999999998887664 48999999997 411 1
Q ss_pred CCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC--CCCce-EEEecCC
Q 027969 94 FQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP--KASGR-YLLAGSV 150 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~~ 150 (216)
. ........... .+ +...+...+|++++++.++... ...|. +.+.|+.
T Consensus 206 ~------~~~~~~~~~~~---~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 257 (286)
T PRK07791 206 M------TETVFAEMMAK---PEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257 (286)
T ss_pred c------chhhHHHHHhc---CcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence 1 11111111111 11 2234567999999999988642 23444 3444443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.1 Score=42.93 Aligned_cols=107 Identities=17% Similarity=0.013 Sum_probs=62.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... ..-.+||++||.+.+++... ...|+.+|...+.+++.++.+
T Consensus 318 g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~----------------------~~~Y~asKaal~~~~~~la~el~ 375 (450)
T PRK08261 318 APLRITEALLAAGALGDGGRIVGVSSISGIAGNRG----------------------QTNYAASKAGVIGLVQALAPLLA 375 (450)
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHHh
Confidence 566777777653 12258999999855543321 023999999888887776543
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++.+.++.|+.+-.+-.. ..+.......+....+. ...-..|+++++.+++..
T Consensus 376 ~~gi~v~~v~PG~i~t~~~~----~~~~~~~~~~~~~~~l~---~~~~p~dva~~~~~l~s~ 430 (450)
T PRK08261 376 ERGITINAVAPGFIETQMTA----AIPFATREAGRRMNSLQ---QGGLPVDVAETIAWLASP 430 (450)
T ss_pred hhCcEEEEEEeCcCcchhhh----ccchhHHHHHhhcCCcC---CCCCHHHHHHHHHHHhCh
Confidence 4899999999987432111 11111111111111111 122357999999998864
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.3 Score=38.26 Aligned_cols=84 Identities=23% Similarity=0.118 Sum_probs=53.7
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCc
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GID 80 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~ 80 (216)
|..|+..++..+. .|+|++||... ..... .+....|..... .....|+.||++......+++++. |+.
T Consensus 151 t~lLlp~lk~s~~-~RIV~vsS~~~-~~~~~---~~~l~~~~~~~~-----~~~~~Y~~SKla~~l~~~eL~k~l~~~V~ 220 (314)
T KOG1208|consen 151 TELLLPLLKRSAP-SRIVNVSSILG-GGKID---LKDLSGEKAKLY-----SSDAAYALSKLANVLLANELAKRLKKGVT 220 (314)
T ss_pred HHHHHHHHhhCCC-CCEEEEcCccc-cCccc---hhhccchhccCc-----cchhHHHHhHHHHHHHHHHHHHHhhcCce
Confidence 4567777777633 68999999733 11111 011112221100 011239999999999999998865 699
Q ss_pred EEEEcCCCccCCCCCC
Q 027969 81 LVAIHPGTVIGPFFQP 96 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~ 96 (216)
+..+.||.|.......
T Consensus 221 ~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 221 TYSVHPGVVKTTGLSR 236 (314)
T ss_pred EEEECCCcccccceec
Confidence 9999999998886543
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.18 Score=38.18 Aligned_cols=74 Identities=14% Similarity=0.054 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+++..+.|+.|-.+-.... .......... .. ..+ ...+...+|+++++..++
T Consensus 161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~-~~--~~p-~~r~~~p~~va~~~~~l~ 235 (257)
T PRK08594 161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GGFNSILKEI-EE--RAP-LRRTTTQEEVGDTAAFLF 235 (257)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-ccccHHHHHH-hh--cCC-ccccCCHHHHHHHHHHHc
Confidence 999999999999888764 379999999999865421100 0000111111 11 112 122567899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 236 s~ 237 (257)
T PRK08594 236 SD 237 (257)
T ss_pred Cc
Confidence 64
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.78 Score=34.66 Aligned_cols=75 Identities=19% Similarity=0.108 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+ .|+++..+.|+.|-.+-... .............. .+ ...+...+|++.++..+
T Consensus 161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---~p-~~r~~~p~dva~~~~~L 235 (258)
T PRK07533 161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-IDDFDALLEDAAER---AP-LRRLVDIDDVGAVAAFL 235 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc-cCCcHHHHHHHHhc---CC-cCCCCCHHHHHHHHHHH
Confidence 3999999999988887664 38999999999986543211 00111222222111 12 11256789999999999
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 236 ~s~ 238 (258)
T PRK07533 236 ASD 238 (258)
T ss_pred hCh
Confidence 864
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.28 Score=38.25 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
..|+.||+..+...+.++++ .|+.++.++||.|......... .. ...........++ ...+...++.|+.+.
T Consensus 183 ~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~pe~~a~~~~ 258 (308)
T PLN00015 183 KAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREH--IP-LFRLLFPPFQKYI-TKGYVSEEEAGKRLA 258 (308)
T ss_pred HHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccc--cH-HHHHHHHHHHHHH-hcccccHHHhhhhhh
Confidence 34999999988877777664 3799999999999654432211 11 1111000000001 112467899999988
Q ss_pred HhhcC
Q 027969 133 RALEV 137 (216)
Q Consensus 133 ~~~~~ 137 (216)
.++..
T Consensus 259 ~l~~~ 263 (308)
T PLN00015 259 QVVSD 263 (308)
T ss_pred hhccc
Confidence 87764
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.27 Score=37.10 Aligned_cols=77 Identities=10% Similarity=-0.080 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCC-------Cc-cHHHHHHHHcCCCCCCCCCceeehhh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL-------NF-GAEVILNLINGDQSFAFPYIFVEIRD 126 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~i~v~D 126 (216)
.|+.+|...+.+.+.++++. |+.+..+.|+.+-.+...... .. .......... ...| ..-+...+|
T Consensus 150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-~~r~~~p~d 226 (259)
T PRK08340 150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVL--ERTP-LKRTGRWEE 226 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHh--ccCC-ccCCCCHHH
Confidence 39999999999999988754 789999999988554321100 00 0000000000 1112 112567899
Q ss_pred hHHHHHHhhcC
Q 027969 127 VVYAHIRALEV 137 (216)
Q Consensus 127 ~a~~~~~~~~~ 137 (216)
+|+++.+++..
T Consensus 227 va~~~~fL~s~ 237 (259)
T PRK08340 227 LGSLIAFLLSE 237 (259)
T ss_pred HHHHHHHHcCc
Confidence 99999999874
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.29 Score=36.57 Aligned_cols=82 Identities=23% Similarity=0.230 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.+|...+.+++.++.+ .|+++-+|.|+.+..+..... .....+.....+. .| ...+...+|+|.++.+
T Consensus 146 ~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~---~p-l~r~~~~~evA~~v~f 220 (241)
T PF13561_consen 146 AYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKR---IP-LGRLGTPEEVANAVLF 220 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHH---ST-TSSHBEHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhh---hc-cCCCcCHHHHHHHHHH
Confidence 4999999999999887753 479999999999975431100 0011222222222 22 1225689999999999
Q ss_pred hhcCC--CCCceE
Q 027969 134 ALEVP--KASGRY 144 (216)
Q Consensus 134 ~~~~~--~~~~~~ 144 (216)
++... ...|..
T Consensus 221 L~s~~a~~itG~~ 233 (241)
T PF13561_consen 221 LASDAASYITGQV 233 (241)
T ss_dssp HHSGGGTTGTSEE
T ss_pred HhCccccCccCCe
Confidence 99754 344543
|
... |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.21 Score=37.85 Aligned_cols=74 Identities=18% Similarity=0.044 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+. |+.+..+.|+.|-.+-.... .........+.. ..+ ...+...+|++.++..++
T Consensus 161 Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~~~~~~~~---~~p-~~r~~~~~dva~~~~fl~ 235 (258)
T PRK07370 161 MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGILDMIHHVEE---KAP-LRRTVTQTEVGNTAAFLL 235 (258)
T ss_pred hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccchhhhhhhhh---cCC-cCcCCCHHHHHHHHHHHh
Confidence 9999999999999887653 79999999999965422110 001111111111 112 113556799999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 236 s~ 237 (258)
T PRK07370 236 SD 237 (258)
T ss_pred Ch
Confidence 64
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.36 Score=36.25 Aligned_cols=70 Identities=27% Similarity=0.340 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .++.+..+.|+.|..+-.. +.. +... ....+|+|++++.++
T Consensus 150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~---------------~~~--~~~~-~~~pe~~a~~~~~~~ 211 (246)
T PRK05599 150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT---------------GMK--PAPM-SVYPRDVAAAVVSAI 211 (246)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc---------------CCC--CCCC-CCCHHHHHHHHHHHH
Confidence 999999999988887765 3789999999998654211 100 0000 145899999999999
Q ss_pred cCCCCCceEEE
Q 027969 136 EVPKASGRYLL 146 (216)
Q Consensus 136 ~~~~~~~~~~~ 146 (216)
.++.....+..
T Consensus 212 ~~~~~~~~~~~ 222 (246)
T PRK05599 212 TSSKRSTTLWI 222 (246)
T ss_pred hcCCCCceEEe
Confidence 87654334433
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.39 Score=37.20 Aligned_cols=119 Identities=18% Similarity=0.136 Sum_probs=68.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
|++++-..+++ + .|+|++||+++ ... .+.. .+|+.||...|.......++ .|+
T Consensus 146 T~~~lpLlr~a-r-GRvVnvsS~~G---R~~-----------~p~~--------g~Y~~SK~aVeaf~D~lR~EL~~fGV 201 (322)
T KOG1610|consen 146 TKAFLPLLRRA-R-GRVVNVSSVLG---RVA-----------LPAL--------GPYCVSKFAVEAFSDSLRRELRPFGV 201 (322)
T ss_pred HHHHHHHHHhc-c-CeEEEeccccc---Ccc-----------Cccc--------ccchhhHHHHHHHHHHHHHHHHhcCc
Confidence 55666677776 4 48999999822 211 0011 23999999999988777654 499
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCC-----CCC--------------CCCceeehhhhHHHHHHhhcCCCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ-----SFA--------------FPYIFVEIRDVVYAHIRALEVPKA 140 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~~--------------~~~~~i~v~D~a~~~~~~~~~~~~ 140 (216)
++.++-|| +|-.+.... ......+..+++..+ .++ -......+..+.+++..++....+
T Consensus 202 ~VsiiePG-~f~T~l~~~-~~~~~~~~~~w~~l~~e~k~~YGedy~~~~~~~~~~~~~~~~~dls~v~~~~~hAlts~~P 279 (322)
T KOG1610|consen 202 KVSIIEPG-FFKTNLANP-EKLEKRMKEIWERLPQETKDEYGEDYFEDYKKSLEKYLSVASADLSPVVDCYEHALTSKHP 279 (322)
T ss_pred EEEEeccC-ccccccCCh-HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHhcCc
Confidence 99999999 544443221 122233333333220 111 011244566677777777766555
Q ss_pred CceEEEe
Q 027969 141 SGRYLLA 147 (216)
Q Consensus 141 ~~~~~~~ 147 (216)
..+|..+
T Consensus 280 r~RY~~g 286 (322)
T KOG1610|consen 280 RTRYSPG 286 (322)
T ss_pred chhcCcc
Confidence 5555443
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.38 Score=36.75 Aligned_cols=74 Identities=22% Similarity=0.129 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+..+.+. |+++..|.|+.|-.+-... ... ........... .| ...+...+|+|+++++++
T Consensus 159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~-~~~~~~~~~~~--~p-~~r~~~peeva~~~~fL~ 233 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGD-ARAIFSYQQRN--SP-LRRTVTIDEVGGSALYLL 233 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-Ccc-hHHHHHHHhhc--CC-ccccCCHHHHHHHHHHHh
Confidence 9999999999998887653 7999999999996643211 000 11111111111 12 112456899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 234 s~ 235 (271)
T PRK06505 234 SD 235 (271)
T ss_pred Cc
Confidence 64
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.28 Score=38.21 Aligned_cols=67 Identities=16% Similarity=0.049 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~ 134 (216)
|+.+|...+.+++.++.+ +|+.+.++.|+. ...... ..+ ....... .....+..+|++.++..+
T Consensus 168 Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~~------~~~----~~~~~~~~~~~~~~~pe~va~~v~~L 235 (306)
T PRK07792 168 YGAAKAGITALTLSAARALGRYGVRANAICPRA--RTAMTA------DVF----GDAPDVEAGGIDPLSPEHVVPLVQFL 235 (306)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCchhh------hhc----cccchhhhhccCCCCHHHHHHHHHHH
Confidence 999999999999887764 489999999962 111100 000 0000001 123346799999999888
Q ss_pred hcC
Q 027969 135 LEV 137 (216)
Q Consensus 135 ~~~ 137 (216)
+..
T Consensus 236 ~s~ 238 (306)
T PRK07792 236 ASP 238 (306)
T ss_pred cCc
Confidence 754
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.35 Score=34.55 Aligned_cols=63 Identities=22% Similarity=0.287 Sum_probs=48.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+|.++.... .++.||.+||+++++|... ...|+..-...+.+++...+ .+.++
T Consensus 115 g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~g----------------------q~~YaaAN~~lda~a~~~~~-~g~~~ 170 (181)
T PF08659_consen 115 GLWNLHEALENR-PLDFFILFSSISSLLGGPG----------------------QSAYAAANAFLDALARQRRS-RGLPA 170 (181)
T ss_dssp HHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TT----------------------BHHHHHHHHHHHHHHHHHHH-TTSEE
T ss_pred HHHHHHHHhhcC-CCCeEEEECChhHhccCcc----------------------hHhHHHHHHHHHHHHHHHHh-CCCCE
Confidence 678899988887 8899999999988887653 13499999999988876544 48998
Q ss_pred EEEcCCC
Q 027969 82 VAIHPGT 88 (216)
Q Consensus 82 ~ilR~~~ 88 (216)
+.+..+.
T Consensus 171 ~sI~wg~ 177 (181)
T PF08659_consen 171 VSINWGA 177 (181)
T ss_dssp EEEEE-E
T ss_pred EEEEccc
Confidence 8887553
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.45 Score=36.09 Aligned_cols=74 Identities=18% Similarity=0.045 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+++..+.|+.|-.+-... ..........+. . ..| ...+...+|+++++..++
T Consensus 159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~-~--~~p-~~r~~~pedva~~~~~l~ 233 (260)
T PRK06997 159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKDFGKILDFVE-S--NAP-LRRNVTIEEVGNVAAFLL 233 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccchhhHHHHHH-h--cCc-ccccCCHHHHHHHHHHHh
Confidence 999999999999988765 37999999999885432110 000011111111 1 112 112567899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 234 s~ 235 (260)
T PRK06997 234 SD 235 (260)
T ss_pred Cc
Confidence 74
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.45 Score=36.45 Aligned_cols=74 Identities=20% Similarity=0.124 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+++..+.|+.|-.+-... .... ........ ...| ..-+...+|++.++..++
T Consensus 157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~~~~--~~~p-l~r~~~pedva~~v~fL~ 231 (274)
T PRK08415 157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGDF-RMILKWNE--INAP-LKKNVSIEEVGNSGMYLL 231 (274)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cchh-hHHhhhhh--hhCc-hhccCCHHHHHHHHHHHh
Confidence 999999999999888764 37999999999986542110 0000 00001000 1112 112467899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 232 s~ 233 (274)
T PRK08415 232 SD 233 (274)
T ss_pred hh
Confidence 64
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.49 Score=34.92 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+.++.+ .|+++..+.|+.+..+.. ... .. .+ .-..+|+++++..++
T Consensus 140 Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------~~~--~~--~p----~~~~~~ia~~~~~l~ 200 (223)
T PRK05884 140 EAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------DGL--SR--TP----PPVAAEIARLALFLT 200 (223)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------hhc--cC--CC----CCCHHHHHHHHHHHc
Confidence 999999999999888764 379999999999853310 000 00 11 116899999999988
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 201 s~ 202 (223)
T PRK05884 201 TP 202 (223)
T ss_pred Cc
Confidence 64
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.59 Score=35.72 Aligned_cols=74 Identities=20% Similarity=0.071 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+.+..+.+ .++++.++.|+.|-.+-.... ... ......... ..| ...+...+|+|+++..++
T Consensus 162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~--~~p-~~r~~~peevA~~~~~L~ 236 (272)
T PRK08159 162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDF-RYILKWNEY--NAP-LRRTVTIEEVGDSALYLL 236 (272)
T ss_pred hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Ccc-hHHHHHHHh--CCc-ccccCCHHHHHHHHHHHh
Confidence 999999999999888765 379999999999865321110 000 011111111 122 112467899999999999
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 237 s~ 238 (272)
T PRK08159 237 SD 238 (272)
T ss_pred Cc
Confidence 64
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.83 Score=34.84 Aligned_cols=80 Identities=26% Similarity=0.294 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...|.+++.++.+. ++.+..+.|+.++... .......+.. ....+...+|++++++.+
T Consensus 163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~----------~~~~~~~~~~---~~~~~~~p~~va~~~~~l 229 (273)
T PRK08278 163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA----------AVRNLLGGDE---AMRRSRTPEIMADAAYEI 229 (273)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH----------HHHhcccccc---cccccCCHHHHHHHHHHH
Confidence 49999999999999987754 7999999998433211 1111111110 111356789999999999
Q ss_pred hcCCC--CCceEEEecCC
Q 027969 135 LEVPK--ASGRYLLAGSV 150 (216)
Q Consensus 135 ~~~~~--~~~~~~~~~~~ 150 (216)
+.... ..|.++..++.
T Consensus 230 ~~~~~~~~~G~~~~~~~~ 247 (273)
T PRK08278 230 LSRPAREFTGNFLIDEEV 247 (273)
T ss_pred hcCccccceeEEEeccch
Confidence 87543 34445544443
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.73 Score=34.74 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCC-------CccHHHHHHHHcCCCCCCCCCceeehhhhH
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGDQSFAFPYIFVEIRDVV 128 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 128 (216)
|+.+|...+.+.+..+.+ .|+++..+.|+.+-.+...... ......+..... .++ ...+...+|+|
T Consensus 153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~va 228 (259)
T PRK06125 153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLA---GLP-LGRPATPEEVA 228 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhc---cCC-cCCCcCHHHHH
Confidence 999999999998887653 3899999999998665311000 000011111111 112 12366899999
Q ss_pred HHHHHhhcC
Q 027969 129 YAHIRALEV 137 (216)
Q Consensus 129 ~~~~~~~~~ 137 (216)
+++..++..
T Consensus 229 ~~~~~l~~~ 237 (259)
T PRK06125 229 DLVAFLASP 237 (259)
T ss_pred HHHHHHcCc
Confidence 999999864
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.81 Score=33.95 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
|+.||...+.+.+..+.+ +++++..+.|+.+-.+
T Consensus 154 Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 154 VESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 999999999988887664 4899999999998665
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.97 E-value=1.1 Score=35.02 Aligned_cols=77 Identities=25% Similarity=0.194 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||.....+.+..+.+. |+++..|.|+.|--+-...........+..... . .+...-+...+|++.++..++
T Consensus 175 Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~--~p~~~~~~~peevA~~v~fL~ 251 (305)
T PRK08303 175 YDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-K--EPHFAISETPRYVGRAVAALA 251 (305)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-c--ccccccCCCHHHHHHHHHHHH
Confidence 9999999999988877643 799999999988433110000000000000000 0 110112346899999999998
Q ss_pred cCC
Q 027969 136 EVP 138 (216)
Q Consensus 136 ~~~ 138 (216)
...
T Consensus 252 s~~ 254 (305)
T PRK08303 252 ADP 254 (305)
T ss_pred cCc
Confidence 654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.68 E-value=3.5 Score=31.51 Aligned_cols=100 Identities=23% Similarity=0.286 Sum_probs=62.2
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHH---HHcCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA---KENGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~ 79 (216)
|..++.-..+. +-.++|.++|. +-+-+.+ .. ..|+.||...-.+-.... +..|+
T Consensus 123 T~~~lp~m~~~-~~G~IiNI~S~-ag~~p~p-------------~~--------avY~ATKa~v~~fSeaL~~EL~~~gV 179 (265)
T COG0300 123 TKAVLPGMVER-GAGHIINIGSA-AGLIPTP-------------YM--------AVYSATKAFVLSFSEALREELKGTGV 179 (265)
T ss_pred HHHHHHHHHhc-CCceEEEEech-hhcCCCc-------------ch--------HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 34455555555 44689999998 3332111 01 339999987665444433 34489
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC--CCCceeehhhhHHHHHHhhcCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA--FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.++.+.||.+.-+.... .+..... ...-++..+|+|+..+.++++.
T Consensus 180 ~V~~v~PG~~~T~f~~~-------------~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~ 227 (265)
T COG0300 180 KVTAVCPGPTRTEFFDA-------------KGSDVYLLSPGELVLSPEDVAEAALKALEKG 227 (265)
T ss_pred EEEEEecCccccccccc-------------cccccccccchhhccCHHHHHHHHHHHHhcC
Confidence 99999999886544320 1111111 2334788999999999999864
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.61 E-value=1.5 Score=33.35 Aligned_cols=74 Identities=18% Similarity=0.050 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+.||...+.+++..+.+ .++++..+.|+.|--+-... ............. ..+ ...+...+|++.++..++
T Consensus 159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~---~~p-~~r~~~pedva~~~~~L~ 233 (262)
T PRK07984 159 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKDFRKMLAHCEA---VTP-IRRTVTIEDVGNSAAFLC 233 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCchHHHHHHHHH---cCC-CcCCCCHHHHHHHHHHHc
Confidence 999999999999988775 37999999999885431110 0001111111111 112 112567899999999998
Q ss_pred cC
Q 027969 136 EV 137 (216)
Q Consensus 136 ~~ 137 (216)
..
T Consensus 234 s~ 235 (262)
T PRK07984 234 SD 235 (262)
T ss_pred Cc
Confidence 65
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.99 Score=34.71 Aligned_cols=64 Identities=23% Similarity=0.119 Sum_probs=40.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEE
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 82 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 82 (216)
|+.++-..++. +-.++|.+||+++..+.+. . +.|..||.+.+.+...+..+..-..+
T Consensus 130 Tk~alp~m~~r-~~GhIVvisSiaG~~~~P~--------~--------------~~Y~ASK~Al~~f~etLR~El~~~~~ 186 (282)
T KOG1205|consen 130 TKAALPSMKKR-NDGHIVVISSIAGKMPLPF--------R--------------SIYSASKHALEGFFETLRQELIPLGT 186 (282)
T ss_pred HHHHHHHhhhc-CCCeEEEEeccccccCCCc--------c--------------cccchHHHHHHHHHHHHHHHhhccCc
Confidence 34444455555 3358999999854443321 1 13999999999999998877643333
Q ss_pred E----EcCCCc
Q 027969 83 A----IHPGTV 89 (216)
Q Consensus 83 i----lR~~~v 89 (216)
+ +-||.|
T Consensus 187 ~i~i~V~PG~V 197 (282)
T KOG1205|consen 187 IIIILVSPGPI 197 (282)
T ss_pred eEEEEEecCce
Confidence 3 455555
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=89.15 E-value=2.4 Score=33.16 Aligned_cols=75 Identities=17% Similarity=0.010 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.||...+.+.+.++.+ .|+++..|-||.|--+-... .............. .+ ...+...+|++.+++.
T Consensus 192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~~~~~~---~p-l~r~~~peevA~~~~f 266 (303)
T PLN02730 192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDDMIEYSYAN---AP-LQKELTADEVGNAAAF 266 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccccHHHHHHHHhc---CC-CCCCcCHHHHHHHHHH
Confidence 3999999999999888764 36899999999886543211 10111111111111 12 1134678999999999
Q ss_pred hhcC
Q 027969 134 ALEV 137 (216)
Q Consensus 134 ~~~~ 137 (216)
++..
T Consensus 267 LaS~ 270 (303)
T PLN02730 267 LASP 270 (303)
T ss_pred HhCc
Confidence 9864
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=88.70 E-value=2.2 Score=32.15 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+..+.+ .|+++..+.|+.+-.+-... ............+. .+....+...+|+|+++..+
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---~p~~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA-IPGFELLEEGWDER---APLGWDVKDPTPVARAVVAL 232 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc-ccCcHHHHHHHHhc---CccccccCCHHHHHHHHHHH
Confidence 3999999999998887664 48999999999996543211 00111111111111 11111356789999999999
Q ss_pred hcCC
Q 027969 135 LEVP 138 (216)
Q Consensus 135 ~~~~ 138 (216)
+...
T Consensus 233 ~s~~ 236 (256)
T PRK07889 233 LSDW 236 (256)
T ss_pred hCcc
Confidence 8753
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=88.67 E-value=4.4 Score=31.37 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=65.9
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH------
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE------ 76 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------ 76 (216)
|+++|-...+. +-.++|-++|+++..|... - ..|+.||.++.-.-+.+..+
T Consensus 153 ~kaFLP~M~~~-~~GHIV~IaS~aG~~g~~g--------l--------------~~YcaSK~a~vGfhesL~~EL~~~~~ 209 (300)
T KOG1201|consen 153 TKAFLPKMLEN-NNGHIVTIASVAGLFGPAG--------L--------------ADYCASKFAAVGFHESLSMELRALGK 209 (300)
T ss_pred HHHHhHHHHhc-CCceEEEehhhhcccCCcc--------c--------------hhhhhhHHHHHHHHHHHHHHHHhcCC
Confidence 56667777765 3358999999866665432 0 22999999998776665532
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS 141 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 141 (216)
.|++.+.+.|+.+= .+ ++ .+...++.....+..+.+|+.++.++..+...
T Consensus 210 ~~IktTlv~P~~i~-Tg----------mf----~~~~~~~~l~P~L~p~~va~~Iv~ai~~n~~~ 259 (300)
T KOG1201|consen 210 DGIKTTLVCPYFIN-TG----------MF----DGATPFPTLAPLLEPEYVAKRIVEAILTNQAG 259 (300)
T ss_pred CCeeEEEEeeeecc-cc----------cc----CCCCCCccccCCCCHHHHHHHHHHHHHcCCcc
Confidence 26788888887772 11 11 11112224556888999999999999776543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=87.57 E-value=2 Score=43.16 Aligned_cols=67 Identities=22% Similarity=0.284 Sum_probs=51.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~ 80 (216)
|+.+|++++... ..++||++||.++.+|... ...|+.+|.....+.+.+..+. +++
T Consensus 2155 G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~g----------------------qs~YaaAkaaL~~la~~la~~~~~ir 2211 (2582)
T TIGR02813 2155 GLLSLLAALNAE-NIKLLALFSSAAGFYGNTG----------------------QSDYAMSNDILNKAALQLKALNPSAK 2211 (2582)
T ss_pred HHHHHHHHHHHh-CCCeEEEEechhhcCCCCC----------------------cHHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 678899998776 5578999999877776432 1239999999998888877664 688
Q ss_pred EEEEcCCCccC
Q 027969 81 LVAIHPGTVIG 91 (216)
Q Consensus 81 ~~ilR~~~v~G 91 (216)
+..+.++.+-|
T Consensus 2212 V~sI~wG~wdt 2222 (2582)
T TIGR02813 2212 VMSFNWGPWDG 2222 (2582)
T ss_pred EEEEECCeecC
Confidence 89999987754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.86 E-value=3.6 Score=30.56 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCcc
Q 027969 57 EWYSLAKTLAEEAAWKFAK---ENGIDLVAIHPGTVI 90 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~ 90 (216)
..|+.||.+.-...++.+- ..++-++.++||+|=
T Consensus 169 ~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 169 SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 4599999998888877653 237888999999993
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=85.61 E-value=2.9 Score=31.10 Aligned_cols=92 Identities=17% Similarity=0.109 Sum_probs=57.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-c-CCcEEEEcCCCccCCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-N-GIDLVAIHPGTVIGPFF 94 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~-~~~~~ilR~~~v~G~~~ 94 (216)
+.+|++||.+++-.... . ..|+.+|++-+.+.+..+.+ + ++.++.++||.| ....
T Consensus 138 ~~vVnvSS~aav~p~~~----------------w------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv-DT~m 194 (253)
T KOG1204|consen 138 GNVVNVSSLAAVRPFSS----------------W------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV-DTQM 194 (253)
T ss_pred CeEEEecchhhhccccH----------------H------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc-cchh
Confidence 67899999744443221 0 23999999999999887654 3 788899999887 3221
Q ss_pred CCC----CCccH---HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 95 QPI----LNFGA---EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 95 ~~~----~~~~~---~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
... ....+ .+++.+. ..-..+...+.++.+..+++..
T Consensus 195 q~~ir~~~~~~p~~l~~f~el~-------~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 195 QVCIRETSRMTPADLKMFKELK-------ESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHhhccCCCHHHHHHHHHHH-------hcCCcCChhhHHHHHHHHHHhc
Confidence 110 00111 1122221 1234777888899998888775
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=85.51 E-value=9.7 Score=29.84 Aligned_cols=108 Identities=20% Similarity=0.182 Sum_probs=65.4
Q ss_pred cHHHHHHHHhcc-CCcc---EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV-HSIK---RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK-- 75 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~---~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-- 75 (216)
||.|++.++... +... +++.+||..+.++-.. . +.|+.+|...--+.....+
T Consensus 146 gt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G----y------------------saYs~sK~alrgLa~~l~qE~ 203 (331)
T KOG1210|consen 146 GTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG----Y------------------SAYSPSKFALRGLAEALRQEL 203 (331)
T ss_pred hhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc----c------------------cccccHHHHHHHHHHHHHHHH
Confidence 677777766432 2222 7888888755554322 0 2277777776665555544
Q ss_pred -HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 76 -ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 76 -~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.+++.++..-|+.+--|+-.... ..-....++.. +..+-+-.+++|++++.-+.+.
T Consensus 204 i~~~v~Vt~~~P~~~~tpGfE~En-~tkP~~t~ii~------g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 204 IKYGVHVTLYYPPDTLTPGFEREN-KTKPEETKIIE------GGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred hhcceEEEEEcCCCCCCCcccccc-ccCchheeeec------CCCCCcCHHHHHHHHHhHHhhc
Confidence 33888889889888777633211 11111222222 4566788999999999888764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=85.50 E-value=4.2 Score=31.67 Aligned_cols=75 Identities=19% Similarity=0.015 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.||...+.+.+.++.+ +|+++..|.|+.+--+-... ........... ... .+ .......+|++.++..
T Consensus 191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~~~-~~~--~p-~~r~~~peevA~~v~~ 265 (299)
T PRK06300 191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA-IGFIERMVDYY-QDW--AP-LPEPMEAEQVGAAAAF 265 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc-ccccHHHHHHH-Hhc--CC-CCCCcCHHHHHHHHHH
Confidence 3999999999999888764 37999999999886543211 00011111111 111 12 1124578999999999
Q ss_pred hhcC
Q 027969 134 ALEV 137 (216)
Q Consensus 134 ~~~~ 137 (216)
++..
T Consensus 266 L~s~ 269 (299)
T PRK06300 266 LVSP 269 (299)
T ss_pred HhCc
Confidence 8864
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.00 E-value=8.2 Score=29.62 Aligned_cols=77 Identities=16% Similarity=0.115 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCCCCCceeehhhhHHHHH
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~ 132 (216)
|+.||...+++.+..+.+ +|+++-.+=|+.|..+-.... ..........+.. ...| ...+.-.+|++.++.
T Consensus 164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~--~~~~~~~~~~~~~~~~~~~p-~gr~g~~~eva~~~~ 240 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAG--LDDGEMEEFKEATDSKGAVP-LGRVGTPEEVAEAAA 240 (270)
T ss_pred chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccc--cccchhhHHhhhhccccccc-cCCccCHHHHHHhHH
Confidence 999999999999988754 489999999999887751110 1111111111111 1222 223566899999999
Q ss_pred HhhcCC
Q 027969 133 RALEVP 138 (216)
Q Consensus 133 ~~~~~~ 138 (216)
+++...
T Consensus 241 fla~~~ 246 (270)
T KOG0725|consen 241 FLASDD 246 (270)
T ss_pred hhcCcc
Confidence 888653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=82.75 E-value=4.5 Score=30.18 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCcc
Q 027969 59 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI 90 (216)
Q Consensus 59 Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 90 (216)
|+.||...+.+.+.++.+ .|+.+..+.|+.+-
T Consensus 156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 999999999988887744 48999999999543
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=81.85 E-value=9.1 Score=28.63 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=66.2
Q ss_pred cHHHHHHHHhccC--CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH-----H
Q 027969 2 GTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF-----A 74 (216)
Q Consensus 2 gt~~ll~~~~~~~--~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~-----~ 74 (216)
||.-.|....+.. .-.-+|.+||..+.++-+ ..|. |+.||.-.=-+-++. -
T Consensus 113 ~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p--------------~~pV--------Y~AsKaGVvgFTRSla~~ayy 170 (261)
T KOG4169|consen 113 GTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP--------------VFPV--------YAASKAGVVGFTRSLADLAYY 170 (261)
T ss_pred hhhhhhhhhhhhcCCCCcEEEEeccccccCccc--------------cchh--------hhhcccceeeeehhhhhhhhH
Confidence 5666677665531 113478888873333211 1222 888887554444442 2
Q ss_pred HHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHc-CC-CCCC-------CCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 75 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN-GD-QSFA-------FPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 75 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~-~~~~-------~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
++.|+.+..+.|+.+-- .+++.+-. +. ..+. ....-....+++..++.+++.+..+.+|.
T Consensus 171 ~~sGV~~~avCPG~t~t-----------~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~ 239 (261)
T KOG4169|consen 171 QRSGVRFNAVCPGFTRT-----------DLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPKNGAIWK 239 (261)
T ss_pred hhcCEEEEEECCCcchH-----------HHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhccCCcEEE
Confidence 34599999999987622 22333322 22 2221 11224457789999999999977677887
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+...
T Consensus 240 v~~g 243 (261)
T KOG4169|consen 240 VDSG 243 (261)
T ss_pred EecC
Confidence 7644
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 216 | ||||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 4e-25 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 2e-21 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 1e-13 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 4e-12 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 3e-10 |
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 216 | |||
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 7e-84 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 2e-83 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 3e-83 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 1e-65 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 2e-36 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 7e-31 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 3e-14 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 3e-10 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 3e-10 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 1e-09 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 4e-09 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 2e-08 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 4e-08 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 6e-08 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 1e-07 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 2e-06 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 4e-06 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 5e-06 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 7e-06 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 7e-06 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 8e-06 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 5e-05 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 7e-05 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 1e-04 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 2e-04 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 2e-04 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 6e-04 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 7e-04 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 8e-04 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 9e-04 |
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 7e-84
Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 12/223 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---W 58
G L +++SCA +++R+V TSS G + + E V DE+ +S+ C+ K
Sbjct: 106 GMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFCRAKKMTAWM 162
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFP 118
Y ++KTLAE+AAWK+AKEN ID + I P V+GPF + L+ I G+++
Sbjct: 163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI 222
Query: 119 YI---FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL--RSGKL 173
FV + D+ AHI E PKA GRY+ + D+ K LRE YP K
Sbjct: 223 IRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKG 282
Query: 174 EEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
++ ++ S ++ LG F E G +++ KG L
Sbjct: 283 VDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 2e-83
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---W 58
G +NV+++C + S+KRV+LTSS A+ +N+ +V+DE +++ K
Sbjct: 109 GVVNVMKACTRAKSVKRVILTSSAAAVTINQLD-GTGLVVDEKNWTDIEFLTSAKPPTWG 167
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-- 116
Y +KTLAE+AAWKFA+EN IDL+ + P + G + + ++LI G++
Sbjct: 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLING 227
Query: 117 --------FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL- 167
+ DV AHI E ASGRY+ + ++ KFL + YP
Sbjct: 228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYK 287
Query: 168 LRSGKLEEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
+ + + + + +S E+ G +F E +E KG L
Sbjct: 288 VPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 3e-83
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 12/223 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW--- 58
G L +L++C ++KR + TSS A+ N V+DE+ +S+ L + K +
Sbjct: 103 GALGILKACVNSKTVKRFIYTSSGSAVSFNGKD---KDVLDESDWSDVDLLRSVKPFGWN 159
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-- 116
Y+++KTLAE+A +F ++NGID+V + ++G F P L E L L+ G +
Sbjct: 160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV 219
Query: 117 FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL---LRSGKL 173
+ V + DV AHI LE GRY + + ++ + L YP
Sbjct: 220 TRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELK 279
Query: 174 EEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 215
E K ++ ++ G +F E I+ EKG+L
Sbjct: 280 EIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 1e-65
Identities = 66/232 (28%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS---------NPVLC 52
GTLN LR+ A S+KR VLTSS + L P + +DE ++ P
Sbjct: 110 GTLNALRAAAATPSVKRFVLTSSTVSA-LIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168
Query: 53 KENKEW-YSLAKTLAEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILNFG--AEVILN 107
+ W Y+ +KT AE AAWKF EN L A+ P IG F P G + +++
Sbjct: 169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS 228
Query: 108 LINGDQSFAFPYI----FVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFLRE 162
L NG+ S A + +V D+ H+ L +P+ R + +L R+
Sbjct: 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRK 288
Query: 163 HYPTLLRSGKLEEKYQPTIKV----SQERAKSLGI-NFTPWEVGVRGCIESL 209
YP+ ++ Q K S E KSLG + E ++ + S
Sbjct: 289 LYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-36
Identities = 43/248 (17%), Positives = 83/248 (33%), Gaps = 44/248 (17%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
T +C + + R++ S AM + E F + + ++ Y L
Sbjct: 105 QTNPFYAACLQ-ARVPRILYVGSAYAM----PRHPQGLPGHEGLFYDSLPSGKS--SYVL 157
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGP-FFQPILNFGAEVILNLINGDQSFAFPYI 120
K +E A + A+ G+ +V PG V+G P VI + NG+ +
Sbjct: 158 CKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTT---GRVITAIGNGEMTHYVAGQ 213
Query: 121 --FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREH----------YPTLL 168
++ + + ALE + RYLL G + +D+ + + E
Sbjct: 214 RNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMAR 273
Query: 169 RSGKLEEKY------QPTI------------KVSQERAKS-LG-INFTPWEVGVRGCIES 208
L P + + +A+ LG + T + + I+
Sbjct: 274 ALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDW 333
Query: 209 LMEKGFLS 216
+ G+ +
Sbjct: 334 FRDNGYFN 341
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 7e-31
Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 21/156 (13%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
L ++ K + R ++ G++ + P + + ++ + +
Sbjct: 91 VYLTIIDGVKK-AGVNRFLMVGGAGSL-----FIAPGLRLMDS-------GEVPENILPG 137
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-ILNFGAEVILNLINGDQSFAFPYI 120
K L E KE ID V P + P + G + ++ I G+
Sbjct: 138 VKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNS------- 190
Query: 121 FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDI 156
+ + D A I LE PK G + H
Sbjct: 191 HISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 3e-14
Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 33/196 (16%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
GT N+L AK H +++VV+ S+IG P TP + + P + +
Sbjct: 90 NGTYNILE-AAKQHRVEKVVIPSTIGVF----GPETPKNKVPSITITRP------RTMFG 138
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-------ILNFGAEVILN---LIN 110
+ K AE + ++ G+D+ ++ +I +P + +
Sbjct: 139 VTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCY 198
Query: 111 GDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR----YLLAGSVAQHSDILKFLREHYPT 166
+ A P +++ D + A + E + Y + S++ ++E P
Sbjct: 199 LAPNRALPMMYMP--DALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIP- 255
Query: 167 LLRSGKLEEKYQPTIK 182
+ E +Y+ +
Sbjct: 256 -----EFEIEYKEDFR 266
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 26/151 (17%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSI---GAMLLNETPMTPDVVIDETWFSNPVLCKENKE 57
+ T NVL A+ ++ VV SS G + + P E P+
Sbjct: 91 VATFNVLE-WARQTGVRTVVFASSSTVYG-----DADVIP---TPEEEPYKPISV----- 136
Query: 58 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP--ILNFGAEVILN----LING 111
Y AK E +A+ G+ +A+ V+GP + I +F ++ N + G
Sbjct: 137 -YGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLG 195
Query: 112 DQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142
D + Y++V D V A + A + +
Sbjct: 196 DGTQRKSYLYVR--DAVEATLAAWKKFEEMD 224
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-10
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 35/197 (17%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE-TPMTPDVVIDETWFSNPVLCKENKEWY 59
+VL + AK IK++ SSI TP I P Y
Sbjct: 96 NSLFHVL-NLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIM-----EPS------TVY 143
Query: 60 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-------ILNFGAEVILN---LI 109
++K E + G+D+ +I +I P ++ + I +
Sbjct: 144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYEC 203
Query: 110 NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHS----DILKFLREHYP 165
P ++++ D + A I ++ P + + ++A S +I +++H P
Sbjct: 204 FLSSETKMPMMYMD--DAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIP 261
Query: 166 TLLRSGKLEEKYQPTIK 182
+ Y+P +
Sbjct: 262 ------EFTITYEPDFR 272
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-09
Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 32/156 (20%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+ T N+ ++I +V S+ ++ P +E P L Y
Sbjct: 87 ILTQNLYD-ACYENNISNIVYAST--ISAYSDETSLP---WNEKELPLPDLM------YG 134
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP----------FFQPILNFGAEVILNLIN 110
++K E ++++ G+ + + + G FF+ + G ++ ++
Sbjct: 135 VSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFH-GEQLT---LH 190
Query: 111 GD--QSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 144
+ F ++ + D + I AL+ K SG +
Sbjct: 191 ANSVAKREF--LYAK--DAAKSVIYALKQEKVSGTF 222
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 54.4 bits (132), Expect = 4e-09
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+ T +L + K + R+V TS+ + + E + P E + ++P+ + Y
Sbjct: 92 LATYRLLEAMRK-AGVSRIVFTST--STVYGEAKVIP---TPEDYPTHPI----SL--YG 139
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP---------FFQPILNFGAEVILNLING 111
+K E + + VIG F + E+ I G
Sbjct: 140 ASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELE---ILG 196
Query: 112 DQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 144
+ YI++ D V A + L + +
Sbjct: 197 NGEQNKSYIYIS--DCVDAMLFGLRGDERVNIF 227
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 2e-08
Identities = 27/152 (17%), Positives = 45/152 (29%), Gaps = 35/152 (23%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPVLCKENKEWY 59
++L + +VV+ S+ E D + E +P Y
Sbjct: 97 DSGRHLLA-LCTSVGVPKVVVGST------CEVYGQADTLPTPEDSPLSPRSP------Y 143
Query: 60 SLAKTLAEEAAWKFAKENGIDLVAI-----------HPGTVIGPFFQPILNFGAEVILNL 108
+ +K E A + + V I P ++ +L E+
Sbjct: 144 AASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLT-RNELP--- 199
Query: 109 INGD--QSFAFPYIFVEIRDVVYAHIRALEVP 138
+ GD Q F Y I DVV + P
Sbjct: 200 VEGDGEQRRDFTY----ITDVVDKLVALANRP 227
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-08
Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 30/139 (21%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+G N+ A+ R+V SS + ID P Y
Sbjct: 88 IGAYNLYE-AARNLGKPRIVFASSNHTIGYYPR----TTRIDTEVPRRPD------SLYG 136
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI 120
L+K E+ A + + I+ + I G+ +
Sbjct: 137 LSKCFGEDLASLYYHKFDIETLNIRIGSCFPK-------------------PKDARMMAT 177
Query: 121 FVEIRDVVYAHIRALEVPK 139
++ + D + RA PK
Sbjct: 178 WLSVDDFMRLMKRAFVAPK 196
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 31/168 (18%), Positives = 49/168 (29%), Gaps = 36/168 (21%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSS---IGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 57
+ TL + +K+VV +++ I ++ T + D N
Sbjct: 128 LTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEET--DIVSLHNNDSP----- 180
Query: 58 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG--------AEVILNLI 109
YS++K E + + K++ + V V GP V I
Sbjct: 181 -YSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFI 239
Query: 110 -------------NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 144
G + F IFVE DV I G Y
Sbjct: 240 YKALKGMPLPLENGGVATRDF--IFVE--DVANGLIACAADGTPGGVY 283
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-07
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 11/92 (11%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+G N+ A+ H R+V SS + + + P Y
Sbjct: 89 IGLYNLYE-AARAHGQPRIVFASSNHTIGYYP----QTERLGPDVPARPDGL------YG 137
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 92
++K E A + + G + + G+
Sbjct: 138 VSKCFGENLARMYFDKFGQETALVRIGSCTPE 169
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-06
Identities = 41/227 (18%), Positives = 72/227 (31%), Gaps = 55/227 (24%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSS---IGAMLLNETPMTPDVVIDETWFSNPV-LCKENK 56
G LN+L + ++ +S G P + E P+
Sbjct: 131 DGFLNMLIAARD-AKVQSFTYAASSSTYG--------DHPGLPKVEDTIGKPLSP----- 176
Query: 57 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP--------------FFQPILNFGA 102
Y++ K + E A F++ G + + V G + ++ G
Sbjct: 177 --YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GD 233
Query: 103 EVILNLINGD--QSFAFPYIFVEIRDVVYAHIRALEVP-KASGRYLLAGSVAQHS--DIL 157
+V INGD S F Y I + V A++ A A + + S +
Sbjct: 234 DVY---INGDGETSRDFCY----IENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLF 286
Query: 158 KFLREHYPTLLRSGKLEEKYQPT----IKVSQ---ERAKSLGINFTP 197
LR+ S E Y+ ++ S +A L + + P
Sbjct: 287 FALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL-LGYAP 332
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-06
Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 35/165 (21%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
G + ++++ K +KR +L S+I + + + Y +
Sbjct: 85 GAVKLMQAAEK-AEVKRFILLSTIFS-----LQPEKWIGAGFDALKD----------YYI 128
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIF 121
AK A+ KE +D I PG + +++ EV
Sbjct: 129 AKHFADLYL---TKETNLDYTIIQPGALTEEEATGLIDINDEVS--------------AS 171
Query: 122 VEIRDVVYAHIRALEVPKASGRY--LLAGSVAQHSDILKFLREHY 164
I DV + + G+ + G A + L H+
Sbjct: 172 NTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESLLEHHH 216
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-06
Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 39/175 (22%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--- 57
+GTLNVL + + +V ++G TP++ I+E + + + +
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYG------TPNIDIEEGYITITHNGRTDTLPYP 185
Query: 58 -----WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD 112
+Y L+K K GI ++ G V G E + N ++ D
Sbjct: 186 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM--HEELRNRLDYD 243
Query: 113 QSFAF---PYI--------------------FVEIRDVVYAHIRALEVPKASGRY 144
F + +++IRD V A+ P +G +
Sbjct: 244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEF 298
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 7e-06
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 42/158 (26%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPVLCKENKEWY 59
+G LN+L +C + + ++++V S+ GA+ P+ +ETW P + Y
Sbjct: 95 LGGLNLLEACRQ-YGVEKLVFASTGGAIYGE----VPEGERAEETWPPRPK----SP--Y 143
Query: 60 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP-------------FFQPILNFGAEVIL 106
+ +K E + + G+ V++ G V GP F + +L G V
Sbjct: 144 AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLK-GLPVT- 201
Query: 107 NLINGDQSFAFP--------YIFVEIRDVVYAHIRALE 136
+ + P Y++V DV AH AL
Sbjct: 202 --LYARK---TPGDEGCVRDYVYVG--DVAEAHALALF 232
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 7e-06
Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 39/148 (26%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+VL + ++L+SSI A T P Y
Sbjct: 71 SYLDHVLDILTRNTKKPAILLSSSIQA-----TQDNP---------------------YG 104
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-----ILNFGAEVI----LNLING 111
+K E+ ++A+E G + + G + +P I F ++ + + +
Sbjct: 105 ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDR 164
Query: 112 DQSFAFPYIFVEIRDVVYAHIRALEVPK 139
+ Y + D+V RA+E
Sbjct: 165 NVELTLNY----VDDIVAEIKRAIEGTP 188
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 8e-06
Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 32/145 (22%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+G NV+++ K +++ R V + + P + NP Y+
Sbjct: 115 VGGSNVVQAAKK-NNVGRFVYFQTALCYGVKPIQQ-P---VRLDHPRNPANSS-----YA 164
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP---------FFQPILNFGAEVILNLING 111
++K+ E + + +G+D V V+GP FFQ + G + +
Sbjct: 165 ISKSANE----DYLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSE-GKKCFV----T 215
Query: 112 DQSFAFPYIFVEIRDVVYAHIRALE 136
F ++ +D+ A +RA++
Sbjct: 216 KARRDFVFV----KDLARATVRAVD 236
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-05
Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 30/158 (18%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
G N + AKV +K +V+ S+G PD +++ N +
Sbjct: 112 GQKNQID-AAKVAGVKHIVVVGSMGG-------TNPDHPLNKLGNGN----------ILV 153
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIF 121
K AE+ ++G I G ++ D+
Sbjct: 154 WKRKAEQY----LADSGTPYTIIRAGG----LLDKEGGVRELLVG---KDDELLQTDTKT 202
Query: 122 VEIRDVVYAHIRALEVPKASGR-YLLAGSVAQHSDILK 158
V DV I+AL +A + + L S K
Sbjct: 203 VPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 240
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 7e-05
Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 45/237 (18%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSS--IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 58
+ +L C + I + +S+ G I+ + P N
Sbjct: 142 QYSKELLHYCLE-REIPFLYASSAATYG--------GRTSDFIESREYEKP----LNV-- 186
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAI-----------HPGT---VIGPFFQPILNFGAEV 104
+ +K L +E + E +V H G+ V + N +
Sbjct: 187 FGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGES-- 244
Query: 105 ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQ-HSDILKFLREH 163
L G ++F +++V DV ++ LE SG + L A+ + +
Sbjct: 245 -PKLFEGSENFKRDFVYVG--DVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAY 300
Query: 164 YPTLL-----RSGKLEEKYQPTIKVSQERAKSLG--INFTPWEVGVRGCIESLMEKG 213
+ KL+ +YQ + ++ G F GV + L
Sbjct: 301 HKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 357
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 1e-04
Identities = 17/149 (11%), Positives = 47/149 (31%), Gaps = 20/149 (13%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
+++ R+++ ++ + + +++ +Y
Sbjct: 82 SLDHLIS-VLNGTVSPRLLVVGGAASL---QIDEDGNTLLESKGLREA-------PYYPT 130
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF-FQPILNFGAEVILNLINGDQSFAFPYI 120
A+ A++ + + I P + P G + +L +G+
Sbjct: 131 ARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNS------- 183
Query: 121 FVEIRDVVYAHIRALEVPKASG-RYLLAG 148
F+ + D A + +E P + +AG
Sbjct: 184 FISMEDYAIAVLDEIERPNHLNEHFTVAG 212
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 2e-04
Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 45/237 (18%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSS--IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 58
+ +L C + I + +S+ G I+ + P+ N
Sbjct: 95 QYSKELLHYCLE-REIPFLYASSAATYG--------GRTSDFIESREYEKPL----NV-- 139
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAI-----------HPGT---VIGPFFQPILNFGAEV 104
Y +K L +E + E +V H G+ V + N +
Sbjct: 140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGES-- 197
Query: 105 ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQ-HSDILKFLREH 163
L G ++F +++V DV ++ LE SG + L A+ + +
Sbjct: 198 -PKLFEGSENFKRDFVYVG--DVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAY 253
Query: 164 YPTLL-----RSGKLEEKYQPTIKVSQERAKSLG--INFTPWEVGVRGCIESLMEKG 213
+ KL+ +YQ + ++ G F GV + L
Sbjct: 254 HKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 310
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 24/143 (16%), Positives = 44/143 (30%), Gaps = 37/143 (25%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 61
G + ++ K IKR ++ SS+G +P N Y +
Sbjct: 110 GAIKTIQEAEK-RGIKRFIMVSSVGT-------------------VDPDQGPMNMRHYLV 149
Query: 62 AKTLAEEAAWKFAKENGIDLVAIHPGTVI-GPFFQPILNFGAEVILNLINGDQSFAFPYI 120
AK LA++ K + +D + PG + + ++ S I
Sbjct: 150 AKRLADDE----LKRSSLDYTIVRPGPLSNEESTGKV----------TVSPHFSEITRSI 195
Query: 121 FVEIRDVVYAHIRALEVPKASGR 143
DV ++ G+
Sbjct: 196 TRH--DVAKVIAELVDQQHTIGK 216
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 6e-04
Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 24/148 (16%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
G++NV ++ +K +KR++ + A+ P I + P Y
Sbjct: 114 QGSINVAKAASK-AGVKRLLNFQT--ALCYGRPATVP---IPIDSPTAPF----TS--YG 161
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG--AEVILNLINGDQSFAFP 118
++KT E F + + +V++ V GP I G L G + F
Sbjct: 162 ISKTAGE----AFLMMSDVPVVSLRLANVTGPR-LAI---GPIPTFYKRLKAGQKCFCSD 213
Query: 119 YI--FVEIRDVVYAHIRALEVPKASGRY 144
+ F+++ D + +L+ + +G +
Sbjct: 214 TVRDFLDMSDFLAIADLSLQEGRPTGVF 241
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 7e-04
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 34/164 (20%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKE-W 58
L ++R C K KR++ S+ +E M D DE SN ++ NK W
Sbjct: 411 EENLRIIRYCVKYR--KRIIFPST------SEVYGMCSDKYFDED-HSNLIVGPVNKPRW 461
Query: 59 -YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP----FFQPILNFG---AEVILNLIN 110
YS++K L + W + ++ G+ P +GP + ++ILNL+
Sbjct: 462 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE 521
Query: 111 ---------GDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGR 143
G Q F IRD + A R +E + G
Sbjct: 522 GSPIKLIDGGKQKRCFTD----IRDGIEALYRIIENAGNRCDGE 561
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 8e-04
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 5/93 (5%)
Query: 2 GTLNVLRSCAKVHSIKRVVLTSSIGA-MLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
GT ++R +K S+ + + T D I + V Y
Sbjct: 193 GTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGG-YG 250
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIH-PGTVIGP 92
+K E + + VA+ G ++
Sbjct: 251 TSKWAGEVLLREANDLCALP-VAVFRCGMILAD 282
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 38.4 bits (90), Expect = 9e-04
Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 49/224 (21%)
Query: 1 MGTLNVLRSCAKVHSIKRVVL--TSSI-GAMLLNETPMTPDVVIDETWFSNPV-LCKENK 56
G LN+L + ++ +SS G P + E NP+
Sbjct: 129 TGFLNILHAAKN-AQVQSFTYAASSSTYGD--------HPALPKVEENIGNPLSP----- 174
Query: 57 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP-------FFQPILNFGAEVILN-- 107
Y++ K + E A +A+ G + + V G + I + +L
Sbjct: 175 --YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKW-TAAMLKGD 231
Query: 108 --LINGD--QSFAFPYIFVEIRDVVYAHIRAL-EVPKASGRYLLAGSVAQHS--DILKFL 160
INGD S F YI +V+ +I + A + + ++ ++
Sbjct: 232 DVYINGDGETSRDFCYI----DNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYI 287
Query: 161 REHYPTLLRSGKLEEKYQPT----IKVSQ---ERAKSLGINFTP 197
+ + KL KY+ ++ SQ +A L + + P
Sbjct: 288 YDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDL-LKYRP 330
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 216 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.98 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.98 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.97 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.96 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.96 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.96 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.96 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.96 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.96 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.96 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.96 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.95 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.95 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.95 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.95 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.95 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.94 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.94 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.94 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.94 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.93 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.93 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.93 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.92 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.9 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.86 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.86 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.86 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.83 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.82 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.8 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.78 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.78 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.76 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.73 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.72 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.67 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.66 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.63 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.62 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.62 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.61 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.61 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.55 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.53 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.5 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.43 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.4 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.32 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.24 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.24 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.23 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.22 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.22 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.13 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.13 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.03 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.0 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.95 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.94 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.87 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.86 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.84 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.82 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.77 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.77 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.77 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.76 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.74 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.7 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.7 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.7 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.69 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.68 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.63 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.63 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.62 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.62 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.61 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.58 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.56 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.56 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.55 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.55 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.55 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.54 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.53 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.53 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.53 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.52 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.48 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.48 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.48 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.47 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.46 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.44 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.43 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.43 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.43 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.42 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.41 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.39 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.39 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.38 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.37 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.36 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.36 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.35 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.35 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.35 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.35 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.35 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.35 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.35 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.34 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.33 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.32 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.32 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.31 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.31 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.31 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.31 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.3 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.29 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.29 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.29 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.29 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.28 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.27 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.27 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.26 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.26 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.26 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.26 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.25 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.25 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.25 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.24 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.24 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.24 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.24 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.23 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.22 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.22 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.22 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.22 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.22 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.21 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.21 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.21 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.21 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.21 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.2 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.2 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.19 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.19 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.18 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.18 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.17 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.16 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.16 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.16 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.15 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.15 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.14 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.14 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.14 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.13 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.13 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.13 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.12 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.12 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.12 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.12 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.12 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.11 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.11 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.11 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.1 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.09 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.09 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.09 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.08 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.06 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.06 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.05 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.05 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.04 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.04 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.04 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.04 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.04 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.03 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.03 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.03 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.02 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.02 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.02 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.01 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.99 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.99 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.99 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 97.98 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.98 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.97 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.97 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.95 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 97.94 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.94 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.92 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.91 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.91 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.9 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.9 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.88 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.87 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.87 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.87 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.85 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.85 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.85 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 97.82 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.82 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.82 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.82 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.81 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.79 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.79 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.78 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.78 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.78 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.78 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.74 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.68 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.67 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.66 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.61 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.59 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.58 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.49 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.46 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.41 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.38 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.34 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.31 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.3 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.28 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.24 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.24 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.2 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.18 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.1 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.08 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.03 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 96.95 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 96.93 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 96.75 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 96.7 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 96.66 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.6 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.58 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 96.55 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 96.33 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.15 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.04 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 95.98 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 95.87 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 95.51 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 95.49 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 94.62 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 92.38 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 90.33 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 89.97 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 88.56 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 84.16 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 81.47 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=209.99 Aligned_cols=200 Identities=15% Similarity=0.154 Sum_probs=162.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. .+|+... ..+++|+++..|. +.|+.+|+.+|++++.++++.++++
T Consensus 88 ~~~~ll~a~~~~-~~~r~v~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~ 155 (311)
T 3m2p_A 88 LTQNLYDACYEN-NISNIVYASTI-SAYSDET----SLPWNEKELPLPD------LMYGVSKLACEHIGNIYSRKKGLCI 155 (311)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGCCCGG----GCSBCTTSCCCCS------SHHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEEccH-HHhCCCC----CCCCCCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCE
Confidence 689999999998 89999999997 9998765 6788999876665 5699999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++|||++..+. +....++..+..+. . .++ ..++|+|++|+|++++.+++++..++.|+++ ++.+|+.|
T Consensus 156 ~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e 234 (311)
T 3m2p_A 156 KNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYE 234 (311)
T ss_dssp EEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHH
T ss_pred EEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHH
Confidence 9999999999997654 35567777787787 3 333 5668999999999999999887766688776 77899999
Q ss_pred HHHHHHHhCCCCCCC--CCC-ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcCC
Q 027969 156 ILKFLREHYPTLLRS--GKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGF 214 (216)
Q Consensus 156 l~~~i~~~~~~~~~~--~~~-~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~~ 214 (216)
+++.+.+.++..... ... .........+|++|+ +.|||+| .+++++|+++++|+++.+-
T Consensus 235 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 298 (311)
T 3m2p_A 235 VANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDD 298 (311)
T ss_dssp HHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhccc
Confidence 999999999654211 111 133456778999999 6699999 6999999999999987653
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-32 Score=211.30 Aligned_cols=199 Identities=16% Similarity=0.171 Sum_probs=160.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ ++|+... ..+++|+++..+. +.|+.+|+.+|++++.++++.++++
T Consensus 130 ~~~~ll~a~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~ 197 (351)
T 3ruf_A 130 GFLNILHAAKNA-QVQSFTYAASS-STYGDHP----ALPKVEENIGNPL------SPYAVTKYVNEIYAQVYARTYGFKT 197 (351)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGGTTCC----CSSBCTTCCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHc-CCCEEEEEecH-HhcCCCC----CCCCccCCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCE
Confidence 689999999998 89999999997 9998776 6789999877655 5699999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-CCC-C---CCCceeehhhhHHHHHHhhcC--CCCCceEEEe-cCC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-QSF-A---FPYIFVEIRDVVYAHIRALEV--PKASGRYLLA-GSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~-~---~~~~~i~v~D~a~~~~~~~~~--~~~~~~~~~~-~~~ 150 (216)
+++||++|||++..+.. ..+..++..+..+. ..+ + ..++|+|++|+|++++.++.. ...+++|+++ ++.
T Consensus 198 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~ 277 (351)
T 3ruf_A 198 IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDR 277 (351)
T ss_dssp EEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC
T ss_pred EEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCc
Confidence 99999999999876531 23466777777777 322 2 456899999999999999987 2334588776 788
Q ss_pred CCHHHHHHHHHHhCCCCCCCCC-------CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 151 AQHSDILKFLREHYPTLLRSGK-------LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+|+.|+++.+.+.++....... ..........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 278 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 278 TTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp EEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999865221111 0123345678999999 7799999 79999999999999875
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=209.73 Aligned_cols=199 Identities=13% Similarity=0.126 Sum_probs=162.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. ++|+... ...+++|+++..+. +.|+.+|+.+|++++.+++..++++
T Consensus 128 ~~~~ll~a~~~~-~~~~~v~~SS~-~vy~~~~---~~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~ 196 (346)
T 4egb_A 128 GTVTLLELVKKY-PHIKLVQVSTD-EVYGSLG---KTGRFTEETPLAPN------SPYSSSKASADMIALAYYKTYQLPV 196 (346)
T ss_dssp HHHHHHHHHHHS-TTSEEEEEEEG-GGGCCCC---SSCCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHhc-CCCEEEEeCch-HHhCCCC---cCCCcCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCE
Confidence 689999999999 88999999997 9998763 15789999877655 5699999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++|||++..+. .....++..+..+. . .++ ..++|+|++|+|++++.+++.+..+++|+++ ++.+++.|
T Consensus 197 ~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e 275 (346)
T 4egb_A 197 IVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVE 275 (346)
T ss_dssp EEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHH
T ss_pred EEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHH
Confidence 9999999999987653 35567777788877 2 223 4568999999999999999887756688776 66799999
Q ss_pred HHHHHHHhCCCCCC-CCCC--ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 156 ILKFLREHYPTLLR-SGKL--EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 156 l~~~i~~~~~~~~~-~~~~--~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.+.+.++.... .... .........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 276 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 276 VVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp HHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 99999999865421 1110 123345567999999 7899999 79999999999999875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=206.64 Aligned_cols=198 Identities=18% Similarity=0.174 Sum_probs=157.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ .+|+... ..+++|+.+..+. +.|+.||..+|.+++.++++.++++
T Consensus 93 ~~~~l~~~~~~~-~~~~iv~~SS~-~vyg~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~g~~~ 160 (313)
T 3ehe_A 93 ATYRLLEAMRKA-GVSRIVFTSTS-TVYGEAK----VIPTPEDYPTHPI------SLYGASKLACEALIESYCHTFDMQA 160 (313)
T ss_dssp HHHHHHHHHHHH-TCCEEEEECCG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHc-CCCeEEEeCch-HHhCcCC----CCCCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 789999999998 88999999997 9998765 6788898766554 5699999999999999999889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++||++|||++... +.+..++..+..+. ..++ ..++|+|++|+|++++.+++....+++|+++ ++++|+.
T Consensus 161 ~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~ 238 (313)
T 3ehe_A 161 WIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVK 238 (313)
T ss_dssp EEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCCEEHH
T ss_pred EEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECCCCCeeHH
Confidence 999999999998764 34567777777764 2333 4568999999999999999855555688776 6789999
Q ss_pred HHHHHHHHhCCCCC---CCCCC--ccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 155 DILKFLREHYPTLL---RSGKL--EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 155 el~~~i~~~~~~~~---~~~~~--~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
|+++.+.+.++... .+... .........+|++|++.|||+| ++++++|+++++|+++++
T Consensus 239 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~~ 303 (313)
T 3ehe_A 239 RIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVEDL 303 (313)
T ss_dssp HHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCc
Confidence 99999999986432 11100 0222345679999997799999 899999999999998754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=206.18 Aligned_cols=199 Identities=18% Similarity=0.157 Sum_probs=159.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|++. ++++|||+||. ++|+... ..+++|+++..+. +.|+.||..+|++++.++++.++++
T Consensus 92 ~~~~l~~a~~~~-~~~~iv~~SS~-~vyg~~~----~~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~g~~~ 159 (312)
T 3ko8_A 92 ATFNVLEWARQT-GVRTVVFASSS-TVYGDAD----VIPTPEEEPYKPI------SVYGAAKAAGEVMCATYARLFGVRC 159 (312)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEeCcH-HHhCCCC----CCCCCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHhCCCE
Confidence 789999999998 88999999997 9998865 6789998766654 5699999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcC---C-CCCceEEEe-cCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEV---P-KASGRYLLA-GSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~---~-~~~~~~~~~-~~~ 150 (216)
+++||++|||++... +....++..+..+. ..++ ..++|+|++|+|++++.++++ + ..++.|+++ ++.
T Consensus 160 ~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~ 237 (312)
T 3ko8_A 160 LAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDA 237 (312)
T ss_dssp EEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred EEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence 999999999998654 24566777777764 2333 456899999999999999987 3 334578776 678
Q ss_pred CCHHHHHHHHHHhCCCCC----CCCCC----ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcCC
Q 027969 151 AQHSDILKFLREHYPTLL----RSGKL----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGF 214 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~----~~~~~----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~~ 214 (216)
+|+.|+++.+.+.++... ++... .........+|++|+ +.|||+| ++++++|+++++|++++++
T Consensus 238 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 238 VRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp EEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred eeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999985432 11110 122334578999999 8899999 7999999999999998865
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=202.96 Aligned_cols=198 Identities=17% Similarity=0.152 Sum_probs=162.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC-c
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI-D 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~ 80 (216)
||.+|+++|.+. ++++|||+||. .+|+... ..+++|+++..+. +.|+.+|+.+|++++.+++.+++ +
T Consensus 98 ~~~~ll~a~~~~-~v~~~v~~SS~-~v~~~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 165 (321)
T 3vps_A 98 SGRHLLALCTSV-GVPKVVVGSTC-EVYGQAD----TLPTPEDSPLSPR------SPYAASKVGLEMVAGAHQRASVAPE 165 (321)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHSSSSCE
T ss_pred HHHHHHHHHHHc-CCCeEEEecCH-HHhCCCC----CCCCCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHcCCCc
Confidence 689999999999 78999999997 9998875 6789999877655 56999999999999999988899 9
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
++++||++|||++.... .....++..+..+. ..++ ..++|+|++|+|++++.+++.+..+ .|+++ ++.+|+.
T Consensus 166 ~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~ 243 (321)
T 3vps_A 166 VGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-VVNFGSGQSLSVN 243 (321)
T ss_dssp EEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-EEEESCSCCEEHH
T ss_pred eEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-eEEecCCCcccHH
Confidence 99999999999987652 24566777777776 2333 4568999999999999999987765 88776 7789999
Q ss_pred HHHHHHHHhCCCCC-CC-CCCccCCCCccccchHHH-HHhCCee--eehhhhHHHHHHHHHHcCC
Q 027969 155 DILKFLREHYPTLL-RS-GKLEEKYQPTIKVSQERA-KSLGINF--TPWEVGVRGCIESLMEKGF 214 (216)
Q Consensus 155 el~~~i~~~~~~~~-~~-~~~~~~~~~~~~~d~~k~-~~lg~~~--~~~~~~i~~~~~~~~~~~~ 214 (216)
|+++.+. .++... +. ............+|++|+ +.|||+| ++++++|+++++|+++++.
T Consensus 244 e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 307 (321)
T 3vps_A 244 DVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL 307 (321)
T ss_dssp HHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 9999999 876431 10 011133445678999999 7799999 9999999999999998764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=202.49 Aligned_cols=204 Identities=19% Similarity=0.132 Sum_probs=156.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccch-hHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE-WYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|++. ++++|||+||. ++|+... ..+++|+++.... ..+.+ +|+.+|+.+|++++.+++..+++
T Consensus 92 gt~~ll~a~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~~~--~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~ 163 (319)
T 4b8w_A 92 MNDNVLHSAFEV-GARKVVSCLST-CIFPDKT----TYPIDETMIHNGP--PHNSNFGYSYAKRMIDVQNRAYFQQYGCT 163 (319)
T ss_dssp HHHHHHHHHHHT-TCSEEEEECCG-GGSCSSC----CSSBCGGGGGBSC--CCSSSHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHc-CCCeEEEEcch-hhcCCCC----CCCccccccccCC--CCCCcchHHHHHHHHHHHHHHHHHhhCCC
Confidence 789999999998 89999999997 9998765 6788888632111 11123 49999999999999999888999
Q ss_pred EEEEcCCCccCCCCCCCC---CccHHHHHH----HHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCC--CceEEE
Q 027969 81 LVAIHPGTVIGPFFQPIL---NFGAEVILN----LINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKA--SGRYLL 146 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~---~~~~~~~~~----~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~ 146 (216)
++++||++|||++..... ..++.++.. +..+. ..++ ..++|+|++|+|++++.+++++.. ++.|++
T Consensus 164 ~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni 243 (319)
T 4b8w_A 164 FTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSV 243 (319)
T ss_dssp EEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECC
T ss_pred EEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEe
Confidence 999999999999875421 233455555 56666 2233 456899999999999999987433 337866
Q ss_pred e-cCCCCHHHHHHHHHHhCCCCC-CCC-CCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 147 A-GSVAQHSDILKFLREHYPTLL-RSG-KLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 147 ~-~~~~s~~el~~~i~~~~~~~~-~~~-~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
+ ++.+|+.|+++.+.+.++... +.. ...........+|++|+ +.|||.| ++++++|+++++|++++.
T Consensus 244 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 244 GEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp CGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred cCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5 789999999999999996432 111 01122334568999999 7799999 999999999999998764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=200.57 Aligned_cols=212 Identities=33% Similarity=0.545 Sum_probs=155.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccc--cc-ccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL--CK-ENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~--~~-~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+|+++|.+..++++|||+||.+++|+... ...+++|+++..... .. .+.++|+.||.++|.+++.+.+.++
T Consensus 106 gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~---~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g 182 (337)
T 2c29_D 106 GMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH---QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENN 182 (337)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECCGGGTSCSSS---CCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCccEEEEeeeHhhcccCCC---CCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcC
Confidence 78999999998733899999999855776532 134678876544221 01 1234699999999999999887779
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC--CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHH
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSD 155 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e 155 (216)
++++++||++|||+..................|. ..+. ....|+|++|+|++++.+++.+...+.|+++++.+|+.|
T Consensus 183 i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e 262 (337)
T 2c29_D 183 IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILD 262 (337)
T ss_dssp CCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCTTCCEEEEECCEEEEHHH
T ss_pred CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCcccCceEEEeCCCCCHHH
Confidence 9999999999999986543211111111123444 2222 334599999999999999987666678888877789999
Q ss_pred HHHHHHHhCCCCCCCCCCc--cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 156 ILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 156 l~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+++.+.+.++...++.... ........+|++|++.|||+| ++++++++++++|+++.++++
T Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 326 (337)
T 2c29_D 263 LAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326 (337)
T ss_dssp HHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence 9999999886544443221 123345678999998899999 899999999999999998874
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=198.62 Aligned_cols=199 Identities=16% Similarity=0.122 Sum_probs=154.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC-Cc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG-ID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~ 80 (216)
||.+++++|++. ++++|||+||+ ++|+... ..+++|+.+..+. +.|+.||..+|++++.++++.+ ++
T Consensus 108 ~~~~l~~~~~~~-~~~~iv~~SS~-~~~g~~~----~~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 175 (341)
T 3enk_A 108 SLLSLLRVMRER-AVKRIVFSSSA-TVYGVPE----RSPIDETFPLSAT------NPYGQTKLMAEQILRDVEAADPSWR 175 (341)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGBCSCS----SSSBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHhC-CCCEEEEEecc-eEecCCC----CCCCCCCCCCCCC------ChhHHHHHHHHHHHHHHhhcCCCce
Confidence 688999999998 88999999997 9998765 6788998776554 5699999999999999988775 99
Q ss_pred EEEEcCCCccCCCCCCC--------CCccHHHHHHHHcCC-CCC-----------C-CCCceeehhhhHHHHHHhhcC--
Q 027969 81 LVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD-QSF-----------A-FPYIFVEIRDVVYAHIRALEV-- 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~-~~~-----------~-~~~~~i~v~D~a~~~~~~~~~-- 137 (216)
++++||++|||++.... ...+..++.....+. ..+ + ..++|+|++|+|++++.+++.
T Consensus 176 ~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 255 (341)
T 3enk_A 176 VATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALE 255 (341)
T ss_dssp EEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHH
T ss_pred EEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhh
Confidence 99999999999964211 123334555544443 221 1 446799999999999999976
Q ss_pred -CCCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCC---CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 138 -PKASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGK---LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 138 -~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~---~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
...+++|+++ ++.+|+.|+++.+.+.++... +.. ..........+|++|+ +.|||+| ++++++|+++++|++
T Consensus 256 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~ 334 (341)
T 3enk_A 256 RRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV-PYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQE 334 (341)
T ss_dssp HHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC-CEEEECCCTTCCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred cCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc-ceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 2345588776 788999999999999986431 111 1123345678999999 7899999 999999999999999
Q ss_pred HcC
Q 027969 211 EKG 213 (216)
Q Consensus 211 ~~~ 213 (216)
++.
T Consensus 335 ~~~ 337 (341)
T 3enk_A 335 NNP 337 (341)
T ss_dssp HST
T ss_pred hcC
Confidence 875
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=196.95 Aligned_cols=211 Identities=29% Similarity=0.412 Sum_probs=155.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccc--ccccch-hHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL--CKENKE-WYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~--~~~~~~-~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+++++|.+..++++|||+||.+++|+... ...+++|+++..... +..+.+ .|+.||.++|++++++.+.++
T Consensus 103 gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~---~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~g 179 (322)
T 2p4h_X 103 GALGILKACVNSKTVKRFIYTSSGSAVSFNGK---DKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNG 179 (322)
T ss_dssp HHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSS---CCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCccEEEEeccHHHcccCCC---CCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcC
Confidence 78999999988645789999999855665432 135788887654321 111222 499999999999999988789
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHH
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDI 156 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el 156 (216)
++++++||++|||+............+.....|. ..++ ...+|+|++|+|++++.+++.+...|.|+++++.+|+.|+
T Consensus 180 i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~s~~e~ 259 (322)
T 2p4h_X 180 IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEM 259 (322)
T ss_dssp CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEEEHHHH
T ss_pred CcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCCCHHHH
Confidence 9999999999999986542211112222334554 3344 4448999999999999999775555678877788999999
Q ss_pred HHHHHHhCCCCCCCCC--Cc-cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCC
Q 027969 157 LKFLREHYPTLLRSGK--LE-EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 157 ~~~i~~~~~~~~~~~~--~~-~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
++.+.+.++...+|.. .. ........+|++|+++|||+| ++++++|+++++|+++++++
T Consensus 260 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 322 (322)
T 2p4h_X 260 SQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322 (322)
T ss_dssp HHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence 9999998865555432 11 111135678999997799999 79999999999999998875
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=201.84 Aligned_cols=214 Identities=30% Similarity=0.469 Sum_probs=153.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccc--ccccch-hHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL--CKENKE-WYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~--~~~~~~-~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+++++|.+..++++|||+||.+++|+.... ....+++|+++..... +..+.. .|+.||.++|++++.+.+.++
T Consensus 109 gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g 187 (338)
T 2rh8_A 109 GVVNVMKACTRAKSVKRVILTSSAAAVTINQLD-GTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENN 187 (338)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHT-CSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcCEEEEEecHHHeecCCcC-CCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcC
Confidence 789999999987348999999998446654210 0023778886544321 111112 499999999999999887779
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---------CCCceeehhhhHHHHHHhhcCCCCCceEEEec
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---------FPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 148 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 148 (216)
++++++||++|||+............+.....|. ..++ +.++|+|++|+|++++.+++.+...+.|++++
T Consensus 188 i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ 267 (338)
T 2rh8_A 188 IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCA 267 (338)
T ss_dssp CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECS
T ss_pred CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEec
Confidence 9999999999999986543222222222233443 2111 23489999999999999998766567888887
Q ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCcc-CCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 149 SVAQHSDILKFLREHYPTLLRSGKLEE-KYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 149 ~~~s~~el~~~i~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
+.+|+.|+++.+.+.++...+|..... .......+|++|+++|||+| ++++++++++++|+++.++++
T Consensus 268 ~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~ 337 (338)
T 2rh8_A 268 ANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337 (338)
T ss_dssp EEECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 779999999999998865444432211 11123688999997799999 799999999999999998874
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=201.42 Aligned_cols=201 Identities=20% Similarity=0.174 Sum_probs=157.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ ++|+... ....+++|+++..+. +.|+.+|+.+|++++.+++..++++
T Consensus 105 ~~~~ll~a~~~~-~~~~~V~~SS~-~vyg~~~--~~~~~~~E~~~~~~~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 174 (347)
T 4id9_A 105 GTRRLLDAASAA-GVRRFVFASSG-EVYPENR--PEFLPVTEDHPLCPN------SPYGLTKLLGEELVRFHQRSGAMET 174 (347)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGTTTTS--CSSSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred HHHHHHHHHHHc-CCCeEEEECCH-HHhCCCC--CCCCCcCCCCCCCCC------ChHHHHHHHHHHHHHHHHHhcCCce
Confidence 789999999998 89999999997 9998731 116789999876654 5699999999999999999889999
Q ss_pred EEEcCCCcc-------------CCCCCCC----------CCccHHHHHHHHcCCC--CCC---CCCce----eehhhhHH
Q 027969 82 VAIHPGTVI-------------GPFFQPI----------LNFGAEVILNLINGDQ--SFA---FPYIF----VEIRDVVY 129 (216)
Q Consensus 82 ~ilR~~~v~-------------G~~~~~~----------~~~~~~~~~~~~~~~~--~~~---~~~~~----i~v~D~a~ 129 (216)
+++||++|| |++.... ...+..++..+..+.+ .++ ..++| +|++|+|+
T Consensus 175 ~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ 254 (347)
T 4id9_A 175 VILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVA 254 (347)
T ss_dssp EEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHH
T ss_pred EEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHH
Confidence 999999999 7764321 1234456666666662 222 45678 99999999
Q ss_pred HHHHhhcCC-CCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHH
Q 027969 130 AHIRALEVP-KASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 205 (216)
Q Consensus 130 ~~~~~~~~~-~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~ 205 (216)
+++.+++.+ ..+++|+++ ++.+|+.|+++.+.+.++... +....+.......+|++|+ +.|||+| ++++++|+++
T Consensus 255 ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~ 333 (347)
T 4id9_A 255 GILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDFPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEA 333 (347)
T ss_dssp HHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEECSSCCCBCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred HHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 999999987 345588776 778999999999999986432 1111112223678999999 7799999 7999999999
Q ss_pred HHHHHHcC
Q 027969 206 IESLMEKG 213 (216)
Q Consensus 206 ~~~~~~~~ 213 (216)
++|++++.
T Consensus 334 ~~~~~~~~ 341 (347)
T 4id9_A 334 ATARRQRL 341 (347)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhh
Confidence 99998753
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=196.47 Aligned_cols=199 Identities=18% Similarity=0.135 Sum_probs=156.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. ++|+... ..+++|+++..+. +.|+.+|..+|.+++.++++.++++
T Consensus 132 ~~~~l~~a~~~~-~~~~~v~~SS~-~~~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~g~~~ 199 (352)
T 1sb8_A 132 GFLNMLIAARDA-KVQSFTYAASS-STYGDHP----GLPKVEDTIGKPL------SPYAVTKYVNELYADVFSRCYGFST 199 (352)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGGTTCC----CSSBCTTCCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHc-CCCEEEEeccH-HhcCCCC----CCCCCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 689999999998 88999999997 9998764 5688898876554 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-CC-CC---CCCceeehhhhHHHHHHhhcCC--CCCceEEEe-cCC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-QS-FA---FPYIFVEIRDVVYAHIRALEVP--KASGRYLLA-GSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~-~~---~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~~-~~~ 150 (216)
+++||++|||+...+.. .....++..+..+. .. ++ ..++|+|++|+|++++.++... ..+++|+++ ++.
T Consensus 200 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~ 279 (352)
T 1sb8_A 200 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR 279 (352)
T ss_dssp EEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC
T ss_pred EEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCC
Confidence 99999999999875431 23455667777776 22 22 3458999999999999998762 234588776 678
Q ss_pred CCHHHHHHHHHHhC---CCCCC--CCCCc--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 151 AQHSDILKFLREHY---PTLLR--SGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 151 ~s~~el~~~i~~~~---~~~~~--~~~~~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+|+.|+++.+.+.+ +.... +.... ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 280 ~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 280 TSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp EEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999998 53321 11111 12234567899999 7799999 89999999999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=196.15 Aligned_cols=196 Identities=21% Similarity=0.265 Sum_probs=153.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccC-CCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLN-ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~-~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+. ++++||++||.+++|+. .. ..+++|+++..+. +.|+.||..+|.+++.++++.+++
T Consensus 96 g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~ 164 (311)
T 2p5y_A 96 GGLNLLEACRQY-GVEKLVFASTGGAIYGEVPE----GERAEETWPPRPK------SPYAASKAAFEHYLSVYGQSYGLK 164 (311)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCT----TCCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCC----CCCcCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHcCCC
Confidence 689999999988 88999999996588876 33 4678888765544 569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC--CCC-----C---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-
Q 027969 81 LVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD--QSF-----A---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA- 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~--~~~-----~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~- 147 (216)
++++||++|||++..... .....++..+..+. ..+ + ..++|+|++|+|++++.+++.+ ++.|+++
T Consensus 165 ~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~i~~ 242 (311)
T 2p5y_A 165 WVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL--EGIYNVGT 242 (311)
T ss_dssp EEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC--CEEEEESC
T ss_pred EEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC--CCEEEeCC
Confidence 999999999999865432 12345566666666 223 3 3458999999999999999764 5688776
Q ss_pred cCCCCHHHHHHHHHHhCCCCC----CCCCCccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHc
Q 027969 148 GSVAQHSDILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+..+|+.|+++.+.+.++... .+.. ........+|++|++.|||+| ++++++++++++|++++
T Consensus 243 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 243 GEGHTTREVLMAVAEAAGKAPEVQPAPPR--PGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp SCCEEHHHHHHHHHHHHTCCCCEEEECCC--TTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHHHhCCCCCceeCCCC--ccchhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence 678999999999999886431 1111 122345789999993399999 99999999999999753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=196.08 Aligned_cols=198 Identities=16% Similarity=0.173 Sum_probs=155.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|.+. ++++|||+||. ++||... ..+++|+++..+. +.|+.||..+|++++.+++..++++
T Consensus 106 ~~~~l~~a~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~g~~~ 173 (337)
T 1r6d_A 106 GTQTLLQCAVDA-GVGRVVHVSTN-QVYGSID----SGSWTESSPLEPN------SPYAASKAGSDLVARAYHRTYGLDV 173 (337)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGGCCCS----SSCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHc-CCCEEEEecch-HHhCCCC----CCCCCCCCCCCCC------CchHHHHHHHHHHHHHHHHHHCCCE
Confidence 789999999998 88999999997 9998764 5678888765544 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++|||+...+. +....++..+..+. ..++ ..++|+|++|+|++++.+++.+..++.|+++ +..+|+.|
T Consensus 174 ~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e 252 (337)
T 1r6d_A 174 RITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRE 252 (337)
T ss_dssp EEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHH
T ss_pred EEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHH
Confidence 9999999999987542 24456677777776 2223 3458999999999999999876555588776 56799999
Q ss_pred HHHHHHHhCCCCC--CCCCC-ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 156 ILKFLREHYPTLL--RSGKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 156 l~~~i~~~~~~~~--~~~~~-~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.+.+.++... +.... .........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 253 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 253 LTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp HHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999986531 11000 011223456899999 7799999 89999999999999764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=194.97 Aligned_cols=198 Identities=20% Similarity=0.194 Sum_probs=154.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCC--CCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE--TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~--~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|.+.+++++|||+||. ++|+.. . ..+++|+++..+. +.|+.||..+|.+++.++++.++
T Consensus 104 g~~~l~~a~~~~~~~~~iv~~SS~-~v~g~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~E~~~~~~~~~~gi 172 (321)
T 2pk3_A 104 GTLHVLDAVRDSNLDCRILTIGSS-EEYGMILPE----ESPVSEENQLRPM------SPYGVSKASVGMLARQYVKAYGM 172 (321)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEEEG-GGTBSCCGG----GCSBCTTSCCBCC------SHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCeEEEEccH-HhcCCCCCC----CCCCCCCCCCCCC------CccHHHHHHHHHHHHHHHHHcCC
Confidence 689999999765357899999997 999865 3 5688998766544 56999999999999999888899
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHc---C--C--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-c
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLIN---G--D--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-G 148 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~--~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~ 148 (216)
+++++||++|||++.... .....++..+.. | . ..++ ..++|+|++|+|++++.+++.+..++.|+++ +
T Consensus 173 ~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~ 251 (321)
T 2pk3_A 173 DIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSG 251 (321)
T ss_dssp EEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCTTCEEEESCS
T ss_pred CEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCCCCeEEeCCC
Confidence 999999999999987642 134455555555 6 3 2222 3567999999999999999876555688776 6
Q ss_pred CCCCHHHHHHHHHHhCCCCC----CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHH
Q 027969 149 SVAQHSDILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 149 ~~~s~~el~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
..+|+.|+++.+.+.++... .|............+|++|+ +.|||+| ++++++|+++++|+++
T Consensus 252 ~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 252 IGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp CEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred CCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence 68999999999999986431 11101122335678999999 7799999 6999999999999875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=194.81 Aligned_cols=197 Identities=19% Similarity=0.168 Sum_probs=144.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++ +|||+||. ++|+... ..+++|+++..+. +.|+.+|..+|.+++.+++..++++
T Consensus 96 ~~~~l~~a~~~~-~~-~~v~~SS~-~v~g~~~----~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~g~~~ 162 (310)
T 1eq2_A 96 YSKELLHYCLER-EI-PFLYASSA-ATYGGRT----SDFIESREYEKPL------NVYGYSKFLFDEYVRQILPEANSQI 162 (310)
T ss_dssp HHHHHHHHHHHH-TC-CEEEEEEG-GGGTTCC----SCBCSSGGGCCCS------SHHHHHHHHHHHHHHHHGGGCSSCE
T ss_pred HHHHHHHHHHHc-CC-eEEEEeeH-HHhCCCC----CCCCCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 689999999998 78 99999997 8998754 5578888765544 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCC---CCccHHHHHHHHcCC-C-CCC---C-CCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCC
Q 027969 82 VAIHPGTVIGPFFQPI---LNFGAEVILNLINGD-Q-SFA---F-PYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 151 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~-~~~---~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 151 (216)
+++||++|||++.... ......++..+..+. . .++ . .++|+|++|+|++++.+++.+. ++.|+++ ++.+
T Consensus 163 ~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~ 241 (310)
T 1eq2_A 163 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAE 241 (310)
T ss_dssp EEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCB
T ss_pred EEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEEeCCCcc
Confidence 9999999999986521 123456677777776 3 333 3 6699999999999999998766 6688776 6789
Q ss_pred CHHHHHHHHHHhCCCCCC---CCCC--ccCCCCccccchHHHHHhCC-ee-eehhhhHHHHHHHHHHc
Q 027969 152 QHSDILKFLREHYPTLLR---SGKL--EEKYQPTIKVSQERAKSLGI-NF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~~---~~~~--~~~~~~~~~~d~~k~~~lg~-~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+.|+++.+.+.++...+ +... .........+|++|++.||| .| ++++++++++++|++++
T Consensus 242 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 242 SFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp CHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 999999999998865311 1111 01122345789999977999 67 99999999999998753
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=193.51 Aligned_cols=199 Identities=14% Similarity=0.097 Sum_probs=155.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+.+..++|||+||. ++||... ..+++|+++..+. +.|+.||..+|++++.++++.++++
T Consensus 105 g~~~l~~a~~~~~~~~~iv~~SS~-~vyg~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 173 (336)
T 2hun_A 105 GTYTLLESIRRENPEVRFVHVSTD-EVYGDIL----KGSFTENDRLMPS------SPYSATKAASDMLVLGWTRTYNLNA 173 (336)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEEG-GGGCCCS----SSCBCTTBCCCCC------SHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhCCCcEEEEeccH-HHHCCCC----CCCcCCCCCCCCC------CccHHHHHHHHHHHHHHHHHhCCCE
Confidence 789999999987223799999997 9998764 5688888766544 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++|||+...+. .....++..+..+. +.++ ...+|+|++|+|++++.+++.+..++.|+++ +..+|+.|
T Consensus 174 ~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e 252 (336)
T 2hun_A 174 SITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLE 252 (336)
T ss_dssp EEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHH
T ss_pred EEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHH
Confidence 9999999999986542 23456667777776 2223 4568999999999999999766555588776 56799999
Q ss_pred HHHHHHHhCCCCC--CCCCC-ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 156 ILKFLREHYPTLL--RSGKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 156 l~~~i~~~~~~~~--~~~~~-~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.+.+.++... +.... .........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 253 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 253 VVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp HHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 9999999986532 11000 011223457899999 7799999 89999999999999865
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=193.09 Aligned_cols=198 Identities=17% Similarity=0.091 Sum_probs=155.0
Q ss_pred cHHHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|.+. ++ ++|||+||. ++|+... ..+++|+++..+. +.|+.+|+.+|.+++.+++..+++
T Consensus 116 ~~~~l~~a~~~~-~~~~~~v~~SS~-~v~g~~~----~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (335)
T 1rpn_A 116 GVTHLLEAIRQF-SPETRFYQASTS-EMFGLIQ----AERQDENTPFYPR------SPYGVAKLYGHWITVNYRESFGLH 183 (335)
T ss_dssp HHHHHHHHHHHH-CTTSEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-CCCCeEEEEeCH-HHhCCCC----CCCCCcccCCCCC------ChhHHHHHHHHHHHHHHHHHcCCc
Confidence 689999999988 75 899999997 9998765 5688998876654 569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCC
Q 027969 81 LVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 151 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 151 (216)
++++||+++||++..... ..+..++..+..|. +. ++ ..++|+|++|+|++++.+++.+. .++|+++ ++.+
T Consensus 184 ~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~ 262 (335)
T 1rpn_A 184 ASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-ADDYVVATGVTT 262 (335)
T ss_dssp EEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-CCCEEECCSCEE
T ss_pred EEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-CCEEEEeCCCCc
Confidence 999999999999865321 11344555666676 32 22 34679999999999999998765 4678766 6779
Q ss_pred CHHHHHHHHHHhCCCCC-----CCCC-CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 152 QHSDILKFLREHYPTLL-----RSGK-LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~-----~~~~-~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+.|+++.+.+.++... +... ..........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 263 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 263 TVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp EHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence 99999999999986531 1111 0122234567899999 7799999 79999999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-30 Score=201.02 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=156.0
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccccc-ccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK-ENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
.||.+|+++|++. + ++|||+||. ++|+... ..+++|+++.....+. .+.+.|+.+|+++|++++.+++. ++
T Consensus 120 ~~~~~ll~a~~~~-~-~~~v~~SS~-~vyg~~~----~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~ 191 (372)
T 3slg_A 120 EANLPIVRSAVKY-G-KHLVFPSTS-EVYGMCA----DEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GL 191 (372)
T ss_dssp TTTHHHHHHHHHH-T-CEEEEECCG-GGGBSCC----CSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT-TC
T ss_pred HHHHHHHHHHHHh-C-CcEEEeCcH-HHhCCCC----CCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC-CC
Confidence 4789999999998 6 899999997 9999875 6788888755322221 24467999999999999999888 99
Q ss_pred cEEEEcCCCccCCCCCCCC-------CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC---CCceE
Q 027969 80 DLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK---ASGRY 144 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~---~~~~~ 144 (216)
+++++||++|||++..+.. ..+..++..+..+. . .++ ..++|+|++|+|++++.+++.+. .+++|
T Consensus 192 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ 271 (372)
T 3slg_A 192 NFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIY 271 (372)
T ss_dssp EEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEE
T ss_pred CEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceE
Confidence 9999999999999975421 13456777777777 2 222 45589999999999999998864 45588
Q ss_pred EEec--CCCCHHHHHHHHHHhCCCCCC----CCCCc-------------cCCCCccccchHHH-HHhCCee-eehhhhHH
Q 027969 145 LLAG--SVAQHSDILKFLREHYPTLLR----SGKLE-------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVR 203 (216)
Q Consensus 145 ~~~~--~~~s~~el~~~i~~~~~~~~~----~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~ 203 (216)
++++ +.+|+.|+++.+.+.++.... +.... ........+|++|+ +.|||+| ++++++|+
T Consensus 272 ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~ 351 (372)
T 3slg_A 272 NIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALR 351 (372)
T ss_dssp EECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHHHHHH
T ss_pred EeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHH
Confidence 7775 489999999999998843210 00000 02344678899999 7799999 79999999
Q ss_pred HHHHHHHHc
Q 027969 204 GCIESLMEK 212 (216)
Q Consensus 204 ~~~~~~~~~ 212 (216)
++++|++++
T Consensus 352 ~~~~~~~~~ 360 (372)
T 3slg_A 352 QIFEAYRGH 360 (372)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHH
Confidence 999998753
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=192.03 Aligned_cols=199 Identities=17% Similarity=0.178 Sum_probs=151.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. ++|+... ..+++|+++..+. +.|+.+|..+|++++.++++.++++
T Consensus 97 ~~~~l~~a~~~~-~~~~~v~~Ss~-~~~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 164 (330)
T 2c20_A 97 GALCLLEVMDEF-KVDKFIFSSTA-ATYGEVD----VDLITEETMTNPT------NTYGETKLAIEKMLHWYSQASNLRY 164 (330)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCG-GGGCSCS----SSSBCTTSCCCCS------SHHHHHHHHHHHHHHHHHHTSSCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEeCCc-eeeCCCC----CCCCCcCCCCCCC------ChHHHHHHHHHHHHHHHHHHhCCcE
Confidence 689999999988 88999999997 9998754 5788999876554 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-CCC---------C---CCCceeehhhhHHHHHHhhcCCC--
Q 027969 82 VAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-QSF---------A---FPYIFVEIRDVVYAHIRALEVPK-- 139 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~~~---------~---~~~~~i~v~D~a~~~~~~~~~~~-- 139 (216)
+++||++|||++.... ...+...+.....+. ..+ + ..++|+|++|+|++++.+++.+.
T Consensus 165 ~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~ 244 (330)
T 2c20_A 165 KIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG 244 (330)
T ss_dssp EEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC
Confidence 9999999999973211 112333333333332 211 1 34579999999999999997642
Q ss_pred -CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-e-ehhhhHHHHHHHHHH
Q 027969 140 -ASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIESLME 211 (216)
Q Consensus 140 -~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~-~~~~~i~~~~~~~~~ 211 (216)
.+++|+++ ++.+|+.|+++.+.+.++.. ++... .........+|++|+ +.|||+| + +++++++++++|+++
T Consensus 245 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~ 323 (330)
T 2c20_A 245 GESDFYNLGNGNGFSVKEIVDAVREVTNHE-IPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQK 323 (330)
T ss_dssp CCCEEEECCCTTCBCHHHHHHHHHHHTTSC-CCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCCcccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHH
Confidence 24588776 67899999999999998643 12111 112334578999999 7899999 5 999999999999987
Q ss_pred cC
Q 027969 212 KG 213 (216)
Q Consensus 212 ~~ 213 (216)
+.
T Consensus 324 ~~ 325 (330)
T 2c20_A 324 QP 325 (330)
T ss_dssp CS
T ss_pred hh
Confidence 64
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=194.98 Aligned_cols=198 Identities=18% Similarity=0.214 Sum_probs=150.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. ++|+.... ..+.+|+++..+. +.|+.+|+.+|++++.+++..++++
T Consensus 97 ~~~~l~~~~~~~-~~~~~v~~SS~-~~~~~~~~---~~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 165 (312)
T 2yy7_A 97 SLFHVLNLAKAK-KIKKIFWPSSI-AVFGPTTP---KENTPQYTIMEPS------TVYGISKQAGERWCEYYHNIYGVDV 165 (312)
T ss_dssp HHHHHHHHHHTT-SCSEEECCEEG-GGCCTTSC---SSSBCSSCBCCCC------SHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEeccH-HHhCCCCC---CCCccccCcCCCC------chhHHHHHHHHHHHHHHHHhcCCcE
Confidence 689999999998 88999999997 99986431 3567777655443 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHH-HHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCC----CceEEEecC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILN-LINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA----SGRYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~-~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~~~~~ 149 (216)
+++||++|||+...+.. +.....+.. +..+. ..+. ..++|+|++|+|++++.+++.+.. +++|+++++
T Consensus 166 ~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~ 245 (312)
T 2yy7_A 166 RSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAM 245 (312)
T ss_dssp ECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCSE
T ss_pred EEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCCC
Confidence 99999999998754322 123333334 33444 3332 567899999999999999987653 258888778
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCC--c--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 150 VAQHSDILKFLREHYPTLLRSGKL--E--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~~~~--~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
.+|+.|+++.+.+.++...++... . ........+|++|+ +.|||+| ++++++|+++++|++
T Consensus 246 ~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 246 SFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp EECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 899999999999998743322110 0 01112357899999 7799999 799999999999974
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=196.09 Aligned_cols=201 Identities=13% Similarity=0.047 Sum_probs=153.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---- 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---- 77 (216)
||.+|+++|.+.+++++|||+||. .+|+.... ..+++|+++..+. +.|+.||..+|++++.++++.
T Consensus 110 ~~~~l~~a~~~~~~~~~~v~~SS~-~vyg~~~~---~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 179 (357)
T 1rkx_A 110 GTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW---IWGYRENEAMGGY------DPYSNSKGCAELVTSSYRNSFFNPA 179 (357)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS---SSCBCTTSCBCCS------SHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHHHHHHhCCCCeEEEecCH-HHhCCCCc---CCCCCCCCCCCCC------CccHHHHHHHHHHHHHHHHHHhhhh
Confidence 689999999987338899999997 99987541 2467887655443 569999999999999987654
Q ss_pred -----CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcC----C-CCCce
Q 027969 78 -----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEV----P-KASGR 143 (216)
Q Consensus 78 -----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~----~-~~~~~ 143 (216)
+++++++||++|||++.......+..++..+.+|. ..++ ..++|+|++|+|++++.+++. + ..+++
T Consensus 180 ~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~ 259 (357)
T 1rkx_A 180 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEG 259 (357)
T ss_dssp GHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSE
T ss_pred ccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCce
Confidence 89999999999999986543334566777777777 3333 556899999999999999874 1 33558
Q ss_pred EEEec---CCCCHHHHHHHHHHhCCCC-C--CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 144 YLLAG---SVAQHSDILKFLREHYPTL-L--RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 144 ~~~~~---~~~s~~el~~~i~~~~~~~-~--~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|++++ +.+|+.|+++.+.+.++.. . ++............+|++|+ +.|||+| ++++++|+++++|+++.
T Consensus 260 ~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 260 WNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp EECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence 88763 5799999999999998642 1 11110122344568999999 7799999 89999999999999764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=190.38 Aligned_cols=184 Identities=14% Similarity=0.085 Sum_probs=147.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ ++|+... ..+++|+++..|. ++|+.+|+.+|++ +.+ +++
T Consensus 88 ~~~~ll~a~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~-~~~-----~~~ 149 (286)
T 3gpi_A 88 GLRNTLSALEGA-PLQHVFFVSST-GVYGQEV----EEWLDEDTPPIAK------DFSGKRMLEAEAL-LAA-----YSS 149 (286)
T ss_dssp HHHHHHHHTTTS-CCCEEEEEEEG-GGCCCCC----SSEECTTSCCCCC------SHHHHHHHHHHHH-GGG-----SSE
T ss_pred HHHHHHHHHhhC-CCCEEEEEccc-EEEcCCC----CCCCCCCCCCCCC------ChhhHHHHHHHHH-Hhc-----CCe
Confidence 689999999987 88999999997 9998865 6789999877665 5699999999999 554 899
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcC---CCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEV---PKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~---~~~~~~~~~~-~~~~s~~ 154 (216)
+++||++|||++.. .++..+.+ . ..-+ ..++|+|++|+|++++.+++. ...+++|+++ ++.+|+.
T Consensus 150 ~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 221 (286)
T 3gpi_A 150 TILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH 221 (286)
T ss_dssp EEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred EEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence 99999999999854 34555555 4 2222 566899999999999999987 4456688877 6789999
Q ss_pred HHHHHHHHhCCCCCCCCCCccCCCCccccchHHHHHhCCee-e-ehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLLRSGKLEEKYQPTIKVSQERAKSLGINF-T-PWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~-~-~~~~~i~~~~~~~~~~ 212 (216)
|+++.+.+.++... +............+|++|++.|||+| . +++++|+++++|+..+
T Consensus 222 e~~~~i~~~~g~~~-~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 222 DLLRWLADRQGIAY-PAGATPPVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMREG 280 (286)
T ss_dssp HHHHHHHHHTTCCC-CCSCCCCBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHcCCCC-CCCCCcccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhcc
Confidence 99999999996432 22111234556789999999999999 6 7999999999998643
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-29 Score=193.33 Aligned_cols=206 Identities=18% Similarity=0.222 Sum_probs=155.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccccc-ccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK-ENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+. + ++|||+||. ++|+... ..+++|+++..+..+. .+.+.|+.+|..+|++++.+++..+++
T Consensus 97 ~~~~l~~~~~~~-~-~~~v~~SS~-~v~g~~~----~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~ 169 (345)
T 2bll_A 97 ENLRIIRYCVKY-R-KRIIFPSTS-EVYGMCS----DKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 169 (345)
T ss_dssp HHHHHHHHHHHT-T-CEEEEECCG-GGGBTCC----CSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-C-CeEEEEecH-HHcCCCC----CCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999998 6 899999997 9998765 5678888765322111 234569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC---CCceEE
Q 027969 81 LVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK---ASGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~ 145 (216)
++++||++|||++.... ...+..++..+..+. . .++ ..++|+|++|+|++++.+++.+. .++.|+
T Consensus 170 ~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~ 249 (345)
T 2bll_A 170 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIIN 249 (345)
T ss_dssp EEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEE
T ss_pred EEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEE
Confidence 99999999999986531 113356667777776 2 233 34579999999999999998753 344788
Q ss_pred Eec-C-CCCHHHHHHHHHHhCCCC----CCCCCCc-------------cCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 146 LAG-S-VAQHSDILKFLREHYPTL----LRSGKLE-------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 146 ~~~-~-~~s~~el~~~i~~~~~~~----~~~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
+++ + .+|+.|+++.+.+.++.. .+|.... ........+|++|+ +.|||+| ++++++|++
T Consensus 250 i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~ 329 (345)
T 2bll_A 250 IGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDE 329 (345)
T ss_dssp ECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred eCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHHHHHH
Confidence 774 4 699999999999987532 2222210 01224567899999 7899999 899999999
Q ss_pred HHHHHHHcCC
Q 027969 205 CIESLMEKGF 214 (216)
Q Consensus 205 ~~~~~~~~~~ 214 (216)
+++|++++.-
T Consensus 330 ~~~~~~~~~~ 339 (345)
T 2bll_A 330 TLDFFLRTVD 339 (345)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHcCC
Confidence 9999987653
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=194.58 Aligned_cols=203 Identities=20% Similarity=0.157 Sum_probs=145.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCcccc--CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVID--ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~--E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|.+.+++++|||+||. ++|+... ..+++ |+++..+. ..+.++|+.+|+.+|++++.+++..++
T Consensus 129 ~~~~ll~a~~~~~~~~~~V~~SS~-~vyg~~~----~~~~~~~E~~~~~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~gi 201 (377)
T 2q1s_A 129 TTLKLYERLKHFKRLKKVVYSAAG-CSIAEKT----FDDAKATEETDIVSL--HNNDSPYSMSKIFGEFYSVYYHKQHQL 201 (377)
T ss_dssp HHHHHHHHHTTCSSCCEEEEEEEC-------------------CCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCH-HHcCCCC----CCCcCcccccccccc--cCCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 689999999876467899999997 9998754 45778 87732111 012356999999999999999887899
Q ss_pred cEEEEcCCCccCCCC---------CCC---CCccHHHHHHHHcCC-CC-CC---CCCceeehhhhHHH-HHHhhcCCCCC
Q 027969 80 DLVAIHPGTVIGPFF---------QPI---LNFGAEVILNLINGD-QS-FA---FPYIFVEIRDVVYA-HIRALEVPKAS 141 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~---------~~~---~~~~~~~~~~~~~~~-~~-~~---~~~~~i~v~D~a~~-~~~~~~~~~~~ 141 (216)
+++++||++|||+.. .+. ......++..+..+. .. ++ ..++|+|++|+|++ ++.+++.+. .
T Consensus 202 ~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~ 280 (377)
T 2q1s_A 202 PTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-G 280 (377)
T ss_dssp CEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-T
T ss_pred CEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-C
Confidence 999999999999986 321 123456777777777 33 33 45689999999999 999998765 3
Q ss_pred ceEEEe-cCCCCHHHHHHHHHHhCCCCC-CCC-CCccCCCC-ccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 142 GRYLLA-GSVAQHSDILKFLREHYPTLL-RSG-KLEEKYQP-TIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 142 ~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~-~~~~~~~~-~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+|+++ ++.+|+.|+++.+.+.++... +.. ........ ...+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 281 g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 281 GVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp EEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred CeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 488776 678999999999999986431 111 11112233 678999999 7899999 89999999999999764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=197.80 Aligned_cols=194 Identities=19% Similarity=0.173 Sum_probs=153.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. +++ |||+||. ++||... . +++|+++..|. ++|+.||..+|++++.+.++ +++
T Consensus 118 gt~~ll~aa~~~-~~~-~V~~SS~-~vyg~~~----~-~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~--~~~ 181 (362)
T 3sxp_A 118 AFLNLLEIARSK-KAK-VIYASSA-GVYGNTK----A-PNVVGKNESPE------NVYGFSKLCMDEFVLSHSND--NVQ 181 (362)
T ss_dssp HHHHHHHHHHHT-TCE-EEEEEEG-GGGCSCC----S-SBCTTSCCCCS------SHHHHHHHHHHHHHHHTTTT--SCE
T ss_pred HHHHHHHHHHHc-CCc-EEEeCcH-HHhCCCC----C-CCCCCCCCCCC------ChhHHHHHHHHHHHHHHhcc--CCE
Confidence 789999999998 776 9999997 9998765 3 89999876655 66999999999999998765 899
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQ 152 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s 152 (216)
+++||++||||+..... .....++..+..+. . .++ ..++|+|++|+|++++.+++.+.. |+|+++ +..+|
T Consensus 182 ~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s 260 (362)
T 3sxp_A 182 VGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS-GVYNVGYSQARS 260 (362)
T ss_dssp EEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEE
T ss_pred EEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCcc
Confidence 99999999999975431 24567777787877 3 334 456899999999999999987764 488776 77899
Q ss_pred HHHHHHHHHHhCCCCCCCCC-Cc-cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 153 HSDILKFLREHYPTLLRSGK-LE-EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 153 ~~el~~~i~~~~~~~~~~~~-~~-~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+.|+++.+.+.++...+... .. ........+|++|+ +.|||+| ++++++|+++++|+++.
T Consensus 261 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 261 YNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp HHHHHHHHHHHHCCCEEECCC-------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999972221111 01 23345678999999 8899999 79999999999998653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=193.34 Aligned_cols=204 Identities=13% Similarity=0.139 Sum_probs=154.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCccccccc-chhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN-KEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|.+. ++++|||+||. .+|+... ..+++|+++.... ..+ .+.|+.+|+.+|++++.+++..+++
T Consensus 86 ~~~~l~~~~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~~~--~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~ 157 (321)
T 1e6u_A 86 IESNIIHAAHQN-DVNKLLFLGSS-CIYPKLA----KQPMAESELLQGT--LEPTNEPYAIAKIAGIKLCESYNRQYGRD 157 (321)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCG-GGSCTTC----CSSBCGGGTTSSC--CCGGGHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHh-CCCeEEEEccH-HHcCCCC----CCCcCccccccCC--CCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 688999999998 88999999997 9998754 5678888643211 112 1469999999999999998878999
Q ss_pred EEEEcCCCccCCCCCCCC---CccHHHHHHHHc----C-C--CCCC---CCCceeehhhhHHHHHHhhcCCCC-------
Q 027969 81 LVAIHPGTVIGPFFQPIL---NFGAEVILNLIN----G-D--QSFA---FPYIFVEIRDVVYAHIRALEVPKA------- 140 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~----~-~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~------- 140 (216)
++++||++|||++..... +.+..++..+.. | . ..++ ..++|+|++|+|++++.+++++..
T Consensus 158 ~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~ 237 (321)
T 1e6u_A 158 YRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQ 237 (321)
T ss_dssp EEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSB
T ss_pred EEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccc
Confidence 999999999999875321 234556665543 3 3 2233 456899999999999999987654
Q ss_pred --CceEEEe-cCCCCHHHHHHHHHHhCCCCC-CCC-CCccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 141 --SGRYLLA-GSVAQHSDILKFLREHYPTLL-RSG-KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 141 --~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~-~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
+++|+++ ++++|+.|+++.+.+.++... +.. ...........+|++|++.|||+| ++++++|+++++|++++.
T Consensus 238 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~ 316 (321)
T 1e6u_A 238 PMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQ 316 (321)
T ss_dssp TTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred cCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHHH
Confidence 3588776 678999999999999986431 110 011223445789999993399999 899999999999998753
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-29 Score=189.05 Aligned_cols=189 Identities=14% Similarity=0.080 Sum_probs=150.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|.+. ++ +|||+||. .+|+... ..+++|+++..|. ++|+.+|..+|++++.+. .++
T Consensus 86 ~~~~l~~~~~~~-~~-~~v~~SS~-~vy~~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~----~~~ 148 (287)
T 3sc6_A 86 GARNVAVASQLV-GA-KLVYISTD-YVFQGDR----PEGYDEFHNPAPI------NIYGASKYAGEQFVKELH----NKY 148 (287)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGSCCCC----SSCBCTTSCCCCC------SHHHHHHHHHHHHHHHHC----SSE
T ss_pred HHHHHHHHHHHc-CC-eEEEEchh-hhcCCCC----CCCCCCCCCCCCC------CHHHHHHHHHHHHHHHhC----CCc
Confidence 689999999998 76 69999997 9998765 6889999877665 569999999999998874 478
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDIL 157 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~ 157 (216)
+++||++|||++.. +....++..+..+. ...+ ..++|+|++|+|+++..+++++. ++.|+++ ++.+|+.|++
T Consensus 149 ~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~ 224 (287)
T 3sc6_A 149 FIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEFA 224 (287)
T ss_dssp EEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHHH
T ss_pred EEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHHH
Confidence 99999999998753 24456666666666 2334 66789999999999999999877 6788776 6789999999
Q ss_pred HHHHHhCCCCC----CCC---CCccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHH
Q 027969 158 KFLREHYPTLL----RSG---KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 158 ~~i~~~~~~~~----~~~---~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
+.+++.++... ++. ...........+|++|++.|||.| ++++++++++++|+++
T Consensus 225 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 225 KKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp HHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred HHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 99999986431 111 011223345689999999999999 9999999999999865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=191.98 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=154.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++ +|||+||. ++|+... ..+++|+.+.... +..+.+.|+.+|+.+|++++.+++..++++
T Consensus 121 ~~~~l~~a~~~~-~~-~~v~~SS~-~v~g~~~----~~~~~E~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 192 (343)
T 2b69_A 121 GTLNMLGLAKRV-GA-RLLLASTS-EVYGDPE----VHPQSEDYWGHVN-PIGPRACYDEGKRVAETMCYAYMKQEGVEV 192 (343)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGGBSCS----SSSBCTTCCCBCC-SSSTTHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHh-CC-cEEEECcH-HHhCCCC----CCCCcccccccCC-CCCCCCchHHHHHHHHHHHHHHHHHhCCcE
Confidence 689999999998 66 89999997 9998764 5678887543211 112346699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCC-CCccHHHHHHHHcCCC--CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPI-LNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++||++|||++.... ...+..++..+..+.+ .++ ..++|+|++|+|++++.+++.+. ++.|+++ ++.+|+.
T Consensus 193 ~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~ 271 (343)
T 2b69_A 193 RVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-SSPVNLGNPEEHTIL 271 (343)
T ss_dssp EEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-CSCEEESCCCEEEHH
T ss_pred EEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-CCeEEecCCCCCcHH
Confidence 9999999999986542 2234566777777762 233 45689999999999999997653 5678766 6789999
Q ss_pred HHHHHHHHhCCCCC----CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+++.+.+.++... +|.. ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 272 e~~~~i~~~~g~~~~~~~~p~~--~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 272 EFAQLIKNLVGSGSEIQFLSEA--QDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp HHHHHHHHHHTCCCCEEEECCC--TTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceeCCCC--CCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999986431 1211 12234567899999 7899999 89999999999998764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=191.01 Aligned_cols=203 Identities=20% Similarity=0.258 Sum_probs=157.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+++++|.+. ++++|||+||. ++|+.... ...+ +|+++..|... ..+.|+.+|+.+|++++.+++. ++++
T Consensus 105 ~~~~l~~a~~~~-~~~~~v~~SS~-~~~~~~~~--~~~~-~E~~~~~p~~~--~~~~Y~~sK~~~e~~~~~~~~~-g~~~ 176 (342)
T 2x4g_A 105 QTNPFYAACLQA-RVPRILYVGSA-YAMPRHPQ--GLPG-HEGLFYDSLPS--GKSSYVLCKWALDEQAREQARN-GLPV 176 (342)
T ss_dssp HHHHHHHHHHHH-TCSCEEEECCG-GGSCCCTT--SSCB-CTTCCCSSCCT--TSCHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHHc-CCCeEEEECCH-HhhCcCCC--CCCC-CCCCCCCcccc--ccChHHHHHHHHHHHHHHHhhc-CCcE
Confidence 689999999998 88999999997 89976541 0134 88877665110 1256999999999999999877 9999
Q ss_pred EEEcCCCccCCCC-CCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHH
Q 027969 82 VAIHPGTVIGPFF-QPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDIL 157 (216)
Q Consensus 82 ~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~ 157 (216)
+++||++|||+.. .+ . ...++..+..|. ..++ ..++|+|++|+|++++.+++++..++.|+++ +. +|+.|++
T Consensus 177 ~ilrp~~v~g~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~ 252 (342)
T 2x4g_A 177 VIGIPGMVLGELDIGP--T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHN-LEMADLT 252 (342)
T ss_dssp EEEEECEEECSCCSSC--S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHH
T ss_pred EEEeCCceECCCCccc--c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHH
Confidence 9999999999986 32 2 445666677776 3235 6778999999999999999876655588776 56 9999999
Q ss_pred HHHHHhCCCCC---CCCCC-------------------------ccCCCCccccchHHH-HHhCC-eeeehhhhHHHHHH
Q 027969 158 KFLREHYPTLL---RSGKL-------------------------EEKYQPTIKVSQERA-KSLGI-NFTPWEVGVRGCIE 207 (216)
Q Consensus 158 ~~i~~~~~~~~---~~~~~-------------------------~~~~~~~~~~d~~k~-~~lg~-~~~~~~~~i~~~~~ 207 (216)
+.+.+.++... +|.+. .........+|++|+ +.||| +|++++++++++++
T Consensus 253 ~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p~~~~~~l~~~~~ 332 (342)
T 2x4g_A 253 RRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAID 332 (342)
T ss_dssp HHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 99999885431 22110 001124567899999 67999 99999999999999
Q ss_pred HHHHcCCCC
Q 027969 208 SLMEKGFLS 216 (216)
Q Consensus 208 ~~~~~~~l~ 216 (216)
|++++|+++
T Consensus 333 ~~~~~g~~~ 341 (342)
T 2x4g_A 333 WFRDNGYFN 341 (342)
T ss_dssp HHHHTTCCC
T ss_pred HHHHcCCCC
Confidence 999999875
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=191.29 Aligned_cols=201 Identities=15% Similarity=0.176 Sum_probs=153.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCC--------CCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP--------MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~--------~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
||.+|+++|.+. ++ +|||+||. ++||.... .....+++|+++..+. +.|+.||..+|.+++.+
T Consensus 105 g~~~l~~a~~~~-~~-~~v~~SS~-~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~ 175 (348)
T 1oc2_A 105 GTYTLLEAARKY-DI-RFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETNYNPS------SPYSSTKAASDLIVKAW 175 (348)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC------SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CC-eEEEeccc-ceeCCCcccccccccccccCCCcCCCCCCCCC------CccHHHHHHHHHHHHHH
Confidence 689999999998 77 99999997 99976421 0012578888765543 56999999999999999
Q ss_pred HHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CC-CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-
Q 027969 74 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QS-FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA- 147 (216)
Q Consensus 74 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~- 147 (216)
++..+++++++||+.|||+..... .....++..+..+. .. ++ ..++|+|++|+|++++.+++.+..++.|+++
T Consensus 176 ~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~ 254 (348)
T 1oc2_A 176 VRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 254 (348)
T ss_dssp HHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECC
T ss_pred HHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCC
Confidence 888899999999999999987542 24456677777776 22 23 4458999999999999999866545588776
Q ss_pred cCCCCHHHHHHHHHHhCCCCCC-CCCCc--cCCCCccccchHHH-HHhCCee-ee-hhhhHHHHHHHHHHc
Q 027969 148 GSVAQHSDILKFLREHYPTLLR-SGKLE--EKYQPTIKVSQERA-KSLGINF-TP-WEVGVRGCIESLMEK 212 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~~-~~~~~--~~~~~~~~~d~~k~-~~lg~~~-~~-~~~~i~~~~~~~~~~ 212 (216)
+..+|+.|+++.+.+.++.... ..... ........+|++|+ +.|||+| ++ ++++++++++|+++.
T Consensus 255 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 255 DGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp SCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 5679999999999999865321 11101 11223456899999 7799999 67 999999999999864
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=193.71 Aligned_cols=197 Identities=19% Similarity=0.163 Sum_probs=153.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++ +|||+||. ++|+... ..+++|+++..+. +.|+.+|..+|++++.+++..++++
T Consensus 143 ~~~~ll~a~~~~-~~-r~V~~SS~-~v~g~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~ 209 (357)
T 2x6t_A 143 YSKELLHYCLER-EI-PFLYASSA-ATYGGRT----SDFIESREYEKPL------NVFGYSKFLFDEYVRQILPEANSQI 209 (357)
T ss_dssp HHHHHHHHHHHH-TC-CEEEEEEG-GGGCSCS----SCCCSSGGGCCCS------SHHHHHHHHHHHHHHHHGGGCSSCE
T ss_pred HHHHHHHHHHHc-CC-eEEEEcch-HHhCCCC----CCCcCCcCCCCCC------ChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 689999999998 77 99999997 8998754 5578888765543 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCC---CCccHHHHHHHHcCC-C-CCC---C-CCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCC
Q 027969 82 VAIHPGTVIGPFFQPI---LNFGAEVILNLINGD-Q-SFA---F-PYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 151 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~-~~~---~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 151 (216)
+++||++|||++.... ...+..++..+..+. . .++ . ..+|+|++|+|++++.+++.+. +++|+++ ++.+
T Consensus 210 ~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~ 288 (357)
T 2x6t_A 210 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAE 288 (357)
T ss_dssp EEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCE
T ss_pred EEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEecCCCcc
Confidence 9999999999986532 123455666677776 2 233 3 5589999999999999998766 6688776 6789
Q ss_pred CHHHHHHHHHHhCCCCCC---CCCC--ccCCCCccccchHHHHHhCC-ee-eehhhhHHHHHHHHHHc
Q 027969 152 QHSDILKFLREHYPTLLR---SGKL--EEKYQPTIKVSQERAKSLGI-NF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~~---~~~~--~~~~~~~~~~d~~k~~~lg~-~~-~~~~~~i~~~~~~~~~~ 212 (216)
|+.|+++.+.+.++...+ +... .........+|++|++.||| .| ++++++|+++++|++++
T Consensus 289 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 289 SFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp EHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence 999999999999865411 1111 01122346789999977999 67 99999999999998753
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=187.75 Aligned_cols=201 Identities=16% Similarity=0.245 Sum_probs=151.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||. .+|+... +..+.+|+++..+. +.|+.||..+|.+++.+.+..++++
T Consensus 91 ~~~~l~~a~~~~-~~~~~v~~SS~-~~~~~~~---~~~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 159 (317)
T 3ajr_A 91 GTYNILEAAKQH-RVEKVVIPSTI-GVFGPET---PKNKVPSITITRPR------TMFGVTKIAAELLGQYYYEKFGLDV 159 (317)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGCCTTS---CSSSBCSSSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEecCH-HHhCCCC---CCCCccccccCCCC------chHHHHHHHHHHHHHHHHHhcCCeE
Confidence 689999999998 88999999997 8998643 13566777655543 5699999999999999988889999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHc-CC-CCCC---CCCceeehhhhHHHHHHhhcCCCC----CceEEEecC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLIN-GD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA----SGRYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~-~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~~~~~ 149 (216)
+++||+.+||+...+.. ......+..... +. ..+. ..++|+|++|+|++++.+++.+.. ++.|++++.
T Consensus 160 ~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp EEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred EEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence 99999999998754321 122333444343 43 2222 567899999999999999987542 358888877
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCC--c--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 150 VAQHSDILKFLREHYPTLLRSGKL--E--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~~~~--~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
.+|+.|+++.+.+.++...++... . ........+|++|+ +.|||+| ++++++++++++|++++.
T Consensus 240 ~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 309 (317)
T 3ajr_A 240 TFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKL 309 (317)
T ss_dssp EECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence 899999999999998743322110 0 01122356899999 7899999 899999999999998764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=186.31 Aligned_cols=184 Identities=16% Similarity=0.183 Sum_probs=144.7
Q ss_pred HHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 3 TLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 3 t~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
+.+++++|++. .++++|||+||+ ++|+... ..+++|+++..+. +.|+.+|+.+|++++.+ .++++
T Consensus 81 ~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~---~~~~~ 146 (286)
T 3ius_A 81 LAALGDQIAARAAQFRWVGYLSTT-AVYGDHD----GAWVDETTPLTPT------AARGRWRVMAEQQWQAV---PNLPL 146 (286)
T ss_dssp HHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCT----TCEECTTSCCCCC------SHHHHHHHHHHHHHHHS---TTCCE
T ss_pred HHHHHHHHHhhcCCceEEEEeecc-eecCCCC----CCCcCCCCCCCCC------CHHHHHHHHHHHHHHhh---cCCCE
Confidence 57899999883 288999999997 9998765 6789999877665 56999999999999887 58999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el 156 (216)
+++||+++||++... +..+..|. ..+. ..++|+|++|+|++++.+++++..+++|+++ ++.+|+.|+
T Consensus 147 ~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~ 218 (286)
T 3ius_A 147 HVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDV 218 (286)
T ss_dssp EEEEECEEEBTTBSS--------STTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHH
T ss_pred EEEeccceECCCchH--------HHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHH
Confidence 999999999998643 22334455 2222 5678999999999999999988766688776 778999999
Q ss_pred HHHHHHhCCCCCC---CCCCc-------cCCCCccccchHHH-HHhCCee-e-ehhhhHHHHHHH
Q 027969 157 LKFLREHYPTLLR---SGKLE-------EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIES 208 (216)
Q Consensus 157 ~~~i~~~~~~~~~---~~~~~-------~~~~~~~~~d~~k~-~~lg~~~-~-~~~~~i~~~~~~ 208 (216)
++.+.+.++.... +.... ........+|++|+ +.|||+| . +++++++++++.
T Consensus 219 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 219 IAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 9999999864321 11110 01125677899999 6699999 6 799999998763
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=187.33 Aligned_cols=200 Identities=16% Similarity=0.105 Sum_probs=149.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 80 (216)
||.+|+++|.+. ++++|||+||. ++|+... ..+++|+++..+. .+.|+.||+.+|.+++.+++. .+++
T Consensus 111 ~~~~l~~~~~~~-~~~~iv~~SS~-~~~g~~~----~~~~~E~~~~~p~-----~~~Y~~sK~~~e~~~~~~~~~~~~~~ 179 (348)
T 1ek6_A 111 GTIQLLEIMKAH-GVKNLVFSSSA-TVYGNPQ----YLPLDEAHPTGGC-----TNPYGKSKFFIEEMIRDLCQADKTWN 179 (348)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC-----SSHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHh-CCCEEEEECcH-HHhCCCC----CCCcCCCCCCCCC-----CCchHHHHHHHHHHHHHHHhcCCCcc
Confidence 689999999988 88999999997 9998754 6788998776541 256999999999999999877 2399
Q ss_pred EEEEcCCCccCCCCC------CC--CCccHHHHHHHHc--CCC--C------CC---CCCceeehhhhHHHHHHhhcCC-
Q 027969 81 LVAIHPGTVIGPFFQ------PI--LNFGAEVILNLIN--GDQ--S------FA---FPYIFVEIRDVVYAHIRALEVP- 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~------~~--~~~~~~~~~~~~~--~~~--~------~~---~~~~~i~v~D~a~~~~~~~~~~- 138 (216)
++++||++|||++.. .. ...+...+..... +.. . .+ ..++|+|++|+|++++.+++.+
T Consensus 180 ~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 259 (348)
T 1ek6_A 180 AVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK 259 (348)
T ss_dssp EEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHT
T ss_pred eEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhccc
Confidence 999999999998531 10 1123333333333 321 1 11 3457999999999999999764
Q ss_pred -CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 139 -KAS-GRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 139 -~~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
..+ ++|+++ ++.+|+.|+++.+.+.++.. ++... .........+|++|+ +.|||+| ++++++++++++|++
T Consensus 260 ~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~ 338 (348)
T 1ek6_A 260 EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK-IPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQK 338 (348)
T ss_dssp TTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred ccCCceEEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCccchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 334 478776 67899999999999998642 22111 112234567999999 7899999 899999999999998
Q ss_pred HcC
Q 027969 211 EKG 213 (216)
Q Consensus 211 ~~~ 213 (216)
++.
T Consensus 339 ~~~ 341 (348)
T 1ek6_A 339 QNP 341 (348)
T ss_dssp HCT
T ss_pred hcc
Confidence 763
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=190.46 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=151.6
Q ss_pred cHHHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcc--------cccccchhHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV--------LCKENKEWYSLAKTLAEEAAWK 72 (216)
Q Consensus 2 gt~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~--------~~~~~~~~Y~~sK~~~E~~~~~ 72 (216)
||.+|+++|.+. ++ ++|||+||. ++|+... .+++|+.+.... .+..+.+.|+.||+.+|.+++.
T Consensus 133 gt~~ll~a~~~~-~~~~~~V~~SS~-~vyg~~~-----~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~ 205 (404)
T 1i24_A 133 GTLNVLFAIKEF-GEECHLVKLGTM-GEYGTPN-----IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAF 205 (404)
T ss_dssp HHHHHHHHHHHH-CTTCEEEEECCG-GGGCCCS-----SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCcEEEEeCcH-HHhCCCC-----CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHH
Confidence 789999999988 66 599999997 9998653 456665321100 1122346699999999999999
Q ss_pred HHHHcCCcEEEEcCCCccCCCCCCC----------------CCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHH
Q 027969 73 FAKENGIDLVAIHPGTVIGPFFQPI----------------LNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAH 131 (216)
Q Consensus 73 ~~~~~~~~~~ilR~~~v~G~~~~~~----------------~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~ 131 (216)
+++..+++++++||++|||++..+. ...+..++..+..|. . .++ ..++|+|++|+|+++
T Consensus 206 ~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~ 285 (404)
T 1i24_A 206 TCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 285 (404)
T ss_dssp HHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred HHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHH
Confidence 9887899999999999999986421 124567777777777 2 334 346899999999999
Q ss_pred HHhhcCCCC-C--ceEEEecCCCCHHHHHHHHHHh---CCCCC----CCCCCccCCCCccccchHHHHHhCCee-eehhh
Q 027969 132 IRALEVPKA-S--GRYLLAGSVAQHSDILKFLREH---YPTLL----RSGKLEEKYQPTIKVSQERAKSLGINF-TPWEV 200 (216)
Q Consensus 132 ~~~~~~~~~-~--~~~~~~~~~~s~~el~~~i~~~---~~~~~----~~~~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~ 200 (216)
+.+++.+.. + ++|+++++++|+.|+++.+.+. ++... +|............+|++|+++|||+| .++++
T Consensus 286 ~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~ 365 (404)
T 1i24_A 286 EIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDS 365 (404)
T ss_dssp HHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHH
T ss_pred HHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhhCCCccccccCcccCccccceEecCHHHHHHcCCCcCcCHHH
Confidence 999987654 3 3788877789999999999997 44321 121111112234568999997799999 89999
Q ss_pred hHHHHHHHHHHc
Q 027969 201 GVRGCIESLMEK 212 (216)
Q Consensus 201 ~i~~~~~~~~~~ 212 (216)
+++++++|++..
T Consensus 366 ~l~~~~~~~~~~ 377 (404)
T 1i24_A 366 LLDSLLNFAVQF 377 (404)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 999999998653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=185.98 Aligned_cols=193 Identities=14% Similarity=0.133 Sum_probs=150.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ +|||+||. ++|+... ..+++|+++..|. +.|+.+|..+|++++.+. .++
T Consensus 84 ~~~~l~~a~~~~-~~-~~v~~SS~-~vy~~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~----~~~ 146 (299)
T 1n2s_A 84 SVEAIAKAANET-GA-WVVHYSTD-YVFPGTG----DIPWQETDATSPL------NVYGKTKLAGEKALQDNC----PKH 146 (299)
T ss_dssp HHHHHHHHHTTT-TC-EEEEEEEG-GGSCCCT----TCCBCTTSCCCCS------SHHHHHHHHHHHHHHHHC----SSE
T ss_pred HHHHHHHHHHHc-CC-cEEEEecc-cEEeCCC----CCCCCCCCCCCCc------cHHHHHHHHHHHHHHHhC----CCe
Confidence 689999999998 76 79999997 9998765 5688998876654 569999999999998874 489
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC-CCCceeehhhhHHHHHHhhcCC--C--CCceEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA-FPYIFVEIRDVVYAHIRALEVP--K--ASGRYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~i~v~D~a~~~~~~~~~~--~--~~~~~~~~-~~~~s~ 153 (216)
+++||+++||++.. +....++..+..+. . ..+ ...+|+|++|+|+++..+++.+ . .++.|+++ ++.+|+
T Consensus 147 ~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 223 (299)
T 1n2s_A 147 LIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTW 223 (299)
T ss_dssp EEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEH
T ss_pred EEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCH
Confidence 99999999999864 24455666666676 2 334 5678999999999999999865 2 25688776 678999
Q ss_pred HHHHHHHHHhCCCCC----------CCCCC---ccCCCCccccchHHH-HHhCCeeeehhhhHHHHHHHHHHcCC
Q 027969 154 SDILKFLREHYPTLL----------RSGKL---EEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLMEKGF 214 (216)
Q Consensus 154 ~el~~~i~~~~~~~~----------~~~~~---~~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~~~~~ 214 (216)
.|+++.+.+.++... ++... .........+|++|+ +.|||+|.+++++++++++|++++..
T Consensus 224 ~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~~~~ 298 (299)
T 1n2s_A 224 HDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT 298 (299)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999998874321 11100 011234578999999 77999998899999999999987754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=186.93 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=153.2
Q ss_pred cHHHHHHHHhccCCc---cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~---~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+|+++|.+. ++ ++|||+||. ++|+... ..+++|+++..+. +.|+.||+.+|.+++.+++..+
T Consensus 132 g~~~l~~a~~~~-~~~~~~~iv~~SS~-~~~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~ 199 (375)
T 1t2a_A 132 GTLRLLDAVKTC-GLINSVKFYQASTS-ELYGKVQ----EIPQKETTPFYPR------SPYGAAKLYAYWIVVNFREAYN 199 (375)
T ss_dssp HHHHHHHHHHHT-TCTTTCEEEEEEEG-GGTCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCccceEEEecch-hhhCCCC----CCCCCccCCCCCC------ChhHHHHHHHHHHHHHHHHHhC
Confidence 689999999987 66 799999997 9998764 5688998766554 5699999999999999988889
Q ss_pred CcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 79 IDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
++++++|++++||++..... ..+..++..+..|. .. ++ ..++|+|++|+|++++.+++.+. .+.|+++ ++
T Consensus 200 ~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~ 278 (375)
T 1t2a_A 200 LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-PEDFVIATGE 278 (375)
T ss_dssp CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-CCCEEECCSC
T ss_pred CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-CceEEEeCCC
Confidence 99999999999999864321 01234455566665 32 22 34689999999999999998765 4677665 77
Q ss_pred CCCHHHHHHHHHHhCCCCC------CCCC------------C-----ccCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 150 VAQHSDILKFLREHYPTLL------RSGK------------L-----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~------~~~~------------~-----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
.+|+.|+++.+.+.++... +|.+ . .........+|++|+ +.|||+| ++++++|++
T Consensus 279 ~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~ 358 (375)
T 1t2a_A 279 VHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE 358 (375)
T ss_dssp CEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred cccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHH
Confidence 8999999999999986531 1111 0 011223456899999 7899999 799999999
Q ss_pred HHHHHHHc
Q 027969 205 CIESLMEK 212 (216)
Q Consensus 205 ~~~~~~~~ 212 (216)
+++|+++.
T Consensus 359 ~~~~~~~~ 366 (375)
T 1t2a_A 359 MVHADVEL 366 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999765
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=189.33 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=152.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCC-CCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMT-PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|.+. ++++|||+||. ++|+...... ...+++|+++... .+.+.|+.+|..+|++++.+++..+++
T Consensus 124 g~~~ll~a~~~~-~~~~~V~~SS~-~v~~~~~~~~~~~~~~~E~~~~~~----~~~~~Y~~sK~~~E~~~~~~~~~~gi~ 197 (379)
T 2c5a_A 124 ISFNMIEAARIN-GIKRFFYASSA-CIYPEFKQLETTNVSLKESDAWPA----EPQDAFGLEKLATEELCKHYNKDFGIE 197 (379)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGSCGGGSSSSSSCEECGGGGSSB----CCSSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHc-CCCEEEEEeeh-heeCCCCCCCccCCCcCcccCCCC----CCCChhHHHHHHHHHHHHHHHHHHCCC
Confidence 689999999988 88999999997 8997542100 1245777653211 133569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCCC---ccHHHHHHHHcCCC---CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCC
Q 027969 81 LVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQ---SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSV 150 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~---~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~ 150 (216)
++++||++|||+....... ....++..+..+.+ .++ ..++|+|++|+|++++.+++.+ .++.|+++ ++.
T Consensus 198 ~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~ 276 (379)
T 2c5a_A 198 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEM 276 (379)
T ss_dssp EEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCC
T ss_pred EEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-CCCeEEeCCCCc
Confidence 9999999999998654221 34566667766653 122 3568999999999999999876 45677665 678
Q ss_pred CCHHHHHHHHHHhCCCCC----CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 151 AQHSDILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+|+.|+++.+.+.++... +|.. .......+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 277 ~s~~e~~~~i~~~~g~~~~~~~~p~~---~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 277 VSMNEMAEMVLSFEEKKLPIHHIPGP---EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp EEHHHHHHHHHHTTTCCCCEEEECCC---CCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhCCCCceeeCCCC---CCcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999986431 2211 1233467899999 7799999 79999999999999764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-27 Score=185.94 Aligned_cols=198 Identities=16% Similarity=0.090 Sum_probs=152.5
Q ss_pred cHHHHHHHHhccCCc---cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~---~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+++++|.+. ++ ++|||+||. ++|+... ..+++|+++..+. +.|+.||..+|.+++.++++.+
T Consensus 108 ~~~~l~~~~~~~-~~~~~~~iv~~SS~-~v~g~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~ 175 (372)
T 1db3_A 108 GTLRLLEAIRFL-GLEKKTRFYQASTS-ELYGLVQ----EIPQKETTPFYPR------SPYAVAKLYAYWITVNYRESYG 175 (372)
T ss_dssp HHHHHHHHHHHT-TCTTTCEEEEEEEG-GGGTTCC----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCCCcEEEEeCCh-hhhCCCC----CCCCCccCCCCCC------ChHHHHHHHHHHHHHHHHHHhC
Confidence 789999999988 76 799999997 9998764 5688898776554 5699999999999999988889
Q ss_pred CcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 79 IDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
++++++|++.+||++..... ..+..++..+..|. +. ++ ..++|+|++|+|++++.+++++. ++.|+++ ++
T Consensus 176 ~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~ 254 (372)
T 1db3_A 176 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-PEDFVIATGV 254 (372)
T ss_dssp CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-CCCEEECCCC
T ss_pred CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-CceEEEcCCC
Confidence 99999999999999865321 01234455566675 32 22 44689999999999999998764 4678765 67
Q ss_pred CCCHHHHHHHHHHhCCCCC------CCCC---------------------------CccCCCCccccchHHH-HHhCCee
Q 027969 150 VAQHSDILKFLREHYPTLL------RSGK---------------------------LEEKYQPTIKVSQERA-KSLGINF 195 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~------~~~~---------------------------~~~~~~~~~~~d~~k~-~~lg~~~ 195 (216)
.+|+.|+++.+.+.++... +|.+ ..........+|++|+ +.|||+|
T Consensus 255 ~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 334 (372)
T 1db3_A 255 QYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKP 334 (372)
T ss_dssp CEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCC
T ss_pred ceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCcc
Confidence 8999999999999986321 1110 0011223456799999 7799999
Q ss_pred -eehhhhHHHHHHHHHHc
Q 027969 196 -TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 196 -~~~~~~i~~~~~~~~~~ 212 (216)
++++++|+++++|++++
T Consensus 335 ~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 335 EITLREMVSEMVANDLEA 352 (372)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHh
Confidence 99999999999999764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=183.00 Aligned_cols=199 Identities=15% Similarity=0.155 Sum_probs=147.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~ 80 (216)
||.+++++|++. ++++|||+||. ++|+... ..+++|+.+..+. .+.|+.||..+|++++.+++.. +++
T Consensus 103 ~~~~l~~~~~~~-~~~~iv~~SS~-~~~g~~~----~~~~~e~~~~~~~-----~~~Y~~sK~~~e~~~~~~~~~~~~~~ 171 (338)
T 1udb_A 103 GTLRLISAMRAA-NVKNFIFSSSA-TVYGDNP----KIPYVESFPTGTP-----QSPYGKSKLMVEQILTDLQKAQPDWS 171 (338)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCSCC----SSSBCTTSCCCCC-----SSHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHHHHHhc-CCCeEEEEccH-HHhCCCC----CCCcCcccCCCCC-----CChHHHHHHHHHHHHHHHHHhcCCCc
Confidence 688999999988 78899999997 9998754 5678888765431 2459999999999999998776 899
Q ss_pred EEEEcCCCccCCCCC------CC--CCccHHHHHHHHcCC-CC---------CC---CCCceeehhhhHHHHHHhhcCC-
Q 027969 81 LVAIHPGTVIGPFFQ------PI--LNFGAEVILNLINGD-QS---------FA---FPYIFVEIRDVVYAHIRALEVP- 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~------~~--~~~~~~~~~~~~~~~-~~---------~~---~~~~~i~v~D~a~~~~~~~~~~- 138 (216)
++++||+++||+... +. ...+...+.....+. .. .+ ..++|+|++|+|++++.+++..
T Consensus 172 ~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~ 251 (338)
T 1udb_A 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLA 251 (338)
T ss_dssp EEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHT
T ss_pred eEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhh
Confidence 999999999998421 11 112333343433332 11 11 3458999999999999998753
Q ss_pred -CCC-ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 139 -KAS-GRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 139 -~~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
..+ ++|+++ +..+|+.|+++.+.+.++.. ++... .........+|++|+ +.|||+| ++++++++++++|++
T Consensus 252 ~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~ 330 (338)
T 1udb_A 252 NKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQS 330 (338)
T ss_dssp TCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred ccCCCcEEEecCCCceeHHHHHHHHHHHhCCC-CcceeCCCCCCchhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence 233 478776 67899999999999987532 22111 112234567899999 7899999 899999999999998
Q ss_pred Hc
Q 027969 211 EK 212 (216)
Q Consensus 211 ~~ 212 (216)
++
T Consensus 331 ~~ 332 (338)
T 1udb_A 331 RH 332 (338)
T ss_dssp HC
T ss_pred hc
Confidence 75
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=187.86 Aligned_cols=202 Identities=18% Similarity=0.157 Sum_probs=148.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCC---CCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP---MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~---~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+|+++|.+. ++++|||+||. ++|+.... .....+++|+++..+. +.|+.||+.+|.+++.++++.+
T Consensus 123 g~~~ll~a~~~~-~~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~g 194 (397)
T 1gy8_A 123 GILRLLQAMLLH-KCDKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYG 194 (397)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCEEEEECCH-HHhCCCCcccccccccCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHC
Confidence 789999999988 88999999997 99976430 0013578888765443 5699999999999999988889
Q ss_pred CcEEEEcCCCccCCCCCCC-------CCccHHHHH-----HHHcCCC-----------CC---------C---CCCceee
Q 027969 79 IDLVAIHPGTVIGPFFQPI-------LNFGAEVIL-----NLINGDQ-----------SF---------A---FPYIFVE 123 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~-----~~~~~~~-----------~~---------~---~~~~~i~ 123 (216)
++++++||++|||++.... ...+...+. .+..+.. .+ + ..++|+|
T Consensus 195 i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~ 274 (397)
T 1gy8_A 195 IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVH 274 (397)
T ss_dssp CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEE
T ss_pred CcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEe
Confidence 9999999999999974211 112222222 4334321 11 1 3457999
Q ss_pred hhhhHHHHHHhhcCCC-C-----C---ceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-H
Q 027969 124 IRDVVYAHIRALEVPK-A-----S---GRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-K 189 (216)
Q Consensus 124 v~D~a~~~~~~~~~~~-~-----~---~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~ 189 (216)
++|+|++++.+++.+. . . ++|+++ ++.+|+.|+++.+.+.++.. ++... .........+|++|+ +
T Consensus 275 v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~ 353 (397)
T 1gy8_A 275 VCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHP-IPVRECGRREGDPAYLVAASDKARE 353 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCC-CCEEEECCCTTCCSEECBCCHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCC-CCeeeCCCCCCcccccccCHHHHHH
Confidence 9999999999997532 1 2 678776 67899999999999988642 22111 122334578999999 7
Q ss_pred HhCCee-e-ehhhhHHHHHHHHHHc
Q 027969 190 SLGINF-T-PWEVGVRGCIESLMEK 212 (216)
Q Consensus 190 ~lg~~~-~-~~~~~i~~~~~~~~~~ 212 (216)
.|||+| + +++++|+++++|++++
T Consensus 354 ~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 354 VLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 899999 5 9999999999999876
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=185.45 Aligned_cols=203 Identities=17% Similarity=0.208 Sum_probs=151.4
Q ss_pred cHHHHHHHHhcc-CCcc-------EEEEcccccccccCCCCC------CCCccccCCCCCCcccccccchhHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-HSIK-------RVVLTSSIGAMLLNETPM------TPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 67 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~-------~~i~~Ss~~~vy~~~~~~------~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E 67 (216)
||.+++++|.+. .+++ +|||+||. ++||..... ....+++|+++..+. +.|+.||..+|
T Consensus 103 g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~------~~Y~~sK~~~e 175 (361)
T 1kew_A 103 GTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLPHPDEVENSVTLPLFTETTAYAPS------SPYSASKASSD 175 (361)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCCCGGGSCTTSCCCCBCTTSCCCCC------SHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcccccccCceEEEeCCH-HHhCCCcccccccccccCCCCCCCCCCCCC------CccHHHHHHHH
Confidence 789999999875 2455 99999997 899864300 000167887765543 56999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 68 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 68 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
.+++.++++.+++++++||++|||+...+. .....++..+..+. +.++ ..++|+|++|+|++++.+++.+..++
T Consensus 176 ~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~ 254 (361)
T 1kew_A 176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGE 254 (361)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCCCCC
Confidence 999999888899999999999999986542 23456667777776 2223 44679999999999999998765555
Q ss_pred eEEEe-cCCCCHHHHHHHHHHhCCCCC--C-CCC-----Cc--cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHH
Q 027969 143 RYLLA-GSVAQHSDILKFLREHYPTLL--R-SGK-----LE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 209 (216)
Q Consensus 143 ~~~~~-~~~~s~~el~~~i~~~~~~~~--~-~~~-----~~--~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~ 209 (216)
+|+++ +..+|+.|+++.+.+.++... . |.. .. ........+|++|+ +.|||+| ++++++|+++++|+
T Consensus 255 ~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~ 334 (361)
T 1kew_A 255 TYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWY 334 (361)
T ss_dssp EEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHH
T ss_pred EEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHH
Confidence 88777 567999999999998874211 0 100 00 11223457899999 7799999 89999999999999
Q ss_pred HHc
Q 027969 210 MEK 212 (216)
Q Consensus 210 ~~~ 212 (216)
+++
T Consensus 335 ~~~ 337 (361)
T 1kew_A 335 LAN 337 (361)
T ss_dssp HHC
T ss_pred Hhc
Confidence 765
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=184.43 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=147.3
Q ss_pred cHHHHHHHHhccCCcc-EEEEcccccccccCCCCCC------------CCccccCCCCCCcccccccchhHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMT------------PDVVIDETWFSNPVLCKENKEWYSLAKTLAEE 68 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-~~i~~Ss~~~vy~~~~~~~------------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~ 68 (216)
||.+|+++|.+. +++ +|||+||. ++|+...... ...+++|+.+..+ .+.|+.||+.+|+
T Consensus 103 ~~~~l~~a~~~~-~~~~~iv~~SS~-~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~------~~~Y~~sK~~~E~ 174 (347)
T 1orr_A 103 GTLNLLEAVRQY-NSNCNIIYSSTN-KVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF------HSPYGCSKGAADQ 174 (347)
T ss_dssp HHHHHHHHHHHH-CTTCEEEEEEEG-GGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCceEEEeccH-HHhCCCCcCCcccccccccccccccCccccCCCCC------CCchHHHHHHHHH
Confidence 789999999998 665 99999997 8998653100 0012445544333 3669999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-----C--CCC---CCCceeehhhhHHHHHHhhc
Q 027969 69 AAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-----Q--SFA---FPYIFVEIRDVVYAHIRALE 136 (216)
Q Consensus 69 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-----~--~~~---~~~~~i~v~D~a~~~~~~~~ 136 (216)
+++.++++.+++++++||++|||+...... ..+..++..+..+. + .++ ..++|+|++|+|++++.+++
T Consensus 175 ~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 254 (347)
T 1orr_A 175 YMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254 (347)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHh
Confidence 999998888999999999999999864321 12345555554443 1 122 34579999999999999997
Q ss_pred C-CCCCc-eEEEecC---CCCHHHHHHHHHHhCCCCC----CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHH
Q 027969 137 V-PKASG-RYLLAGS---VAQHSDILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 205 (216)
Q Consensus 137 ~-~~~~~-~~~~~~~---~~s~~el~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~ 205 (216)
. ....| .|+++++ ++|+.|+++.+.+.++... +|. .........+|++|+ +.|||+| ++++++|+++
T Consensus 255 ~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~ 332 (347)
T 1orr_A 255 NVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV--RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKM 332 (347)
T ss_dssp THHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC--CSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred ccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC--CCCCcceeecCHHHHHHHHCCCccCCHHHHHHHH
Confidence 5 22334 7888744 4899999999999986431 111 122334567899999 7899999 8999999999
Q ss_pred HHHHHHc
Q 027969 206 IESLMEK 212 (216)
Q Consensus 206 ~~~~~~~ 212 (216)
++|+++.
T Consensus 333 ~~~~~~~ 339 (347)
T 1orr_A 333 YDWTSSI 339 (347)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9999875
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=178.88 Aligned_cols=187 Identities=14% Similarity=0.041 Sum_probs=146.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++ +|||+||. ++|+... ..+++|+++..+. +.|+.+|..+|.+++.+ +.++
T Consensus 93 ~~~~l~~a~~~~-~~-~iv~~SS~-~v~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~E~~~~~~----~~~~ 155 (292)
T 1vl0_A 93 GPKNLAAAAYSV-GA-EIVQISTD-YVFDGEA----KEPITEFDEVNPQ------SAYGKTKLEGENFVKAL----NPKY 155 (292)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGSCSCC----SSCBCTTSCCCCC------SHHHHHHHHHHHHHHHH----CSSE
T ss_pred HHHHHHHHHHHc-CC-eEEEechH-HeECCCC----CCCCCCCCCCCCc------cHHHHHHHHHHHHHHhh----CCCe
Confidence 689999999998 77 99999997 9998764 5688998876654 56999999999999877 3579
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDIL 157 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~ 157 (216)
+++||+.|||+ .. +....++..+..+. . ..+ ...+|+|++|+|++++.+++.+ .++.|+++ ++.+|+.|++
T Consensus 156 ~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~ 230 (292)
T 1vl0_A 156 YIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFA 230 (292)
T ss_dssp EEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHH
T ss_pred EEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHH
Confidence 99999999999 22 23445556666665 2 233 5578999999999999999876 56688766 6789999999
Q ss_pred HHHHHhCCCCC----CCCCCc---cCCCCccccchHHH-HHhCCeeeehhhhHHHHHHHHH
Q 027969 158 KFLREHYPTLL----RSGKLE---EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 210 (216)
Q Consensus 158 ~~i~~~~~~~~----~~~~~~---~~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~ 210 (216)
+.+.+.++... ++.... ........+|++|+ +.|||+|.+++++++++++|++
T Consensus 231 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 231 VEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 291 (292)
T ss_dssp HHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhc
Confidence 99999986431 222111 12234567999999 6799999999999999999985
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-27 Score=196.65 Aligned_cols=207 Identities=19% Similarity=0.224 Sum_probs=157.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccc-cccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC-KENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+. + ++|||+||. ++|+... ..+++|+++.....+ ..+.+.|+.||+.+|++++.+++..+++
T Consensus 412 gt~~ll~aa~~~-~-~r~V~~SS~-~vyg~~~----~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~ 484 (660)
T 1z7e_A 412 ENLRIIRYCVKY-R-KRIIFPSTS-EVYGMCS----DKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 484 (660)
T ss_dssp HHHHHHHHHHHT-T-CEEEEECCG-GGGBTCC----SSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-C-CEEEEEecH-HHcCCCC----CcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 789999999998 6 899999997 8998765 567888876422111 1234569999999999999998878999
Q ss_pred EEEEcCCCccCCCCCC-------CCCccHHHHHHHHcCCC--CCC---CCCceeehhhhHHHHHHhhcCCC---CCceEE
Q 027969 81 LVAIHPGTVIGPFFQP-------ILNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEVPK---ASGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~--~~~---~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~ 145 (216)
++++||++|||+.... .......++..+..|.+ .++ ..++|+|++|+|++++.+++.+. .++.|+
T Consensus 485 ~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~n 564 (660)
T 1z7e_A 485 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIIN 564 (660)
T ss_dssp EEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEE
T ss_pred EEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEE
Confidence 9999999999998643 11234566777777762 222 44689999999999999998754 344787
Q ss_pred Ee-cC-CCCHHHHHHHHHHhCCCC----CCCCCCc-------------cCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 146 LA-GS-VAQHSDILKFLREHYPTL----LRSGKLE-------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 146 ~~-~~-~~s~~el~~~i~~~~~~~----~~~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
++ ++ .+|+.|+++.+.+.++.. .+|.... ........+|++|+ +.|||+| ++++++|++
T Consensus 565 i~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~ 644 (660)
T 1z7e_A 565 IGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDE 644 (660)
T ss_dssp ECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred ECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHHHHHH
Confidence 77 44 799999999999887432 2232210 01234567899999 7799999 899999999
Q ss_pred HHHHHHHcCCC
Q 027969 205 CIESLMEKGFL 215 (216)
Q Consensus 205 ~~~~~~~~~~l 215 (216)
+++|++++..+
T Consensus 645 ~i~~~~~~~~~ 655 (660)
T 1z7e_A 645 TLDFFLRTVDL 655 (660)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHHHhhccc
Confidence 99999887643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=183.09 Aligned_cols=197 Identities=15% Similarity=0.040 Sum_probs=151.7
Q ss_pred cHHHHHHHHhccCCcc-----EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIK-----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-----~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
||.+|+++|.+. +++ +|||+||. ++|+... . +++|+++..+. +.|+.+|+.+|.+++.+++.
T Consensus 136 ~~~~l~~a~~~~-~~~~~~~~~~v~~SS~-~vyg~~~----~-~~~E~~~~~~~------~~Y~~sK~~~E~~~~~~~~~ 202 (381)
T 1n7h_A 136 GALRLLEAVRSH-TIDSGRTVKYYQAGSS-EMFGSTP----P-PQSETTPFHPR------SPYAASKCAAHWYTVNYREA 202 (381)
T ss_dssp HHHHHHHHHHHH-HHHHCCCCEEEEEEEG-GGGTTSC----S-SBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCccCCccEEEEeCcH-HHhCCCC----C-CCCCCCCCCCC------CchHHHHHHHHHHHHHHHHH
Confidence 689999999987 666 99999997 9998764 4 88898766554 56999999999999999888
Q ss_pred cCCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-
Q 027969 77 NGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA- 147 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~- 147 (216)
.+++++++|++++|||+..... ..+..++..+..|. .. ++ ..++|+|++|+|++++.+++.+. ++.|+++
T Consensus 203 ~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~ 281 (381)
T 1n7h_A 203 YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK-PDDYVVAT 281 (381)
T ss_dssp HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS-CCEEEECC
T ss_pred hCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCeEEeeC
Confidence 8999999999999999865321 01233445555665 32 22 34579999999999999998765 4678666
Q ss_pred cCCCCHHHHHHHHHHhCCCCC-----CCCC-CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 148 GSVAQHSDILKFLREHYPTLL-----RSGK-LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~-----~~~~-~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
++.+|+.|+++.+.+.++... +... ..........+|++|+ +.|||+| ++++++|+++++|+.+.
T Consensus 282 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 282 EEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp SCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 678999999999999987531 1110 0112233457899999 7799999 89999999999998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=180.55 Aligned_cols=193 Identities=17% Similarity=0.183 Sum_probs=148.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCc--cccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDV--VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~--~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|.+. ++++|||+||. ++|+... .. +++|++ .+ .+.|+.+|..+|.+++.+ ++
T Consensus 115 ~~~~l~~a~~~~-~~~~iV~~SS~-~~~~~~~----~~~~~~~E~~--~~------~~~Y~~sK~~~e~~~~~~----~~ 176 (330)
T 2pzm_A 115 GSINVAKAASKA-GVKRLLNFQTA-LCYGRPA----TVPIPIDSPT--AP------FTSYGISKTAGEAFLMMS----DV 176 (330)
T ss_dssp HHHHHHHHHHHH-TCSEEEEEEEG-GGGCSCS----SSSBCTTCCC--CC------CSHHHHHHHHHHHHHHTC----SS
T ss_pred HHHHHHHHHHHc-CCCEEEEecCH-HHhCCCc----cCCCCcCCCC--CC------CChHHHHHHHHHHHHHHc----CC
Confidence 689999999988 78999999997 8897653 22 788876 22 255999999999999776 79
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-C-CCceeehhhhHH-HHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-F-PYIFVEIRDVVY-AHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~v~D~a~-~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++++||+++|||+.. .+....++..+..+...++ + ..+|+|++|+|+ +++.+++.+. ++.|+++ +..+|+.|
T Consensus 177 ~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e 253 (330)
T 2pzm_A 177 PVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKE 253 (330)
T ss_dssp CEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHH
T ss_pred CEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHH
Confidence 9999999999999862 2244556666666652233 4 467999999999 9999998765 6688776 57899999
Q ss_pred HHHHHHHhCCCCCCCCCCccCCCCccccchHHH-----HHhCCee-eehhhhHHHHHHHHHHcCCC
Q 027969 156 ILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-----KSLGINF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 156 l~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lg~~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
+++.+.+.++...+.............+|++|+ +.|||+| ++++++|+++++|+++.+++
T Consensus 254 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 254 VFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp HHHHHHHHHTCCCSSCCCEECCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHhCCCCceeCCCCcchhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 999999998654211100011234556777776 7799999 99999999999999999886
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-26 Score=177.60 Aligned_cols=198 Identities=14% Similarity=0.076 Sum_probs=151.8
Q ss_pred cHHHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+. ++ ++|||+||. ++||... ..+++|+.+..+. +.|+.||..+|.+++.++++.+++
T Consensus 105 g~~~l~~a~~~~-~~~~~iv~~SS~-~vyg~~~----~~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~ 172 (345)
T 2z1m_A 105 GVLRILEALRTV-KPDTKFYQASTS-EMFGKVQ----EIPQTEKTPFYPR------SPYAVAKLFGHWITVNYREAYNMF 172 (345)
T ss_dssp HHHHHHHHHHHH-CTTCEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-CCCceEEEEech-hhcCCCC----CCCCCccCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCc
Confidence 689999999987 76 799999997 9998765 5678888766554 569999999999999998888999
Q ss_pred EEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCC
Q 027969 81 LVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 151 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 151 (216)
++++|+.++|||+...... .+..++..+..+. .. ++ ..++|+|++|+|++++.+++.+. .+.|+++ ++.+
T Consensus 173 ~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~ 251 (345)
T 2z1m_A 173 ACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-PDDYVIATGETH 251 (345)
T ss_dssp EEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-CCCEEECCSCCE
T ss_pred eEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-CceEEEeCCCCc
Confidence 9999999999998643210 1123344555665 22 22 34579999999999999998765 4678665 7789
Q ss_pred CHHHHHHHHHHhCCCCC------CCCC------------C-----ccCCCCccccchHHH-HHhCCee-eehhhhHHHHH
Q 027969 152 QHSDILKFLREHYPTLL------RSGK------------L-----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~------~~~~------------~-----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~ 206 (216)
|+.|+++.+.+.++... +|.+ . .........+|++|+ +.|||+| +++++++++++
T Consensus 252 s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~ 331 (345)
T 2z1m_A 252 TVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMM 331 (345)
T ss_dssp EHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHH
Confidence 99999999999986531 1110 0 011223456799999 7899999 89999999999
Q ss_pred HHHHHc
Q 027969 207 ESLMEK 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
+|+++.
T Consensus 332 ~~~~~~ 337 (345)
T 2z1m_A 332 EADLKR 337 (345)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-27 Score=182.55 Aligned_cols=208 Identities=28% Similarity=0.354 Sum_probs=152.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcc----------cccccchhHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV----------LCKENKEWYSLAKTLAEEAAW 71 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~----------~~~~~~~~Y~~sK~~~E~~~~ 71 (216)
||.+++++|.+..++++|||+||. ++|+.......+.+++|+++.... .+..+.+.|+.||+.+|.+++
T Consensus 110 g~~~ll~~~~~~~~~~~iv~~SS~-~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~ 188 (342)
T 1y1p_A 110 GTLNALRAAAATPSVKRFVLTSST-VSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188 (342)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCG-GGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEeccH-HHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 789999999853378999999997 777543211113688998753210 011234669999999999999
Q ss_pred HHHHHc--CCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCCC-C-CC--CCCceeehhhhHHHHHHhhcCCCCCc-
Q 027969 72 KFAKEN--GIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGDQ-S-FA--FPYIFVEIRDVVYAHIRALEVPKASG- 142 (216)
Q Consensus 72 ~~~~~~--~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~-~-~~--~~~~~i~v~D~a~~~~~~~~~~~~~~- 142 (216)
.++++. +++++++||++|||+...+.. +....++..+..|.+ . ++ ..++|+|++|+|++++.+++.+...|
T Consensus 189 ~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~ 268 (342)
T 1y1p_A 189 KFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERR 268 (342)
T ss_dssp HHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCcccCCc
Confidence 998765 788999999999999875432 144567777777773 2 22 45689999999999999998765444
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCCCccCCCCccccchHHH-HHhCC---ee-eehhhhHHHHHHHHH
Q 027969 143 RYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-KSLGI---NF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 143 ~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~---~~-~~~~~~i~~~~~~~~ 210 (216)
.++++++.+|+.|+++.+.+.++...++............+|++|+ +.||| .+ ++++++|+++++|++
T Consensus 269 ~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 269 RVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp EEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred eEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCccccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 5666777899999999999999764443322211223467899999 77877 44 899999999998864
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=178.56 Aligned_cols=196 Identities=18% Similarity=0.187 Sum_probs=146.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccc-hhHHHHHHHHHHHHHH-HHHHcCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK-EWYSLAKTLAEEAAWK-FAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~-~~~~~~~ 79 (216)
||.+|+++|.+. ++++|||+||. ++|+........ +++|++ . +. +.|+.+|..+|++++. +.
T Consensus 116 ~~~~l~~a~~~~-~~~~iV~~SS~-~~~g~~~~~~~~-~~~E~~--~------p~~~~Y~~sK~~~E~~~~~s~~----- 179 (333)
T 2q1w_A 116 GGSNVVQAAKKN-NVGRFVYFQTA-LCYGVKPIQQPV-RLDHPR--N------PANSSYAISKSANEDYLEYSGL----- 179 (333)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGGCSCCCSSSB-CTTSCC--C------CTTCHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHh-CCCEEEEECcH-HHhCCCcccCCC-CcCCCC--C------CCCCchHHHHHHHHHHHHhhhC-----
Confidence 689999999998 88999999997 899721100113 778876 1 22 4599999999999987 53
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCC-C-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-A-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDI 156 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el 156 (216)
+++++||+++||++.. ......++..+..+...+ + ...+|+|++|+|++++.+++.+. ++.|+++ +..+++.|+
T Consensus 180 ~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~ 256 (333)
T 2q1w_A 180 DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG-HGAYHFSSGTDVAIKEL 256 (333)
T ss_dssp CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHH
T ss_pred CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHH
Confidence 7999999999999832 224456666666665212 3 56789999999999999998766 6688776 678999999
Q ss_pred HHHHHHhCCCCCCCCCCc-----cCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 157 LKFLREHYPTLLRSGKLE-----EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 157 ~~~i~~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
++.+.+.++...+..... ........+|++|++.+||+| ++++++|+++++|+++.++++
T Consensus 257 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~ 322 (333)
T 2q1w_A 257 YDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG 322 (333)
T ss_dssp HHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence 999999987541111000 111256789999994449999 899999999999999999875
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=177.29 Aligned_cols=193 Identities=12% Similarity=0.126 Sum_probs=145.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++ +|||+||. .+|+. . ..+++|+++..+. +.|+.+|..+|++++.+ ++++
T Consensus 90 ~~~~l~~a~~~~-~~-~~v~~SS~-~v~~~-~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~----~~~~ 151 (315)
T 2ydy_A 90 ASGNLAKEAAAV-GA-FLIYISSD-YVFDG-T----NPPYREEDIPAPL------NLYGKTKLDGEKAVLEN----NLGA 151 (315)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGSCS-S----SCSBCTTSCCCCC------SHHHHHHHHHHHHHHHH----CTTC
T ss_pred HHHHHHHHHHHc-CC-eEEEEchH-HHcCC-C----CCCCCCCCCCCCc------CHHHHHHHHHHHHHHHh----CCCe
Confidence 689999999998 66 89999997 88976 3 5788998776554 56999999999999876 5788
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHH-cCCC--CCC-CCCceeehhhhHHHHHHhhcCC----CCCceEEEe-cCCCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLI-NGDQ--SFA-FPYIFVEIRDVVYAHIRALEVP----KASGRYLLA-GSVAQ 152 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~-~~~~s 152 (216)
+++||+.|||+...+..+....++..+. .+.. ..+ ...+|+|++|+|++++.+++.. ..++.|+++ ++.+|
T Consensus 152 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s 231 (315)
T 2ydy_A 152 AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT 231 (315)
T ss_dssp EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence 9999999999987532123334455555 5552 223 5678999999999999998753 445678766 67899
Q ss_pred HHHHHHHHHHhCCCCC-----CCC-CC-ccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHc
Q 027969 153 HSDILKFLREHYPTLL-----RSG-KL-EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 153 ~~el~~~i~~~~~~~~-----~~~-~~-~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+.|+++.+.+.++... ++. .. .........+|++|++.+||+| ++++++|+++++|++++
T Consensus 232 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 232 KYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp HHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred HHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 9999999999986431 111 00 1122345689999994449988 99999999999998654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=179.72 Aligned_cols=202 Identities=18% Similarity=0.167 Sum_probs=150.8
Q ss_pred cHHHHHHHHhccC----CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~~----~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
||.+|+++|.+.. ++++|||+||. ++|+... ..+++|+++..+. +.|+.||..+|.+++.+.+..
T Consensus 115 g~~~l~~~~~~~~~~~~~~~~iv~~SS~-~~~~~~~----~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~ 183 (342)
T 2hrz_A 115 GTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPL----PYPIPDEFHTTPL------TSYGTQKAICELLLSDYSRRG 183 (342)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGCCSSC----CSSBCTTCCCCCS------SHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccCCCcEEEEeCch-HhhCCCC----CCCcCCCCCCCCc------chHHHHHHHHHHHHHHHHHhc
Confidence 7899999998872 27899999998 8998754 4678998876654 569999999999999998887
Q ss_pred CCcEEEEcCCCccC-CCCCCC--CCccHHHHHHHHcCC-CCCC----CCCceeehhhhHHHHHHhhcCCC----CCceEE
Q 027969 78 GIDLVAIHPGTVIG-PFFQPI--LNFGAEVILNLINGD-QSFA----FPYIFVEIRDVVYAHIRALEVPK----ASGRYL 145 (216)
Q Consensus 78 ~~~~~ilR~~~v~G-~~~~~~--~~~~~~~~~~~~~~~-~~~~----~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~ 145 (216)
+++.+++|++.||| |+.... ......++.....+. ..++ ...+++|++|+|++++.+++.+. .++.|+
T Consensus 184 ~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~n 263 (342)
T 2hrz_A 184 FFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLS 263 (342)
T ss_dssp SCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEE
T ss_pred CCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEE
Confidence 89999999999999 554221 112345566666776 2233 23458999999999999998754 245788
Q ss_pred EecCCCCHHHHHHHHHHhCCCCC---C---CCCCc-c-CCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCC
Q 027969 146 LAGSVAQHSDILKFLREHYPTLL---R---SGKLE-E-KYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFL 215 (216)
Q Consensus 146 ~~~~~~s~~el~~~i~~~~~~~~---~---~~~~~-~-~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l 215 (216)
+++..+|+.|+++.+.+.++... + +.... . .......+|++|++.|||+| ++++++|+++++|++ .|.+
T Consensus 264 i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~ 341 (342)
T 2hrz_A 264 MPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGSL 341 (342)
T ss_dssp CCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred cCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence 87778999999999999886432 1 11100 0 01122358999994499999 899999999999997 5544
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=187.13 Aligned_cols=203 Identities=15% Similarity=0.111 Sum_probs=147.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--cCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--NGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~ 79 (216)
||.+|+++|++. ++++|||+||. ++|+.........+++|+++..+. +.|+.||+++|++++.+++. .++
T Consensus 114 gt~~ll~a~~~~-~~~~iV~~SS~-~vyg~~~~~~~~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~g~ 185 (699)
T 1z45_A 114 GTVVLLELMQQY-NVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGPT------NPYGHTKYAIENILNDLYNSDKKSW 185 (699)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred HHHHHHHHHHHc-CCCEEEEECcH-HHhCCCccccccCCccccCCCCCC------ChHHHHHHHHHHHHHHHHHhccCCC
Confidence 689999999988 88999999997 899764211113567787665543 56999999999999998876 689
Q ss_pred cEEEEcCCCccCCCCCCC--------CCccHHHHHHHHcCC----CCC-------C--CCCceeehhhhHHHHHHhhcCC
Q 027969 80 DLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD----QSF-------A--FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~----~~~-------~--~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++++||++|||+..... ...+..++.....+. ..+ . ..++|||++|+|++++.+++..
T Consensus 186 ~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~ 265 (699)
T 1z45_A 186 KFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYL 265 (699)
T ss_dssp EEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred cEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhh
Confidence 999999999999853210 112334444444432 121 1 3468999999999999998642
Q ss_pred ------C-CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHH
Q 027969 139 ------K-ASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 205 (216)
Q Consensus 139 ------~-~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~ 205 (216)
. .+++|+++ ++.+|+.|+++.+++.++.. ++... .........+|++|+ +.|||+| ++++++|+++
T Consensus 266 ~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~ 344 (699)
T 1z45_A 266 EAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID-LPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDL 344 (699)
T ss_dssp HHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC-CCC---------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHH
T ss_pred hccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCC-CCceecCCCCCccccccCCHHHHHHhcCCCCCCCHHHHHHHH
Confidence 1 13478775 77899999999999987543 12111 122334578999999 7899999 9999999999
Q ss_pred HHHHHHcC
Q 027969 206 IESLMEKG 213 (216)
Q Consensus 206 ~~~~~~~~ 213 (216)
++|+++++
T Consensus 345 ~~w~~~~~ 352 (699)
T 1z45_A 345 WKWTTENP 352 (699)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 99998875
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=168.88 Aligned_cols=203 Identities=16% Similarity=0.104 Sum_probs=148.5
Q ss_pred cHHHHHHHHhcc-CCccEEE-------EcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-HSIKRVV-------LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i-------~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
||.+++++|.+. +++++|| |+||. ++||.... ...+++|+++..+. .+.| ..+|++++++
T Consensus 97 ~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~-~vyg~~~~--~~~~~~E~~~~~~~-----~~~y----~~~E~~~~~~ 164 (364)
T 2v6g_A 97 MFRNVLDAVIPNCPNLKHISLQTGRKHYMGPF-ESYGKIES--HDPPYTEDLPRLKY-----MNFY----YDLEDIMLEE 164 (364)
T ss_dssp HHHHHHHHHTTTCTTCCEEEEECCTHHHHCCG-GGTTTSCC--CCSSBCTTSCCCSS-----CCHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccceEEeccCceEEEech-hhcccccc--CCCCCCccccCCcc-----chhh----HHHHHHHHHH
Confidence 689999999986 3688998 89997 89987421 14678898766542 2447 4589999998
Q ss_pred HHHcC-CcEEEEcCCCccCCCCCCCCCc-cHH-HHHHH--HcCC-CCCC-------CCCceeehhhhHHHHHHhhcCCCC
Q 027969 74 AKENG-IDLVAIHPGTVIGPFFQPILNF-GAE-VILNL--INGD-QSFA-------FPYIFVEIRDVVYAHIRALEVPKA 140 (216)
Q Consensus 74 ~~~~~-~~~~ilR~~~v~G~~~~~~~~~-~~~-~~~~~--~~~~-~~~~-------~~~~~i~v~D~a~~~~~~~~~~~~ 140 (216)
.+..+ ++++++||++|||++.....+. ... ++..+ ..|. ..+. ...+++|++|+|++++.+++++..
T Consensus 165 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~ 244 (364)
T 2v6g_A 165 VEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA 244 (364)
T ss_dssp HTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG
T ss_pred hhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC
Confidence 87776 9999999999999987643222 222 23333 2565 3323 235789999999999999987654
Q ss_pred Cc-eEEEe-cCCCCHHHHHHHHHHhCCCC------CCCCCC--------------------cc----CC----------C
Q 027969 141 SG-RYLLA-GSVAQHSDILKFLREHYPTL------LRSGKL--------------------EE----KY----------Q 178 (216)
Q Consensus 141 ~~-~~~~~-~~~~s~~el~~~i~~~~~~~------~~~~~~--------------------~~----~~----------~ 178 (216)
.+ +|+++ ++.+|+.|+++.+++.++.. .+|.+. .. .. .
T Consensus 245 ~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (364)
T 2v6g_A 245 KNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILG 324 (364)
T ss_dssp TTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHT
T ss_pred CCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccc
Confidence 44 88776 56799999999999998643 222210 00 00 0
Q ss_pred Cc-cccchHHHHHhCCee-eehhhhHHHHHHHHHHcCCCC
Q 027969 179 PT-IKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 216 (216)
Q Consensus 179 ~~-~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~~l~ 216 (216)
.. ..+|++|++.|||+| ++++++++++++|+++.|+||
T Consensus 325 ~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 325 NECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp SCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 33 578999994499998 999999999999999999987
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.9e-25 Score=167.40 Aligned_cols=190 Identities=17% Similarity=0.117 Sum_probs=143.5
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|++++... .+.++||++||+ ++||... ..+++|+++..+. +.|+..|...|... .....+++
T Consensus 85 ~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~----~~~~~E~~p~~~~------~~~~~~~~~~e~~~--~~~~~~~~ 151 (298)
T 4b4o_A 85 TTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSL----TAEYDEDSPGGDF------DFFSNLVTKWEAAA--RLPGDSTR 151 (298)
T ss_dssp HHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCS----SCCBCTTCCCSCS------SHHHHHHHHHHHHH--CCSSSSSE
T ss_pred HHHHHHHHHHHhCCCceEEEEEeee-eeecCCC----CCcccccCCcccc------chhHHHHHHHHHHH--HhhccCCc
Confidence 688999998876 244568999997 9999876 6888998876654 45888888777653 23345899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
++++|++.|||++.. ....++.....+. ..++ ..++|||++|+|+++..+++++...|.||++ ++++|++|
T Consensus 152 ~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e 227 (298)
T 4b4o_A 152 QVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAE 227 (298)
T ss_dssp EEEEEECEEECTTSH----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHH
T ss_pred eeeeeeeeEEcCCCC----chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHH
Confidence 999999999999742 3445555566666 4444 5678999999999999999998888888776 78899999
Q ss_pred HHHHHHHhCCCCC---CCCCCc---------cCCCCccccchHHHHHhCCee--eehhhhHHHHHHH
Q 027969 156 ILKFLREHYPTLL---RSGKLE---------EKYQPTIKVSQERAKSLGINF--TPWEVGVRGCIES 208 (216)
Q Consensus 156 l~~~i~~~~~~~~---~~~~~~---------~~~~~~~~~d~~k~~~lg~~~--~~~~~~i~~~~~~ 208 (216)
+++.+++.++... +|.+.. .....+..++++|++++||++ .+++++|+++++.
T Consensus 228 ~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 228 FAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp HHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred HHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 9999999986432 222211 001124567889998899998 5799999999874
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-24 Score=173.80 Aligned_cols=189 Identities=12% Similarity=0.054 Sum_probs=135.5
Q ss_pred cHHHHHHH-HhccCCccEEEEccccccccc-CCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRS-CAKVHSIKRVVLTSSIGAMLL-NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~-~~~~~~~~~~i~~Ss~~~vy~-~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++ +... ++++|||+||+ ++|| ... ..+++|+++. +. +.|+.+|...|.++..+ +..|+
T Consensus 232 gt~~ll~a~a~~~-~~~r~V~~SS~-~vyg~~~~----~~~~~E~~~~-~~------~~y~~~~~~~E~~~~~~-~~~gi 297 (516)
T 3oh8_A 232 PTKFLAELVAEST-QCTTMISASAV-GFYGHDRG----DEILTEESES-GD------DFLAEVCRDWEHATAPA-SDAGK 297 (516)
T ss_dssp HHHHHHHHHHHCS-SCCEEEEEEEG-GGGCSEEE----EEEECTTSCC-CS------SHHHHHHHHHHHTTHHH-HHTTC
T ss_pred HHHHHHHHHHhcC-CCCEEEEeCcc-eEecCCCC----CCccCCCCCC-Cc------ChHHHHHHHHHHHHHHH-HhCCC
Confidence 68999999 4555 88999999997 9998 333 5788998765 22 55999999999887554 45699
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++++||++|||++. +....++..+..+. ..++ ..++|+|++|+|++++.+++++...+.|+++ ++.+|+.
T Consensus 298 ~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~ 373 (516)
T 3oh8_A 298 RVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNA 373 (516)
T ss_dssp EEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHH
T ss_pred CEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCCCHH
Confidence 999999999999983 23344444444444 3344 4468999999999999999987777788665 7889999
Q ss_pred HHHHHHHHhCCCC---CCCCCCcc----------CCCCccccchHHHHHhCCee-ee-hhhhHHHHHHH
Q 027969 155 DILKFLREHYPTL---LRSGKLEE----------KYQPTIKVSQERAKSLGINF-TP-WEVGVRGCIES 208 (216)
Q Consensus 155 el~~~i~~~~~~~---~~~~~~~~----------~~~~~~~~d~~k~~~lg~~~-~~-~~~~i~~~~~~ 208 (216)
|+++.+++.++.. .+|.+... .......++++|++.|||+| ++ ++++|+++++.
T Consensus 374 el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~ 442 (516)
T 3oh8_A 374 DMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGY 442 (516)
T ss_dssp HHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence 9999999987543 22322110 11224567889998899999 55 99999999864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.9e-22 Score=148.72 Aligned_cols=175 Identities=21% Similarity=0.191 Sum_probs=129.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|.+. ++ +|||+||. .+|+... .+++|+++..+. +.|+.+|..+|.+++. +++
T Consensus 87 ~~~~l~~~~~~~-~~-~iv~~SS~-~~~~~~~-----~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~------~~~ 146 (273)
T 2ggs_A 87 AVRHIVRAGKVI-DS-YIVHISTD-YVFDGEK-----GNYKEEDIPNPI------NYYGLSKLLGETFALQ------DDS 146 (273)
T ss_dssp HHHHHHHHHHHT-TC-EEEEEEEG-GGSCSSS-----CSBCTTSCCCCS------SHHHHHHHHHHHHHCC------TTC
T ss_pred HHHHHHHHHHHh-CC-eEEEEecc-eeEcCCC-----CCcCCCCCCCCC------CHHHHHHHHHHHHHhC------CCe
Confidence 688999999987 66 89999997 8887543 478888766553 5699999999999865 678
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCC-CCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQ-SFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~ 159 (216)
+++||+.|||+. +....++..+..+.. .+. ...+++|++|+|++++.+++.+. .+.|+++++.+|+.|+++.
T Consensus 147 ~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~~e~~~~ 220 (273)
T 2ggs_A 147 LIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK-TGIIHVAGERISRFELALK 220 (273)
T ss_dssp EEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC-CEEEECCCCCEEHHHHHHH
T ss_pred EEEecccccccc-----HHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc-CCeEEECCCcccHHHHHHH
Confidence 999999999821 123344455555552 112 45679999999999999998764 5688776788999999999
Q ss_pred HHHhCCCCC-C--CCC---CccCCCCccccchHHH-HHhCCee--eehhhhH
Q 027969 160 LREHYPTLL-R--SGK---LEEKYQPTIKVSQERA-KSLGINF--TPWEVGV 202 (216)
Q Consensus 160 i~~~~~~~~-~--~~~---~~~~~~~~~~~d~~k~-~~lg~~~--~~~~~~i 202 (216)
+.+.++... + +.. ..........+|++|+ +.|||+| .++++++
T Consensus 221 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 221 IKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp HHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred HHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 999986432 1 111 1122234578999999 6799998 6888765
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=158.37 Aligned_cols=201 Identities=17% Similarity=0.125 Sum_probs=143.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCC-CCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|.+ ++++|||+||. ++ |... ......+++|+++..+. .+.+.|+.||+.+|++++.+.+ .|++
T Consensus 258 gt~~ll~~a~~--~~~~~v~iSS~-~v-G~~~~~~~~~~~~~E~~~~~~~---~~~~~Y~~sK~~~E~~~~~~~~-~gi~ 329 (508)
T 4f6l_B 258 GTVDVIRLAQQ--HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYKGQ---LLTSPYTRSKFYSELKVLEAVN-NGLD 329 (508)
T ss_dssp HHHHHHHHHHT--TTCEEEEEEES-CT-TSEECTTCSCCEECTTCSCSSB---CCCSHHHHHHHHHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHHh--CCCcEEEeCCh-hh-ccCCccCCcCcccccccccccc---cCCCcHHHHHHHHHHHHHHHHH-cCCC
Confidence 78999999998 45899999998 77 4321 11235788998774432 1346699999999999999865 5999
Q ss_pred EEEEcCCCccCCCCCCCC------CccHHHHHHHHcCC--CCC-C-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 81 LVAIHPGTVIGPFFQPIL------NFGAEVILNLINGD--QSF-A-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~--~~~-~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
++++||++|||+...... +.+..++.....+. +.. + ..++|+|++|+|++++.++..+..+++|+++ ++
T Consensus 330 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~ 409 (508)
T 4f6l_B 330 GRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPN 409 (508)
T ss_dssp EEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSC
T ss_pred EEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCC
Confidence 999999999999875431 12456666666655 222 2 6678999999999999999887755688776 67
Q ss_pred CCCHHHHHHHHHHhCCCCCCC--CCCc----------------cCCCCccccchHHH----HHhCCee-eehhhhHHHHH
Q 027969 150 VAQHSDILKFLREHYPTLLRS--GKLE----------------EKYQPTIKVSQERA----KSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~--~~~~----------------~~~~~~~~~d~~k~----~~lg~~~-~~~~~~i~~~~ 206 (216)
++++.|+++.+.+.. ...++ .+.. ........+|+++. +.+||.+ ...++.+++++
T Consensus 410 ~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~ 488 (508)
T 4f6l_B 410 KMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWA 488 (508)
T ss_dssp EEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence 899999999999754 11111 0000 11223456776665 4479998 55577788888
Q ss_pred HHHHH
Q 027969 207 ESLME 211 (216)
Q Consensus 207 ~~~~~ 211 (216)
+++.+
T Consensus 489 ~~~~~ 493 (508)
T 4f6l_B 489 QYIKT 493 (508)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-21 Score=153.86 Aligned_cols=202 Identities=17% Similarity=0.150 Sum_probs=143.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCC-CCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE-TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+ ++++|||+||. .+ |.. .......+++|+++..+.. +.+.|+.||+.+|.+++.+.+ .|++
T Consensus 177 g~~~l~~aa~~--~~~~~v~~SS~-~~-G~~~~~~~~~~~~~E~~~~~~~~---~~~~Y~~sK~~~E~~~~~~~~-~g~~ 248 (427)
T 4f6c_A 177 GTVDVIRLAQQ--HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYKGQL---LTSPYTRSKFYSELKVLEAVN-NGLD 248 (427)
T ss_dssp HHHHHHHHHHH--TTCEEEEEEEG-GG-GSEECSSCSCCEECTTCSCSSCC---CCSHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHHHh--cCCcEEEECch-Hh-CCCccCCCCCccccccccccCCC---CCCchHHHHHHHHHHHHHHHH-cCCC
Confidence 78999999998 56899999998 66 442 1112367899988744321 336699999999999999865 5999
Q ss_pred EEEEcCCCccCCCCCCCC------CccHHHHHHHHcCC-CCC--C-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cC
Q 027969 81 LVAIHPGTVIGPFFQPIL------NFGAEVILNLINGD-QSF--A-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~-~~~--~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~ 149 (216)
++++||++|||+...... +.+..++.....+. ... + ..++|+|++|+|++++.++..+..+++|+++ ++
T Consensus 249 ~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~ 328 (427)
T 4f6c_A 249 GRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPN 328 (427)
T ss_dssp EEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSC
T ss_pred EEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCC
Confidence 999999999999876532 12446666666655 222 2 5678999999999999999887755588776 77
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCC--c---c-------------CCCCccccchHHH----HHhCCeeeeh-hhhHHHHH
Q 027969 150 VAQHSDILKFLREHYPTLLRSGKL--E---E-------------KYQPTIKVSQERA----KSLGINFTPW-EVGVRGCI 206 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~~~~--~---~-------------~~~~~~~~d~~k~----~~lg~~~~~~-~~~i~~~~ 206 (216)
++++.|+++.+.+ ++...++... . . .......+|+++. +.+||.+..+ ++.+++++
T Consensus 329 ~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~ 407 (427)
T 4f6c_A 329 KMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWA 407 (427)
T ss_dssp CEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHH
T ss_pred CCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 8999999999998 4411111100 0 0 0223456776665 3469998444 55888888
Q ss_pred HHHHHc
Q 027969 207 ESLMEK 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
+++++.
T Consensus 408 ~~l~~~ 413 (427)
T 4f6c_A 408 QYIKTI 413 (427)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887663
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=151.03 Aligned_cols=156 Identities=12% Similarity=0.019 Sum_probs=115.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccc-----cccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC-----KENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~-----~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
||.+|+++|.+. ++++|||+||+ ++|+... ..+++|+++..+..+ ....+.|+.||+.+|++++.+++.
T Consensus 193 gt~~ll~aa~~~-~~~~~V~iSS~-~v~~~~~----~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 266 (478)
T 4dqv_A 193 GTAELIRIALTT-KLKPFTYVSTA-DVGAAIE----PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDL 266 (478)
T ss_dssp HHHHHHHHHTSS-SCCCEEEEEEG-GGGTTSC----TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCeEEEEeeh-hhcCccC----CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHH
Confidence 789999999998 88999999997 8998765 567888876544321 112245999999999999999887
Q ss_pred cCCcEEEEcCCCccCCCCCCC----CCccHHHHHHHHc-CC-CCC----------C-CCCceeehhhhHHHHHHhhcC--
Q 027969 77 NGIDLVAIHPGTVIGPFFQPI----LNFGAEVILNLIN-GD-QSF----------A-FPYIFVEIRDVVYAHIRALEV-- 137 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~-~~-~~~----------~-~~~~~i~v~D~a~~~~~~~~~-- 137 (216)
.+++++++||++|||+..... ...+..++..... |. +.. + ..++|+|++|+|++++.++..
T Consensus 267 ~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~ 346 (478)
T 4dqv_A 267 CALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVA 346 (478)
T ss_dssp HCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC
T ss_pred hCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcc
Confidence 799999999999999865221 1122334433332 43 222 1 345899999999999999875
Q ss_pred --CCC-CceEEEe-cCC--CCHHHHHHHHHHh
Q 027969 138 --PKA-SGRYLLA-GSV--AQHSDILKFLREH 163 (216)
Q Consensus 138 --~~~-~~~~~~~-~~~--~s~~el~~~i~~~ 163 (216)
+.. +++|+++ ++. +++.|+++.+.+.
T Consensus 347 ~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 347 GSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp -CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 333 4478776 555 9999999999985
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.2e-20 Score=144.33 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=114.6
Q ss_pred cHHHHHHHHhccCCcc-EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|++. +++ +|||+||. .+|+ .+.|+.+|..+|++++.++++.+++
T Consensus 72 ~~~~l~~a~~~~-~~~~~~v~~Ss~-~~~~-------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~ 124 (369)
T 3st7_A 72 YLDHVLDILTRN-TKKPAILLSSSI-QATQ-------------------------DNPYGESKLQGEQLLREYAEEYGNT 124 (369)
T ss_dssp HHHHHHHHHTTC-SSCCEEEEEEEG-GGGS-------------------------CSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHh-CCCCeEEEeCch-hhcC-------------------------CCCchHHHHHHHHHHHHHHHHhCCC
Confidence 689999999998 776 99999997 8884 1449999999999999999888999
Q ss_pred EEEEcCCCccCCCCCCCCC-ccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCC--CceEEEe-cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILN-FGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA--SGRYLLA-GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~-~~~~s 152 (216)
++++||++|||++..+..+ ....++..+..+. ..+. ..++++|++|+|++++.+++.+.. ++.|+++ ++.+|
T Consensus 125 ~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s 204 (369)
T 3st7_A 125 VYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVT 204 (369)
T ss_dssp EEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEE
T ss_pred EEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCcee
Confidence 9999999999998776543 3456667777777 3333 556899999999999999998776 5578666 67899
Q ss_pred HHHHHHHHHHhCC
Q 027969 153 HSDILKFLREHYP 165 (216)
Q Consensus 153 ~~el~~~i~~~~~ 165 (216)
+.|+++.+.+.++
T Consensus 205 ~~e~~~~~~~~~g 217 (369)
T 3st7_A 205 LGEIVDLLYKFKQ 217 (369)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-20 Score=140.04 Aligned_cols=171 Identities=15% Similarity=0.010 Sum_probs=122.2
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.+|++++++|.+. ++++|||+||. .+|.. + .+|+.+|..+|+++++ .+++
T Consensus 82 ~~~~~l~~a~~~~-~~~~~v~~Ss~-~~~~~-----------------~-------~~y~~sK~~~e~~~~~----~~~~ 131 (286)
T 2zcu_A 82 PQHRNVINAAKAA-GVKFIAYTSLL-HADTS-----------------P-------LGLADEHIETEKMLAD----SGIV 131 (286)
T ss_dssp CHHHHHHHHHHHH-TCCEEEEEEET-TTTTC-----------------C-------STTHHHHHHHHHHHHH----HCSE
T ss_pred HHHHHHHHHHHHc-CCCEEEEECCC-CCCCC-----------------c-------chhHHHHHHHHHHHHH----cCCC
Confidence 3689999999998 88999999997 66610 0 1399999999999864 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHH-cCCCCCC---CCCceeehhhhHHHHHHhhcCCCC-CceEEEe-cCCCCHH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLI-NGDQSFA---FPYIFVEIRDVVYAHIRALEVPKA-SGRYLLA-GSVAQHS 154 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~~ 154 (216)
++++||+.++++.. .++.... .+...++ ...+|+|++|+|+++..++..+.. ++.|+++ ++.+|+.
T Consensus 132 ~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~ 203 (286)
T 2zcu_A 132 YTLLRNGWYSENYL--------ASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLT 203 (286)
T ss_dssp EEEEEECCBHHHHH--------TTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHH
T ss_pred eEEEeChHHhhhhH--------HHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHH
Confidence 99999987766431 1122222 2332122 667899999999999999987544 4478776 5589999
Q ss_pred HHHHHHHHhCCCC----CCCCCCcc------CC----------------CCccccchHHH-HHhCCeeeehhhhHHHHHH
Q 027969 155 DILKFLREHYPTL----LRSGKLEE------KY----------------QPTIKVSQERA-KSLGINFTPWEVGVRGCIE 207 (216)
Q Consensus 155 el~~~i~~~~~~~----~~~~~~~~------~~----------------~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~ 207 (216)
|+++.+.+.++.. .+|..... .. ......|++|+ +.|||.+++++++++++++
T Consensus 204 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l~~~~~ 283 (286)
T 2zcu_A 204 QLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFN 283 (286)
T ss_dssp HHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHHHGGGC
T ss_pred HHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHHHHHHh
Confidence 9999999998643 12211000 00 01245678899 7799877999999999998
Q ss_pred HH
Q 027969 208 SL 209 (216)
Q Consensus 208 ~~ 209 (216)
|+
T Consensus 284 ~~ 285 (286)
T 2zcu_A 284 VN 285 (286)
T ss_dssp --
T ss_pred hc
Confidence 86
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-19 Score=133.87 Aligned_cols=169 Identities=14% Similarity=0.056 Sum_probs=121.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|++. ++++|||+||. .+|.. + .+|+.+|..+|++++. .++++
T Consensus 86 ~~~~l~~a~~~~-~~~~~v~~Ss~-~~~~~-----------------~-------~~y~~~K~~~E~~~~~----~~~~~ 135 (287)
T 2jl1_A 86 QHANVVKAARDA-GVKHIAYTGYA-FAEES-----------------I-------IPLAHVHLATEYAIRT----TNIPY 135 (287)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEET-TGGGC-----------------C-------STHHHHHHHHHHHHHH----TTCCE
T ss_pred HHHHHHHHHHHc-CCCEEEEECCC-CCCCC-----------------C-------CchHHHHHHHHHHHHH----cCCCe
Confidence 689999999998 88999999997 66521 0 1399999999999854 58999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe-cCCCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSVAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~el 156 (216)
+++||+.++|+.... .+.. .+..+. . ..+ +.++|+|++|+|+++..+++.+...+ .|+++ ++.+|+.|+
T Consensus 136 ~ilrp~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~ 209 (287)
T 2jl1_A 136 TFLRNALYTDFFVNE---GLRA---STESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDEL 209 (287)
T ss_dssp EEEEECCBHHHHSSG---GGHH---HHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHH
T ss_pred EEEECCEeccccchh---hHHH---HhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHH
Confidence 999999988864211 1211 122344 2 223 67789999999999999998764444 78776 568999999
Q ss_pred HHHHHHhCCCC----CCCCCCcc------CC----------------CCccccchHHH-HHhCCeeeehhhhHHHHHH
Q 027969 157 LKFLREHYPTL----LRSGKLEE------KY----------------QPTIKVSQERA-KSLGINFTPWEVGVRGCIE 207 (216)
Q Consensus 157 ~~~i~~~~~~~----~~~~~~~~------~~----------------~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~ 207 (216)
++.+.+.++.. .+|..... .. ......|++|+ +.|| .+++++++++++++
T Consensus 210 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 210 AQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SCCCHHHHHHHHHT
T ss_pred HHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-CCCCHHHHHHHHhc
Confidence 99999998643 12211000 00 12345678899 7799 55999999999875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=127.29 Aligned_cols=132 Identities=19% Similarity=0.173 Sum_probs=97.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|.+. ++++|||+||. .+|.... ....|+++..+. ++|+.+|..+|.+++.+.+..++++
T Consensus 91 ~~~~l~~~~~~~-~~~~~v~~Ss~-~~~~~~~-----~~~~~~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~ 157 (227)
T 3dhn_A 91 VYLTIIDGVKKA-GVNRFLMVGGA-GSLFIAP-----GLRLMDSGEVPE------NILPGVKALGEFYLNFLMKEKEIDW 157 (227)
T ss_dssp HHHHHHHHHHHT-TCSEEEEECCS-TTSEEET-----TEEGGGTTCSCG------GGHHHHHHHHHHHHHTGGGCCSSEE
T ss_pred HHHHHHHHHHHh-CCCEEEEeCCh-hhccCCC-----CCccccCCcchH------HHHHHHHHHHHHHHHHHhhccCccE
Confidence 689999999998 88999999998 5543332 223344444333 5699999999999998887779999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~ 154 (216)
+++||+.|||++..... .. ..+. +... ..++|+|++|+|++++.+++++...| +|+++ +++.++.
T Consensus 158 ~ilrp~~v~g~~~~~~~-~~-------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 158 VFFSPAADMRPGVRTGR-YR-------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp EEEECCSEEESCCCCCC-CE-------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred EEEeCCcccCCCccccc-ee-------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence 99999999999865432 11 1222 3333 55899999999999999999987655 78655 6777764
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.7e-18 Score=127.03 Aligned_cols=148 Identities=18% Similarity=0.154 Sum_probs=112.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|.+. ++++|||+||. .+|+.... ..+++|+++..+. +.|+.+|..+|.+++.+.+..++++
T Consensus 89 ~~~~l~~a~~~~-~~~~iv~~SS~-~~~~~~~~---~~~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~ 157 (267)
T 3ay3_A 89 GAYNLYEAARNL-GKPRIVFASSN-HTIGYYPR---TTRIDTEVPRRPD------SLYGLSKCFGEDLASLYYHKFDIET 157 (267)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGSTTSBT---TSCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHh-CCCEEEEeCCH-HHhCCCCC---CCCCCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHcCCCE
Confidence 688999999988 88999999997 88876431 4678898776554 5699999999999999887789999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCC-ceEEEecCCCCHHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS-GRYLLAGSVAQHSDILKFL 160 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~~~~~s~~el~~~i 160 (216)
+++||+++|+... . +. ...+|+|++|+|+++..+++.+..+ ++|+..+..
T Consensus 158 ~~lrp~~v~~~~~------~---------~~----~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~---------- 208 (267)
T 3ay3_A 158 LNIRIGSCFPKPK------D---------AR----MMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN---------- 208 (267)
T ss_dssp EEEEECBCSSSCC------S---------HH----HHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC----------
T ss_pred EEEeceeecCCCC------C---------CC----eeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc----------
Confidence 9999999995321 0 00 2356899999999999999877553 356553211
Q ss_pred HHhCCCCCCCCCCccCCCCccccchHHHHHhCCee-eehhhhHHHHHH
Q 027969 161 REHYPTLLRSGKLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIE 207 (216)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~ 207 (216)
.....|..+++.|||+| .+++++++++.+
T Consensus 209 ------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 209 ------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp ------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 11234455556789999 899999988764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=130.64 Aligned_cols=133 Identities=14% Similarity=0.152 Sum_probs=105.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~ 78 (216)
||.+++++|.+. ++++||++||. ..+.+ .+.|+.||..+|.+++.+.+. .+
T Consensus 121 gt~~l~~aa~~~-~v~~~V~~SS~-~~~~p------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~g 174 (344)
T 2gn4_A 121 GASNVINACLKN-AISQVIALSTD-KAANP------------------------INLYGATKLCSDKLFVSANNFKGSSQ 174 (344)
T ss_dssp HHHHHHHHHHHT-TCSEEEEECCG-GGSSC------------------------CSHHHHHHHHHHHHHHHGGGCCCSSC
T ss_pred HHHHHHHHHHhC-CCCEEEEecCC-ccCCC------------------------ccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 789999999998 89999999997 44311 134999999999999988753 47
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCH
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQH 153 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~ 153 (216)
++++++||++|||+... ..+.++..+..|. + .+. ..++|+|++|+|++++.++++...+.+|++.+..+++
T Consensus 175 ~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~ 250 (344)
T 2gn4_A 175 TQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKM 250 (344)
T ss_dssp CEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCCEEEH
T ss_pred cEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCCcEEH
Confidence 99999999999998732 4455666666665 2 122 3457999999999999999876545588888777999
Q ss_pred HHHHHHHHHhC
Q 027969 154 SDILKFLREHY 164 (216)
Q Consensus 154 ~el~~~i~~~~ 164 (216)
.|+++.+.+.+
T Consensus 251 ~el~~~i~~~~ 261 (344)
T 2gn4_A 251 TDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHHHHhC
Confidence 99999998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=117.42 Aligned_cols=124 Identities=19% Similarity=0.169 Sum_probs=95.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|++. ++++||++||. .+++. .+.+| . +..+.+.|+.+|..+|++++ +..++++
T Consensus 85 ~~~~l~~a~~~~-~~~~iv~~SS~-~~~~~-------~~~~e-~------~~~~~~~Y~~sK~~~e~~~~---~~~~i~~ 145 (219)
T 3dqp_A 85 GAVKLMQAAEKA-EVKRFILLSTI-FSLQP-------EKWIG-A------GFDALKDYYIAKHFADLYLT---KETNLDY 145 (219)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCT-TTTCG-------GGCCS-H------HHHHTHHHHHHHHHHHHHHH---HSCCCEE
T ss_pred HHHHHHHHHHHh-CCCEEEEECcc-cccCC-------Ccccc-c------ccccccHHHHHHHHHHHHHH---hccCCcE
Confidence 689999999998 88999999997 66542 23344 1 11234669999999999987 4569999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEecCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~el~~~ 159 (216)
+++||+.+||+....... ++ ...+++|++|+|++++.++.++...+ .|+++++..+++|+.+.
T Consensus 146 ~ilrp~~v~g~~~~~~~~---------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~ 210 (219)
T 3dqp_A 146 TIIQPGALTEEEATGLID---------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALES 210 (219)
T ss_dssp EEEEECSEECSCCCSEEE---------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHT
T ss_pred EEEeCceEecCCCCCccc---------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHH
Confidence 999999999986532210 12 57789999999999999998876545 78887667999998764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=124.10 Aligned_cols=183 Identities=13% Similarity=0.045 Sum_probs=116.7
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++.+|+++|++. + +++||+ |+ ||. ..+|+++..+. +.|+.+|+.+|+.+++ .+++
T Consensus 98 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~--------~~~e~~~~~p~------~~y~~sK~~~e~~l~~----~g~~ 153 (346)
T 3i6i_A 98 DQIALVKAMKAV-GTIKRFLP-SE----FGH--------DVNRADPVEPG------LNMYREKRRVRQLVEE----SGIP 153 (346)
T ss_dssp GHHHHHHHHHHH-CCCSEEEC-SC----CSS--------CTTTCCCCTTH------HHHHHHHHHHHHHHHH----TTCC
T ss_pred HHHHHHHHHHHc-CCceEEee-cc----cCC--------CCCccCcCCCc------chHHHHHHHHHHHHHH----cCCC
Confidence 689999999998 6 999986 43 332 23455444433 5599999999999865 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe--cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA--GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~--~~~~s 152 (216)
++++||+.++|...... .........+. ..++ ..++|+|++|+|++++.++..+...+ .|++. ++.+|
T Consensus 154 ~tivrpg~~~g~~~~~~----~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s 229 (346)
T 3i6i_A 154 FTYICCNSIASWPYYNN----IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLN 229 (346)
T ss_dssp BEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEC
T ss_pred EEEEEecccccccCccc----cccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCC
Confidence 99999999999654321 11111111222 2222 45689999999999999998875534 55544 57899
Q ss_pred HHHHHHHHHHhCCCCC----CCCCCc----cCC-----------------CCccccch-----HHH-HH-hCCeeeehhh
Q 027969 153 HSDILKFLREHYPTLL----RSGKLE----EKY-----------------QPTIKVSQ-----ERA-KS-LGINFTPWEV 200 (216)
Q Consensus 153 ~~el~~~i~~~~~~~~----~~~~~~----~~~-----------------~~~~~~d~-----~k~-~~-lg~~~~~~~~ 200 (216)
+.|+++.+.+.++... ++.... ... .....++. .++ +. -++++++++|
T Consensus 230 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~~~e 309 (346)
T 3i6i_A 230 INELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEE 309 (346)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCCCHHH
T ss_pred HHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcCcHHH
Confidence 9999999999986431 111100 000 00001111 123 22 3778899999
Q ss_pred hHHHHHHHHHHc
Q 027969 201 GVRGCIESLMEK 212 (216)
Q Consensus 201 ~i~~~~~~~~~~ 212 (216)
.++++++|+.++
T Consensus 310 ~l~~~~~~~~~~ 321 (346)
T 3i6i_A 310 CFGEYIVKMEEK 321 (346)
T ss_dssp HHHHHHCC----
T ss_pred HHHHHHHHhhcc
Confidence 999999988764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=110.90 Aligned_cols=126 Identities=12% Similarity=0.100 Sum_probs=89.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
+|++++++|++. + ++||++||++.+|+.... ...+.+|+..+. +.++|+.+|..+|.+ ..+.+..++++
T Consensus 85 ~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~--~~~~~~~~~~~~------~~~~y~~sK~~~e~~-~~~~~~~~i~~ 153 (224)
T 3h2s_A 85 FATHLVSLLRNS-D-TLAVFILGSASLAMPGAD--HPMILDFPESAA------SQPWYDGALYQYYEY-QFLQMNANVNW 153 (224)
T ss_dssp HHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS--SCGGGGCCGGGG------GSTTHHHHHHHHHHH-HHHTTCTTSCE
T ss_pred HHHHHHHHHHHc-C-CcEEEEecceeeccCCCC--ccccccCCCCCc------cchhhHHHHHHHHHH-HHHHhcCCCcE
Confidence 689999999998 7 899999998566654331 013444443322 235699999999954 45555669999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
+++||+.+||++.... . ..+. ...+ ...+++|++|+|++++.+++++...+ +|++.+
T Consensus 154 ~ivrp~~v~g~~~~~~---~-------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~ 214 (224)
T 3h2s_A 154 IGISPSEAFPSGPATS---Y-------VAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD 214 (224)
T ss_dssp EEEEECSBCCCCCCCC---E-------EEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred EEEcCccccCCCcccC---c-------eecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence 9999999999854321 1 1122 3334 66789999999999999999887655 786664
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.62 E-value=9e-16 Score=112.30 Aligned_cols=132 Identities=15% Similarity=0.206 Sum_probs=75.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH-HcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK-ENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~ 80 (216)
++++++++|++. +++++|++||.+.+|+... ..+..|+.+..+. +.|+.+|..+|.+. ...+ ..+++
T Consensus 82 ~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~----~~~~~~~~~~~~~------~~y~~~k~~~e~~~-~~~~~~~gi~ 149 (221)
T 3ew7_A 82 SLDHLISVLNGT-VSPRLLVVGGAASLQIDED----GNTLLESKGLREA------PYYPTARAQAKQLE-HLKSHQAEFS 149 (221)
T ss_dssp HHHHHHHHHCSC-CSSEEEEECCCC-----------------------C------CCSCCHHHHHHHHH-HHHTTTTTSC
T ss_pred HHHHHHHHHHhc-CCceEEEEecceEEEcCCC----CccccccCCCCCH------HHHHHHHHHHHHHH-HHHhhccCcc
Confidence 689999999998 7899999999866666543 3355565544433 45999999999973 3333 56999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEec-CCCCH
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG-SVAQH 153 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~s~ 153 (216)
++++||+.+||++.... . + . ..+. ..+. ...+++|++|+|++++.+++++...+ +|++.+ ...+.
T Consensus 150 ~~ivrp~~v~g~~~~~~--~----~-~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~ 218 (221)
T 3ew7_A 150 WTYISPSAMFEPGERTG--D----Y-Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH 218 (221)
T ss_dssp EEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred EEEEeCcceecCCCccC--c----e-E-eccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence 99999999999843211 0 1 0 1122 2222 44579999999999999999887655 787664 34443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=115.97 Aligned_cols=168 Identities=14% Similarity=0.137 Sum_probs=108.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++++++++|++. ++++|||+||. ... . ..++. +...+..+|+.+ +..++++
T Consensus 85 ~~~~l~~aa~~~-gv~~iv~~Ss~-~~~---~----~~~~~----------------~~~~~~~~e~~~----~~~g~~~ 135 (289)
T 3e48_A 85 EVENLVYAAKQS-GVAHIIFIGYY-ADQ---H----NNPFH----------------MSPYFGYASRLL----STSGIDY 135 (289)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEES-CCS---T----TCCST----------------THHHHHHHHHHH----HHHCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEEccc-CCC---C----CCCCc----------------cchhHHHHHHHH----HHcCCCE
Confidence 578999999998 89999999995 211 1 11110 111122344443 3459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCC-CceEEEecCCCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA-SGRYLLAGSVAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~~~s~~el 156 (216)
+++||+.++|+.. .++..+..+. ..++ ..++|+|++|+|+++..++..+.. ++.|+++++.+|+.|+
T Consensus 136 ~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~ 207 (289)
T 3e48_A 136 TYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKEL 207 (289)
T ss_dssp EEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHH
T ss_pred EEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHH
Confidence 9999999998631 2333433333 3334 566899999999999999988765 4478666888999999
Q ss_pred HHHHHHhCCCCC----CCCCCc-----c--------------CCCCccccchHHH-HHhCCeeeehhhhHHHHH
Q 027969 157 LKFLREHYPTLL----RSGKLE-----E--------------KYQPTIKVSQERA-KSLGINFTPWEVGVRGCI 206 (216)
Q Consensus 157 ~~~i~~~~~~~~----~~~~~~-----~--------------~~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~ 206 (216)
++.+.+.++... ++.... . ........+...+ +.+|++|+++++.+++..
T Consensus 208 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~~ 281 (289)
T 3e48_A 208 AAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQENI 281 (289)
T ss_dssp HHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHHHC--
T ss_pred HHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHHHHHH
Confidence 999999986431 111000 0 0001122345556 778999999998887654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.8e-15 Score=113.00 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=98.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++++||++||. .+|+.... ..+++|+.+..+. +.|+.||..+|.+++.++++.++++
T Consensus 90 g~~~l~~a~~~~-~~~~iv~~SS~-~~~g~~~~---~~~~~e~~~~~~~------~~Y~~sK~~~e~~~~~~a~~~g~~~ 158 (267)
T 3rft_A 90 GLYNLYEAARAH-GQPRIVFASSN-HTIGYYPQ---TERLGPDVPARPD------GLYGVSKCFGENLARMYFDKFGQET 158 (267)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGGTTSBT---TSCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHc-CCCEEEEEcch-HHhCCCCC---CCCCCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHhCCeE
Confidence 789999999988 78999999998 77764331 5678888766554 5599999999999999998889999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-e-EEEecCCCCHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R-YLLAGSVAQHSDI 156 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~-~~~~~~~~s~~el 156 (216)
+++||+.|+|+..... ...+|+|++|+++++..+++.+..++ . |++++++.++.++
T Consensus 159 ~~vr~~~v~~~~~~~~-------------------~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 216 (267)
T 3rft_A 159 ALVRIGSCTPEPNNYR-------------------MLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDN 216 (267)
T ss_dssp EEEEECBCSSSCCSTT-------------------HHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCC
T ss_pred EEEEeecccCCCCCCC-------------------ceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccC
Confidence 9999999998742211 23468999999999999998877665 4 4555666555544
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=112.01 Aligned_cols=124 Identities=16% Similarity=0.208 Sum_probs=92.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|++. ++++||++||. ..+.. +..+ .+.+.|+.+|..+|.+++ ..++++
T Consensus 110 ~~~~l~~a~~~~-~~~~iv~~SS~-~~~~~-----------~~~~-------~~~~~Y~~sK~~~e~~~~----~~gi~~ 165 (236)
T 3e8x_A 110 GAIKTIQEAEKR-GIKRFIMVSSV-GTVDP-----------DQGP-------MNMRHYLVAKRLADDELK----RSSLDY 165 (236)
T ss_dssp HHHHHHHHHHHH-TCCEEEEECCT-TCSCG-----------GGSC-------GGGHHHHHHHHHHHHHHH----HSSSEE
T ss_pred HHHHHHHHHHHc-CCCEEEEEecC-CCCCC-----------CCCh-------hhhhhHHHHHHHHHHHHH----HCCCCE
Confidence 689999999988 88999999996 43321 1111 122559999999999886 459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEecCCCCHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKF 159 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~el~~~ 159 (216)
+++||+.++|+........ .... +..+++|++|+|+++..+++.+...+ .|+++++..++.|+++.
T Consensus 166 ~~lrpg~v~~~~~~~~~~~------------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~ 233 (236)
T 3e8x_A 166 TIVRPGPLSNEESTGKVTV------------SPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQ 233 (236)
T ss_dssp EEEEECSEECSCCCSEEEE------------ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHT
T ss_pred EEEeCCcccCCCCCCeEEe------------ccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHH
Confidence 9999999999864321100 0011 45789999999999999998875444 78777667999999987
Q ss_pred HH
Q 027969 160 LR 161 (216)
Q Consensus 160 i~ 161 (216)
++
T Consensus 234 i~ 235 (236)
T 3e8x_A 234 LG 235 (236)
T ss_dssp C-
T ss_pred hc
Confidence 65
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=108.51 Aligned_cols=134 Identities=17% Similarity=0.139 Sum_probs=95.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+++++|.+. ++++||++||. .++... .+. .+- ..+.|+.+|..+|.+++. .++++
T Consensus 112 ~~~~l~~~~~~~-~~~~iv~~SS~-~~~~~~------~~~------~~~----~~~~y~~sK~~~e~~~~~----~~i~~ 169 (253)
T 1xq6_A 112 GQKNQIDAAKVA-GVKHIVVVGSM-GGTNPD------HPL------NKL----GNGNILVWKRKAEQYLAD----SGTPY 169 (253)
T ss_dssp HHHHHHHHHHHH-TCSEEEEEEET-TTTCTT------CGG------GGG----GGCCHHHHHHHHHHHHHT----SSSCE
T ss_pred HHHHHHHHHHHc-CCCEEEEEcCc-cCCCCC------Ccc------ccc----cchhHHHHHHHHHHHHHh----CCCce
Confidence 688999999998 88999999997 554211 111 000 002388999999998854 58999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe-cC---CCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GS---VAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~---~~s~~ 154 (216)
+++||+.+||+...... ...+. ..+. +...++|++|+|+++..+++.+...+ .|+++ ++ .+|+.
T Consensus 170 ~~vrpg~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~ 240 (253)
T 1xq6_A 170 TIIRAGGLLDKEGGVRE---------LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 240 (253)
T ss_dssp EEEEECEEECSCSSSSC---------EEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCC
T ss_pred EEEecceeecCCcchhh---------hhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHH
Confidence 99999999998743210 01111 1112 45679999999999999998765444 77665 33 58999
Q ss_pred HHHHHHHHhCCC
Q 027969 155 DILKFLREHYPT 166 (216)
Q Consensus 155 el~~~i~~~~~~ 166 (216)
|+++.+.+.++.
T Consensus 241 e~~~~~~~~~g~ 252 (253)
T 1xq6_A 241 DFKALFSQVTSR 252 (253)
T ss_dssp CHHHHHHTCCCC
T ss_pred HHHHHHHHHhCC
Confidence 999999987754
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.2e-15 Score=107.82 Aligned_cols=111 Identities=17% Similarity=0.116 Sum_probs=82.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc-
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID- 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~- 80 (216)
++.+++++|.+. ++++||++||. .+|+.. .+.|+.+|..+|++++. .+++
T Consensus 93 ~~~~l~~~~~~~-~~~~~v~~Ss~-~~~~~~-----------------------~~~y~~sK~~~e~~~~~----~~~~~ 143 (215)
T 2a35_A 93 LPLAVGKRALEM-GARHYLVVSAL-GADAKS-----------------------SIFYNRVKGELEQALQE----QGWPQ 143 (215)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCT-TCCTTC-----------------------SSHHHHHHHHHHHHHTT----SCCSE
T ss_pred HHHHHHHHHHHc-CCCEEEEECCc-ccCCCC-----------------------ccHHHHHHHHHHHHHHH----cCCCe
Confidence 678999999998 88999999997 777421 13499999999999865 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 148 (216)
++++||+.+||+..... ++..+......+. +.++++|++|+|+++..+++++. ++.|++++
T Consensus 144 ~~~vrp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~ 205 (215)
T 2a35_A 144 LTIARPSLLFGPREEFR------LAEILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVES 205 (215)
T ss_dssp EEEEECCSEESTTSCEE------GGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEH
T ss_pred EEEEeCceeeCCCCcch------HHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-CCceEEcH
Confidence 99999999999976421 1111111112223 55689999999999999998775 66887763
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.6e-14 Score=107.99 Aligned_cols=174 Identities=10% Similarity=0.002 Sum_probs=116.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++++++++|++. ++++||++||. .+|+... .. + ...|+.+|..+|+++++ .++++
T Consensus 94 ~~~~~~~aa~~~-gv~~iv~~S~~-~~~~~~~----------~~---~------~~~y~~sK~~~e~~~~~----~gi~~ 148 (299)
T 2wm3_A 94 QGKLLADLARRL-GLHYVVYSGLE-NIKKLTA----------GR---L------AAAHFDGKGEVEEYFRD----IGVPM 148 (299)
T ss_dssp HHHHHHHHHHHH-TCSEEEECCCC-CHHHHTT----------TS---C------CCHHHHHHHHHHHHHHH----HTCCE
T ss_pred HHHHHHHHHHHc-CCCEEEEEcCc-cccccCC----------Cc---c------cCchhhHHHHHHHHHHH----CCCCE
Confidence 578999999998 89999998885 7775321 11 1 13499999999999865 38999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCC--C-CCCceeehhhhHHHHHHhhcCCC--CCceEEEecCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSF--A-FPYIFVEIRDVVYAHIRALEVPK--ASGRYLLAGSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~--~-~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~s~ 153 (216)
+++||+.+||+..... ... ....|. ..+ + ...+|+|++|+|+++..++..+. .+..|+++++.+|+
T Consensus 149 ~ilrp~~~~~~~~~~~---~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~ 222 (299)
T 2wm3_A 149 TSVRLPCYFENLLSHF---LPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTA 222 (299)
T ss_dssp EEEECCEEGGGGGTTT---CCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECH
T ss_pred EEEeecHHhhhchhhc---CCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCH
Confidence 9999999999754210 000 012231 122 3 56689999999999999998642 24478877778999
Q ss_pred HHHHHHHHHhCCCC----CCCCCCcc----CC-----------CCccccchHHHHHhCCeeeehhhhHHHHH
Q 027969 154 SDILKFLREHYPTL----LRSGKLEE----KY-----------QPTIKVSQERAKSLGINFTPWEVGVRGCI 206 (216)
Q Consensus 154 ~el~~~i~~~~~~~----~~~~~~~~----~~-----------~~~~~~d~~k~~~lg~~~~~~~~~i~~~~ 206 (216)
.|+++.+.+.++.. .++..... +. ......+....+.+|-+|+++++.+++..
T Consensus 223 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (299)
T 2wm3_A 223 EEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHK 294 (299)
T ss_dssp HHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCCCHHHHHHHHG
T ss_pred HHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCCCHHHHHHhCh
Confidence 99999999988643 22221100 00 00011122222667888888888887653
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.7e-14 Score=109.54 Aligned_cols=134 Identities=11% Similarity=0.106 Sum_probs=96.0
Q ss_pred HHHHHHHHhccCC-ccEEEEccccc-ccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 3 TLNVLRSCAKVHS-IKRVVLTSSIG-AMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 3 t~~ll~~~~~~~~-~~~~i~~Ss~~-~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
+++++++|++. + +++|||+||.+ ..|+. . +.+.|+.||..+|++++.. +++
T Consensus 92 ~~~l~~aa~~~-g~v~~~V~~SS~~~~~~~~----------------~------~~~~y~~sK~~~E~~~~~~----gi~ 144 (352)
T 1xgk_A 92 GKDLADAAKRA-GTIQHYIYSSMPDHSLYGP----------------W------PAVPMWAPKFTVENYVRQL----GLP 144 (352)
T ss_dssp HHHHHHHHHHH-SCCSEEEEEECCCGGGTSS----------------C------CCCTTTHHHHHHHHHHHTS----SSC
T ss_pred HHHHHHHHHHc-CCccEEEEeCCccccccCC----------------C------CCccHHHHHHHHHHHHHHc----CCC
Confidence 48999999998 7 89999999973 13321 0 1134999999999998653 899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHH--HHcCCC----CC-C-CCCceeeh-hhhHHHHHHhhcCCC---CCceEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILN--LINGDQ----SF-A-FPYIFVEI-RDVVYAHIRALEVPK---ASGRYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~--~~~~~~----~~-~-~~~~~i~v-~D~a~~~~~~~~~~~---~~~~~~~~~ 148 (216)
++++||+ +||++...... .++.. ...|.. .. + +..+++|+ +|+|+++..++..+. .++.|++++
T Consensus 145 ~~ivrpg-~~g~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~ 220 (352)
T 1xgk_A 145 STFVYAG-IYNNNFTSLPY---PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF 220 (352)
T ss_dssp EEEEEEC-EEGGGCBSSSC---SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred EEEEecc-eecCCchhccc---ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec
Confidence 9999976 78987543210 11111 123331 11 2 56689999 899999999997652 355888887
Q ss_pred CCCCHHHHHHHHHHhCCCC
Q 027969 149 SVAQHSDILKFLREHYPTL 167 (216)
Q Consensus 149 ~~~s~~el~~~i~~~~~~~ 167 (216)
+.+|+.|+++.+.+.++..
T Consensus 221 ~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 221 ETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp EEECHHHHHHHHHHHHTSC
T ss_pred CCCCHHHHHHHHHHHHCCC
Confidence 7899999999999988643
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-12 Score=95.14 Aligned_cols=115 Identities=16% Similarity=0.045 Sum_probs=82.7
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC-c
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI-D 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~ 80 (216)
|+.++++++.+. ++++||++||. .+|+.. .+.|+.+|...|.+++.+ ++ +
T Consensus 111 ~~~~~~~~~~~~-~~~~iv~~SS~-~~~~~~-----------------------~~~Y~~sK~~~e~~~~~~----~~~~ 161 (242)
T 2bka_A 111 YVLKSAELAKAG-GCKHFNLLSSK-GADKSS-----------------------NFLYLQVKGEVEAKVEEL----KFDR 161 (242)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCT-TCCTTC-----------------------SSHHHHHHHHHHHHHHTT----CCSE
T ss_pred HHHHHHHHHHHC-CCCEEEEEccC-cCCCCC-----------------------cchHHHHHHHHHHHHHhc----CCCC
Confidence 678999999988 78899999997 777421 134999999999998654 78 5
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
++++||+.++|+...+. ....+........+...+...++|++|+|++++.++..+...+.+++.
T Consensus 162 ~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~ 226 (242)
T 2bka_A 162 YSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLE 226 (242)
T ss_dssp EEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEE
T ss_pred eEEEcCceecCCCCCCc--HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccccCeeEee
Confidence 99999999999875321 111222222222121113346999999999999999987777777664
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=87.98 Aligned_cols=114 Identities=17% Similarity=0.186 Sum_probs=80.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+++++|.+. ++++||++||. .+|+... ..+. +.+.|+.+|..+|++++ ..++++
T Consensus 90 ~~~~~~~~~~~~-~~~~~v~~Ss~-~~~~~~~----~~~~-------------~~~~y~~~K~~~e~~~~----~~~i~~ 146 (206)
T 1hdo_A 90 GARNIVAAMKAH-GVDKVVACTSA-FLLWDPT----KVPP-------------RLQAVTDDHIRMHKVLR----ESGLKY 146 (206)
T ss_dssp HHHHHHHHHHHH-TCCEEEEECCG-GGTSCTT----CSCG-------------GGHHHHHHHHHHHHHHH----HTCSEE
T ss_pred HHHHHHHHHHHh-CCCeEEEEeee-eeccCcc----cccc-------------cchhHHHHHHHHHHHHH----hCCCCE
Confidence 578999999998 88999999997 8886543 1110 22559999999999984 358999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
+++||+.+ +++..... ... ...+. +. .+++|++|+|+++..+++++...| .|+++++
T Consensus 147 ~~lrp~~~-~~~~~~~~-~~~-----~~~~~---~~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g 204 (206)
T 1hdo_A 147 VAVMPPHI-GDQPLTGA-YTV-----TLDGR---GP-SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204 (206)
T ss_dssp EEECCSEE-ECCCCCSC-CEE-----ESSSC---SS-CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred EEEeCCcc-cCCCCCcc-eEe-----cccCC---CC-CCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence 99999998 43321110 000 00110 11 589999999999999998865544 6776643
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=9.1e-12 Score=95.47 Aligned_cols=137 Identities=17% Similarity=0.255 Sum_probs=90.9
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++.+++++|++. + +++||+ |+ ||... +|+.+..+. .+.| .+|..+|+.+++ .+++
T Consensus 92 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~~~--------~~~~~~~p~-----~~~y-~sK~~~e~~~~~----~~~~ 147 (308)
T 1qyc_A 92 SQVNIIKAIKEV-GTVKRFFP-SE----FGNDV--------DNVHAVEPA-----KSVF-EVKAKVRRAIEA----EGIP 147 (308)
T ss_dssp GGHHHHHHHHHH-CCCSEEEC-SC----CSSCT--------TSCCCCTTH-----HHHH-HHHHHHHHHHHH----HTCC
T ss_pred hHHHHHHHHHhc-CCCceEee-cc----cccCc--------cccccCCcc-----hhHH-HHHHHHHHHHHh----cCCC
Confidence 578999999998 6 999984 43 33211 222222221 1348 999999998864 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eEE-Ee-cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYL-LA-GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~-~~-~~~~s 152 (216)
++++||+.++|......... ......+. ..++ ...+|+|++|+|+++..++..+...+ .|+ .+ ++.+|
T Consensus 148 ~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s 223 (308)
T 1qyc_A 148 YTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLS 223 (308)
T ss_dssp BEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEE
T ss_pred eEEEEeceeccccccccccc----cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccC
Confidence 99999999988543211000 00011122 1222 45679999999999999998765434 454 44 46899
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
+.|+++.+.+.++.
T Consensus 224 ~~e~~~~~~~~~g~ 237 (308)
T 1qyc_A 224 LNELVALWEKKIDK 237 (308)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999864
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=8.7e-12 Score=95.78 Aligned_cols=139 Identities=14% Similarity=0.193 Sum_probs=91.1
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++++++++|++. + +++||+ |+ ||... ... +.+..+. .+.| .+|..+|+.+++ .+++
T Consensus 95 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~~~----~~~---~~~~~p~-----~~~y-~sK~~~e~~~~~----~g~~ 151 (313)
T 1qyd_A 95 EQLKLVEAIKEA-GNIKRFLP-SE----FGMDP----DIM---EHALQPG-----SITF-IDKRKVRRAIEA----ASIP 151 (313)
T ss_dssp THHHHHHHHHHS-CCCSEEEC-SC----CSSCT----TSC---CCCCSST-----THHH-HHHHHHHHHHHH----TTCC
T ss_pred HHHHHHHHHHhc-CCCceEEe-cC----CcCCc----ccc---ccCCCCC-----cchH-HHHHHHHHHHHh----cCCC
Confidence 689999999998 6 999995 33 44321 111 1111111 1348 999999998853 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eE-EEe-cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~s 152 (216)
++++||+.++|.......... . .....+. ..++ ..++|+|++|+|+++..++..+...+ .| +++ ++.+|
T Consensus 152 ~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s 228 (313)
T 1qyd_A 152 YTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILS 228 (313)
T ss_dssp BCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEE
T ss_pred eEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccC
Confidence 999999999885432110000 0 0011222 2333 44679999999999999998765434 45 444 46899
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
+.|+++.+.+.++.
T Consensus 229 ~~e~~~~~~~~~g~ 242 (313)
T 1qyd_A 229 QKEVIQIWERLSEQ 242 (313)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999864
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=5.9e-12 Score=97.05 Aligned_cols=134 Identities=13% Similarity=0.113 Sum_probs=89.9
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++++++++|++. + +++||+ |+ ||... +|+.+..+. .+.| .+|..+|+.+++ .+++
T Consensus 94 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~~~--------~~~~~~~p~-----~~~y-~sK~~~e~~~~~----~~~~ 149 (318)
T 2r6j_A 94 DQFKILEAIKVA-GNIKRFLP-SD----FGVEE--------DRINALPPF-----EALI-ERKRMIRRAIEE----ANIP 149 (318)
T ss_dssp THHHHHHHHHHH-CCCCEEEC-SC----CSSCT--------TTCCCCHHH-----HHHH-HHHHHHHHHHHH----TTCC
T ss_pred HHHHHHHHHHhc-CCCCEEEe-ec----cccCc--------ccccCCCCc-----chhH-HHHHHHHHHHHh----cCCC
Confidence 689999999998 6 999985 33 43211 222222221 1348 999999988854 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eE-EEe-cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~s 152 (216)
++++||+.+++.. ...++.....+. ..++ ...+|+|++|+|+++..++..+...+ .+ +++ ++.+|
T Consensus 150 ~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s 222 (318)
T 2r6j_A 150 YTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIIT 222 (318)
T ss_dssp BEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEE
T ss_pred eEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccC
Confidence 9999998887631 112221112222 1222 35679999999999999998765434 44 444 57899
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
+.|+++.+.+.++.
T Consensus 223 ~~e~~~~~~~~~g~ 236 (318)
T 2r6j_A 223 QLELISRWEKKIGK 236 (318)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999998864
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=95.71 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=90.1
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++++++++|.+. + +++||+ |+ ||.. .+|+.+..+. .+.| .+|..+|++++. .+++
T Consensus 92 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~~--------~~~~~~~~p~-----~~~y-~sK~~~e~~~~~----~~~~ 147 (321)
T 3c1o_A 92 SQIHIINAIKAA-GNIKRFLP-SD----FGCE--------EDRIKPLPPF-----ESVL-EKKRIIRRAIEA----AALP 147 (321)
T ss_dssp GGHHHHHHHHHH-CCCCEEEC-SC----CSSC--------GGGCCCCHHH-----HHHH-HHHHHHHHHHHH----HTCC
T ss_pred hHHHHHHHHHHh-CCccEEec-cc----cccC--------ccccccCCCc-----chHH-HHHHHHHHHHHH----cCCC
Confidence 678999999998 6 999983 32 4321 1232222221 2359 999999998854 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHH---HHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eEEE-e-cC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILN---LINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLL-A-GS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~---~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~-~~ 149 (216)
++++||+.++|... ..+... ...+. ..++ ...+|+|++|+|+++..++..+...+ .|++ + ++
T Consensus 148 ~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~ 220 (321)
T 3c1o_A 148 YTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKN 220 (321)
T ss_dssp BEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGG
T ss_pred eEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCC
Confidence 99999999887421 111110 01122 2222 34679999999999999998765444 4544 4 47
Q ss_pred CCCHHHHHHHHHHhCCC
Q 027969 150 VAQHSDILKFLREHYPT 166 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~ 166 (216)
.+|+.|+++.+.+.++.
T Consensus 221 ~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 221 IISQNELISLWEAKSGL 237 (321)
T ss_dssp EEEHHHHHHHHHHHHTS
T ss_pred cccHHHHHHHHHHHcCC
Confidence 89999999999998864
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.4e-12 Score=95.33 Aligned_cols=137 Identities=12% Similarity=0.155 Sum_probs=90.2
Q ss_pred cHHHHHHHHhccCC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
++.+++++|++. + +++||+ |+ ||... +|+.+..+. .+.| .+|..+|+.++. .+++
T Consensus 91 ~~~~l~~aa~~~-g~v~~~v~-S~----~g~~~--------~~~~~~~p~-----~~~y-~sK~~~e~~~~~----~~i~ 146 (307)
T 2gas_A 91 DQVKIIKAIKEA-GNVKKFFP-SE----FGLDV--------DRHDAVEPV-----RQVF-EEKASIRRVIEA----EGVP 146 (307)
T ss_dssp GHHHHHHHHHHH-CCCSEEEC-SC----CSSCT--------TSCCCCTTH-----HHHH-HHHHHHHHHHHH----HTCC
T ss_pred cHHHHHHHHHhc-CCceEEee-cc----cccCc--------ccccCCCcc-----hhHH-HHHHHHHHHHHH----cCCC
Confidence 678999999998 6 999983 33 43221 222222221 1349 999999998854 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-eE-EEe-cCCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQ 152 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~s 152 (216)
++++||+.++|......... ......+. ..++ ...+|+|++|+|+++..++..+...+ .+ +.+ ++.+|
T Consensus 147 ~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s 222 (307)
T 2gas_A 147 YTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLT 222 (307)
T ss_dssp BEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEE
T ss_pred eEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCC
Confidence 99999999988543210000 00011122 1222 34679999999999999998765434 44 444 46899
Q ss_pred HHHHHHHHHHhCCC
Q 027969 153 HSDILKFLREHYPT 166 (216)
Q Consensus 153 ~~el~~~i~~~~~~ 166 (216)
+.|+++.+.+.++.
T Consensus 223 ~~e~~~~~~~~~g~ 236 (307)
T 2gas_A 223 QNEVIALWEKKIGK 236 (307)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999864
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.2e-10 Score=84.44 Aligned_cols=138 Identities=18% Similarity=0.232 Sum_probs=93.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..+||++||. ..|.... . +...|+.||...|.+++.++++
T Consensus 128 ~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~~--------------~------~~~~Y~~sK~a~~~~~~~la~e~~ 186 (278)
T 2bgk_A 128 GAFLVAKHAARVMIPAKKGSIVFTASI-SSFTAGE--------------G------VSHVYTATKHAVLGLTTSLCTELG 186 (278)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEECCG-GGTCCCT--------------T------SCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeec-cccCCCC--------------C------CCcchHHHHHHHHHHHHHHHHHHh
Confidence 456677766542 155799999997 6653211 0 1134999999999999998765
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC--CCCc-eEEEe-cCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP--KASG-RYLLA-GSV 150 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~-~~~ 150 (216)
.|++++++||+.|+++...............+.... + ....+++++|+|+++..++... ...| .+++. |..
T Consensus 187 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 263 (278)
T 2bgk_A 187 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA---ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT 263 (278)
T ss_dssp GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT---CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc---cccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccc
Confidence 489999999999999875432222233333322221 1 2345899999999999998653 2234 66666 567
Q ss_pred CCHHHHHHHHHHh
Q 027969 151 AQHSDILKFLREH 163 (216)
Q Consensus 151 ~s~~el~~~i~~~ 163 (216)
+++.|+++.+.+.
T Consensus 264 ~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 264 RTNPAFPTALKHG 276 (278)
T ss_dssp GCCTHHHHHSCSC
T ss_pred ccCCccchhhhhh
Confidence 8999999988654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=88.39 Aligned_cols=139 Identities=20% Similarity=0.093 Sum_probs=88.3
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
++.++..+++. +..+||++||.++.++.. +.+.|+.||...|.+++.++.+ .|+
T Consensus 118 ~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 174 (281)
T 3m1a_A 118 TRALLPQMRER-GSGSVVNISSFGGQLSFA----------------------GFSAYSATKAALEQLSEGLADEVAPFGI 174 (281)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCGGGTCCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHhc-CCCEEEEEcCccccCCCC----------------------CchHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 55666666666 667999999983333211 1145999999999999998876 689
Q ss_pred cEEEEcCCCccCCCCCCCC----CccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCC
Q 027969 80 DLVAIHPGTVIGPFFQPIL----NFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQ 152 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s 152 (216)
++.++||+.|.++...+.. .....+........ .... ....+.+++|+|++++.+++.+..+++|+++ +....
T Consensus 175 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~ 254 (281)
T 3m1a_A 175 KVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDF 254 (281)
T ss_dssp EEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHH
T ss_pred EEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHH
Confidence 9999999999876543211 01111111111111 0001 3445888999999999999988777777666 44455
Q ss_pred HHHHHHHHHHhC
Q 027969 153 HSDILKFLREHY 164 (216)
Q Consensus 153 ~~el~~~i~~~~ 164 (216)
+.+.+..+.+.+
T Consensus 255 i~g~~~~i~~~~ 266 (281)
T 3m1a_A 255 LTGHLDSVRAEL 266 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666555543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.8e-10 Score=85.81 Aligned_cols=136 Identities=21% Similarity=0.184 Sum_probs=81.5
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCC-CCccc-------ccccchhHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF-SNPVL-------CKENKEWYSLAKTLAEEAA 70 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~-~~~~~-------~~~~~~~Y~~sK~~~E~~~ 70 (216)
|+.++++++.+. .+.++||++||. .+|+.... ..+..|+.. ..... ...+.+.|+.||...|.++
T Consensus 89 ~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (255)
T 2dkn_A 89 GVSALLDGLAEALSRGQQPAAVIVGSI-AATQPGAA---ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLA 164 (255)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEEECCG-GGGSTTGG---GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCceEEEEecc-cccccccc---ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHH
Confidence 567788876542 255799999998 66644310 111111100 00000 0012245999999999999
Q ss_pred HHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCC-CCCCceeehhhhHHHHHHhhcCC--CCCc
Q 027969 71 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSF-AFPYIFVEIRDVVYAHIRALEVP--KASG 142 (216)
Q Consensus 71 ~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 142 (216)
+.++++ .+++++++||+.|+|+.... .+.....+. ..+ +....++|++|+|++++.++..+ ...|
T Consensus 165 ~~~~~~~~~~gi~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 237 (255)
T 2dkn_A 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQA-------SKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHG 237 (255)
T ss_dssp HHTHHHHHHTTCEEEEEEECCBCSHHHHH-------HHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHhhcCcEEEEEcCCcccchhhhh-------cccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCccccee
Confidence 988765 58999999999999875311 100000000 001 01236899999999999999765 2334
Q ss_pred -eEEEec
Q 027969 143 -RYLLAG 148 (216)
Q Consensus 143 -~~~~~~ 148 (216)
.|++.+
T Consensus 238 ~~~~v~g 244 (255)
T 2dkn_A 238 SVLFVDG 244 (255)
T ss_dssp CEEEEST
T ss_pred eEEEecC
Confidence 677764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.6e-10 Score=79.56 Aligned_cols=101 Identities=18% Similarity=0.119 Sum_probs=75.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~ 78 (216)
|+.++++++.+. +..+||++||. ..|.... +...|+.||...|.+++.++++ .|
T Consensus 100 ~~~~l~~~~~~~-~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~g 156 (207)
T 2yut_A 100 TAAFVLKHARFQ-KGARAVFFGAY-PRYVQVP---------------------GFAAYAAAKGALEAYLEAARKELLREG 156 (207)
T ss_dssp HHHHHHHHCCEE-EEEEEEEECCC-HHHHSST---------------------TBHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhc-CCcEEEEEcCh-hhccCCC---------------------CcchHHHHHHHHHHHHHHHHHHHhhhC
Confidence 677899999766 67899999997 6553211 1145999999999999998776 58
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
++++++||+.++++.... .+. ....+++++|+|++++.+++.+..+.
T Consensus 157 i~v~~v~pg~v~t~~~~~-------------~~~----~~~~~~~~~dva~~~~~~~~~~~~~~ 203 (207)
T 2yut_A 157 VHLVLVRLPAVATGLWAP-------------LGG----PPKGALSPEEAARKVLEGLFREPVPA 203 (207)
T ss_dssp CEEEEECCCCBCSGGGGG-------------GTS----CCTTCBCHHHHHHHHHHHHC--CCCS
T ss_pred CEEEEEecCcccCCCccc-------------cCC----CCCCCCCHHHHHHHHHHHHhCCCCcc
Confidence 999999999999875210 111 23579999999999999998765443
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.95 E-value=7.1e-09 Score=76.41 Aligned_cols=118 Identities=11% Similarity=0.085 Sum_probs=69.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
+++++++++++. ++++||++||. .+|+.... ...+.++..... +...|..+|+.+ +..++++
T Consensus 104 ~~~~~~~~~~~~-~~~~iV~iSS~-~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~~~~l----~~~gi~~ 165 (236)
T 3qvo_A 104 QANSVIAAMKAC-DVKRLIFVLSL-GIYDEVPG--KFVEWNNAVIGE----------PLKPFRRAADAI----EASGLEY 165 (236)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCC-CC------------------CG----------GGHHHHHHHHHH----HTSCSEE
T ss_pred HHHHHHHHHHHc-CCCEEEEEecc-eecCCCCc--ccccchhhcccc----------hHHHHHHHHHHH----HHCCCCE
Confidence 467899999998 88999999998 88875430 011222322111 223334445544 3459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCceEEEec
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASGRYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~ 148 (216)
+++||+.++++..... . ....+ .+....+++.+|+|++++.++..+. .++.|++++
T Consensus 166 ~~vrPg~i~~~~~~~~---~-----~~~~~---~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~ 223 (236)
T 3qvo_A 166 TILRPAWLTDEDIIDY---E-----LTSRN---EPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ 223 (236)
T ss_dssp EEEEECEEECCSCCCC---E-----EECTT---SCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred EEEeCCcccCCCCcce---E-----EeccC---CCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence 9999999998753210 0 00000 0122358999999999999998765 344676653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.5e-09 Score=77.37 Aligned_cols=123 Identities=16% Similarity=0.173 Sum_probs=82.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... +.+.|+.||...|.+++.++++.
T Consensus 121 ~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~~~ 177 (255)
T 1fmc_A 121 SFFHLSQLVAPEMEKN-GGGVILTITSM-AAENKNI---------------------NMTSYASSKAAASHLVRNMAFDL 177 (255)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTCCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcch-hhcCCCC---------------------CCcccHHHHHHHHHHHHHHHHHh
Confidence 5566777664 34 56799999997 5553211 11449999999999999987654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe-cCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA-GSV 150 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~ 150 (216)
++++.++||+.++++..... ....+......+. ....+++++|+|+++..++.... ..| .|++. |..
T Consensus 178 ~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (255)
T 1fmc_A 178 GEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHT----PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp HTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTC----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred hhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcC----CcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCcee
Confidence 89999999999998754321 1233444444442 12347899999999999996532 234 67776 445
Q ss_pred CCH
Q 027969 151 AQH 153 (216)
Q Consensus 151 ~s~ 153 (216)
.|+
T Consensus 252 ~s~ 254 (255)
T 1fmc_A 252 QEL 254 (255)
T ss_dssp CCC
T ss_pred ccC
Confidence 553
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=80.04 Aligned_cols=137 Identities=15% Similarity=0.007 Sum_probs=84.7
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. ..+..+||++||. ..+.... +...|+.||...|.+++.++++
T Consensus 138 ~~~~l~~~~~~~~~~~~~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~~~ 195 (302)
T 1w6u_A 138 GTAFVTLEIGKQLIKAQKGAAFLSITTI-YAETGSG---------------------FVVPSASAKAGVEAMSKSLAAEW 195 (302)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCT-HHHHCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEccc-ccccCCC---------------------CcchhHHHHHHHHHHHHHHHHHh
Confidence 45566665543 2244789999997 4442110 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe-cCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA-GSV 150 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~ 150 (216)
.|+++.++||+.|+++...............+..+. + ...+.+++|+|+++..++.... ..| .+++. |..
T Consensus 196 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---p-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 271 (302)
T 1w6u_A 196 GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI---P-CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE 271 (302)
T ss_dssp GGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC---T-TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred hhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC---C-cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCee
Confidence 689999999999998743221101111112222221 1 2247899999999999986532 234 66666 445
Q ss_pred CCHHHHHHHHHHhC
Q 027969 151 AQHSDILKFLREHY 164 (216)
Q Consensus 151 ~s~~el~~~i~~~~ 164 (216)
+++.++++.+.+..
T Consensus 272 ~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 272 VLISGEFNDLRKVT 285 (302)
T ss_dssp HHHHSTTGGGGGCC
T ss_pred eccCCccccchhhc
Confidence 67777776666544
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.86 E-value=1e-08 Score=75.82 Aligned_cols=120 Identities=21% Similarity=0.168 Sum_probs=80.0
Q ss_pred cHHHHHHHHhcc---CC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV---HS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.+. .+ ..+||++||. ..+.... +...|+.||...|.+++.++++
T Consensus 110 g~~~l~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~a~~~ 167 (244)
T 1cyd_A 110 SVFQVSQMVARDMINRGVPGSIVNVSSM-VAHVTFP---------------------NLITYSSTKGAMTMLTKAMAMEL 167 (244)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEcch-hhcCCCC---------------------CcchhHHHHHHHHHHHHHHHHHh
Confidence 456667666542 13 5789999997 5553211 1134999999999999998776
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
.++++.++||+.++++...... ....++..+..+. ....++|++|+|+++..++..+. ..| .+.+.+
T Consensus 168 ~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 239 (244)
T 1cyd_A 168 GPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH----PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDA 239 (244)
T ss_dssp GGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred hhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcC----CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence 4899999999999997532111 1223334443332 23579999999999999997542 234 455554
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=6.9e-09 Score=75.61 Aligned_cols=110 Identities=12% Similarity=0.027 Sum_probs=73.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEE
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 82 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 82 (216)
++++++++++. ++++||++||. .+|+... ....+.. . ....+.|+.+|...|.+++. .+++++
T Consensus 88 ~~~~~~~~~~~-~~~~iv~iSs~-~~~~~~~-----~~~~~~~--~----~~~~~~y~~~K~~~e~~~~~----~~i~~~ 150 (221)
T 3r6d_A 88 MASIVKALSRX-NIRRVIGVSMA-GLSGEFP-----VALEKWT--F----DNLPISYVQGERQARNVLRE----SNLNYT 150 (221)
T ss_dssp HHHHHHHHHHT-TCCEEEEEEET-TTTSCSC-----HHHHHHH--H----HTSCHHHHHHHHHHHHHHHH----SCSEEE
T ss_pred HHHHHHHHHhc-CCCeEEEEeec-eecCCCC-----ccccccc--c----cccccHHHHHHHHHHHHHHh----CCCCEE
Confidence 57899999988 88899999998 7775432 1111100 0 00112599999999998853 599999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh--cCCC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL--EVPK 139 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~--~~~~ 139 (216)
++||+.++++....... ......+....+++.+|+|++++.++ ..+.
T Consensus 151 ~vrpg~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 151 ILRLTWLYNDPEXTDYE----------LIPEGAQFNDAQVSREAVVKAIFDILHAADET 199 (221)
T ss_dssp EEEECEEECCTTCCCCE----------EECTTSCCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred EEechhhcCCCCCccee----------eccCCccCCCceeeHHHHHHHHHHHHHhcChh
Confidence 99999999873221110 00000011223899999999999999 6654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.1e-08 Score=74.13 Aligned_cols=118 Identities=20% Similarity=0.167 Sum_probs=78.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++.+++.+++. +..+||++||.++.++.. +...|+.||...|.+.+.++++. ++
T Consensus 119 ~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 175 (245)
T 2ph3_A 119 TREAVKLMMKA-RFGRIVNITSVVGILGNP----------------------GQANYVASKAGLIGFTRAVAKEYAQRGI 175 (245)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCTHHHHCCS----------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHhc-CCCEEEEEeChhhccCCC----------------------CCcchHHHHHHHHHHHHHHHHHHHHcCe
Confidence 44555556555 668999999984455321 01349999999999998887654 89
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGSV 150 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~ 150 (216)
+++++||+.++++.... ............. ....+++++|+|+++..++..+. ..| .+++.++.
T Consensus 176 ~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 176 TVNAVAPGFIETEMTER---LPQEVKEAYLKQI----PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp EEEEEEECSBCCHHHHT---SCHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred EEEEEEEEeecCcchhh---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 99999999998875332 1122222232221 12357899999999999987532 234 56666554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=4.7e-08 Score=73.75 Aligned_cols=135 Identities=16% Similarity=0.156 Sum_probs=76.5
Q ss_pred cHHHHHHHHhcc---CCccEEEEccccccc-ccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~v-y~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++... .+ .++|++||. .. +.... ....|+.||...|.+.+.++.+
T Consensus 124 g~~~l~~~~~~~~~~~~-g~iv~isS~-~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 180 (278)
T 1spx_A 124 SVIALTKKAVPHLSSTK-GEIVNISSI-ASGLHATP---------------------DFPYYSIAKAAIDQYTRNTAIDL 180 (278)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEECCT-TSSSSCCT---------------------TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcC-CeEEEEecc-cccccCCC---------------------CccHHHHHHHHHHHHHHHHHHHH
Confidence 455666665542 14 689999997 43 32110 1134999999999999888764
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCC---cc---HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC---CCc-eE
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILN---FG---AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---ASG-RY 144 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~ 144 (216)
.|+++.++||+.|.++....... .. ......+... .+ ...+.+.+|+|+++..++..+. ..| .+
T Consensus 181 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~ 256 (278)
T 1spx_A 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC---VP-AGVMGQPQDIAEVIAFLADRKTSSYIIGHQL 256 (278)
T ss_dssp GGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH---CT-TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEE
T ss_pred HhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc---CC-CcCCCCHHHHHHHHHHHcCccccCcccCcEE
Confidence 48999999999999875332100 00 0001222111 12 2247899999999999987532 335 56
Q ss_pred EEe-cCCCCHHHHHHHHHHh
Q 027969 145 LLA-GSVAQHSDILKFLREH 163 (216)
Q Consensus 145 ~~~-~~~~s~~el~~~i~~~ 163 (216)
++. |..+++.++++.+.+.
T Consensus 257 ~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 257 VVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp EESTTGGGC-----------
T ss_pred EECCCcccccCcccccHHHH
Confidence 666 5578999999988764
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.3e-08 Score=70.93 Aligned_cols=107 Identities=17% Similarity=0.098 Sum_probs=74.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--C
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--G 78 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~ 78 (216)
|+.++++++.+. .+-.+||++||. ..+.... +...|+.+|...|.+++.++++. +
T Consensus 92 ~~~~l~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~~~~~~~~~~~~e~~~g 149 (202)
T 3d7l_A 92 GQINLVLLGIDSLNDKGSFTLTTGI-MMEDPIV---------------------QGASAAMANGAVTAFAKSAAIEMPRG 149 (202)
T ss_dssp HHHHHHHTTGGGEEEEEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred HHHHHHHHHHHHhccCCEEEEEcch-hhcCCCC---------------------ccHHHHHHHHHHHHHHHHHHHHccCC
Confidence 567888888764 112689999997 4442110 11349999999999999987653 8
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEE
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLL 146 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 146 (216)
+++.++||+.++++... ...+. ....+++++|+|++++.++.....+..|++
T Consensus 150 i~v~~v~pg~v~~~~~~------------~~~~~----~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 150 IRINTVSPNVLEESWDK------------LEPFF----EGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp CEEEEEEECCBGGGHHH------------HGGGS----TTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred eEEEEEecCccCCchhh------------hhhhc----cccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 99999999999986421 11111 245689999999999998865443445654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.6e-08 Score=71.75 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=80.3
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.+ . +..+||++||. ..+.... .. +...|+.||...|.+++.++++
T Consensus 125 ~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~~~~~~-------------~~------~~~~Y~~sK~a~~~~~~~l~~e~ 183 (260)
T 3awd_A 125 GMFRSCQAVGRIMLEQ-KQGVIVAIGSM-SGLIVNR-------------PQ------QQAAYNASKAGVHQYIRSLAAEW 183 (260)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSCCS-------------SS------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CCCEEEEEecc-hhcccCC-------------CC------CccccHHHHHHHHHHHHHHHHHh
Confidence 56667776653 3 45789999997 4332110 01 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGSV 150 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~~ 150 (216)
.++++.++||+.|+++...... ....+...+..+. ....+++.+|+|+++..++... ...| .+++.++.
T Consensus 184 ~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 184 APHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGT----PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp GGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTC----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred hhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcC----CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 6899999999999998643110 1123333333332 1234889999999999998653 2234 56776553
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.76 E-value=9e-08 Score=70.94 Aligned_cols=117 Identities=19% Similarity=0.119 Sum_probs=75.6
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+.+. +..+||++||. ..+.... +...|+.||...|.+++.++++. ++++
T Consensus 124 ~~~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v 180 (250)
T 2cfc_A 124 AVLPHMLLQ-GAGVIVNIASV-ASLVAFP---------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180 (250)
T ss_dssp HHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHHHHHhC-CCCEEEEECCh-hhccCCC---------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 344444445 56799999998 4432110 11349999999999999987654 8999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.++||+.|+++...... ....+...+..+. ....+.+.+|+|+++..++..+. ..| .+++.++
T Consensus 181 ~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 246 (250)
T 2cfc_A 181 NAVCPGMIETPMTQWRL-DQPELRDQVLARI----PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA 246 (250)
T ss_dssp EEEEECSBCSTTTHHHH-TSHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred EEEEeCcCccCcccccc-CCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence 99999999998643200 1122333333321 12347899999999999997542 234 5556543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.74 E-value=5.3e-08 Score=71.78 Aligned_cols=120 Identities=26% Similarity=0.296 Sum_probs=79.0
Q ss_pred cHHHHHHHHhcc-C--C------ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-H--S------IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 72 (216)
Q Consensus 2 gt~~ll~~~~~~-~--~------~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 72 (216)
|+.++++++.+. . + ..+||++||. ..+.... +...|+.||...|.+++.
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~ 161 (242)
T 1uay_A 104 GTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV-AAFEGQI---------------------GQAAYAASKGGVVALTLP 161 (242)
T ss_dssp HHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT-HHHHCCT---------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh-hhccCCC---------------------CCchhhHHHHHHHHHHHH
Confidence 566777777542 0 1 2389999998 5553211 113499999999999988
Q ss_pred HHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 73 FAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 73 ~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
++.+. |+++.++||+.|+++.... ....+...+.... +....+++++|+|++++.++......| .+++.+
T Consensus 162 l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 235 (242)
T 1uay_A 162 AARELAGWGIRVVTVAPGLFDTPLLQG---LPEKAKASLAAQV---PFPPRLGRPEEYAALVLHILENPMLNGEVVRLDG 235 (242)
T ss_dssp HHHHHGGGTEEEEEEEECSCSSHHHHT---SCHHHHHHHHTTC---CSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHhhcCcEEEEEEeccCcchhhhc---cchhHHHHHHhhC---CCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence 77653 8999999999999876432 1222233333321 111347899999999999998754455 566654
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 236 G 236 (242)
T 1uay_A 236 A 236 (242)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.70 E-value=6.7e-08 Score=72.37 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=65.7
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||. ..+.... +...|+.||...|.+++.++++.
T Consensus 126 g~~~l~~~~~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 182 (266)
T 1xq1_A 126 SAYHLSQLAHPLLKAS-GCGNIIFMSSI-AGVVSAS---------------------VGSIYSATKGALNQLARNLACEW 182 (266)
T ss_dssp HHHHHHHHHHHHHHHH-SSCEEEEEC--------------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEccc-hhccCCC---------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence 566777777 344 56799999997 4442110 01349999999999999887663
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++++.++||+.++++...... ...+....... .+ ...+++.+|+|+++..++... ...| .+++.++
T Consensus 183 ~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 254 (266)
T 1xq1_A 183 ASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISR---KP-LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254 (266)
T ss_dssp GGGTCEEEEEECCSCC-------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred hHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence 899999999999998643211 00111111111 11 124789999999999998643 2234 5555543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.1e-07 Score=70.29 Aligned_cols=121 Identities=21% Similarity=0.141 Sum_probs=77.4
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.+ .+...+||++||. ..+.... +...|+.||...|.+++.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 167 (244)
T 3d3w_A 110 AVIQVSQIVARGLIARGVPGAIVNVSSQ-CSQRAVT---------------------NHSVYCSTKGALDMLTKVMALEL 167 (244)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEeCch-hhccCCC---------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 45556665544 3215789999997 5442210 1145999999999999998765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.++++.++||+.|+++...... ........+..+. ....+++++|+|++++.++... ...| .|++.++
T Consensus 168 ~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 3d3w_A 168 GPHKIRVNAVNPTVVMTSMGQATW-SDPHKAKTMLNRI----PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp GGGTEEEEEEEECCBTTTTHHHHS-CSTTHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cccCeEEEEEEeccccccchhhhc-cChHHHHHHHhhC----CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 4899999999999987532110 0011122222221 2336889999999999999753 2234 5666543
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=7.3e-08 Score=71.72 Aligned_cols=87 Identities=18% Similarity=0.159 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
..|+.||...|.+++.++++. ++++.++||+.++++.... ....+...+..+. ....+++++|+|+++..
T Consensus 162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~ 234 (258)
T 3afn_B 162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD---KTQDVRDRISNGI----PMGRFGTAEEMAPAFLF 234 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT---CCHHHHHHHHTTC----TTCSCBCGGGTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc---cCHHHHHHHhccC----CCCcCCCHHHHHHHHHH
Confidence 449999999999999887654 8999999999999986542 1233344444332 22358999999999999
Q ss_pred hhcCC---CCCc-eEEEecCC
Q 027969 134 ALEVP---KASG-RYLLAGSV 150 (216)
Q Consensus 134 ~~~~~---~~~~-~~~~~~~~ 150 (216)
++... ...| .|++.++.
T Consensus 235 l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 235 FASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp HHCHHHHTTCCSEEEEESTTS
T ss_pred HhCcchhccccCCEEeECCCc
Confidence 98753 2234 67776554
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.8e-07 Score=68.23 Aligned_cols=118 Identities=16% Similarity=0.169 Sum_probs=80.8
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ .+. +..+||++||.++.++... ...|+.||...+.+.+.++.+
T Consensus 116 g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~ 172 (246)
T 3osu_A 116 GVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGNPG----------------------QANYVATKAGVIGLTKSAAREL 172 (246)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHh
Confidence 566777777 444 4568999999845443211 134999999999999988773
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++.... ........+..+. ....+.+.+|+|+++..++..... .| .+++.|+
T Consensus 173 ~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~----p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 173 ASRGITVNAVAPGFIVSDMTDA---LSDELKEQMLTQI----PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp GGGTEEEEEEEECSBGGGCCSC---SCHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cccCeEEEEEEECCCcCCcccc---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 48999999999999876542 2334444444432 223467899999999999875432 34 5666644
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-07 Score=70.89 Aligned_cols=121 Identities=24% Similarity=0.227 Sum_probs=78.2
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccc-cCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAML-LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++.+. .+ .+||++||. ..+ .... ....|+.||...|.+++.++++.
T Consensus 133 ~~~~l~~~~~~~~~~~-~~iv~~sS~-~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~~~e~~ 189 (274)
T 1ja9_A 133 GQFFVAQQGLKHCRRG-GRIILTSSI-AAVMTGIP---------------------NHALYAGSKAAVEGFCRAFAVDCG 189 (274)
T ss_dssp HHHHHHHHHHHHEEEE-EEEEEECCG-GGTCCSCC---------------------SCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhhC-CEEEEEcCh-HhccCCCC---------------------CCchHHHHHHHHHHHHHHHHHHhh
Confidence 567777777653 13 689999997 444 2211 11349999999999999987764
Q ss_pred --CCcEEEEcCCCccCCCCCCC---C------Ccc-HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-
Q 027969 78 --GIDLVAIHPGTVIGPFFQPI---L------NFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG- 142 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~---~------~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~- 142 (216)
++++.++||+.++++..... . ... .........+. ....+++++|+|+++..++..+.. .|
T Consensus 190 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~i~~l~~~~~~~~~G~ 265 (274)
T 1ja9_A 190 AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----PLKRIGYPADIGRAVSALCQEESEWINGQ 265 (274)
T ss_dssp GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred hcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC----CCCCccCHHHHHHHHHHHhCcccccccCc
Confidence 89999999999987642200 0 011 12222222221 234589999999999999975322 34
Q ss_pred eEEEecC
Q 027969 143 RYLLAGS 149 (216)
Q Consensus 143 ~~~~~~~ 149 (216)
.|++.++
T Consensus 266 ~~~v~gG 272 (274)
T 1ja9_A 266 VIKLTGG 272 (274)
T ss_dssp EEEESTT
T ss_pred EEEecCC
Confidence 6777654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=2.8e-07 Score=68.17 Aligned_cols=114 Identities=19% Similarity=0.079 Sum_probs=74.4
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ 82 (216)
+++.+.+. +..+||++||.++.++... ...|+.||...|.+.+.++++ .++++.
T Consensus 127 ~~~~~~~~-~~~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 183 (248)
T 2pnf_A 127 SLRKMIKQ-RWGRIVNISSVVGFTGNVG----------------------QVNYSTTKAGLIGFTKSLAKELAPRNVLVN 183 (248)
T ss_dssp HCHHHHHH-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHHHHHhc-CCcEEEEEccHHhcCCCCC----------------------CchHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 33344444 5679999999744553211 134999999999999888764 389999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++||+.++++.... ............. ....+++++|+|+++..++... ...| .|++.++
T Consensus 184 ~v~Pg~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 184 AVAPGFIETDMTAV---LSEEIKQKYKEQI----PLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp EEEECSBCCGGGGG---SCHHHHHHHHHTC----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEeceecCchhhh---ccHHHHHHHHhcC----CCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 99999999876432 1122222222221 1234889999999999998653 2234 6666644
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-07 Score=69.92 Aligned_cols=119 Identities=19% Similarity=0.177 Sum_probs=75.3
Q ss_pred cHHHHHHHHhcc---CC-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV---HS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.+. .+ ..+||++||.++.++.. +...|+.||...|.+++.++++
T Consensus 126 g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 183 (264)
T 2pd6_A 126 GTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV----------------------GQTNYAASKAGVIGLTQTAAREL 183 (264)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC----------------------CChhhHHHHHHHHHHHHHHHHHh
Confidence 566777776553 12 46899999984444321 1134999999999999988776
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.++++.++||+.++++..... ...+...+..+ .+ ...+++++|+|+++..++... ...| .+.+.++
T Consensus 184 ~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 254 (264)
T 2pd6_A 184 GRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEM---IP-MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254 (264)
T ss_dssp GGGTEEEEEEEECSBCSCC-------------CTGGG---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCeEEEEEeeecccccchhhc---CHHHHHHHHHh---CC-CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 589999999999999864321 11111111111 11 234789999999999998653 2334 5566544
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=70.73 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=74.9
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ 82 (216)
++..+++. +..+||++||. ..+.... .. +.+.|+.||...|.+++.++++. +++++
T Consensus 127 ~~~~~~~~-~~~~iv~isS~-~~~~~~~-------------~~------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~ 185 (254)
T 2wsb_A 127 FGRAMVAR-GAGAIVNLGSM-SGTIVNR-------------PQ------FASSYMASKGAVHQLTRALAAEWAGRGVRVN 185 (254)
T ss_dssp HHHHHHHH-TCEEEEEECCG-GGTSCCS-------------SS------CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHHHHHhc-CCcEEEEEecc-hhccCCC-------------CC------cchHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 33444445 56899999997 4442211 01 11459999999999999887664 89999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++||+.++++...... ........+.... ....+++++|+|+++..++... ...| .+++.|+
T Consensus 186 ~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 186 ALAPGYVATEMTLKMR-ERPELFETWLDMT----PMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp EEEECCBCSHHHHHHH-TCHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEecccCchhhhccc-cChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 9999999987532100 0112233333321 1235889999999999998653 2334 5566554
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.62 E-value=2.8e-07 Score=67.96 Aligned_cols=119 Identities=15% Similarity=0.182 Sum_probs=77.1
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++.+. .+..+||++||.++.++... ...|+.||...+.+.+.++++
T Consensus 113 ~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~ 170 (244)
T 1edo_A 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG----------------------QANYAAAKAGVIGFSKTAAREGA 170 (244)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC----------------------CccchhhHHHHHHHHHHHHHHhh
Confidence 556667766542 15579999999845443211 134999999999998888765
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC---CCc-eEEEecC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---ASG-RYLLAGS 149 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~~ 149 (216)
.++++.++||+.++++.... ............ .+ ...+++.+|+|+++..++..+. ..| .+++.++
T Consensus 171 ~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 171 SRNINVNVVCPGFIASDMTAK---LGEDMEKKILGT---IP-LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp TTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTS---CT-TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred hcCCEEEEEeeCccccchhhh---cChHHHHHHhhc---CC-CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 38999999999998865322 112222222222 12 2347899999999999984332 234 5666543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.61 E-value=3e-07 Score=67.99 Aligned_cols=118 Identities=17% Similarity=0.098 Sum_probs=72.8
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.+++++... ...|+.||...|.+++.++++.
T Consensus 117 ~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~ 173 (247)
T 2hq1_A 117 SAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIGNAG----------------------QANYAASKAGLIGFTKSIAKEF 173 (247)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECC-------------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC----------------------CcHhHHHHHHHHHHHHHHHHHH
Confidence 4455555554 34 5679999999755664321 1349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++++.+++|+.+.++.... ...........+. ....+++++|+|+++..++..+. ..| .|++.++
T Consensus 174 ~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 244 (247)
T 2hq1_A 174 AAKGIYCNAVAPGIIKTDMTDV---LPDKVKEMYLNNI----PLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244 (247)
T ss_dssp GGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHcCcEEEEEEEEEEeccchhh---cchHHHHHHHhhC----CCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence 8999999999997753221 1122222232221 12358899999999999886532 234 6777654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.58 E-value=5.7e-08 Score=73.44 Aligned_cols=139 Identities=20% Similarity=0.128 Sum_probs=88.3
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++... .+-.+||++||. ..+.... ....|+.||...|.+.+.++.+.
T Consensus 126 g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~l~~~la~e~~ 183 (281)
T 3svt_A 126 GTMYVLKHAAREMVRGGGGSFVGISSI-AASNTHR---------------------WFGAYGVTKSAVDHLMQLAADELG 183 (281)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECCH-HHHSCCT---------------------TCTHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeCH-HHcCCCC---------------------CChhHHHHHHHHHHHHHHHHHHhh
Confidence 556667766543 133489999998 4442211 01349999999999999988754
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe-cCCC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA-GSVA 151 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~~ 151 (216)
++++.+++|+.|.++...... ............. ....+.+++|+|+++..++.... ..| .+++. |..+
T Consensus 184 ~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~----p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~ 258 (281)
T 3svt_A 184 ASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCT----PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQML 258 (281)
T ss_dssp GGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHC----SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhc
Confidence 699999999999886532100 0112222222221 12346789999999999987532 234 66776 4444
Q ss_pred C-HHHHHHHHHHhCCCC
Q 027969 152 Q-HSDILKFLREHYPTL 167 (216)
Q Consensus 152 s-~~el~~~i~~~~~~~ 167 (216)
+ ..++++.+.+.++..
T Consensus 259 ~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 259 RRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp SCCCCCHHHHHHHHCTT
T ss_pred ccCCcchhccccccCCc
Confidence 4 667777777776543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.6e-07 Score=66.50 Aligned_cols=117 Identities=20% Similarity=0.146 Sum_probs=78.7
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ .+. +..++|++||. ..+.... .. +...|+.||...+.+.+.++.+.
T Consensus 130 g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~-------------~~------~~~~Y~~sKaa~~~l~~~la~e~ 188 (260)
T 3un1_A 130 GFFHITQRAAAEMLKQ-GSGHIVSITTS-LVDQPMV-------------GM------PSALASLTKGGLNAVTRSLAMEF 188 (260)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCT-TTTSCBT-------------TC------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEEech-hhccCCC-------------CC------ccHHHHHHHHHHHHHHHHHHHHh
Confidence 566677766 344 56789999997 5442211 00 11349999999999999998876
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++..... ......... ....+.+++|+|+++..+.+.....| .+++.|+
T Consensus 189 ~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~~----p~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG 254 (260)
T 3un1_A 189 SRSGVRVNAVSPGVIKTPMHPAE------THSTLAGLH----PVGRMGEIRDVVDAVLYLEHAGFITGEILHVDGG 254 (260)
T ss_dssp TTTTEEEEEEEECCBCCTTSCGG------GHHHHHTTS----TTSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred CcCCeEEEEEeecCCCCCCCCHH------HHHHHhccC----CCCCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence 89999999999998864321 111122221 22347789999999999966555555 6666643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-07 Score=69.75 Aligned_cols=122 Identities=13% Similarity=0.154 Sum_probs=76.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||. ..+.... +...|+.||...|.+.+.++.+
T Consensus 119 ~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 175 (263)
T 3ai3_A 119 AAVRLARGLVPGMRAR-GGGAIIHNASI-CAVQPLW---------------------YEPIYNVTKAALMMFSKTLATEV 175 (263)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECch-hhcCCCC---------------------CcchHHHHHHHHHHHHHHHHHHh
Confidence 4455555553 34 56799999998 5553211 1134999999999999998775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCC--------ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-e
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-R 143 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 143 (216)
.|+++.++||+.|+++....... ........+.... .+ ...+.+++|+|+++..++..+. ..| .
T Consensus 176 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-~~~~~~~~dvA~~~~~l~s~~~~~~~G~~ 252 (263)
T 3ai3_A 176 IKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--AP-IKRFASPEELANFFVFLCSERATYSVGSA 252 (263)
T ss_dssp GGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--CT-TCSCBCHHHHHHHHHHHTSTTCTTCCSCE
T ss_pred hhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--CC-CCCCcCHHHHHHHHHHHcCccccCCCCcE
Confidence 58999999999999875321000 0111112221110 11 2358899999999999987532 234 5
Q ss_pred EEEecC
Q 027969 144 YLLAGS 149 (216)
Q Consensus 144 ~~~~~~ 149 (216)
+++.++
T Consensus 253 ~~vdgG 258 (263)
T 3ai3_A 253 YFVDGG 258 (263)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 666643
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.55 E-value=2.4e-06 Score=65.85 Aligned_cols=132 Identities=16% Similarity=0.066 Sum_probs=77.3
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..++|++||+++.++... ....|+.||...|.+.+.++.+
T Consensus 121 g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~el 178 (324)
T 3u9l_A 121 STQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPP---------------------YLAPYFAAKAAMDAIAVQYAREL 178 (324)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCCS---------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEecchhccCCCC---------------------cchhHHHHHHHHHHHHHHHHHHh
Confidence 567777777 555 5578999999833332211 0134999999999999998776
Q ss_pred --cCCcEEEEcCCCccCCCCCCC---CCccHHHHHHHHcCC-CCCC---------CCCceeehhhhHHHHHHhhcCCCCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGD-QSFA---------FPYIFVEIRDVVYAHIRALEVPKAS 141 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~---------~~~~~i~v~D~a~~~~~~~~~~~~~ 141 (216)
.|+++++++|+.|.++..... ............... ...+ ...+..+.+|+|++++.+++.+...
T Consensus 179 ~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~ 258 (324)
T 3u9l_A 179 SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGK 258 (324)
T ss_dssp HTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTC
T ss_pred hhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCC
Confidence 489999999999986543211 011112222221111 1111 1112368999999999999876432
Q ss_pred c--eEEEecCCCCHHH
Q 027969 142 G--RYLLAGSVAQHSD 155 (216)
Q Consensus 142 ~--~~~~~~~~~s~~e 155 (216)
. ++.+++.......
T Consensus 259 ~~~~~~~gp~~~~~~~ 274 (324)
T 3u9l_A 259 RPFRVHVDPAEDGADV 274 (324)
T ss_dssp CCSEEEECTTCCSHHH
T ss_pred CCeEEEeCCcchHHHH
Confidence 2 4556555555333
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.7e-07 Score=68.84 Aligned_cols=122 Identities=16% Similarity=0.090 Sum_probs=77.3
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++... +.-.++|++||.++.++... ...|+.||...|.+.+.++.+.
T Consensus 116 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~~~~~la~e~ 173 (259)
T 4e6p_A 116 GTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL----------------------VAIYCATKAAVISLTQSAGLDL 173 (259)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC----------------------ChHHHHHHHHHHHHHHHHHHHh
Confidence 556677766542 11358999999844332211 1349999999999999988654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C----CCC---CCCceeehhhhHHHHHHhhcCCC--CCc-e
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q----SFA---FPYIFVEIRDVVYAHIRALEVPK--ASG-R 143 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~----~~~---~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 143 (216)
|+++.+++|+.|+++.... ....+....... . .+. ....+.+++|+|+++..++.... ..| .
T Consensus 174 ~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~ 249 (259)
T 4e6p_A 174 IKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQT 249 (259)
T ss_dssp GGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCE
T ss_pred hhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCE
Confidence 8999999999999875321 111122211111 0 011 23458999999999999886432 234 6
Q ss_pred EEEecC
Q 027969 144 YLLAGS 149 (216)
Q Consensus 144 ~~~~~~ 149 (216)
+++.|+
T Consensus 250 i~vdgG 255 (259)
T 4e6p_A 250 YNVDGG 255 (259)
T ss_dssp EEESTT
T ss_pred EEECcC
Confidence 777643
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.55 E-value=8.1e-07 Score=66.31 Aligned_cols=126 Identities=21% Similarity=0.258 Sum_probs=78.5
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++... +...+||++||.+..++... . ..+ ..+...|+.||...|.+++.++++.
T Consensus 126 ~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------~---~~~------~~~~~~Y~~sK~a~~~~~~~la~e~ 190 (265)
T 1h5q_A 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS------S---LNG------SLTQVFYNSSKAACSNLVKGLAAEW 190 (265)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE------E---TTE------ECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc------c---ccc------cccccccHHHHHHHHHHHHHHHHHH
Confidence 456677766542 22468999999833332210 0 000 1122459999999999999987653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++++.++||+.|+++..... ............ + ...+++.+|+|+++..++.... ..| .+++.++
T Consensus 191 ~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~---~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 191 ASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI---P-LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp GGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC---T-TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred HhcCcEEEEEecCcccccccccc---chhHHHHHHhcC---c-ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence 89999999999998764321 122222222221 1 2347899999999999986532 234 5666644
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.54 E-value=5.5e-07 Score=66.70 Aligned_cols=117 Identities=14% Similarity=0.167 Sum_probs=73.9
Q ss_pred HHHHHHHhccCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH-----Hc
Q 027969 4 LNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK-----EN 77 (216)
Q Consensus 4 ~~ll~~~~~~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~ 77 (216)
+.+++.+.+. +. .+||++||. ..+.... +...|+.||...|.+++.++. ..
T Consensus 122 ~~~~~~~~~~-~~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~ 178 (251)
T 1zk4_A 122 RLGIQRMKNK-GLGASIINMSSI-EGFVGDP---------------------SLGAYNASKGAVRIMSKSAALDCALKDY 178 (251)
T ss_dssp HHHHHHHTTS-SSCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc-CCCCEEEEeCCc-hhccCCC---------------------CCccchHHHHHHHHHHHHHHHHhcccCC
Confidence 4455555555 55 799999998 4442211 113499999999999988765 34
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++++.++||+.|+++..... .......... ...+ ...+++.+|+|+++..++.... ..| .+++.++
T Consensus 179 ~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~--~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 247 (251)
T 1zk4_A 179 DVRVNTVHPGYIKTPLVDDL---PGAEEAMSQR--TKTP-MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp SEEEEEEEECCBCCHHHHTS---TTHHHHHTST--TTCT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEeeCcCcchhhhhc---CchhhhHHHh--hcCC-CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 89999999999998754321 1011111111 1112 2348899999999999986532 234 5666543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-06 Score=64.23 Aligned_cols=120 Identities=15% Similarity=0.071 Sum_probs=79.5
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ .+. +..+||++||. ..+.... +...|+.||...+.+.+.++.+
T Consensus 121 g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~ 177 (271)
T 3tzq_B 121 GTMLMCKYAIPRLISA-GGGAIVNISSA-TAHAAYD---------------------MSTAYACTKAAIETLTRYVATQY 177 (271)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCG-GGTSBCS---------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECCH-HHcCCCC---------------------CChHHHHHHHHHHHHHHHHHHHH
Confidence 556677776 445 55799999998 4442111 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGSV 150 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~~ 150 (216)
+|+++.+++|+.|.++..... ........+.... ....+.+.+|+|+++..++... ...| .+.+.|+.
T Consensus 178 ~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~----~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 178 GRHGVRCNAIAPGLVRTPRLEVG--LPQPIVDIFATHH----LAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp GGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred hhcCEEEEEEEeCCCcCcccccc--CCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence 589999999999999875422 1223333333221 1223678999999999998653 2334 56666554
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.3e-06 Score=66.17 Aligned_cols=118 Identities=18% Similarity=0.164 Sum_probs=74.5
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++.++... ...|+.||...|.+++.++++.
T Consensus 155 g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~~~~~la~e~ 211 (285)
T 2c07_A 155 SLFYITQPISKRMINN-RYGRIINISSIVGLTGNVG----------------------QANYSSSKAGVIGFTKSLAKEL 211 (285)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEECChhhccCCCC----------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 4455555554 44 5579999999844443211 1349999999999998887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.++||+.+.++.... ............ .+ ...+++++|+|++++.++.... ..| .+++.|+
T Consensus 212 ~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~---~~-~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG 282 (285)
T 2c07_A 212 ASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISN---IP-AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282 (285)
T ss_dssp GGGTEEEEEEEECSBCC--------CCHHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhCcEEEEEEeCcEecCchhh---cCHHHHHHHHhh---CC-CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence 8999999999998875432 122222222222 12 2248899999999999987532 234 5666543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.53 E-value=7.6e-07 Score=66.04 Aligned_cols=117 Identities=13% Similarity=0.058 Sum_probs=76.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
++.++..+++. +..+||++||. ..+.... +...|+.||...+.+.+.++.+ .|+
T Consensus 120 ~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 176 (249)
T 1o5i_A 120 VRNYLPAMKEK-GWGRIVAITSF-SVISPIE---------------------NLYTSNSARMALTGFLKTLSFEVAPYGI 176 (249)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHHc-CCcEEEEEcch-HhcCCCC---------------------CCchHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 34556666666 56799999998 5553211 1134999999999999888765 489
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHH-HHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVIL-NLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++.++||+.|.++..... ...... .+... .+ ...+.+.+|+|+++..++... ...| .+++.++
T Consensus 177 ~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~---~p-~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG 243 (249)
T 1o5i_A 177 TVNCVAPGWTETERVKEL---LSEEKKKQVESQ---IP-MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243 (249)
T ss_dssp EEEEEEECSBCCTTHHHH---SCHHHHHHHHTT---ST-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEEeeCCCccCccccc---chhhHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 999999999988753210 011111 22221 11 234789999999999998653 2234 5666654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.3e-06 Score=66.30 Aligned_cols=126 Identities=13% Similarity=-0.009 Sum_probs=76.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCC-CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDET-WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..++||++||.+...+... .....++ .+.. +...|+.||...+.+.+.++++.
T Consensus 118 g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~----~~~~~~~~~~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~ 186 (291)
T 3rd5_A 118 GHFALTNLLLPR-LTDRVVTVSSMAHWPGRIN----LEDLNWRSRRYS------PWLAYSQSKLANLLFTSELQRRLTAA 186 (291)
T ss_dssp HHHHHHHHHGGG-EEEEEEEECCGGGTTCCCC----SSCTTCSSSCCC------HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-HHhheeEeechhhccCCCC----cccccccccCCC------CcchHHHHHHHHHHHHHHHHHHHhhC
Confidence 678899999887 5679999999844443322 1111111 2111 22459999999999999887654
Q ss_pred C--CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 78 G--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 78 ~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
+ +++.+++||.|..+-..... ..+..... ..+...-..+.+|+|++++.++..+...|.|+
T Consensus 187 g~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~ 249 (291)
T 3rd5_A 187 GSPLRALAAHPGYSHTNLQGASG----RKLGDALM---SAATRVVATDADFGARQTLYAASQDLPGDSFV 249 (291)
T ss_dssp TCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSCCCTTCEE
T ss_pred CCCEEEEEeeCCCCccccccccc----hHHHHHHH---HHHHHHHhCCHHHHHHHHHHHHcCCCCCCcee
Confidence 4 99999999999765432210 00100000 01112223469999999999998876667553
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.2e-06 Score=63.58 Aligned_cols=118 Identities=17% Similarity=0.072 Sum_probs=76.7
Q ss_pred cHHHHHHHHhcc--CCc------cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV--HSI------KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~------~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
|+.++++++... .+. .+||++||. ..+.... ....|+.||...+.+.+.+
T Consensus 139 g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~l~~~l 196 (276)
T 1mxh_A 139 APLFLIRAFARRQGEGGAWRSRNLSVVNLCDA-MTDLPLP---------------------GFCVYTMAKHALGGLTRAA 196 (276)
T ss_dssp HHHHHHHHHHHTC-------CCCEEEEEECCG-GGGSCCT---------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcEEEEECch-hhcCCCC---------------------CCeehHHHHHHHHHHHHHH
Confidence 566777777663 133 689999998 4442110 1134999999999999988
Q ss_pred HHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe
Q 027969 74 AKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA 147 (216)
Q Consensus 74 ~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~ 147 (216)
+.+. |+++.+++|+.|.++ .. ............ .+....+.+.+|+|++++.++.... ..| .+++.
T Consensus 197 a~e~~~~gi~v~~v~PG~v~t~-~~----~~~~~~~~~~~~---~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd 268 (276)
T 1mxh_A 197 ALELAPRHIRVNAVAPGLSLLP-PA----MPQETQEEYRRK---VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVD 268 (276)
T ss_dssp HHHHGGGTEEEEEEEESSBSCC-SS----SCHHHHHHHHTT---CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHhhcCeEEEEEecCcccCC-cc----CCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 7654 899999999999998 21 122333333322 2211228899999999999986532 234 55665
Q ss_pred cC
Q 027969 148 GS 149 (216)
Q Consensus 148 ~~ 149 (216)
|+
T Consensus 269 gG 270 (276)
T 1mxh_A 269 GG 270 (276)
T ss_dssp TT
T ss_pred Cc
Confidence 44
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-06 Score=65.92 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=70.8
Q ss_pred cHHHHHHHHhcc------CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV------HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75 (216)
Q Consensus 2 gt~~ll~~~~~~------~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 75 (216)
|+.++++++... ++..+||++||.++.++... ....|+.||...|.+++.+++
T Consensus 139 g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~ 197 (272)
T 4e3z_A 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT---------------------QYVDYAASKAAIDTFTIGLAR 197 (272)
T ss_dssp HHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT---------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC---------------------CcchhHHHHHHHHHHHHHHHH
Confidence 455566655432 12458999999845553321 013399999999999988877
Q ss_pred Hc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 76 EN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 76 ~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+. |+++.+++|+.|.++..... ...........+ . ....+.+++|+|++++.++.... ..| .+++.|+
T Consensus 198 e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~---~-~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 198 EVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPS---V-PMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHGGGTEEEEEEEECSBC--------------------C---C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhc---C-CcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 54 89999999999988754321 111111111111 1 22346789999999999986432 234 5666543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.7e-06 Score=64.74 Aligned_cols=121 Identities=17% Similarity=0.076 Sum_probs=78.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 126 g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~ 183 (265)
T 1qsg_A 126 SFVAMAKACRSMLNPGSALLTLSYL-GAERAIP---------------------NYNVMGLAKASLEANVRYMANAMGPE 183 (265)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECG-GGTSBCT---------------------TTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhccCCEEEEEcch-hhccCCC---------------------CchHHHHHHHHHHHHHHHHHHHhhhc
Confidence 577888888764 112489999997 4331110 01249999999999999987764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++..... .........+..+. + ...+.+.+|+|+++..++.... ..| .+++.++
T Consensus 184 gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~---p-~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 184 GVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVT---P-IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253 (265)
T ss_dssp TEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcC---C-CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence 89999999999998764321 11223333332221 1 1236789999999999986432 234 5666544
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-06 Score=63.64 Aligned_cols=118 Identities=17% Similarity=0.146 Sum_probs=72.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||.++.++.. ....|+.||...+.+++.++.+
T Consensus 118 ~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 174 (249)
T 3f9i_A 118 ANFILNREAIKKMIQK-RYGRIINISSIVGIAGNP----------------------GQANYCASKAGLIGMTKSLSYEV 174 (249)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCCCC--CCS----------------------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCcEEEEEccHHhccCCC----------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 4555666553 33 446899999983333211 1134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++-... ...........+. ....+.+++|+|+++..++..... .| .+++.|+
T Consensus 175 ~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG 245 (249)
T 3f9i_A 175 ATRGITVNAVAPGFIKSDMTDK---LNEKQREAIVQKI----PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG 245 (249)
T ss_dssp GGGTEEEEEEEECCBC---------CCHHHHHHHHHHC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHcCcEEEEEecCccccCcccc---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 48999999999998765432 1222222222221 234588899999999999975432 34 5666654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-06 Score=63.53 Aligned_cols=121 Identities=15% Similarity=0.035 Sum_probs=78.0
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++.+. .+-.+||++||. ..+.... +...|+.||...+.+.+.++.+.
T Consensus 124 g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 181 (261)
T 2wyu_A 124 SLVAVARRAEPLLREGGGIVTLTYY-ASEKVVP---------------------KYNVMAIAKAALEASVRYLAYELGPK 181 (261)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEECG-GGTSBCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhccCCEEEEEecc-cccCCCC---------------------CchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 567888888764 112489999997 4331110 01349999999999999887654
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.+++|+.|+++..... .........+.... + ...+.+++|+|+++..++.... ..| .+++.++
T Consensus 182 gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---p-~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 182 GVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTA---P-LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251 (261)
T ss_dssp TCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcC---C-CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 89999999999998754321 11222333332221 1 1236789999999999986432 234 5666543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.6e-06 Score=63.61 Aligned_cols=121 Identities=16% Similarity=0.015 Sum_probs=77.1
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-- 77 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-- 77 (216)
|+.++++++... .+-.+||++||.+...+.. ....|+.||...+.+.+.++.+.
T Consensus 137 g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 194 (285)
T 2p91_A 137 SLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----------------------HYNVMGIAKAALESTVRYLAYDIAK 194 (285)
T ss_dssp HHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT----------------------TTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEccchhccCCC----------------------CccHHHHHHHHHHHHHHHHHHHhcc
Confidence 567788887664 1226899999973332211 01349999999999999887653
Q ss_pred -CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++..... .........+.... + ...+.+++|+|+++..++.... ..| .+++.++
T Consensus 195 ~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~---p-~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg 265 (285)
T 2p91_A 195 HGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVN---P-FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265 (285)
T ss_dssp TTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 89999999999998764321 11222222222221 1 1236789999999999986432 234 5666544
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.2e-06 Score=63.80 Aligned_cols=121 Identities=16% Similarity=0.077 Sum_probs=74.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +.+...+||++||. ..+... . +...|+.||...|.+.+.++.+.
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~iv~isS~-~~~~~~---------------~------~~~~Y~~sK~a~~~~~~~la~e~ 176 (261)
T 1gee_A 119 GAFLGSREAIKYFVENDIKGTVINMSSV-HEKIPW---------------P------LFVHYAASKGGMKLMTETLALEY 176 (261)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCG-GGTSCC---------------T------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCH-HhcCCC---------------C------CccHHHHHHHHHHHHHHHHHHHh
Confidence 3455555544 33115699999997 433110 0 11449999999999988877653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++++.++||+.|+++...... ........+... .+ ...+++.+|+|++++.++... ...| .+++.++
T Consensus 177 ~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 249 (261)
T 1gee_A 177 APKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESM---IP-MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp GGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence 899999999999987532100 011222222221 12 234789999999999998643 2234 5566543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.3e-06 Score=63.72 Aligned_cols=120 Identities=25% Similarity=0.250 Sum_probs=74.5
Q ss_pred cHHHHHHHHhcc---------CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV---------HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 72 (216)
Q Consensus 2 gt~~ll~~~~~~---------~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 72 (216)
|+.++++++... .+..++|++||.++..+... ...|+.||...+.+.+.
T Consensus 119 g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~ 176 (257)
T 3tpc_A 119 GTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG----------------------QAAYAASKGGVAALTLP 176 (257)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC----------------------CcchHHHHHHHHHHHHH
Confidence 456666666542 13457999999844432211 13499999999999988
Q ss_pred HHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 73 FAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 73 ~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
++.+ .|+++.+++|+.|.++..... .......+... .+....+.+.+|+|+++..+++.....| .+.+.|
T Consensus 177 la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~---~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tpc_A 177 AARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAAS---VPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDG 250 (257)
T ss_dssp HHHHHGGGTEEEEEEEECCBSCC-----------------CC---SSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECC
Confidence 8776 589999999999988654321 11111111111 1111357899999999999998765566 455654
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 251 G 251 (257)
T 3tpc_A 251 A 251 (257)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.4e-06 Score=64.95 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=76.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... +...|+.||...|.+.+.++.+.
T Consensus 126 ~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 182 (260)
T 2zat_A 126 ATVLMTKAVVPEMEKR-GGGSVLIVSSV-GAYHPFP---------------------NLGPYNVSKTALLGLTKNLAVEL 182 (260)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEEech-hhcCCCC---------------------CchhHHHHHHHHHHHHHHHHHHh
Confidence 4555556553 44 56799999997 5552211 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe-cCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA-GSV 150 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~ 150 (216)
|+++.+++|+.|.++...... ............ . ....+.+.+|+|+++..++.... ..| .+++. |..
T Consensus 183 ~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~---~-~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 257 (260)
T 2zat_A 183 APRNIRVNCLAPGLIKTNFSQVLW-MDKARKEYMKES---L-RIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTA 257 (260)
T ss_dssp GGGTEEEEEEEECSBCSSTTHHHH-SSHHHHHHHHHH---H-TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred cccCeEEEEEEECcccCccchhcc-cChHHHHHHHhc---C-CCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence 899999999999876421100 000111111111 0 22358899999999999986542 234 66666 444
Q ss_pred CC
Q 027969 151 AQ 152 (216)
Q Consensus 151 ~s 152 (216)
.+
T Consensus 258 ~s 259 (260)
T 2zat_A 258 SR 259 (260)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.3e-06 Score=64.65 Aligned_cols=124 Identities=17% Similarity=0.204 Sum_probs=72.6
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 138 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 194 (281)
T 3v2h_A 138 SSFHTIRGAIPPMKKK-GWGRIINIASAHGLVASPF----------------------KSAYVAAKHGIMGLTKTVALEV 194 (281)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECCcccccCCCC----------------------chHHHHHHHHHHHHHHHHHHHh
Confidence 456666665 444 4568999999843332211 1349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC---CCCceeehhhhHHHHHHhhcCCC--CCc-eEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPK--ASG-RYL 145 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~ 145 (216)
|+++.+++|+.|.++.......... ......... ..+. ....+++++|+|++++.++.... ..| .++
T Consensus 195 ~~~gI~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~ 273 (281)
T 3v2h_A 195 AESGVTVNSICPGYVLTPLVEKQIPDQA-RTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVS 273 (281)
T ss_dssp GGGTEEEEEEEECSBCC-----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEE
T ss_pred hhcCcEEEEEECCCCcCcchhhhcchhh-hhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEE
Confidence 8999999999999876432110000 000000000 0011 23458999999999999996542 234 566
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 274 vdGG 277 (281)
T 3v2h_A 274 MDGG 277 (281)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 6543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.41 E-value=8.3e-07 Score=66.03 Aligned_cols=121 Identities=20% Similarity=0.146 Sum_probs=74.5
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++.++..+++. +..+||++||. ..+.... ....|+.||...+.+.+.++.+. |+
T Consensus 118 ~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 174 (255)
T 2q2v_A 118 TRLALPGMRAR-NWGRIINIASV-HGLVGST---------------------GKAAYVAAKHGVVGLTKVVGLETATSNV 174 (255)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred HHHHHHHHHHc-CCcEEEEEcCc-hhccCCC---------------------CchhHHHHHHHHHHHHHHHHHHhcccCc
Confidence 34455555565 56799999998 4442110 01349999999999999988763 79
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHH---H----HHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEV---I----LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++.++||+.|+++............ . ..+.... . ....+++++|+|+++..++.... ..| .+++.++
T Consensus 175 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 175 TCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK--Q-PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251 (255)
T ss_dssp EEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT--C-TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred EEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc--C-CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence 9999999999886532100000000 0 1110111 1 22358999999999999986532 234 5666543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.39 E-value=4.9e-06 Score=60.53 Aligned_cols=122 Identities=17% Similarity=0.077 Sum_probs=79.5
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC-C
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG-I 79 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~ 79 (216)
|+.++++++... .+-.++|++||. ..+.... +...|+.||...+.+.+.++++.+ +
T Consensus 94 g~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~i 151 (223)
T 3uce_A 94 GAVLAAKHGARYLKQGGSITLTSGM-LSRKVVA---------------------NTYVKAAINAAIEATTKVLAKELAPI 151 (223)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eHHHHHHHHHhhccCCeEEEEecch-hhccCCC---------------------CchHHHHHHHHHHHHHHHHHHhhcCc
Confidence 567788887664 112489999997 4442111 113499999999999999988754 9
Q ss_pred cEEEEcCCCccCCCCCCCCCcc-HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
++.+++|+.|..+-........ ..+........ ....+.+.+|+|++++.+++.....| .+++.|+
T Consensus 152 ~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG 219 (223)
T 3uce_A 152 RVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL----PVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGG 219 (223)
T ss_dssp EEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred EEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC----CCCCccCHHHHHHHHHHHccCCCCCCcEEEecCC
Confidence 9999999999887543221111 11222222221 22347789999999999998665556 5566543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=5.8e-06 Score=61.59 Aligned_cols=120 Identities=17% Similarity=0.097 Sum_probs=77.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 116 g~~~~~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~ 172 (258)
T 3oid_A 116 ALLFCAQEAAKLMEKN-GGGHIVSISSL-GSIRYLE---------------------NYTTVGVSKAALEALTRYLAVEL 172 (258)
T ss_dssp HHHHHHHHHHHHHHTT-TCEEEEEEEEG-GGTSBCT---------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECch-hhCCCCC---------------------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 455666665 444 45689999998 4332110 11349999999999999988764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++++.+++|+.|..+-..... ............. ....+.+.+|+|+++.+++.... ..| .+++.|+
T Consensus 173 ~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 173 SPKQIIVNAVSGGAIDTDALKHFP-NREDLLEDARQNT----PAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp GGGTEEEEEEEECCBCSGGGGGCT-THHHHHHHHHHHC----TTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred hhcCcEEEEEeeCCCcChhhhhcc-cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 799999999999877543211 1122233332221 22347889999999999997532 334 5666544
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=3e-06 Score=63.25 Aligned_cols=120 Identities=15% Similarity=0.024 Sum_probs=75.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..++|++||. ..++... . . +...|+.||...+.+++.++.+
T Consensus 121 g~~~l~~~~~~~~~~~-~~g~iv~iss~-~~~~~~~-----~--------~------~~~~Y~asKaa~~~~~~~la~e~ 179 (264)
T 3i4f_A 121 AVFHLLKLVVPVMRKQ-NFGRIINYGFQ-GADSAPG-----W--------I------YRSAFAAAKVGLVSLTKTVAYEE 179 (264)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCT-TGGGCCC-----C--------T------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEeec-hhcccCC-----C--------C------CCchhHHHHHHHHHHHHHHHHHh
Confidence 456677766 455 55789999996 4442211 0 0 1134999999999999988776
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|+++..... ......... ... ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 180 ~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~---~~~-p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG 250 (264)
T 3i4f_A 180 AEYGITANMVCPGDIIGEMKEAT---IQEARQLKE---HNT-PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA 250 (264)
T ss_dssp GGGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred hhcCcEEEEEccCCccCccchhc---cHHHHHHHh---hcC-CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence 589999999999998765431 111111111 111 12246789999999999997542 234 5666543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-06 Score=64.36 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=76.4
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ .+. +..+||++||.++..+.. +...|+.||...+.+.+.++.+
T Consensus 140 g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 196 (273)
T 3uf0_A 140 AAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGGR----------------------NVAAYAASKHAVVGLTRALASEW 196 (273)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCS----------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEcchHhcCCCC----------------------CChhHHHHHHHHHHHHHHHHHHH
Confidence 455666655 334 457899999983333211 0134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++...... ........+.... ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 197 ~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG 269 (273)
T 3uf0_A 197 AGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARI----PAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG 269 (273)
T ss_dssp GGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHS----TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 5899999999999886532110 0112222222221 1234788999999999998753 2344 5666543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=9.4e-06 Score=60.71 Aligned_cols=117 Identities=17% Similarity=0.104 Sum_probs=77.9
Q ss_pred cHHHHHHHHh-----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA-----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~-----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++. +. +..+||++||.++.++... ...|+.||...+.+.+.++.+
T Consensus 138 g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e 194 (267)
T 4iiu_A 138 SFYNVIQPCIMPMIGAR-QGGRIITLSSVSGVMGNRG----------------------QVNYSAAKAGIIGATKALAIE 194 (267)
T ss_dssp HHHHHHHHHHHHHHHHT-SCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-CCcEEEEEcchHhccCCCC----------------------CchhHHHHHHHHHHHHHHHHH
Confidence 4566777653 33 4468999999845543211 134999999988888887765
Q ss_pred c---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 N---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 ~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
. |+++.+++|+.|..+.... ............ ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 195 ~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~----p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 195 LAKRKITVNCIAPGLIDTGMIEM----EESALKEAMSMI----PMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HGGGTEEEEEEEECSBCSTTCCC----CHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhcCeEEEEEEEeeecCCcccc----cHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 4 8999999999998876432 233333333332 1234778999999999998653 2334 5566554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=2.6e-06 Score=64.22 Aligned_cols=124 Identities=20% Similarity=0.187 Sum_probs=76.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +.+.-.+||++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 139 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~ 196 (280)
T 3pgx_A 139 GTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP----------------------GNGHYSASKHGLTALTNTLAIEL 196 (280)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC----------------------CchhHHHHHHHHHHHHHHHHHHh
Confidence 4556666653 332245899999983333211 0134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC-CCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA-FPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA 147 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~ 147 (216)
.|+++.+++|+.|.++..... .....+....... ...+ ....+.+++|+|+++.+++.... ..| .+++.
T Consensus 197 ~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd 274 (280)
T 3pgx_A 197 GEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVD 274 (280)
T ss_dssp GGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEES
T ss_pred hhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence 589999999999998764321 0111111111101 1222 22358999999999999986432 334 56666
Q ss_pred cC
Q 027969 148 GS 149 (216)
Q Consensus 148 ~~ 149 (216)
|+
T Consensus 275 GG 276 (280)
T 3pgx_A 275 KG 276 (280)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=63.89 Aligned_cols=142 Identities=16% Similarity=0.068 Sum_probs=72.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCC-CCCCCccccCCCCCCcc------cccccchhHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPV------LCKENKEWYSLAKTLAEEAA 70 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~-~~~~~~~~~E~~~~~~~------~~~~~~~~Y~~sK~~~E~~~ 70 (216)
|+.++++++. +. +..+||++||. ..+.... .......+.+.++.... ....+...|+.||...|.++
T Consensus 89 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~ 166 (257)
T 1fjh_A 89 GATELMDAFLPALKKG-HQPAAVVISSV-ASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166 (257)
T ss_dssp HHHHHHHHHHHHHHTS-SSCEEEEECCG-GGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CCcEEEEECCh-hhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHH
Confidence 4566666664 34 55799999998 5552111 00001111111100000 00012245999999999999
Q ss_pred HHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eE
Q 027969 71 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RY 144 (216)
Q Consensus 71 ~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~ 144 (216)
+.++++ .|+++.+++|+.|.++...... ........... ...+ ...+++.+|+|++++.++..+ ...| .+
T Consensus 167 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~-~~~~-~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~ 242 (257)
T 1fjh_A 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGL--QDPRYGESIAK-FVPP-MGRRAEPSEMASVIAFLMSPAASYVHGAQI 242 (257)
T ss_dssp HHTHHHHHHTTCEEEEEEECC------------------------CCCS-TTSCCCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHHHHhhcCeEEEEEeeCCCCCccchhhc--cchhHHHHHHh-cccc-cCCCCCHHHHHHHHHHHhCchhcCCcCCEE
Confidence 887765 4899999999999886533210 00001111110 0112 224789999999999999754 2335 45
Q ss_pred EEecC
Q 027969 145 LLAGS 149 (216)
Q Consensus 145 ~~~~~ 149 (216)
.+.|+
T Consensus 243 ~vdgG 247 (257)
T 1fjh_A 243 VIDGG 247 (257)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 55544
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.4e-06 Score=63.19 Aligned_cols=121 Identities=15% Similarity=0.106 Sum_probs=76.0
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 128 g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 184 (266)
T 3uxy_A 128 APFRICRAAIPLMAAA-GGGAIVNVASCWGLRPGP----------------------GHALYCLTKAALASLTQCMGMDH 184 (266)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCC----------------------CChHHHHHHHHHHHHHHHHHHHh
Confidence 556677766 444 457899999983332211 11349999999999999887764
Q ss_pred ---CCcEEEEcCCCccCCCCCCC---CC-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEe
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPI---LN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLA 147 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~ 147 (216)
|+++.+++|+.|.++..... .. ........+.... ....+.+.+|+|++++.++.... ..| .+++.
T Consensus 185 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd 260 (266)
T 3uxy_A 185 APQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV----PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVN 260 (266)
T ss_dssp GGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred hhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence 89999999999987542100 00 0111112222221 22357899999999999997542 234 56665
Q ss_pred cC
Q 027969 148 GS 149 (216)
Q Consensus 148 ~~ 149 (216)
|+
T Consensus 261 GG 262 (266)
T 3uxy_A 261 GG 262 (266)
T ss_dssp TT
T ss_pred cC
Confidence 43
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=5.4e-06 Score=61.81 Aligned_cols=111 Identities=20% Similarity=0.171 Sum_probs=73.3
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+++. +..+||++||. ..+.... +...|+.||...|.+.+.++++ .|++
T Consensus 121 ~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (260)
T 1nff_A 121 RAVVKPMKEA-GRGSIINISSI-EGLAGTV---------------------ACHGYTATKFAVRGLTKSTALELGPSGIR 177 (260)
T ss_dssp HHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHhc-CCCEEEEEeeh-hhcCCCC---------------------CchhHHHHHHHHHHHHHHHHHHhCccCcE
Confidence 4455555555 56799999998 4442110 1134999999999999988765 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+.++||+.|+++.... .. . .+ ...+ ...+.+.+|+|+++..++.... ..| .+++.++
T Consensus 178 v~~v~Pg~v~t~~~~~--~~-~----~~----~~~~-~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 178 VNSIHPGLVKTPMTDW--VP-E----DI----FQTA-LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237 (260)
T ss_dssp EEEEEECCBCSGGGTT--SC-T----TC----SCCS-SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEEeCCCCCCcccc--ch-h----hH----HhCc-cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 9999999999876321 00 0 00 1112 2347899999999999986532 234 5666544
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.35 E-value=7.1e-07 Score=66.26 Aligned_cols=113 Identities=21% Similarity=0.197 Sum_probs=54.3
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +..+||++||. ..|... ..|+.||...|.+++.++++. +++
T Consensus 129 ~~~~~~~~~~-~~g~iv~isS~-~~~~~~------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~ 182 (253)
T 3qiv_A 129 RAVYKKMTKR-GGGAIVNQSST-AAWLYS------------------------NYYGLAKVGINGLTQQLSRELGGRNIR 182 (253)
T ss_dssp HHHHHHHHHH-TCEEEEEECC------------------------------------CCHHHHHHHHHHHHHHTTTTTEE
T ss_pred HHHHHHHHhc-CCCEEEEECCc-cccCCC------------------------chhHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 4445555555 45789999997 544110 239999999999999988775 799
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC--Cc-eEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA--SG-RYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 148 (216)
+.+++|+.|.++..... ....+...+.++. ....+.+++|+|+++..++..... .| .|++.+
T Consensus 183 v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 183 INAIAPGPIDTEANRTT--TPKEMVDDIVKGL----PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp EEEEEC-------------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred EEEEEecCCcccchhhc--CcHHHHHHHhccC----CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 99999999998754321 1111122222211 222366789999999999865332 34 666553
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=7.1e-06 Score=61.23 Aligned_cols=119 Identities=22% Similarity=0.181 Sum_probs=77.0
Q ss_pred cHHHHHHHHhcc---CCccEEEEccccccc-ccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~v-y~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++... .+..++|++||.++. .+.. ....|+.||...+.+.+.++.+
T Consensus 122 g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------------------~~~~Y~asK~a~~~l~~~la~e~ 179 (262)
T 3pk0_A 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYP----------------------GWSHYGATKAAQLGFMRTAAIEL 179 (262)
T ss_dssp HHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC----------------------CChhhHHHHHHHHHHHHHHHHHH
Confidence 455555655432 144689999997332 2111 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++.... ........+.... + ...+.+.+|+|+++.+++... ...| .+.+.|+
T Consensus 180 ~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~---p-~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 250 (262)
T 3pk0_A 180 APHKITVNAIMPGNIMTEGLLE---NGEEYIASMARSI---P-AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250 (262)
T ss_dssp GGGTCEEEEEEECSBCCHHHHT---TCHHHHHHHHTTS---T-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhCcEEEEEEeCcCcCccccc---cCHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 58999999999998875332 1223333333331 1 223678999999999998643 2344 5666644
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-05 Score=59.94 Aligned_cols=112 Identities=18% Similarity=0.102 Sum_probs=72.6
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+++. +..+||++||. ..+.... +...|+.||...+.+.+.++.+ .|++
T Consensus 119 ~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 175 (254)
T 1hdc_A 119 KTVIPAMKDA-GGGSIVNISSA-AGLMGLA---------------------LTSSYGASKWGVRGLSKLAAVELGTDRIR 175 (254)
T ss_dssp HHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCCEEEEECch-hhccCCC---------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 4566666665 56799999998 4432110 1134999999999999888765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCC-C--CCCcee-ehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSF-A--FPYIFV-EIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~i-~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+.++||+.|+++... ...... ..+ . ....+. +.+|+|+++..++... ...| .+.+.|+
T Consensus 176 v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 241 (254)
T 1hdc_A 176 VNSVHPGMTYTPMTA-----------ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp EEEEEECSBCCHHHH-----------HHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEecccCcCcccc-----------ccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 999999999875311 111111 111 1 112367 9999999999998653 2334 5556544
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.9e-06 Score=61.96 Aligned_cols=98 Identities=21% Similarity=0.246 Sum_probs=59.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||. ..+.... ....|+.||...|.+++.++++ .|+++.+++|+.|.++-
T Consensus 126 g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 126 GCVIYINSG-AGNGPHP---------------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp CEEEEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred CeEEEEcCc-ccccCCC---------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 589999997 4442211 1134999999999999998775 48999999999998764
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
.... ..... ..+ ....+++.+|+|+++..+++.+..+..+++.
T Consensus 184 ~~~~-------~~~~~---~~~-~~~~~~~p~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 184 LQGL-------MDSQG---TNF-RPEIYIEPKEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp -----------------------CCGGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred hhhh-------hhhhh---ccc-ccccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence 3210 00000 001 2334789999999999999887766666543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.34 E-value=6e-06 Score=61.47 Aligned_cols=122 Identities=15% Similarity=0.010 Sum_probs=73.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +..+..++|++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 117 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 174 (257)
T 3imf_A 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP----------------------GVIHSAAAKAGVLAMTKTLAVEW 174 (257)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC----------------------CcHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666652 222346899999983333211 0134999999999988887643
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++...........+....... . ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 175 ~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 249 (257)
T 3imf_A 175 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS---V-PLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG 249 (257)
T ss_dssp HHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT---S-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 48999999999998876432110000011111111 1 12347889999999999996532 234 5666543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=7.6e-06 Score=61.45 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=72.7
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 133 g~~~~~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~ 189 (273)
T 1ae1_A 133 AAYHLSQIAYPLLKAS-QNGNVIFLSSI-AGFSALP---------------------SVSLYSASKGAINQMTKSLACEW 189 (273)
T ss_dssp HHHHHHHHHHHHHHHH-TSEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcCH-hhcCCCC---------------------CcchhHHHHHHHHHHHHHHHHHH
Confidence 4556666663 34 45799999998 5553211 11349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCc---cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNF---GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
|+++.+++|+.|+++........ .......+... .+ ...+.+.+|+|+++..++... ...| .+.+.|
T Consensus 190 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 265 (273)
T 1ae1_A 190 AKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK---TP-MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG 265 (273)
T ss_dssp GGGTEEEEEEEECSBC-------------CHHHHHHHHHH---ST-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECC
Confidence 89999999999998764321100 11222222221 11 124789999999999998643 2234 555554
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 266 G 266 (273)
T 1ae1_A 266 G 266 (273)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.3e-06 Score=61.34 Aligned_cols=113 Identities=15% Similarity=0.094 Sum_probs=72.0
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 121 g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~ 177 (266)
T 3p19_A 121 GLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFP----------------------DHAAYCGTKFAVHAISENVREEV 177 (266)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcChhhCCCCC----------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 344544444 444 557999999983332211 0134999999999999988775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
.|+++.+++|+.|..+...... ............ . ....+++.+|+|+++++++..+....
T Consensus 178 ~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~--~-~~~r~~~pedvA~av~~l~~~~~~~~ 240 (266)
T 3p19_A 178 AASNVRVMTIAPSAVKTELLSHTT--SQQIKDGYDAWR--V-DMGGVLAADDVARAVLFAYQQPQNVC 240 (266)
T ss_dssp GGGTCEEEEEEECSBSSSGGGGCS--CHHHHHHHHHHH--H-HTTCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred cccCcEEEEEeeCccccchhhccc--chhhhHHHHhhc--c-cccCCCCHHHHHHHHHHHHcCCCCcc
Confidence 4899999999999887543211 111111111000 0 12347889999999999998765543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-05 Score=60.61 Aligned_cols=118 Identities=15% Similarity=0.060 Sum_probs=76.6
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++++++.+.+. +..+||++||. ..+... ... +...|+.||...|.+++.++.+. +
T Consensus 152 ~~~~~~~~~~~-~~~~iv~isS~-~~~~~~-------------~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~~- 209 (279)
T 3ctm_A 152 SHNIGKIFKKN-GKGSLIITSSI-SGKIVN-------------IPQ------LQAPYNTAKAACTHLAKSLAIEWAPFA- 209 (279)
T ss_dssp HHHHHHHHHHH-TCCEEEEECCC-TTSCC----------------C------CHHHHHHHHHHHHHHHHHHHHHTTTTC-
T ss_pred HHHHHHHHHhc-CCCeEEEECch-HhccCC-------------CCC------CcccHHHHHHHHHHHHHHHHHHhcccC-
Confidence 56777777776 66899999997 433110 001 11459999999999999988763 6
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++.+++|+.+.++-... ............. ....+++.+|+|+++..++... ...| .+++.|+
T Consensus 210 ~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~----p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG 275 (279)
T 3ctm_A 210 RVNTISPGYIDTDITDF---ASKDMKAKWWQLT----PLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275 (279)
T ss_dssp EEEEEEECSBSSTTTSS---CCHHHHHHHHHHS----TTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CEEEEeccCCccccccc---cChHHHHHHHHhC----CccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 89999999998775421 1122222222111 1224889999999999999753 2334 5666544
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.31 E-value=6.2e-06 Score=61.08 Aligned_cols=123 Identities=11% Similarity=0.093 Sum_probs=66.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||. ..+.... +...|+.||...|.+.+.++.+
T Consensus 108 g~~~~~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 164 (250)
T 2fwm_X 108 GAFNLFQQTMNQFRRQ-RGGAIVTVASD-AAHTPRI---------------------GMSAYGASKAALKSLALSVGLEL 164 (250)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECch-hhCCCCC---------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 455666666 444 45799999998 4442110 1134999999999999988765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHH-HHHcC--C--CCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEE
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVIL-NLING--D--QSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLL 146 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~~--~--~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~ 146 (216)
.|+++.++||+.+.++...... ....... .+... . ...| ...+.+.+|+|+++..++... ...| .+.+
T Consensus 165 ~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p-~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~v 242 (250)
T 2fwm_X 165 AGSGVRCNVVSPGSTDTDMQRTLW-VSDDAEEQRIRGFGEQFKLGIP-LGKIARPQEIANTILFLASDLASHITLQDIVV 242 (250)
T ss_dssp GGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred CccCCEEEEEECCcccCccccccc-cChhHHHHHHhhhhhcccccCC-CCCCcCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence 3899999999999987543210 0000011 11100 0 0112 123789999999999998753 2334 5555
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 243 dGG 245 (250)
T 2fwm_X 243 DGG 245 (250)
T ss_dssp STT
T ss_pred CCC
Confidence 543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=6.4e-06 Score=61.19 Aligned_cols=121 Identities=16% Similarity=0.064 Sum_probs=75.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||.++.++.. ....|+.||...+.+.+.++++.
T Consensus 107 g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 163 (254)
T 1zmt_A 107 RPFALVNAVASQMKKR-KSGHIIFITSATPFGPWK----------------------ELSTYTSARAGACTLANALSKEL 163 (254)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECCcccccCCC----------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 4455666553 33 446899999973332211 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCc-----cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNF-----GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLL 146 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~ 146 (216)
|+++.+++|+.|+|+........ .......+... .+ ...+.+.+|+|+++..++.... ..| .+.+
T Consensus 164 ~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~---~p-~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~v 239 (254)
T 1zmt_A 164 GEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV---TA-LQRLGTQKELGELVAFLASGSCDYLTGQVFWL 239 (254)
T ss_dssp GGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH---SS-SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEE
T ss_pred hhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc---CC-CCCCcCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence 89999999999998864332100 01111111111 11 1237789999999999987533 234 4555
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 240 dgG 242 (254)
T 1zmt_A 240 AGG 242 (254)
T ss_dssp STT
T ss_pred CCC
Confidence 544
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.31 E-value=5.9e-06 Score=61.36 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=73.4
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+.+. +..+||++||.++..+.. +...|+.||...+.+.+.++++ .|+++.+
T Consensus 134 ~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 190 (256)
T 3ezl_A 134 IDGMVER-GWGRIINISSVNGQKGQF----------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT 190 (256)
T ss_dssp HHHHHHH-TCEEEEEECCCCGGGSCS----------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred HHHHHhc-CCCEEEEEcchhhccCCC----------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 3334445 557899999984443221 1134999999999999888765 4899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++|+.|..+.... ........+.... ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 191 v~PG~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (256)
T 3ezl_A 191 VSPGYIGTDMVKA---IRPDVLEKIVATI----PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252 (256)
T ss_dssp EEECSBCCHHHHT---SCHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEECcccCccccc---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 9999997764322 1233333333322 2234778999999999998643 2344 5666544
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.31 E-value=6.8e-06 Score=62.42 Aligned_cols=118 Identities=21% Similarity=0.201 Sum_probs=77.2
Q ss_pred cHHHHHHHHh----ccCCccEEEEccccccc-ccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~v-y~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++. +. +..+||++||.++. ++.. ....|+.||...+.+.+.++.+
T Consensus 153 g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e 209 (293)
T 3rih_A 153 GTVYTVQACLAPLTAS-GRGRVILTSSITGPVTGYP----------------------GWSHYGASKAAQLGFMRTAAIE 209 (293)
T ss_dssp HHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBBCT----------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCCCC----------------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 5667777763 44 55789999997332 3211 1134999999999999988775
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|+++.... ....+...+.... + ...+...+|+|+++.+++... ...| .+++.|+
T Consensus 210 ~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~---p-~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG 281 (293)
T 3rih_A 210 LAPRGVTVNAILPGNILTEGLVD---MGEEYISGMARSI---P-MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281 (293)
T ss_dssp HGGGTCEEEEEEECSBCCHHHHH---TCHHHHHHHHTTS---T-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhhCeEEEEEecCCCcCcchhh---ccHHHHHHHHhcC---C-CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 48999999999999875321 1123333333332 2 123567899999999998643 2344 5666544
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=3e-06 Score=63.81 Aligned_cols=122 Identities=18% Similarity=0.146 Sum_probs=75.5
Q ss_pred cHHHHHHHHhcc-----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~-----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++.+. .+..+||++||.++.++.. ....|+.||...+.+.+.++.+
T Consensus 133 g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e 190 (277)
T 2rhc_B 133 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV----------------------HAAPYSASKHGVVGFTKALGLE 190 (277)
T ss_dssp HHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC----------------------CCccHHHHHHHHHHHHHHHHHH
Confidence 556677766542 1457999999984433211 1134999999999999988765
Q ss_pred c---CCcEEEEcCCCccCCCCCCCCCc--c------HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-
Q 027969 77 N---GIDLVAIHPGTVIGPFFQPILNF--G------AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG- 142 (216)
Q Consensus 77 ~---~~~~~ilR~~~v~G~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 142 (216)
. |+++.+++|+.|.++........ . .......... . ....+++.+|+|+++..++..+ ...|
T Consensus 191 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~~~dvA~~v~~l~s~~~~~~tG~ 266 (277)
T 2rhc_B 191 LARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR---V-PIGRYVQPSEVAEMVAYLIGPGAAAVTAQ 266 (277)
T ss_dssp HTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH---S-TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHhCchhcCCCCc
Confidence 3 79999999999987642110000 0 0111111111 1 1235889999999999998653 2234
Q ss_pred eEEEecC
Q 027969 143 RYLLAGS 149 (216)
Q Consensus 143 ~~~~~~~ 149 (216)
.+++.|+
T Consensus 267 ~~~vdGG 273 (277)
T 2rhc_B 267 ALNVCGG 273 (277)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 5666654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=1.4e-05 Score=58.94 Aligned_cols=118 Identities=15% Similarity=0.117 Sum_probs=76.4
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..++|++||.++..+.. ....|+.||...+.+.+.++++
T Consensus 116 ~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 172 (247)
T 3lyl_A 116 SIFRMSKECVRGMMKK-RWGRIISIGSVVGSAGNP----------------------GQTNYCAAKAGVIGFSKSLAYEV 172 (247)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCC----------------------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 45566665543 3 446899999984443221 1134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-... ............. ....+.+++|+|+++..++.... ..| .+++.|+
T Consensus 173 ~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~----~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 243 (247)
T 3lyl_A 173 ASRNITVNVVAPGFIATDMTDK---LTDEQKSFIATKI----PSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243 (247)
T ss_dssp GGGTEEEEEEEECSBCCTTTTT---SCHHHHHHHHTTS----TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHcCeEEEEEeeCcEecccchh---ccHHHHHHHhhcC----CCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence 48999999999998776432 1222222222221 23357899999999999986532 234 5666543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.4e-06 Score=61.79 Aligned_cols=121 Identities=16% Similarity=0.106 Sum_probs=75.5
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.||...|.+.+.++.+.
T Consensus 121 g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 177 (260)
T 2ae2_A 121 AAYHLSVLAHPFLKAS-ERGNVVFISSV-SGALAVP---------------------YEAVYGATKGAMDQLTRCLAFEW 177 (260)
T ss_dssp HHHHHHHHHHHHHHHT-SSEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcch-hhccCCC---------------------CcchHHHHHHHHHHHHHHHHHHH
Confidence 5566777663 34 56799999997 4432110 11349999999999999988764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCc--cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNF--GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++++.+++|+.+.++........ ....+....... + ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 178 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 178 AKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---A-LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253 (260)
T ss_dssp GGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---T-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---C-CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 89999999999987532110000 011111222221 1 234889999999999998643 2234 5566543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.29 E-value=7.5e-06 Score=60.21 Aligned_cols=122 Identities=17% Similarity=0.136 Sum_probs=75.2
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||. ..+.... . . +...|+.||...|.+.+.++++.
T Consensus 104 ~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~-----------~--~------~~~~Y~~sK~a~~~~~~~la~e~ 162 (239)
T 2ekp_A 104 VAFLLAQAAAPHMAEA-GWGRVLFIGSV-TTFTAGG-----------P--V------PIPAYTTAKTALLGLTRALAKEW 162 (239)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSCCT-----------T--S------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECch-hhccCCC-----------C--C------CCccHHHHHHHHHHHHHHHHHHh
Confidence 344555555 444 56799999998 5543210 0 0 11349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.++||+.+.++...... ........+... .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 163 ~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~---~p-~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 235 (239)
T 2ekp_A 163 ARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITAR---IP-MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235 (239)
T ss_dssp GGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence 899999999999876432100 011222222221 12 224789999999999998643 2334 4555544
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.2e-05 Score=59.91 Aligned_cols=116 Identities=14% Similarity=0.029 Sum_probs=71.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 132 g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 188 (260)
T 3gem_A 132 APYLINLHCEPLLTAS-EVADIVHISDDVTRKGSS----------------------KHIAYCATKAGLESLTLSFAARF 188 (260)
T ss_dssp HHHHHHHHHHHHHHTS-SSCEEEEECCGGGGTCCS----------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCCC----------------------CcHhHHHHHHHHHHHHHHHHHHH
Confidence 4555666553 33 456899999983333211 11349999999999999988765
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
++++.+++|+.|..+.... .......... . ...-+...+|+|++++.+++.....| .+++.|+
T Consensus 189 ~~~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~---~-p~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG 254 (260)
T 3gem_A 189 APLVKVNGIAPALLMFQPKDD-----AAYRANALAK---S-ALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGG 254 (260)
T ss_dssp TTTCEEEEEEECTTCC-----------------------C-CSCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred CCCCEEEEEeecccccCCCCC-----HHHHHHHHhc---C-CCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence 5999999999997654221 1111111111 1 11235678999999999997665556 5666643
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.7e-05 Score=59.75 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=76.6
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ .+. +..++|++||. ..+.... +...|+.||...+.+.+.++.+
T Consensus 133 g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~ 189 (281)
T 3s55_A 133 GTFNTIAAVAPGMIKR-NYGRIVTVSSM-LGHSANF---------------------AQASYVSSKWGVIGLTKCAAHDL 189 (281)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGGSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECCh-hhcCCCC---------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 456666665 334 44689999998 4432111 1134999999999999998875
Q ss_pred --cCCcEEEEcCCCccCCCCCCCC----------CccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCC--CC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPIL----------NFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPK--AS 141 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~--~~ 141 (216)
.|+++.+++|+.|+++...... ............. .. ....+.+++|+|+++.+++.... ..
T Consensus 190 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~dvA~~v~~L~s~~~~~it 266 (281)
T 3s55_A 190 VGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS---LHLQYAPFLKPEEVTRAVLFLVDEASSHIT 266 (281)
T ss_dssp GGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH---HCSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred hhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh---hhccCcCCCCHHHHHHHHHHHcCCcccCCC
Confidence 4899999999999998653210 0000000000000 01 22568999999999999997543 23
Q ss_pred c-eEEEecC
Q 027969 142 G-RYLLAGS 149 (216)
Q Consensus 142 ~-~~~~~~~ 149 (216)
| .+++.|+
T Consensus 267 G~~i~vdgG 275 (281)
T 3s55_A 267 GTVLPIDAG 275 (281)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 4 5666543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.27 E-value=6e-06 Score=61.51 Aligned_cols=119 Identities=10% Similarity=0.046 Sum_probs=72.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +..+||++||. ..+.... +...|+.||...+.+.+.++.+. |++
T Consensus 125 ~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 181 (260)
T 2z1n_A 125 RRAAEQMVEK-GWGRMVYIGSV-TLLRPWQ---------------------DLALSNIMRLPVIGVVRTLALELAPHGVT 181 (260)
T ss_dssp HHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHhc-CCcEEEEECch-hhcCCCC---------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 4444455555 56799999998 5442210 11349999999999998887654 899
Q ss_pred EEEEcCCCccCCCCCCCCC------ccH-HH-HHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILN------FGA-EV-ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~------~~~-~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+.++||+.|+++....... ... .. ...+. ...+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 182 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p-~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG 257 (260)
T 2z1n_A 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA---SRIP-MGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257 (260)
T ss_dssp EEEEEECHHHHCCCC--------------------------CCT-TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred EEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH---hcCC-CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 9999999999876431000 000 00 00000 1112 223789999999999998753 2334 4555543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-05 Score=59.14 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=76.6
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..++|++||.++.++... ...|+.||...+.+.+.++.+
T Consensus 117 g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~l~~~la~e~ 173 (248)
T 3op4_A 117 SIFRLSKAVLRGMMKK-RQGRIINVGSVVGTMGNAG----------------------QANYAAAKAGVIGFTKSMAREV 173 (248)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHH
Confidence 45566666543 4 4468999999844443211 134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-... ............. ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 174 ~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG 244 (248)
T 3op4_A 174 ASRGVTVNTVAPGFIETDMTKA---LNDEQRTATLAQV----PAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244 (248)
T ss_dssp GGGTEEEEEEEECSBSSTTTTT---SCHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhCeEEEEEeeCCCCCchhhh---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 38999999999998765432 1222222222221 22347899999999999986432 234 5566544
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.26 E-value=1e-05 Score=59.75 Aligned_cols=115 Identities=20% Similarity=0.147 Sum_probs=72.5
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~ 81 (216)
.++..+++. +..+||++||.++.++.. ....|+.||...+.+.+.++.+ .|+++
T Consensus 123 ~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 179 (246)
T 2uvd_A 123 AVSRFMMRQ-RHGRIVNIASVVGVTGNP----------------------GQANYVAAKAGVIGLTKTSAKELASRNITV 179 (246)
T ss_dssp HHHHHHHHH-TCEEEEEECCTHHHHCCT----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHHHHHHc-CCcEEEEECCHHhcCCCC----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 344444444 557999999984444321 0134999999999988887654 38999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.+++|+.|..+...... .......... .+ ...+++.+|+|+++..++... ...| .+.+.|+
T Consensus 180 ~~v~Pg~v~t~~~~~~~---~~~~~~~~~~---~p-~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 243 (246)
T 2uvd_A 180 NAIAPGFIATDMTDVLD---ENIKAEMLKL---IP-AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG 243 (246)
T ss_dssp EEEEECSBGGGCSSCCC---TTHHHHHHHT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEeccccCcchhhcC---HHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence 99999999876533211 1111122221 12 224789999999999998643 2234 5555543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=2.9e-06 Score=63.51 Aligned_cols=128 Identities=16% Similarity=0.023 Sum_probs=78.1
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.++|++||.++..+... ...|+.||...+.+.+.++++.
T Consensus 131 ~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~ 188 (271)
T 3ek2_A 131 SFPALAKAALPMLSDDASLLTLSYLGAERAIPN----------------------YNTMGLAKAALEASVRYLAVSLGAK 188 (271)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----------------------TTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccCceEEEEeccccccCCCC----------------------ccchhHHHHHHHHHHHHHHHHHHhc
Confidence 567788888664 12348999999733332110 1349999999999999887653
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEe-cCCCCH
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLA-GSVAQH 153 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~-~~~~s~ 153 (216)
|+++.+++|+.|..+-.... .............. ....+...+|+|++++.++... ...| .+++. |..+++
T Consensus 189 gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~ 263 (271)
T 3ek2_A 189 GVRVNAISAGPIKTLAASGI-KSFGKILDFVESNS----PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVV 263 (271)
T ss_dssp TCEEEEEEECCC-----CCC-HHHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred CcEEEEEecCcccchhhhcc-cchHHHHHHHHhcC----CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence 89999999999987654321 11122222222221 1234678999999999999752 3345 56665 444554
Q ss_pred HHH
Q 027969 154 SDI 156 (216)
Q Consensus 154 ~el 156 (216)
.++
T Consensus 264 ~~~ 266 (271)
T 3ek2_A 264 GGM 266 (271)
T ss_dssp CCC
T ss_pred hhh
Confidence 444
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=7.8e-06 Score=62.00 Aligned_cols=120 Identities=17% Similarity=0.122 Sum_probs=77.5
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 160 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~ 217 (291)
T 3ijr_A 160 SYFHVTKAALSHLKQGDVIINTASIVAYEGNET----------------------LIDYSATKGAIVAFTRSLSQSLVQK 217 (291)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----------------------ChhHHHHHHHHHHHHHHHHHHHhhc
Confidence 677888888764 23358999999833332211 1349999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++..... ........+..+ . ....+.+.+|+|++++.++... ...| .+++.|+
T Consensus 218 gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~---~-p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 286 (291)
T 3ijr_A 218 GIRVNGVAPGPIWTPLIPSS--FDEKKVSQFGSN---V-PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG 286 (291)
T ss_dssp TCEEEEEEECSBCSTHHHHH--SCHHHHHHTTTT---S-TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CEEEEEEeeCCCcCCccccc--CCHHHHHHHHcc---C-CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence 89999999999988642110 011111111111 1 2334778999999999998653 2344 5566544
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.26 E-value=5.8e-06 Score=61.92 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=71.9
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+.+. +..+||++||.++.++.. ....|+.||...+.+.+.++.+ .|++
T Consensus 141 ~~~~~~~~~~-~~g~Iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~ 197 (266)
T 3grp_A 141 RELIHSMMRR-RYGRIINITSIVGVVGNP----------------------GQTNYCAAKAGLIGFSKALAQEIASRNIT 197 (266)
T ss_dssp HHHHHHHHHH-TCEEEEEECCC-----------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCcEEEEECCHHHcCCCC----------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 3444444445 457899999984444321 1134999999999999888765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+.+++|+.|.++-... ........+.... ....+.+.+|+|+++.+++.... ..| .+++.|+
T Consensus 198 vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~----p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3grp_A 198 VNCIAPGFIKSAMTDK---LNEKQKEAIMAMI----PMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262 (266)
T ss_dssp EEEEEECSBCSHHHHT---CCHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEeeCcCCCchhhc---cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 9999999998764322 1122233333322 22346789999999999986532 234 5666544
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.6e-05 Score=58.54 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=69.8
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||. ..+.... +...|+.||...|.+++.++.+
T Consensus 120 ~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 176 (244)
T 2bd0_A 120 GTFFLTQALFALMERQ-HSGHIFFITSV-AATKAFR---------------------HSSIYCMSKFGQRGLVETMRLYA 176 (244)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEEecc-hhcCCCC---------------------CCchhHHHHHHHHHHHHHHHHHh
Confidence 4566666664 33 55799999997 5542210 1134999999999999877653
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
.|+++.++||+.|+++...... . . ....+++.+|+|++++.++..+.
T Consensus 177 ~~~gi~v~~v~Pg~v~t~~~~~~~-~-----------~----~~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 177 RKCNVRITDVQPGAVYTPMWGKVD-D-----------E----MQALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp TTTTEEEEEEEECCBCSTTTCCCC-S-----------T----TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred hccCcEEEEEECCCccchhhhhcc-c-----------c----ccccCCCHHHHHHHHHHHHhCCc
Confidence 4899999999999998643211 0 0 01257899999999999997653
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.25 E-value=9.2e-06 Score=61.21 Aligned_cols=105 Identities=24% Similarity=0.240 Sum_probs=69.7
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 92 (216)
-.+||++||.++..+.. ....|+.||...+.+.+.++.+. |+++.+++|+.|..+
T Consensus 166 ~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 223 (281)
T 3ppi_A 166 RGALVLTASIAGYEGQI----------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP 223 (281)
T ss_dssp CEEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CeEEEEEecccccCCCC----------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence 35899999983333211 11349999999999988887654 899999999999765
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
-... ............. +....+.+.+|+|+++..++..+...| .+++.|
T Consensus 224 ~~~~---~~~~~~~~~~~~~---~~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG 274 (281)
T 3ppi_A 224 IMES---VGEEALAKFAANI---PFPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG 274 (281)
T ss_dssp HHHT---TCHHHHHHHHHTC---CSSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred hhhc---ccHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence 3221 1222333333332 111457899999999999998766666 455653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.25 E-value=8.7e-06 Score=60.74 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=74.6
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.+ .+...++|++||. ..+.... ....|+.||...|.+.+.++.+.
T Consensus 120 g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 177 (263)
T 3ak4_A 120 GVFLANQIACRHFLASNTKGVIVNTASL-AAKVGAP---------------------LLAHYSASKFAVFGWTQALAREM 177 (263)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeccc-ccccCCC---------------------CchhHHHHHHHHHHHHHHHHHHH
Confidence 45566665543 3115789999997 4431110 11349999999999998887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC-------Cc-cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-e
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL-------NF-GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-R 143 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 143 (216)
|+++.++||+.|+++...... .. .......+... .+ ...+++.+|+|+++..++... ...| .
T Consensus 178 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~~~~~~~dvA~~v~~l~s~~~~~~tG~~ 253 (263)
T 3ak4_A 178 APKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---TP-LGRIEEPEDVADVVVFLASDAARFMTGQG 253 (263)
T ss_dssp GGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred hHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence 899999999999886421100 00 01111111111 11 234889999999999998653 2334 5
Q ss_pred EEEecC
Q 027969 144 YLLAGS 149 (216)
Q Consensus 144 ~~~~~~ 149 (216)
+++.|+
T Consensus 254 ~~vdgG 259 (263)
T 3ak4_A 254 INVTGG 259 (263)
T ss_dssp EEESSS
T ss_pred EEECcC
Confidence 666543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=8.4e-06 Score=60.73 Aligned_cols=121 Identities=19% Similarity=0.140 Sum_probs=70.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++.++.. +...|+.||...+.+.+.++.+.
T Consensus 117 g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 173 (260)
T 1x1t_A 117 AVFHGTAAALPHMKKQ-GFGRIINIASAHGLVASA----------------------NKSAYVAAKHGVVGFTKVTALET 173 (260)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECcHHhCcCCC----------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 4455555553 34 457999999983333211 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCcc--------HHHHHHH-HcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFG--------AEVILNL-INGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG- 142 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 142 (216)
|+++.+++|+.|.++......... ......+ ... . ....+.+.+|+|+++..++... ...|
T Consensus 174 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~~~~~p~dva~~~~~l~s~~~~~~tG~ 249 (260)
T 1x1t_A 174 AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK---Q-PSLQFVTPEQLGGTAVFLASDAAAQITGT 249 (260)
T ss_dssp TTTTEEEEEEEECCBCC------------------------CHHHH---C-TTCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred ccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc---C-CCCCCcCHHHHHHHHHHHhChhhcCCCCC
Confidence 899999999999887533210000 0000000 000 0 1234889999999999998643 2334
Q ss_pred eEEEecC
Q 027969 143 RYLLAGS 149 (216)
Q Consensus 143 ~~~~~~~ 149 (216)
.+++.|+
T Consensus 250 ~~~vdgG 256 (260)
T 1x1t_A 250 TVSVDGG 256 (260)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 5566543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=3.9e-06 Score=63.91 Aligned_cols=121 Identities=12% Similarity=0.015 Sum_probs=75.8
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++... .+..++|++||. ..++.. ....|+.+|...+.+.+.++++.
T Consensus 134 g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~ 190 (303)
T 1yxm_A 134 GTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFP----------------------LAVHSGAARAGVYNLTKSLALEWA 190 (303)
T ss_dssp HHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCT----------------------TCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEee-cccCCC----------------------cchhhHHHHHHHHHHHHHHHHHhc
Confidence 567788876541 134689999997 433211 01349999999999998887764
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCc-cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNF-GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.++||+.|+|+........ .......+.. ..+ ...+.+++|+|+++..++.... ..| .+++.++
T Consensus 191 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~p-~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 191 CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ---KIP-AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG---GST-TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCeEEEEEecCCcccchhhhhccccchHHHHHHHh---cCc-ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 89999999999999842111100 0111111111 111 2247899999999999986532 334 5666644
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=8.9e-06 Score=60.36 Aligned_cols=120 Identities=15% Similarity=0.099 Sum_probs=73.9
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c--
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N-- 77 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~-- 77 (216)
++.++..+++. + .+||++||. ..+.... +...|+.||...|.+.+.++.+ .
T Consensus 119 ~~~~~~~~~~~-~-g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~ 174 (253)
T 1hxh_A 119 CQQGIAAMKET-G-GSIINMASV-SSWLPIE---------------------QYAGYSASKAAVSALTRAAALSCRKQGY 174 (253)
T ss_dssp HHHHHHHHTTT-C-EEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHc-C-CEEEEEcch-hhcCCCC---------------------CCccHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 34455556665 5 799999998 4442110 1134999999999999888765 3
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
++++.++||+.|+++....... ........... ...+ ...+.+.+|+|+++..++.... ..| .+.+.|+
T Consensus 175 gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~p-~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 247 (253)
T 1hxh_A 175 AIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPKLNR-AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp CEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTTTBT-TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhccCc-cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 8999999999999864211000 00001101110 0112 2247899999999999987542 334 5556554
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=3.1e-06 Score=62.81 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=74.8
Q ss_pred cHHHHHHHHhcc--C-C---ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV--H-S---IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75 (216)
Q Consensus 2 gt~~ll~~~~~~--~-~---~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 75 (216)
|+.++++++... . + ..+||++||. ..+.... ....|+.||...|.+.+.+++
T Consensus 110 g~~~l~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~ 167 (254)
T 1sby_A 110 GLVNTTTAILDFWDKRKGGPGGIIANICSV-TGFNAIH---------------------QVPVYSASKAAVVSFTNSLAK 167 (254)
T ss_dssp HHHHHHHHHHHHHCGGGTCCCEEEEEECCG-GGTSCCT---------------------TSHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEECch-hhccCCC---------------------CchHHHHHHHHHHHHHHHHHH
Confidence 566677766532 0 1 3579999998 5442211 013499999999999998876
Q ss_pred H---cCCcEEEEcCCCccCCCCCCCCCcc--HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEecC
Q 027969 76 E---NGIDLVAIHPGTVIGPFFQPILNFG--AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 149 (216)
Q Consensus 76 ~---~~~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 149 (216)
+ .++++.+++|+.|.++......... ...+.... ....+.+++|+|++++.+++....+..|++.++
T Consensus 168 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 168 LAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-------LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-------TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred HhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-------hcCCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence 5 5899999999999886422110000 00011111 122355899999999999875444446766643
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.6e-05 Score=58.47 Aligned_cols=119 Identities=16% Similarity=0.072 Sum_probs=76.0
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.++|++||..+..+... ....|+.||...+.+.+.++.+.
T Consensus 143 g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 201 (271)
T 3v2g_A 143 APFVAIRSASRHLGDGGRIITIGSNLAELVPWP---------------------GISLYSASKAALAGLTKGLARDLGPR 201 (271)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST---------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC---------------------CchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 566777777653 23358999999633322100 11349999999999999887754
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+-..... .. ........ ....+...+|+|+++..++... ...| .+.+.|+
T Consensus 202 gIrvn~v~PG~v~T~~~~~~~-~~---~~~~~~~~----~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 268 (271)
T 3v2g_A 202 GITVNIVHPGSTDTDMNPADG-DH---AEAQRERI----ATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268 (271)
T ss_dssp TCEEEEEEECSBCSSSSCSSC-SS---HHHHHHTC----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEecCCCcCCcccccc-hh---HHHHHhcC----CCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence 899999999999887643321 11 11121221 1223678999999999998542 3344 5555543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.3e-05 Score=58.45 Aligned_cols=120 Identities=14% Similarity=0.052 Sum_probs=71.0
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++... ++..+||++||.++..+.. +...|+.||...+.+++.++.+
T Consensus 135 ~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------------~~~~Y~~sKaa~~~~~~~la~e~ 192 (266)
T 3o38_A 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH----------------------SQSHYAAAKAGVMALTRCSAIEA 192 (266)
T ss_dssp HHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC----------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence 455666665442 2346899999973332211 1134999999999999988775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+...... ........... . ....+.+.+|+|+++..++... ...| .+++.++
T Consensus 193 ~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~---~-~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 264 (266)
T 3o38_A 193 VEFGVRINAVSPSIARHKFLEKTS--SSELLDRLASD---E-AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264 (266)
T ss_dssp GGGTEEEEEEEECCCCC-------------------C---C-TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHcCcEEEEEeCCcccchhhhccC--cHHHHHHHHhc---C-CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence 4899999999999876532210 01111111111 0 2335789999999999998753 2334 4555543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-05 Score=60.08 Aligned_cols=119 Identities=20% Similarity=0.140 Sum_probs=72.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+++. +..+||++||.++..+.. +...|+.||...+.+.+.++.+ .|++
T Consensus 133 ~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 189 (267)
T 1iy8_A 133 EKVLKIMREQ-GSGMVVNTASVGGIRGIG----------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189 (267)
T ss_dssp HHHHHHHHHH-TCCEEEEECCGGGTSBCS----------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHc-CCCEEEEEcchhhccCCC----------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeE
Confidence 3455555555 557999999983333211 1134999999999999888765 4899
Q ss_pred EEEEcCCCccCCCCCC-----CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQP-----ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+.+++|+.|.++.... ...........+... .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 190 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG 262 (267)
T 1iy8_A 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---NP-SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262 (267)
T ss_dssp EEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT---CT-TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred EEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc---CC-CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 9999999998764211 000001111122111 12 124789999999999998653 2344 4555543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-05 Score=59.34 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=76.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 122 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~ 178 (256)
T 3gaf_A 122 SLFRLSQLAAPHMQKA-GGGAILNISSM-AGENTNV---------------------RMASYGSSKAAVNHLTRNIAFDV 178 (256)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCG-GGTCCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcCH-HHcCCCC---------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 4566666653 34 44689999998 4331111 01349999999999999988753
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+..... ........+.... ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 179 ~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~----p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG 250 (256)
T 3gaf_A 179 GPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKHT----PLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250 (256)
T ss_dssp GGGTEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhCcEEEEEEEccccCchhhhc--cCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence 89999999999987542210 0122222232221 2234788999999999998643 2234 5666643
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=7.8e-06 Score=60.39 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=75.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||. ..+.... . +...|+.||...|.+.+.++.+.
T Consensus 108 g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~--------------~------~~~~Y~~sK~a~~~~~~~la~e~ 165 (246)
T 2ag5_A 108 SMYLMIKAFLPKMLAQ-KSGNIINMSSV-ASSVKGV--------------V------NRCVYSTTKAAVIGLTKSVAADF 165 (246)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCS-BTTTBCC--------------T------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEEech-HhCcCCC--------------C------CCccHHHHHHHHHHHHHHHHHHh
Confidence 4555666654 34 45799999997 4332110 0 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC---CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
|+++.++||+.|+++...... .........+... .+ ...+.+.+|+|+++..++... ...| .+.+.|
T Consensus 166 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg 241 (246)
T 2ag5_A 166 IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR---QK-TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (246)
T ss_dssp GGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT---CT-TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred hhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 899999999999987421100 0011112222221 11 224789999999999998643 2334 455554
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 242 G 242 (246)
T 2ag5_A 242 G 242 (246)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.5e-05 Score=58.52 Aligned_cols=115 Identities=22% Similarity=0.148 Sum_probs=75.1
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||.++.++... ...|+.||...+.+.+.++.+
T Consensus 140 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~l~~~la~e~ 196 (269)
T 4dmm_A 140 GVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMGNPG----------------------QANYSAAKAGVIGLTKTVAKEL 196 (269)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCCCC----------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 4556666653 33 4468999999844443211 134999999999998888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC---CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-... . ......... ....+.+.+|+|+++..++..+. ..| .+++.|+
T Consensus 197 ~~~gi~vn~v~PG~v~T~~~~~----~--~~~~~~~~~----p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 197 ASRGITVNAVAPGFIATDMTSE----L--AAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp GGGTCEEEEEEECCBTTSCSCH----H--HHHHHGGGC----TTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred hhhCcEEEEEEECCCcCccccc----c--cHHHHHhcC----CCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence 48999999999998765321 1 112222221 12347789999999999997632 234 5666543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.6e-06 Score=62.92 Aligned_cols=121 Identities=12% Similarity=0.012 Sum_probs=76.1
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 163 g~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 220 (294)
T 3r3s_A 163 ALFWITQEAIPLLPKGASIITTSSI-QAYQPSP---------------------HLLDYAATKAAILNYSRGLAKQVAEK 220 (294)
T ss_dssp HHHHHHHHHGGGCCTTCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhcCCEEEEECCh-hhccCCC---------------------CchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 577888888764 112489999998 5442211 11349999999999999887764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++...... .....+..+. ... ....+.+.+|+|++++.++... ...| .+++.|+
T Consensus 221 gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~---~~~-p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 290 (294)
T 3r3s_A 221 GIRVNIVAPGPIWTALQISGG-QTQDKIPQFG---QQT-PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290 (294)
T ss_dssp TCEEEEEEECSBCSHHHHTTT-SCGGGSTTTT---TTS-TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEecCcCccccccccC-CCHHHHHHHH---hcC-CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 899999999999875411100 0000000000 001 2234788999999999998643 2334 5666543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.9e-06 Score=62.30 Aligned_cols=121 Identities=17% Similarity=0.074 Sum_probs=75.5
Q ss_pred cHHHHHHHHhc------cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAK------VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 75 (216)
Q Consensus 2 gt~~ll~~~~~------~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 75 (216)
|+.++++++.. . +..+||++||.++..+... ...|+.||...+.+.+.++.
T Consensus 135 g~~~l~~~~~~~~~~~~~-~~g~iV~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~ 191 (279)
T 3sju_A 135 GVFRVTREVLRAGGMREA-GWGRIVNIASTGGKQGVMY----------------------AAPYTASKHGVVGFTKSVGF 191 (279)
T ss_dssp HHHHHHHHHHHHSSHHHH-TCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhchhhHhhc-CCcEEEEECChhhccCCCC----------------------ChhHHHHHHHHHHHHHHHHH
Confidence 55667776644 3 4468999999833332110 13499999999999998887
Q ss_pred H---cCCcEEEEcCCCccCCCCCC-------CCC-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc
Q 027969 76 E---NGIDLVAIHPGTVIGPFFQP-------ILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 142 (216)
Q Consensus 76 ~---~~~~~~ilR~~~v~G~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 142 (216)
+ .|+++.+++|+.|.++-... ... ........+.... ....+.+++|+|+++..++.... ..|
T Consensus 192 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~a~~itG 267 (279)
T 3sju_A 192 ELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI----PLGRYSTPEEVAGLVGYLVTDAAASITA 267 (279)
T ss_dssp HTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHTSSGGGGCCS
T ss_pred HHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCccccCcCC
Confidence 6 48999999999997653210 000 0112222222221 12347889999999999987532 334
Q ss_pred -eEEEecC
Q 027969 143 -RYLLAGS 149 (216)
Q Consensus 143 -~~~~~~~ 149 (216)
.+++.|+
T Consensus 268 ~~i~vdGG 275 (279)
T 3sju_A 268 QALNVCGG 275 (279)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 5666554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-05 Score=59.03 Aligned_cols=94 Identities=15% Similarity=0.099 Sum_probs=58.8
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 92 (216)
..+||++||..+.++... ++.+.. +...|+.||...|.+++.++++. ++++.++||+.|.++
T Consensus 144 ~~~iv~isS~~~~~~~~~---------~~~~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (250)
T 1yo6_A 144 RAAVITISSGLGSITDNT---------SGSAQF------PVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp TCEEEEECCGGGCSTTCC---------STTSSS------CBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred CcEEEEeccCccccCCcc---------cccccC------CccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence 578999999844443211 111111 22459999999999999988764 899999999999765
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCceEEE
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASGRYLL 146 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 146 (216)
.... ..+++.+|+|++++.++.... ..|.|+.
T Consensus 209 ~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~ 242 (250)
T 1yo6_A 209 LGGK----------------------NAALTVEQSTAELISSFNKLDNSHNGRFFM 242 (250)
T ss_dssp --------------------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred CCCC----------------------CCCCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence 4211 135689999999999997654 3455543
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.21 E-value=9e-06 Score=60.27 Aligned_cols=109 Identities=16% Similarity=0.069 Sum_probs=73.3
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
|+.++++++... ..-.+||++||.++.++.. ....|+.||...|.+++.++++
T Consensus 122 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sKaa~~~~~~~la~e~~~~ 179 (251)
T 3orf_A 122 SAFASAHIGAKLLNQGGLFVLTGASAALNRTS----------------------GMIAYGATKAATHHIIKDLASENGGL 179 (251)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------------------TBHHHHHHHHHHHHHHHHHTSTTSSS
T ss_pred HHHHHHHHHHHhhccCCEEEEEechhhccCCC----------------------CCchhHHHHHHHHHHHHHHHHHhccc
Confidence 566777777653 1124899999983333211 1134999999999999998876
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC---CCCCc-eEEEe
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV---PKASG-RYLLA 147 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~-~~~~~ 147 (216)
.++++.+++|+.|..+- ........ ....+++.+|+|+++..++.. ....| .+.+.
T Consensus 180 ~~gi~v~~v~PG~v~t~~-----------~~~~~~~~----~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~ 240 (251)
T 3orf_A 180 PAGSTSLGILPVTLDTPT-----------NRKYMSDA----NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFE 240 (251)
T ss_dssp CTTCEEEEEEESCBCCHH-----------HHHHCTTS----CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred CCCcEEEEEecCcCcCcc-----------hhhhcccc----cccccCCHHHHHHHHHHHhcCccccCCcceEEEEe
Confidence 47999999999986532 22222221 233578899999999999977 33345 45443
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-05 Score=60.01 Aligned_cols=120 Identities=23% Similarity=0.287 Sum_probs=73.9
Q ss_pred cHHHHHHHHhcc---C------CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV---H------SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 72 (216)
Q Consensus 2 gt~~ll~~~~~~---~------~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 72 (216)
|+.++++++... . +..+||++||. ..+.... +...|+.||...+.+.+.
T Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~ 183 (265)
T 2o23_A 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV-AAFEGQV---------------------GQAAYSASKGGIVGMTLP 183 (265)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT-HHHHCCT---------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh-hhcCCCC---------------------CCchhHHHHHHHHHHHHH
Confidence 456677766542 1 34689999998 4442211 113499999999999888
Q ss_pred HHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 73 FAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 73 ~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
++.+ .++++.+++|+.|.++..... ........... .+....+++.+|+|++++.+++.+...| .+.+.|
T Consensus 184 la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 184 IARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQ---VPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCC-------------CHHHHT---CSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHhhcCcEEEEEEeccccCcccccc---CHHHHHHHHHc---CCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence 7765 389999999999987653211 00011111111 1111347899999999999997665555 555554
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 258 G 258 (265)
T 2o23_A 258 A 258 (265)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=6.6e-06 Score=61.16 Aligned_cols=121 Identities=13% Similarity=0.068 Sum_probs=73.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++.++.. +...|+.||...|.+.+.++.+.
T Consensus 111 g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 167 (256)
T 2d1y_A 111 APMHLSALAAREMRKV-GGGAIVNVASVQGLFAEQ----------------------ENAAYNASKGGLVNLTRSLALDL 167 (256)
T ss_dssp HHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSBCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEccccccCCCC----------------------CChhHHHHHHHHHHHHHHHHHHH
Confidence 4566666654 33 567999999984433221 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC---CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
++++.+++|+.+.++...... ............. . ....+++++|+|+++..++... ...| .+++.+
T Consensus 168 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g 243 (256)
T 2d1y_A 168 APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDL---H-ALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG 243 (256)
T ss_dssp GGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTT---S-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence 899999999999764311000 0000000001111 1 2235899999999999998754 2334 566654
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 244 G 244 (256)
T 2d1y_A 244 G 244 (256)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=5.7e-06 Score=61.84 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=74.9
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+ .++|++||.+...+... ...|+.||...+.+.+.++.+
T Consensus 123 g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~ 179 (264)
T 3ucx_A 123 GALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAK----------------------YGAYKMAKSALLAMSQTLATELG 179 (264)
T ss_dssp HHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCc----------------------cHHHHHHHHHHHHHHHHHHHHhC
Confidence 455666665432 13 58999999833332111 134999999999999988876
Q ss_pred -cCCcEEEEcCCCccCCCCCCCC-------C-ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eE
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPIL-------N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RY 144 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~ 144 (216)
.|+++.+++|+.|+++...... . ....+......+. ....+.+.+|+|+++.+++... ...| .+
T Consensus 180 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i 255 (264)
T 3ucx_A 180 EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS----DLKRLPTEDEVASAILFMASDLASGITGQAL 255 (264)
T ss_dssp TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS----SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC----CcccCCCHHHHHHHHHHHcCccccCCCCCEE
Confidence 5899999999999876422100 0 0011122222221 2234789999999999998643 2334 56
Q ss_pred EEecC
Q 027969 145 LLAGS 149 (216)
Q Consensus 145 ~~~~~ 149 (216)
++.|+
T Consensus 256 ~vdGG 260 (264)
T 3ucx_A 256 DVNCG 260 (264)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 66544
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.4e-05 Score=57.55 Aligned_cols=122 Identities=16% Similarity=0.016 Sum_probs=76.8
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..++|++||. ..+.... . ....|+.||...+.+.+.++.+.
T Consensus 120 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~--------------~------~~~~Y~asKaa~~~l~~~la~e~ 177 (280)
T 3tox_A 120 SAFLAAKYQVPAIAAL-GGGSLTFTSSF-VGHTAGF--------------A------GVAPYAASKAGLIGLVQALAVEL 177 (280)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCS-BTTTBCC--------------T------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEEcCh-hhCcCCC--------------C------CchhHHHHHHHHHHHHHHHHHHh
Confidence 4555666554 33 34689999997 4441100 0 11349999999999999988764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC-CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++...... .........+.... ....+.+.+|+|++++.++... ...| .+++.|+
T Consensus 178 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 252 (280)
T 3tox_A 178 GARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH----ALKRIARPEEIAEAALYLASDGASFVTGAALLADGG 252 (280)
T ss_dssp HTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC----ccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence 899999999999987643211 11122222222221 1234788999999999999753 2334 5666644
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-05 Score=59.48 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=72.8
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..+||++||.++.++.. ....|+.||...+.+.+.++++
T Consensus 115 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~ 171 (247)
T 1uzm_A 115 GAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGIG----------------------NQANYAASKAGVIGMARSIAREL 171 (247)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCCCC---------------------------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEECCHhhccCCC----------------------CChhHHHHHHHHHHHHHHHHHHh
Confidence 45566666543 4 567999999984444321 0134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++-... ............ .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 172 ~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~---~p-~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG 242 (247)
T 1uzm_A 172 SKANVTANVVAPGYIDTDMTRA---LDERIQQGALQF---IP-AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242 (247)
T ss_dssp GGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGG---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCcEEEEEEeCCCcccchhh---cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence 48999999999997653211 011111111111 12 224789999999999998643 2244 5555544
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=2.9e-05 Score=57.98 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=78.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||.++..+.. ....|+.||...+.+.+.++++.
T Consensus 125 ~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 182 (266)
T 3oig_A 125 SLTAVVKAARPMMTEGGSIVTLTYLGGELVMP----------------------NYNVMGVAKASLDASVKYLAADLGKE 182 (266)
T ss_dssp HHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT----------------------TTHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhhcCCCceEEEEecccccccCC----------------------CcchhHHHHHHHHHHHHHHHHHHhhc
Confidence 566788887764 1225899999983333211 01349999999999999887653
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+...... ........+.... ....+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 183 gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG 252 (266)
T 3oig_A 183 NIRVNSISAGPIRTLSAKGIS-DFNSILKDIEERA----PLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252 (266)
T ss_dssp TEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcEEEEEecCccccccccccc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence 799999999999886543221 2223333332221 1224678999999999999753 2344 5566543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=7.3e-07 Score=66.78 Aligned_cols=128 Identities=19% Similarity=0.116 Sum_probs=75.1
Q ss_pred HHHHHHHHhccC--CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHH-----H
Q 027969 3 TLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA-----K 75 (216)
Q Consensus 3 t~~ll~~~~~~~--~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~ 75 (216)
++.++..+.+.+ +..+||++||. ..+.... ....|+.||...+.+.+.++ .
T Consensus 117 ~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~~ala~e~~ 174 (267)
T 2gdz_A 117 TYLGLDYMSKQNGGEGGIIINMSSL-AGLMPVA---------------------QQPVYCASKHGIVGFTRSAALAANLM 174 (267)
T ss_dssp HHHHHHHHCGGGTCCCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCEEEEeCCc-cccCCCC---------------------CCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 456666665541 25789999998 5442211 01349999999999988742 2
Q ss_pred HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCC--C-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEe-cCC
Q 027969 76 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--A-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSV 150 (216)
Q Consensus 76 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~ 150 (216)
..|+++.+++|+.|.++..... ...........-...+ + ....+++.+|+|++++.++......| .+++. +..
T Consensus 175 ~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~ 252 (267)
T 2gdz_A 175 NSGVRLNAICPGFVNTAILESI--EKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKG 252 (267)
T ss_dssp TCCEEEEEEEESCBSSHHHHGG--GCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTE
T ss_pred cCCcEEEEEecCcCcchhhhcc--ccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCc
Confidence 3489999999999977532110 0000000000000000 1 12347899999999999998655555 56665 444
Q ss_pred CCHH
Q 027969 151 AQHS 154 (216)
Q Consensus 151 ~s~~ 154 (216)
.++.
T Consensus 253 ~~~~ 256 (267)
T 2gdz_A 253 IHFQ 256 (267)
T ss_dssp EEEC
T ss_pred cccc
Confidence 4443
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7e-06 Score=61.79 Aligned_cols=121 Identities=14% Similarity=0.045 Sum_probs=76.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 139 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 195 (277)
T 4fc7_A 139 GTFNVSRVLYEKFFRD-HGGVIVNITATLGNRGQAL----------------------QVHAGSAKAAVDAMTRHLAVEW 195 (277)
T ss_dssp HHHHHHHHHHHHTHHH-HCEEEEEECCSHHHHTCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCCC----------------------cHHHHHHHHHHHHHHHHHHHHh
Confidence 4566666663 23 3368999999844443211 1349999999999999887754
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++.................... ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 196 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG 269 (277)
T 4fc7_A 196 GPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS----PLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG 269 (277)
T ss_dssp GGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC----CCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence 89999999999987632110001122222222221 1224678999999999999742 2344 5566543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.6e-05 Score=59.85 Aligned_cols=128 Identities=19% Similarity=0.185 Sum_probs=79.1
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. .+.-.+||++||.++.++... + .+ ....|+.||...+.+.+.++.+.
T Consensus 132 g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~-~~-----~~~~Y~asKaa~~~~~~~la~e~ 193 (278)
T 3sx2_A 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS------------A-DP-----GSVGYVAAKHGVVGLMRVYANLL 193 (278)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC------------S-SH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc------------C-CC-----CchHhHHHHHHHHHHHHHHHHHH
Confidence 45666666543 212358999999844443211 0 01 11349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHH-cCC--CCCC--CCCceeehhhhHHHHHHhhcCC--CCCc-eEEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLI-NGD--QSFA--FPYIFVEIRDVVYAHIRALEVP--KASG-RYLL 146 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~--~~~~--~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~ 146 (216)
|+++.+++|+.|.++..... .....+.... ... ..+. ....+++.+|+|+++.+++... ...| .+++
T Consensus 194 ~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~v 271 (278)
T 3sx2_A 194 AGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPV 271 (278)
T ss_dssp GGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred hccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeE
Confidence 79999999999988764321 1112222211 111 1222 2256899999999999998643 2344 5666
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 272 dGG 274 (278)
T 3sx2_A 272 DAG 274 (278)
T ss_dssp STT
T ss_pred CCC
Confidence 544
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.5e-05 Score=58.92 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=69.2
Q ss_pred cHHHHHHH----HhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRS----CAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~----~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.+++++ +++. +..+||++||. ..+.... +...|+.||...+.+.+.++++
T Consensus 116 g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~ 172 (249)
T 2ew8_A 116 SGFLMAKAFVPGMKRN-GWGRIINLTST-TYWLKIE---------------------AYTHYISTKAANIGFTRALASDL 172 (249)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGGSCCS---------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCeEEEEEcch-hhccCCC---------------------CchhHHHHHHHHHHHHHHHHHHH
Confidence 34444554 4455 55799999998 5442110 1134999999999999998765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++...... ... ...... ....+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 173 ~~~gi~v~~v~Pg~v~t~~~~~~~--~~~-~~~~~~-~~~~~-~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG 245 (249)
T 2ew8_A 173 GKDGITVNAIAPSLVRTATTEASA--LSA-MFDVLP-NMLQA-IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245 (249)
T ss_dssp GGGTEEEEEEEECCC----------------------CTTSS-SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred HhcCcEEEEEecCcCcCccchhcc--ccc-hhhHHH-HhhCc-cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence 3899999999999886532100 000 000000 00122 123789999999999998643 2334 4555544
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=3e-05 Score=58.20 Aligned_cols=121 Identities=16% Similarity=0.049 Sum_probs=76.8
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.+||++||.+..++.. +...|+.||...+.+.+.++++.
T Consensus 122 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 179 (275)
T 2pd4_A 122 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMA----------------------HYNVMGLAKAALESAVRYLAVDLGKH 179 (275)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT----------------------TCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccCCEEEEEecchhcCCCC----------------------CchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 567788888764 1125899999973333211 11349999999999999887764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++-.... .........+.... + ...+.+.+|+|+++..++... ...| .+.+.++
T Consensus 180 gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~---p-~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg 249 (275)
T 2pd4_A 180 HIRVNALSAGPIRTLASSGI-ADFRMILKWNEINA---P-LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249 (275)
T ss_dssp TCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEeeCccccchhhhc-cccHHHHHHHHhcC---C-cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 89999999999988753321 11122222222221 1 123678999999999998642 2244 4555543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-05 Score=60.67 Aligned_cols=132 Identities=17% Similarity=0.183 Sum_probs=80.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.++|++||.++..+... .+..|..+.. +...|+.||...+.+.+.++++.
T Consensus 131 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~~~~~~~~------~~~~Y~asK~a~~~~~~~la~e~~~~ 199 (287)
T 3pxx_A 131 GVINTVHAALPYLTSGASIITTGSVAGLIAAAQ-----PPGAGGPQGP------GGAGYSYAKQLVDSYTLQLAAQLAPQ 199 (287)
T ss_dssp HHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC-----CC-----CHH------HHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred hhHHHHHHHHHHhhcCcEEEEeccchhcccccc-----cccccccCCC------ccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 677888888764 23358999999844443321 2222222111 12459999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--C----------CCC-CCCceeehhhhHHHHHHhhcCC--CCCc
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--Q----------SFA-FPYIFVEIRDVVYAHIRALEVP--KASG 142 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~----------~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~~ 142 (216)
|+++.+++|+.|..+-.... .......... . ... ....+.+.+|+|+++.+++... ...|
T Consensus 200 gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG 274 (287)
T 3pxx_A 200 SIRANVIHPTNVNTDMLNSA-----PMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTG 274 (287)
T ss_dssp TCEEEEEEESSBSSTTTSSH-----HHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred CcEEEEEecCcccccccccc-----chhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCC
Confidence 89999999999988764321 1111111000 0 011 1256899999999999998643 2344
Q ss_pred -eEEEecC
Q 027969 143 -RYLLAGS 149 (216)
Q Consensus 143 -~~~~~~~ 149 (216)
.+++.|+
T Consensus 275 ~~i~vdGG 282 (287)
T 3pxx_A 275 LQFKVDAG 282 (287)
T ss_dssp CEEEESTT
T ss_pred ceEeECch
Confidence 5666543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.6e-05 Score=58.99 Aligned_cols=109 Identities=18% Similarity=0.095 Sum_probs=70.3
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||.++..+... ...|+.||...+.+.+.++.+
T Consensus 150 g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 206 (287)
T 3rku_A 150 ALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYPT----------------------GSIYCASKFAVGAFTDSLRKEL 206 (287)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEECChhhcCCCCC----------------------CchHHHHHHHHHHHHHHHHHHh
Confidence 455666665 344 4468999999844332211 134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 140 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 140 (216)
.|+++.+++|+.|..+-................. ....+..+|+|++++.++..+..
T Consensus 207 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------~~~p~~pedvA~~v~~l~s~~~~ 265 (287)
T 3rku_A 207 INTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK-------DTTPLMADDVADLIVYATSRKQN 265 (287)
T ss_dssp TTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT-------TSCCEEHHHHHHHHHHHHTSCTT
T ss_pred hhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc-------ccCCCCHHHHHHHHHHHhCCCCC
Confidence 4899999999999765311000011111122222 12345899999999999976543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=3.5e-05 Score=58.05 Aligned_cols=121 Identities=14% Similarity=-0.017 Sum_probs=77.0
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++++... .+..+||++||.++..+.. ....|+.||...+.+.+.++++
T Consensus 142 ~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaal~~~~~~la~e~~~ 199 (280)
T 3nrc_A 142 SFAALAKEGRSMMKNRNASMVALTYIGAEKAMP----------------------SYNTMGVAKASLEATVRYTALALGE 199 (280)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT----------------------TTHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeccccccCCC----------------------CchhhHHHHHHHHHHHHHHHHHHHH
Confidence 456677766542 1336899999983332211 1134999999999999988765
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+...... ............. ....+...+|+|++++.++.... ..| .+++.|+
T Consensus 200 ~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 200 DGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVS----PLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp GTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHS----TTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred cCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence 4899999999999886543211 1222332222221 12236789999999999987532 344 5566543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.7e-05 Score=59.45 Aligned_cols=118 Identities=19% Similarity=0.130 Sum_probs=71.5
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..++|++||.++..+.. +...|+.||...+.+++.++++
T Consensus 141 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~ 197 (271)
T 4iin_A 141 SAFIGCREALKVMSKS-RFGSVVNVASIIGERGNM----------------------GQTNYSASKGGMIAMSKSFAYEG 197 (271)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CCCEEEEEechhhcCCCC----------------------CchHhHHHHHHHHHHHHHHHHHH
Confidence 344444444 344 457899999984443221 1134999999999999988776
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.++++.+++|+.|..+-.... .......... .. ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 198 ~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~---~~-~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG 268 (271)
T 4iin_A 198 ALRNIRFNSVTPGFIETDMNANL---KDELKADYVK---NI-PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG 268 (271)
T ss_dssp HTTTEEEEEEEECSBCCC---------------CGG---GC-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhCcEEEEEEeCcccCCchhhh---cHHHHHHHHh---cC-CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence 489999999999976543210 0000000000 11 23358899999999999987532 344 5566543
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.13 E-value=6.1e-06 Score=63.44 Aligned_cols=114 Identities=15% Similarity=0.094 Sum_probs=60.9
Q ss_pred cHHHHHHHHhcc---------CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV---------HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 72 (216)
Q Consensus 2 gt~~ll~~~~~~---------~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 72 (216)
|+.++++++... .+-.+||++||.+++.+... ...|+.||...+.+.+.
T Consensus 121 g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~----------------------~~~Y~aSKaal~~~~~~ 178 (319)
T 3ioy_A 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS----------------------PGIYNTTKFAVRGLSES 178 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS----------------------SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC----------------------CHHHHHHHHHHHHHHHH
Confidence 566666666543 02347999999844432211 13499999966665555
Q ss_pred HHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCC-ceeehhhhHHHHHHhhcCC
Q 027969 73 FAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPY-IFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 73 ~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~-~~i~v~D~a~~~~~~~~~~ 138 (216)
++.+ .|+++++++|+.|.++-..... .....+....... .... ... ..++.+|+|++++.+++.+
T Consensus 179 la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 179 LHYSLLKYEIGVSVLCPGLVKSYIYASDD-IRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp HHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred HHHHhhhcCCEEEEEEcCeEccCcccccc-cCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 5432 3899999999999876543211 1111111111100 0111 111 1379999999999999874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.13 E-value=4e-05 Score=56.91 Aligned_cols=125 Identities=18% Similarity=0.030 Sum_probs=78.5
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..-.++|++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 116 g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 173 (255)
T 4eso_A 116 GAFFTVQRLTPLIREGGSIVFTSSVADEGGHP----------------------GMSVYSASKAALVSFASVLAAELLPR 173 (255)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT----------------------TBHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------------------CchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 566778887653 1225899999983333211 11349999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccH----HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC-CCCCc-eEEEec-CC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGA----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-PKASG-RYLLAG-SV 150 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~-~~ 150 (216)
|+++.+++|+.|..+...... ... .+....... . ....+.+.+|+|+++..++.. ....| .+++.| ..
T Consensus 174 gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~---~-p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~ 248 (255)
T 4eso_A 174 GIRVNSVSPGFIDTPTKGVAG-ITEAERAEFKTLGDNI---T-PMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLG 248 (255)
T ss_dssp TCEEEEEEECSBCCSSTTCTT-SCHHHHHHHHHHHHHH---S-TTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTT
T ss_pred CcEEEEEecCcccCccccccc-CChhhHHHHHHHHhcc---C-CCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCcc
Confidence 899999999999887543211 111 111111111 1 122467899999999998864 22334 566654 34
Q ss_pred CCH
Q 027969 151 AQH 153 (216)
Q Consensus 151 ~s~ 153 (216)
.++
T Consensus 249 ~~l 251 (255)
T 4eso_A 249 QKL 251 (255)
T ss_dssp TTB
T ss_pred ccC
Confidence 443
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.12 E-value=7.9e-05 Score=55.11 Aligned_cols=121 Identities=17% Similarity=0.119 Sum_probs=77.3
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.++|++||.++..+... ...|+.||...+.+.+.++++.
T Consensus 125 g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~ 182 (255)
T 3icc_A 125 APFFIIQQALSRLRDNSRIINISSAATRISLPD----------------------FIAYSMTKGAINTMTFTLAKQLGAR 182 (255)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC----------------------cchhHHhHHHHHHHHHHHHHHHHhc
Confidence 566778877653 12358999999833332110 1349999999999999887753
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++++.+++|+.|..+-..... ............. ....+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 183 gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (255)
T 3icc_A 183 GITVNAILPGFVKTDMNAELL-SDPMMKQYATTIS----AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252 (255)
T ss_dssp TCEEEEEEECCBCCSSSTTTT-TSHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CeEEEEEEEeeecccchhhhc-ccHHHHHhhhccC----CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence 899999999999877543321 1111122222221 1234778999999999988643 2344 5566544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.9e-05 Score=58.69 Aligned_cols=87 Identities=20% Similarity=0.224 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
..|+.||...+.+.+.++.+ .|+++.+++|+.|..+-... ............. +....+.+.+|+|+++..
T Consensus 161 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~---~~~~r~~~p~dva~~v~~ 234 (257)
T 3tl3_A 161 AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS---LPEEARASLGKQV---PHPSRLGNPDEYGALAVH 234 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTS---SSSCSCBCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh---ccHHHHHHHHhcC---CCCCCccCHHHHHHHHHH
Confidence 34999999999999888765 38999999999998765432 1222222222221 111347889999999999
Q ss_pred hhcCCCCCc-eEEEecC
Q 027969 134 ALEVPKASG-RYLLAGS 149 (216)
Q Consensus 134 ~~~~~~~~~-~~~~~~~ 149 (216)
+++.+...| .+.+.|+
T Consensus 235 l~s~~~itG~~i~vdGG 251 (257)
T 3tl3_A 235 IIENPMLNGEVIRLDGA 251 (257)
T ss_dssp HHHCTTCCSCEEEESTT
T ss_pred HhcCCCCCCCEEEECCC
Confidence 998766666 4555543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.5e-05 Score=58.13 Aligned_cols=127 Identities=17% Similarity=0.055 Sum_probs=75.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..++|++||.++...... . +...|+.||...+.+.+.++.+
T Consensus 140 g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~--------------~------~~~~Y~asKaa~~~l~~~la~e~ 198 (283)
T 3v8b_A 140 GTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTT--------------P------GATAYTATKAAQVAIVQQLALEL 198 (283)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCCS--------------T------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCCC--------------C------CchHHHHHHHHHHHHHHHHHHHh
Confidence 456666666 444 4578999999733221100 0 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-................... ...+ ....+...+|+|+++..++... ...| .+.+.|+
T Consensus 199 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 199 GKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp TTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 379999999999987654332111110000000000 1112 2244788999999999998643 2345 4555543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.2e-05 Score=60.09 Aligned_cols=115 Identities=19% Similarity=0.065 Sum_probs=71.1
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCC------CCccccCCCCCC-------------cccccccchhHHH
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMT------PDVVIDETWFSN-------------PVLCKENKEWYSL 61 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~------~~~~~~E~~~~~-------------~~~~~~~~~~Y~~ 61 (216)
|+.++++++... ....+||++||.++.++.....+ ...+++|+++.. ......+.+.|+.
T Consensus 116 g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 195 (276)
T 1wma_A 116 GTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGV 195 (276)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHH
T ss_pred eHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHH
Confidence 677888888775 11248999999844443110000 001122221000 0000011245999
Q ss_pred HHHHHHHHHHHHHHH-------cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 62 AKTLAEEAAWKFAKE-------NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 62 sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
||...|.+++.++++ .++++.+++|+.|.++-... ..+.+.+|+|++++.+
T Consensus 196 sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~l 253 (276)
T 1wma_A 196 TKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----------------------KATKSPEEGAETPVYL 253 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----------------------TCSBCHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc----------------------cccCChhHhhhhHhhh
Confidence 999999999887765 48999999999997654221 1357899999999999
Q ss_pred hcCC
Q 027969 135 LEVP 138 (216)
Q Consensus 135 ~~~~ 138 (216)
+..+
T Consensus 254 ~~~~ 257 (276)
T 1wma_A 254 ALLP 257 (276)
T ss_dssp HSCC
T ss_pred hcCc
Confidence 9744
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.12 E-value=1e-05 Score=62.31 Aligned_cols=115 Identities=15% Similarity=0.089 Sum_probs=75.0
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||.++..+... ...|+.||...+.+.+.++.+ .|+++.+++|+ +..+-
T Consensus 172 g~IV~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~ 228 (322)
T 3qlj_A 172 GRIINTSSGAGLQGSVG----------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM 228 (322)
T ss_dssp EEEEEECCHHHHHCBTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCC
T ss_pred cEEEEEcCHHHccCCCC----------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCcc
Confidence 48999999844443211 134999999999999998876 48999999999 64433
Q ss_pred CCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC------------------CC
Q 027969 94 FQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS------------------VA 151 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~------------------~~ 151 (216)
....... . ...+ ....++..+|+|+++..++.... ..| .+++.|+ ..
T Consensus 229 ~~~~~~~---~--------~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~ 297 (322)
T 3qlj_A 229 TETVFAE---M--------MATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARW 297 (322)
T ss_dssp SCCSCCC-------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCC
T ss_pred chhhhhh---h--------hhccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCC
Confidence 2211100 0 0011 33456789999999999986432 234 4555432 23
Q ss_pred CHHHHHHHHHHhCC
Q 027969 152 QHSDILKFLREHYP 165 (216)
Q Consensus 152 s~~el~~~i~~~~~ 165 (216)
++.|+++.+.+.++
T Consensus 298 ~~~el~~~~~~~~~ 311 (322)
T 3qlj_A 298 DPAELGPVVADLLG 311 (322)
T ss_dssp CGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh
Confidence 77999999988875
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.9e-05 Score=58.22 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=75.0
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++... ..-.++|++||. ..+.... ....|+.||...+.+.+.++.+ .
T Consensus 104 g~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 161 (244)
T 4e4y_A 104 SSIYFIKGLENNLKVGASIVFNGSD-QCFIAKP---------------------NSFAYTLSKGAIAQMTKSLALDLAKY 161 (244)
T ss_dssp HHHHHHHHTGGGEEEEEEEEEECCG-GGTCCCT---------------------TBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhccCcEEEEECCH-HHccCCC---------------------CCchhHHHHHHHHHHHHHHHHHHHHc
Confidence 567788887764 111489999997 4442111 0134999999999999988863 4
Q ss_pred CCcEEEEcCCCccCCCCCCCCCc--------cHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEE
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLL 146 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~ 146 (216)
|+++.+++|+.|..+........ ........... . ....+.+.+|+|+++..++.... ..| .+++
T Consensus 162 gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~v 237 (244)
T 4e4y_A 162 QIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE---F-PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPI 237 (244)
T ss_dssp TCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT---S-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred CeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc---C-CCCCCcCHHHHHHHHHHHhcCccccccCCeEeE
Confidence 89999999999976532110000 00011111111 1 22347889999999999997532 234 5555
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 238 dGG 240 (244)
T 4e4y_A 238 DGG 240 (244)
T ss_dssp STT
T ss_pred CCC
Confidence 543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.11 E-value=2.4e-05 Score=58.46 Aligned_cols=121 Identities=14% Similarity=0.056 Sum_probs=73.3
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. . +..+||++||. ..+.... +...|+.||...|.+.+.++.+.
T Consensus 108 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~ 164 (264)
T 2dtx_A 108 GYYYASKFAIPYMIRS-RDPSIVNISSV-QASIITK---------------------NASAYVTSKHAVIGLTKSIALDY 164 (264)
T ss_dssp HHHHHHHHHHHHHTTS-SSCEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECCc-hhccCCC---------------------CchhHHHHHHHHHHHHHHHHHHh
Confidence 44555665543 3 55799999997 4442110 11349999999999999988765
Q ss_pred C--CcEEEEcCCCccCCCCCCCC----CccH----HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eE
Q 027969 78 G--IDLVAIHPGTVIGPFFQPIL----NFGA----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RY 144 (216)
Q Consensus 78 ~--~~~~ilR~~~v~G~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~ 144 (216)
+ +++.+++|+.+.++-..... .... ......... .+ ...+++.+|+|+++..++... ...| .+
T Consensus 165 ~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i 240 (264)
T 2dtx_A 165 APLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE---HP-MQRIGKPQEVASAVAFLASREASFITGTCL 240 (264)
T ss_dssp TTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH---ST-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred cCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCCCcEE
Confidence 4 89999999999764311000 0000 111111111 11 234889999999999998653 2334 55
Q ss_pred EEecC
Q 027969 145 LLAGS 149 (216)
Q Consensus 145 ~~~~~ 149 (216)
.+.|+
T Consensus 241 ~vdGG 245 (264)
T 2dtx_A 241 YVDGG 245 (264)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 55543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=4.3e-05 Score=58.06 Aligned_cols=121 Identities=14% Similarity=-0.016 Sum_probs=77.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..-.++|++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 146 g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~ 203 (296)
T 3k31_A 146 SFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH----------------------YNVMGVCKAALEASVKYLAVDLGKQ 203 (296)
T ss_dssp HHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT----------------------TTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC----------------------chhhHHHHHHHHHHHHHHHHHHhhc
Confidence 567788888764 12358999999833332110 1349999999999999887654
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+..... .............. + ...+...+|+|++++.++... ...| .+++.|+
T Consensus 204 gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~---p-~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 273 (296)
T 3k31_A 204 QIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNS---P-LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273 (296)
T ss_dssp TEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcC---C-CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence 89999999999988754321 01112222222221 1 223677899999999999752 3344 5666544
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.10 E-value=5.1e-05 Score=56.74 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=73.5
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||. .+. .. +. . +...|+.||...|.+.+.++.+
T Consensus 133 g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~-~~-------~~------~------~~~~Y~asK~a~~~~~~~la~e~ 190 (267)
T 1vl8_A 133 GTYYVCREAFSLLRES-DNPSIINIGSL-TVE-EV-------TM------P------NISAYAASKGGVASLTKALAKEW 190 (267)
T ss_dssp HHHHHHHHHHHHHTTC-SSCEEEEECCG-GGT-CC-------CS------S------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECCc-chh-cc-------CC------C------CChhHHHHHHHHHHHHHHHHHHh
Confidence 455565655 344 56799999997 421 00 00 0 1134999999999999988765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-..... ............ .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 191 ~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~---~p-~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 191 GRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKR---IP-LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp GGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHT---CT-TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cccCeEEEEEEeccCccccccccc-cChHHHHHHHhh---CC-CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence 4899999999999775421100 001122222222 11 224789999999999998653 2344 4555443
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.09 E-value=2e-05 Score=59.07 Aligned_cols=120 Identities=18% Similarity=0.146 Sum_probs=74.7
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||.++..+... ...|+.||...+.+.+.++.+
T Consensus 137 g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 193 (271)
T 4ibo_A 137 SAFMIGREAAKRMIPR-GYGKIVNIGSLTSELARAT----------------------VAPYTVAKGGIKMLTRAMAAEW 193 (271)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEccHHhCCCCCC----------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 4555555543 33 4468999999844332211 134999999999999998775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-..... ....+...+.... ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 194 ~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 266 (271)
T 4ibo_A 194 AQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKART----PAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG 266 (271)
T ss_dssp GGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHS----TTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence 4899999999999876432100 0012222222221 1234678999999999988643 2334 5666543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.5e-05 Score=58.59 Aligned_cols=118 Identities=18% Similarity=0.107 Sum_probs=75.0
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +-.+||++||.++..+... ...|+.||...+.+.+.++.+
T Consensus 139 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 195 (270)
T 3ftp_A 139 AVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGNPG----------------------QVNYAAAKAGVAGMTRALAREI 195 (270)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCCC----------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 4566666654 33 3368999999844443211 134999999999999888775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-... ............. ....+.+.+|+|+++..++... ...| .+++.|+
T Consensus 196 ~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 266 (270)
T 3ftp_A 196 GSRGITVNCVAPGFIDTDMTKG---LPQEQQTALKTQI----PLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266 (270)
T ss_dssp GGGTEEEEEEEECSBCSHHHHH---SCHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhCeEEEEEEeCCCcCcchhh---cCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence 48999999999997653211 1112222222221 2234788999999999998543 2344 5666643
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.3e-05 Score=59.14 Aligned_cols=125 Identities=18% Similarity=0.076 Sum_probs=76.3
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++.+. .+..++|++||.++..+.. . +...|+.||...|.+.+.++.+ .
T Consensus 141 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~------~~~~Y~asK~a~~~~~~~la~e~~~~ 199 (283)
T 1g0o_A 141 GQFFVAREAYKHLEIGGRLILMGSITGQAKAV---------------P------KHAVYSGSKGAIETFARCMAIDMADK 199 (283)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC---------------S------SCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCeEEEEechhhccCCC---------------C------CCcchHHHHHHHHHHHHHHHHHhccc
Confidence 567788887764 2346899999973322110 0 1144999999999999988764 3
Q ss_pred CCcEEEEcCCCccCCCCCC-------CC-CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEE
Q 027969 78 GIDLVAIHPGTVIGPFFQP-------IL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLL 146 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~ 146 (216)
|+++.+++|+.|.++.... .. .........+.... ..+ ...+.+.+|+|+++..++... ...| .+.+
T Consensus 200 gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~v 277 (283)
T 1g0o_A 200 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-WSP-LRRVGLPIDIARVVCFLASNDGGWVTGKVIGI 277 (283)
T ss_dssp TCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-SCT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred CeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-CCC-CCCCcCHHHHHHHHHHHhCccccCcCCCEEEe
Confidence 8999999999998763110 00 00112222222200 112 123788999999999999753 2344 4555
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 278 dgG 280 (283)
T 1g0o_A 278 DGG 280 (283)
T ss_dssp STT
T ss_pred CCC
Confidence 543
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=6.5e-07 Score=69.14 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=56.2
Q ss_pred cHHHHHHHHhccCCcc-EEEEcccccccccCCCCCCCCcccc-CCC-CCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMTPDVVID-ETW-FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~-~~i~~Ss~~~vy~~~~~~~~~~~~~-E~~-~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
+|+++++++++..+.+ +||+.|+...+. .++. |.. ... +.++|+.||+.+|+++..+++..|
T Consensus 108 ~t~~l~~a~~~~~~~~~~vvv~snp~~~~---------~~~~~~~~~~~~------p~~~yg~tkl~~er~~~~~a~~~g 172 (327)
T 1y7t_A 108 IFTEQGRALAEVAKKDVKVLVVGNPANTN---------ALIAYKNAPGLN------PRNFTAMTRLDHNRAKAQLAKKTG 172 (327)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSSHHHH---------HHHHHHTCTTSC------GGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCCeEEEEeCCchhhh---------HHHHHHHcCCCC------hhheeccchHHHHHHHHHHHHHhC
Confidence 6899999999872133 677777641111 1222 211 111 224599999999999999988889
Q ss_pred CcEEEEcCCCccCCCCC
Q 027969 79 IDLVAIHPGTVIGPFFQ 95 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~ 95 (216)
++.+++|+++|||++..
T Consensus 173 ~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 173 TGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp CCGGGEECCEEEBCSST
T ss_pred cChhheeeeEEEcCCCC
Confidence 99999999999998764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.4e-05 Score=57.75 Aligned_cols=121 Identities=14% Similarity=0.044 Sum_probs=75.3
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. . +..+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 115 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~ 171 (269)
T 3vtz_A 115 GSYLMAKYTIPVMLAI-GHGSIINIASV-QSYAATK---------------------NAAAYVTSKHALLGLTRSVAIDY 171 (269)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSBCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECch-hhccCCC---------------------CChhHHHHHHHHHHHHHHHHHHh
Confidence 45555565443 4 45689999998 5442211 11349999999999999988775
Q ss_pred --CCcEEEEcCCCccCCCCCC--------CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eE
Q 027969 78 --GIDLVAIHPGTVIGPFFQP--------ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RY 144 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~ 144 (216)
++++.+++|+.|.++.... ................ ....+.+.+|+|+++..++... ...| .+
T Consensus 172 ~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i 247 (269)
T 3vtz_A 172 APKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH----PMGRIGRPEEVAEVVAFLASDRSSFITGACL 247 (269)
T ss_dssp TTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred cCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCCccCCCcCcEE
Confidence 7999999999998754210 0000011112221111 2234788999999999998653 2334 56
Q ss_pred EEecC
Q 027969 145 LLAGS 149 (216)
Q Consensus 145 ~~~~~ 149 (216)
++.|+
T Consensus 248 ~vdGG 252 (269)
T 3vtz_A 248 TVDGG 252 (269)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 66654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.8e-05 Score=56.95 Aligned_cols=109 Identities=17% Similarity=0.086 Sum_probs=68.4
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. + .++|++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 113 g~~~~~~~~~~~m~~~-~-g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~ 168 (254)
T 3kzv_A 113 SIVSLVGIALPELKKT-N-GNVVFVSSD-ACNMYFS---------------------SWGAYGSSKAALNHFAMTLANEE 168 (254)
T ss_dssp HHHHHHHHHHHHHHHH-T-CEEEEECCS-CCCCSSC---------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc-C-CeEEEEcCc-hhccCCC---------------------CcchHHHHHHHHHHHHHHHHhhc
Confidence 455666666 444 4 689999998 3331110 11349999999999999988775
Q ss_pred -CCcEEEEcCCCccCCCCCCCCC------ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILN------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++++.+++|+.|..+-...... ........+.... ....+.+.+|+|+++..++...
T Consensus 169 ~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~p~dva~~v~~L~s~~ 232 (254)
T 3kzv_A 169 RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK----ENNQLLDSSVPATVYAKLALHG 232 (254)
T ss_dssp TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH----TTC----CHHHHHHHHHHHHHC
T ss_pred cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH----hcCCcCCcccHHHHHHHHHhhc
Confidence 8999999999998875432111 0122222222111 1234788999999999998654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.05 E-value=7.9e-05 Score=55.67 Aligned_cols=121 Identities=13% Similarity=0.153 Sum_probs=72.3
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+.+. +..++|++||.++..+.. ....|+.||...+.+.+.++.+. |+++
T Consensus 126 ~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 182 (267)
T 3t4x_A 126 SYLKKMIER-KEGRVIFIASEAAIMPSQ----------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTV 182 (267)
T ss_dssp HHHHHHHHT-TEEEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHhC-CCCEEEEEcchhhccCCC----------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 334444445 557999999983332211 11349999999999999988764 6899
Q ss_pred EEEcCCCccCCCCCC-------CCCc-cHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQP-------ILNF-GAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~-------~~~~-~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.+++|+.+..+.... .... ............ +.. ....+.+.+|+|+++.+++... ...| .+++.|+
T Consensus 183 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 183 NTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTS-IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp EEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTC-SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcc-cccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 999999997652110 0000 111111111111 111 1235889999999999998743 2344 5666643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.05 E-value=2.5e-05 Score=58.71 Aligned_cols=109 Identities=18% Similarity=0.142 Sum_probs=69.1
Q ss_pred HHHHHHHHhccCCc--cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 3 TLNVLRSCAKVHSI--KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 3 t~~ll~~~~~~~~~--~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
+++++..+++. ++ .+||++||. ..+.... .. +...|+.||...|.+++.++++
T Consensus 150 ~~~~l~~~~~~-~~~~g~iv~isS~-~~~~~~~-------------~~------~~~~Y~~sK~a~~~~~~~la~e~~~~ 208 (279)
T 1xg5_A 150 TREAYQSMKER-NVDDGHIININSM-SGHRVLP-------------LS------VTHFYSATKYAVTALTEGLRQELREA 208 (279)
T ss_dssp HHHHHHHHHHT-TCCSCEEEEECCG-GGTSCCS-------------CG------GGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCCceEEEEcCh-hhcccCC-------------CC------CCchhHHHHHHHHHHHHHHHHHHhhc
Confidence 56777888776 54 699999997 5542110 00 1144999999999988877654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
.++++.+++|+.|.++............+.... ....+++.+|+|++++.++..+.
T Consensus 209 ~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 209 QTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-------EQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp TCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-------C---CBCHHHHHHHHHHHHHSCT
T ss_pred CCCeEEEEEecCcccchhhhhhcccChhHHhhhc-------ccccCCCHHHHHHHHHHHhcCCc
Confidence 379999999999977541100000111111100 12347899999999999997643
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=2.8e-05 Score=57.75 Aligned_cols=108 Identities=18% Similarity=0.114 Sum_probs=66.6
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
..++|++||.++.++... ...|+.||...+.+.+.++.+ .|+++.+++|+.|.++
T Consensus 131 ~g~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 131 GGKIINACSQAGHVGNPE----------------------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp CEEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred CCEEEEECchhhcCCCCC----------------------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 468999999844443210 134999999999999888765 4899999999999875
Q ss_pred CCCCCCC--------ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 93 FFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
....... ........+... .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 252 (256)
T 1geg_A 189 MWAEIDRQVSEAAGKPLGYGTAEFAKR---IT-LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252 (256)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHTT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred hhhhhhhhccccccCChHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 3210000 000001111111 12 124789999999999998653 2344 4555543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.8e-05 Score=57.85 Aligned_cols=122 Identities=18% Similarity=0.052 Sum_probs=72.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccc-cCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAML-LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-- 77 (216)
|+.++++++... ..-.++|++||. ..+ .... ....|+.||...+.+.+.++.+.
T Consensus 121 g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~ 178 (259)
T 3edm_A 121 SLFLTAKTALPKMAKGGAIVTFSSQ-AGRDGGGP---------------------GALAYATSKGAVMTFTRGLAKEVGP 178 (259)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEECCH-HHHHCCST---------------------TCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCH-HhccCCCC---------------------CcHHHHHHHHHHHHHHHHHHHHHCC
Confidence 567788888764 112489999997 443 2110 11349999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecCCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGSVA 151 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~~ 151 (216)
++++.+++|+.|..+-..... .......... .. ....+.+.+|+|+++..++.... ..| .+++.|+..
T Consensus 179 ~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~---~~-p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~ 249 (259)
T 3edm_A 179 KIRVNAVCPGMISTTFHDTFT--KPEVRERVAG---AT-SLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVL 249 (259)
T ss_dssp TCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred CCEEEEEEECCCcCccccccc--ChHHHHHHHh---cC-CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence 389999999999775432110 0011111100 01 22347789999999999986532 234 667766544
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.9e-05 Score=57.19 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=73.8
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||. ..+.... +...|+.||...+.+.+.++.+.
T Consensus 135 g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~ 191 (277)
T 4dqx_A 135 GIFLCSKYVIPVMRRN-GGGSIINTTSY-TATSAIA---------------------DRTAYVASKGAISSLTRAMAMDH 191 (277)
T ss_dssp HHHHHHHHHHHHHTTT-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECch-hhCcCCC---------------------CChhHHHHHHHHHHHHHHHHHHh
Confidence 445555555 444 45689999997 4442111 11349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCC---CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 148 (216)
|+++.+++|+.|..+.... ................ ....+.+.+|+|++++.++.... ..| .+++.|
T Consensus 192 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 267 (277)
T 4dqx_A 192 AKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA----VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG 267 (277)
T ss_dssp GGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred hhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC----cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence 8999999999997653100 0001111111121111 12347789999999999986532 234 566654
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 268 G 268 (277)
T 4dqx_A 268 G 268 (277)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.6e-05 Score=58.01 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccH-HHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGA-EVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
..|+.||...+.+.+.++.+ .++++.+++|+.+..+-......... .....+... . ....+++.+|+|+++.
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dva~~~~ 233 (261)
T 3n74_A 158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS---I-PMGRLLKPDDLAEAAA 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------C-TTSSCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc---C-CcCCCcCHHHHHHHHH
Confidence 34999999999999998876 48999999999998765432110000 000001000 1 2335889999999999
Q ss_pred HhhcCC--CCCc-eEEEecC
Q 027969 133 RALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 133 ~~~~~~--~~~~-~~~~~~~ 149 (216)
.++... ...| .+++.|+
T Consensus 234 ~l~s~~~~~itG~~i~vdgG 253 (261)
T 3n74_A 234 FLCSPQASMITGVALDVDGG 253 (261)
T ss_dssp HHTSGGGTTCCSCEEEESTT
T ss_pred HHcCCcccCcCCcEEEecCC
Confidence 998643 2344 5666543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=7.2e-05 Score=56.73 Aligned_cols=121 Identities=16% Similarity=-0.007 Sum_probs=74.7
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++... .+-.++|++||.++..+... ...|+.||...+.+.+.++.+ .
T Consensus 147 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~ 204 (293)
T 3grk_A 147 SLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN----------------------YNVMGVAKAALEASVKYLAVDLGPQ 204 (293)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT----------------------TTHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhccCCCEEEEEeehhhccCCCc----------------------hHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 566777777653 12358999999833332110 134999999999999988765 3
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+-..... ............. ....+...+|+|+++..++... ...| .+++.|+
T Consensus 205 gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 205 NIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNA----PLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp TEEEEEEEECCCCC------C-CHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCEEEEEecCCCcchhhhccc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence 899999999999886543211 1122222222221 1223678999999999998743 2344 5566544
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=1.3e-05 Score=60.89 Aligned_cols=136 Identities=13% Similarity=0.105 Sum_probs=79.0
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+ .+||++||. ..+.... + ....|+.||...+.+.+.++.+
T Consensus 142 g~~~l~~~~~~~~~~~~-g~IV~isS~-~~~~~~~------------~--------~~~~Y~asKaa~~~l~~~la~el~ 199 (297)
T 1xhl_A 142 AVIEMTQKTKEHLIKTK-GEIVNVSSI-VAGPQAH------------S--------GYPYYACAKAALDQYTRCTAIDLI 199 (297)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEEEECCG-GGSSSCC------------T--------TSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhcC-CEEEEEcCc-hhccCCC------------C--------CcchHHHHHHHHHHHHHHHHHHhc
Confidence 445666665442 14 689999997 4442110 0 1134999999999999888754
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccH-H-HHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCC---CCCc-eEEEec
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGA-E-VILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP---KASG-RYLLAG 148 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~~~~ 148 (216)
.|+++.+++|+.|.++.......... . -........ ...+ ...+.+.+|+|+++..++... ...| .+.+.|
T Consensus 200 ~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdG 278 (297)
T 1xhl_A 200 QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG 278 (297)
T ss_dssp GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECC
Confidence 48999999999998864221100000 0 000111111 1122 224789999999999998643 3344 566654
Q ss_pred C-CCCHHHHHHHH
Q 027969 149 S-VAQHSDILKFL 160 (216)
Q Consensus 149 ~-~~s~~el~~~i 160 (216)
+ .+...+.+..+
T Consensus 279 G~~~~~~~~~~~~ 291 (297)
T 1xhl_A 279 GSTLVMGMQTHDL 291 (297)
T ss_dssp TGGGCCGGGGSCH
T ss_pred Cccccccccccch
Confidence 3 44544443333
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00017 Score=53.09 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=74.5
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..++|++||. ..++... ...|+.||...+.+.+.++.+
T Consensus 111 g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~~----------------------~~~Y~asK~a~~~~~~~la~e~~ 167 (245)
T 1uls_A 111 GSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLG----------------------QANYAASMAGVVGLTRTLALELG 167 (245)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEccc-hhcCCCC----------------------chhHHHHHHHHHHHHHHHHHHHh
Confidence 445555555431 156799999998 4443211 134999999999988887764
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-... ............ .+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 168 ~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~---~p-~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 237 (245)
T 1uls_A 168 RWGIRVNTLAPGFIETRMTAK---VPEKVREKAIAA---TP-LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237 (245)
T ss_dssp GGTEEEEEEEECSBCCTTTSS---SCHHHHHHHHHT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhCeEEEEEEeCcCcCcchhh---cCHHHHHHHHhh---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 38999999999997765321 112222222222 12 123789999999999998753 2334 4555544
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=61.48 Aligned_cols=110 Identities=20% Similarity=0.185 Sum_probs=66.1
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +.+...+||++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 142 g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~ 199 (301)
T 3tjr_A 142 GSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA----------------------GLGTYGVAKYGVVGLAETLAREV 199 (301)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC----------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 4566666653 332246899999984433221 11349999999999998887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcC---C--CCCC---CCCceeehhhhHHHHHHhhcCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLING---D--QSFA---FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~---~--~~~~---~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+++.+++|+.|..+-... . ........+ . ..+. ....+++++|+|++++.+++.+
T Consensus 200 ~~~gi~v~~v~PG~v~T~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 200 KPNGIGVSVLCPMVVETKLVSN----S-ERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp GGGTEEEEEECCSCCCSSHHHH----H-HHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred cccCcEEEEEECCccccccccc----c-ccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 8999999999997543210 0 000000000 0 1111 2335899999999999999864
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-05 Score=64.70 Aligned_cols=121 Identities=16% Similarity=0.105 Sum_probs=80.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+|++++.+. +.++||++||.++++|... ...|+.+|...+.+..+.. ..|+++
T Consensus 340 g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g----------------------~~~Yaaaka~l~~la~~~~-~~gi~v 395 (486)
T 2fr1_A 340 GARNLHELTREL-DLTAFVLFSSFASAFGAPG----------------------LGGYAPGNAYLDGLAQQRR-SDGLPA 395 (486)
T ss_dssp HHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT----------------------CTTTHHHHHHHHHHHHHHH-HTTCCC
T ss_pred HHHHHHHHhCcC-CCCEEEEEcChHhcCCCCC----------------------CHHHHHHHHHHHHHHHHHH-hcCCeE
Confidence 688999999887 7789999999867775432 0239999999999887664 449999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFL 160 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i 160 (216)
++++|+.+.+.+.... ... ..+. ....+++.+|+++++..++..+.. .+++. .+.+..+...+
T Consensus 396 ~~i~pG~~~~~gm~~~------~~~------~~~~~~g~~~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~ 459 (486)
T 2fr1_A 396 TAVAWGTWAGSGMAEG------PVA------DRFRRHGVIEMPPETACRALQNALDRAEV--CPIVI--DVRWDRFLLAY 459 (486)
T ss_dssp EEEEECCBC------------------------CTTTTEECBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHHHHHHH
T ss_pred EEEECCeeCCCcccch------hHH------HHHHhcCCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhh
Confidence 9999999987653210 000 1112 345689999999999999986532 22222 24577766655
Q ss_pred HH
Q 027969 161 RE 162 (216)
Q Consensus 161 ~~ 162 (216)
..
T Consensus 460 ~~ 461 (486)
T 2fr1_A 460 TA 461 (486)
T ss_dssp TS
T ss_pred cc
Confidence 43
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.02 E-value=2e-05 Score=59.37 Aligned_cols=122 Identities=13% Similarity=0.102 Sum_probs=74.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+ .+||++||. ..+.... . +...|+.||...+.+.+.++.+
T Consensus 124 g~~~~~~~~~~~~~~~~-g~iv~isS~-~~~~~~~--------------~------~~~~Y~asK~a~~~~~~~la~e~~ 181 (280)
T 1xkq_A 124 AVIEMTKKVKPHLVASK-GEIVNVSSI-VAGPQAQ--------------P------DFLYYAIAKAALDQYTRSTAIDLA 181 (280)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEECCG-GGSSSCC--------------C------SSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCC-CcEEEecCc-cccCCCC--------------C------cccHHHHHHHHHHHHHHHHHHHhc
Confidence 455666666542 14 689999997 4442210 0 1134999999999999888754
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCcc------HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC---CCCc-eEE
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFG------AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP---KASG-RYL 145 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~ 145 (216)
.|+++.+++|+.|.++......... ........ ...+ ...+.+.+|+|+++..++... ...| .++
T Consensus 182 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~p-~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~ 257 (280)
T 1xkq_A 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK---ECIP-IGAAGKPEHIANIILFLADRNLSFYILGQSIV 257 (280)
T ss_dssp TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT---TTCT-TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEE
T ss_pred cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH---cCCC-CCCCCCHHHHHHHHHHhcCcccccCccCCeEE
Confidence 4899999999999887532110000 01111111 1122 224789999999999998643 2344 556
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 258 vdgG 261 (280)
T 1xkq_A 258 ADGG 261 (280)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 6544
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.02 E-value=6.4e-05 Score=56.61 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=61.2
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
..+||++||.++.++... ...|+.||...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 163 ~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 220 (280)
T 4da9_A 163 SRSIINITSVSAVMTSPE----------------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSD 220 (280)
T ss_dssp CEEEEEECCC-------C----------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred CCEEEEEcchhhccCCCC----------------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCC
Confidence 458999999844432211 134999999999999998876 4899999999999876
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
..... ..........+ .. ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 221 ~~~~~---~~~~~~~~~~~--~~-p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (280)
T 4da9_A 221 MTAAV---SGKYDGLIESG--LV-PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274 (280)
T ss_dssp ---------------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred chhhc---chhHHHHHhhc--CC-CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 53321 00111111110 11 12246789999999999997543 334 5666544
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.01 E-value=4.6e-05 Score=57.17 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=57.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||.++..+.. +...|+.||...+.+.+.++.+ .++++.+++|+.|..+-
T Consensus 157 g~IV~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (272)
T 4dyv_A 157 GRIINNGSISATSPRP----------------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214 (272)
T ss_dssp EEEEEECCSSTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred cEEEEECchhhcCCCC----------------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence 5899999983333211 1134999999999999988765 48999999999997654
Q ss_pred CCCCCCccHHHHHHHHcCC-CCCC--CCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 94 FQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
... ...+. .... ....+.+++|+|++++.++..+....
T Consensus 215 ~~~-----------~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~ 255 (272)
T 4dyv_A 215 AQK-----------MKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDAN 255 (272)
T ss_dssp --------------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred hhh-----------hcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence 221 11111 0001 22347899999999999998765544
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.00 E-value=8.8e-05 Score=55.77 Aligned_cols=117 Identities=17% Similarity=0.132 Sum_probs=72.5
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . +..+||++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 137 g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 193 (277)
T 3gvc_A 137 GAWLCTKHAAPRMIER-GGGAIVNLSSLAGQVAVG----------------------GTGAYGMSKAGIIQLSRITAAEL 193 (277)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCCC----------------------CchhHHHHHHHHHHHHHHHHHHh
Confidence 45555665543 4 446899999983333211 1134999999999999988765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCC--------ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-e
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-R 143 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 143 (216)
.|+++.+++|+.|.++....... ......... ....+.+.+|+|+++..++... ...| .
T Consensus 194 ~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~r~~~pedvA~~v~~L~s~~a~~itG~~ 265 (277)
T 3gvc_A 194 RSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR--------LQGRMAAPEEMAGIVVFLLSDDASMITGTT 265 (277)
T ss_dssp GGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHH--------HHSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred cccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhc--------cccCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence 48999999999998753210000 000000000 1123788999999999999643 2344 5
Q ss_pred EEEecC
Q 027969 144 YLLAGS 149 (216)
Q Consensus 144 ~~~~~~ 149 (216)
+++.|+
T Consensus 266 i~vdGG 271 (277)
T 3gvc_A 266 QIADGG 271 (277)
T ss_dssp EEESTT
T ss_pred EEECCc
Confidence 666543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.99 E-value=5.8e-05 Score=56.73 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=66.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.+||++||. ..+.... . .. ..|+.||...|.+.+.++.+ .|+++.+++|+.|..+-
T Consensus 161 g~iV~isS~-~~~~~~~----~---------~~-------~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 161 ARVINIGSV-AGISAMG----E---------QA-------YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp EEEEEECCG-GGTCCCC----C---------SC-------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred CEEEEECCH-HHcCCCC----C---------Cc-------cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 799999998 4442211 0 00 13999999999999988765 38999999999998764
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
... ............ ...+ ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 220 ~~~---~~~~~~~~~~~~-~~~p-~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 273 (276)
T 2b4q_A 220 TRH---IANDPQALEADS-ASIP-MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273 (276)
T ss_dssp THH---HHHCHHHHHHHH-HTST-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhh---cchhHHHHHHhh-cCCC-CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 211 000011111110 0112 224789999999999998653 2334 4555543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.99 E-value=8.2e-05 Score=55.62 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=73.4
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++..+... ...|+.||...+.+++.++++.
T Consensus 137 ~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~ 193 (269)
T 3gk3_A 137 AMFNVTKQFIAGMVER-RFGRIVNIGSVNGSRGAFG----------------------QANYASAKAGIHGFTKTLALET 193 (269)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEeCChhhccCCCC----------------------cchHHHHHHHHHHHHHHHHHHh
Confidence 4455566553 34 4468999999844432211 1349999999999998887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC--CCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA--FPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+..... .. ...... ... ....+.+.+|+|+++..++.... ..| .+++.|+
T Consensus 194 ~~~gi~v~~v~PG~v~T~~~~~~---~~----~~~~~~-~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 265 (269)
T 3gk3_A 194 AKRGITVNTVSPGYLATAMVEAV---PQ----DVLEAK-ILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265 (269)
T ss_dssp GGGTEEEEEEEECSBCCTTTTC--------------CC-SGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred hhcCCEEEEEecCcccchhhhhh---ch----hHHHHH-hhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence 89999999999987654321 00 111101 111 23347789999999999987543 334 5666543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=4.1e-05 Score=57.35 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=76.4
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+.++++++... .+..++|++||.++.++... ...|+.||...+.+.+.++.+
T Consensus 117 g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~ 174 (270)
T 1yde_A 117 GTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ----------------------AVPYVATKGAVTAMTKALALDESP 174 (270)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC----------------------CcccHHHHHHHHHHHHHHHHHhhh
Confidence 456667766531 12368999999845553211 134999999999999988764
Q ss_pred cCCcEEEEcCCCccCCCCCC---CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC-CCCCc-eEEEec-CC
Q 027969 77 NGIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-PKASG-RYLLAG-SV 150 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~-~~ 150 (216)
.|+++.++||+.|+++.... ........+...... .+ ...+...+|+|+++..++.. ....| .+.+.| ..
T Consensus 175 ~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~ 250 (270)
T 1yde_A 175 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA---QP-LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 250 (270)
T ss_dssp GTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT---ST-TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred hCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhc---CC-CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCee
Confidence 48999999999999864210 000111111111111 12 12367899999999998864 22344 555554 44
Q ss_pred CCHHHH
Q 027969 151 AQHSDI 156 (216)
Q Consensus 151 ~s~~el 156 (216)
+.....
T Consensus 251 ~~~~~~ 256 (270)
T 1yde_A 251 LGYGCK 256 (270)
T ss_dssp SCC---
T ss_pred cccCcC
Confidence 544433
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00018 Score=55.22 Aligned_cols=123 Identities=20% Similarity=0.166 Sum_probs=74.6
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. .+.-.+||++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 169 g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 226 (317)
T 3oec_A 169 GAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP----------------------GQSHYAASKHGVQGLMLSLANEV 226 (317)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC----------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence 45566666533 22235799999983333221 01349999999999999988763
Q ss_pred ---CCcEEEEcCCCccCCCCCCC----------CCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC--CCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPI----------LNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP--KAS 141 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~~ 141 (216)
|+++.+++|+.|.++..... .............. .. ....+++.+|+|+++.+++... ...
T Consensus 227 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~pedvA~av~fL~s~~a~~it 303 (317)
T 3oec_A 227 GRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ---LTLLPIPWVEPEDVSNAVAWLASDEARYIH 303 (317)
T ss_dssp GGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT---TCSSSSSSBCHHHHHHHHHHHTSGGGTTCC
T ss_pred hhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh---hccCCCCCCCHHHHHHHHHHHcCCcccCCC
Confidence 89999999999987642110 00000001111111 11 2256889999999999998643 233
Q ss_pred c-eEEEecC
Q 027969 142 G-RYLLAGS 149 (216)
Q Consensus 142 ~-~~~~~~~ 149 (216)
| .+++.|+
T Consensus 304 G~~i~vdGG 312 (317)
T 3oec_A 304 GAAIPVDGG 312 (317)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECcc
Confidence 4 5666543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.98 E-value=9.9e-06 Score=60.76 Aligned_cols=93 Identities=18% Similarity=0.083 Sum_probs=64.3
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc------CC
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN------GI 79 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~ 79 (216)
++..+.+. +..+||++||. ..+... + +...|+.||...|.+++.++.+. ++
T Consensus 150 ~~~~~~~~-~~~~iv~isS~-~~~~~~----------------~-----~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi 206 (272)
T 1yb1_A 150 FLPAMTKN-NHGHIVTVASA-AGHVSV----------------P-----FLLAYCSSKFAAVGFHKTLTDELAALQITGV 206 (272)
T ss_dssp HHHHHHHT-TCEEEEEECCC-C-CCCH----------------H-----HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred HHHHHHhc-CCCEEEEEech-hhcCCC----------------C-----CchhHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 33333444 56799999998 444210 0 11349999999999999887653 79
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++.++||+.|.++.... . . . ....+++.+|+|++++.++..+
T Consensus 207 ~v~~v~Pg~v~t~~~~~---~----~--~--------~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 207 KTTCLCPNFVNTGFIKN---P----S--T--------SLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp EEEEEEETHHHHCSTTC---T----H--H--------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcccCCcccc---c----c--c--------cccCCCCHHHHHHHHHHHHHcC
Confidence 99999999998765321 0 0 0 1123688999999999999764
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.97 E-value=6.2e-05 Score=56.21 Aligned_cols=121 Identities=17% Similarity=0.079 Sum_probs=73.9
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. .+.-.++|++||. ..+.... ....|+.||...+.+.+.++.+
T Consensus 132 g~~~l~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~l~~~la~e~ 189 (266)
T 4egf_A 132 APALLASAVGKAMVAAGEGGAIITVASA-AALAPLP---------------------DHYAYCTSKAGLVMATKVLAREL 189 (266)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEcch-hhccCCC---------------------CChHHHHHHHHHHHHHHHHHHHH
Confidence 44555555543 2123589999998 4442111 0134999999999999988775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+...... ........+.... + ...+.+.+|+|+++..++... ...| .+++.|+
T Consensus 190 ~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~---p-~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 4egf_A 190 GPHGIRANSVCPTVVLTEMGQRVW-GDEAKSAPMIARI---P-LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG 262 (266)
T ss_dssp GGGTEEEEEEEESCBCSHHHHHHT-CSHHHHHHHHTTC---T-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhCeEEEEEEeCCCcCchhhhhc-cChHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence 3899999999999875421110 0112222222221 1 224678999999999998653 3344 5666543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.97 E-value=4.7e-05 Score=56.59 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=72.4
Q ss_pred cHHHHHHHHhc----cCCc-cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAK----VHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~-~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++.. . +. .+||++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 115 g~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e 171 (258)
T 3a28_C 115 SVFFGIQAASRKFDEL-GVKGKIINAASIAAIQGFP----------------------ILSAYSTTKFAVRGLTQAAAQE 171 (258)
T ss_dssp HHHHHHHHHHHHHHHH-TCCCEEEEECCGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCcEEEEECcchhccCCC----------------------CchhHHHHHHHHHHHHHHHHHH
Confidence 44555665543 3 44 6899999983333211 1134999999999999988765
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCC--------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG- 142 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~- 142 (216)
.++++.+++|+.|..+-..... .........+... .+ ...+.+.+|+|+++..++... ...|
T Consensus 172 ~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~p~dvA~~v~~l~s~~~~~~tG~ 247 (258)
T 3a28_C 172 LAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSS---IA-LGRPSVPEDVAGLVSFLASENSNYVTGQ 247 (258)
T ss_dssp HGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhc---CC-CCCccCHHHHHHHHHHHhCcccCCCCCC
Confidence 3899999999999764311000 0000111111111 12 123789999999999998653 2344
Q ss_pred eEEEecC
Q 027969 143 RYLLAGS 149 (216)
Q Consensus 143 ~~~~~~~ 149 (216)
.+.+.|+
T Consensus 248 ~i~vdGG 254 (258)
T 3a28_C 248 VMLVDGG 254 (258)
T ss_dssp EEEESSS
T ss_pred EEEECCC
Confidence 4555543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=5.7e-05 Score=55.79 Aligned_cols=120 Identities=15% Similarity=0.004 Sum_probs=73.3
Q ss_pred cHHHHHHH----HhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRS----CAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~----~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.+++++ +++.+...++|++||.+...+... ...|+.||...+.+.+.++.+
T Consensus 114 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~ 171 (247)
T 3rwb_A 114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN----------------------MAAYVAAKGGVIGFTRALATEL 171 (247)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC----------------------chhhHHHHHHHHHHHHHHHHHh
Confidence 44555555 444422568999999844432211 134999999999999888776
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+............+..... ....+...+|+|+++..++... ...| .+++.|+
T Consensus 172 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~------~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 243 (247)
T 3rwb_A 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQ------AMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243 (247)
T ss_dssp GGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHS------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCeEEEEEeeCcCcCccccccChhHHHHHHhccc------ccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 4899999999999875432111011011111100 1223578999999999998653 2344 5556544
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00015 Score=54.96 Aligned_cols=122 Identities=15% Similarity=0.050 Sum_probs=76.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
|+.++++++... ..-.++|++||.++.++... . ...|+.||...+.+.+.++.+
T Consensus 155 g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~-------~~~Y~asKaa~~~~~~~la~e~~~~ 213 (297)
T 1d7o_A 155 SFVSLLSHFLPIMNPGGASISLTYIASERIIPG--------------Y-------GGGMSSAKAALESDTRVLAFEAGRK 213 (297)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT--------------C-------TTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCceEEEEeccccccCCCC--------------c-------chHHHHHHHHHHHHHHHHHHHhCcc
Confidence 567788888653 11258999999744332211 0 013999999999999887754
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|.++..... .....+........ + ...+...+|+|+++..++... ...| .+.+.++
T Consensus 214 ~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~---p-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 214 QNIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNA---P-IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp HCCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHS---S-SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCcEEEEEeccccccchhhhc-cccHHHHHHhhccC---C-CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 489999999999998764321 11122222222221 1 123568999999999998642 2234 4555544
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00029 Score=52.47 Aligned_cols=119 Identities=17% Similarity=0.090 Sum_probs=74.7
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ .+. +..++|++||.++.++... . +...|+.||...+.+++.++++.
T Consensus 135 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------------~------~~~~Y~~sK~a~~~~~~~la~e~ 193 (267)
T 3gdg_A 135 GTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFP--------------Q------EQTSYNVAKAGCIHMARSLANEW 193 (267)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCSS--------------S------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-CCceEEEEccccccccCCC--------------C------CCCcchHHHHHHHHHHHHHHHHh
Confidence 455566655 444 4468999999844443210 0 11349999999999999998875
Q ss_pred C--CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 78 G--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 78 ~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
+ +.+..+.|+.|..+-... ............. ....+.+.+|+|+++..++... ...| .+++.|
T Consensus 194 ~~~i~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~----~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 194 RDFARVNSISPGYIDTGLSDF---VPKETQQLWHSMI----PMGRDGLAKELKGAYVYFASDASTYTTGADLLIDG 262 (267)
T ss_dssp TTTCEEEEEEECCEECSCGGG---SCHHHHHHHHTTS----TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred ccCcEEEEEECCccccchhhh---CCHHHHHHHHhcC----CCCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence 3 788899999997654321 1122222222221 2234788999999999999653 2334 455554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0003 Score=54.21 Aligned_cols=104 Identities=13% Similarity=-0.017 Sum_probs=68.4
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 92 (216)
..+||++||. ..+.... ....|+.||...+.+.+.++.+. |+.+.+++|+.|..+
T Consensus 213 ~g~IV~isS~-~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 213 NYSIINMVDA-MTNQPLL---------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp CEEEEEECCT-TTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred CcEEEEECch-hhccCCC---------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 4689999998 4331110 11349999999999999887653 899999999999887
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
. . ........+... .+-...+...+|+|++++.++... ...| .+.+.|+
T Consensus 271 ~-~----~~~~~~~~~~~~---~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 322 (328)
T 2qhx_A 271 D-D----MPPAVWEGHRSK---VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322 (328)
T ss_dssp C-C----SCHHHHHHHHTT---CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-c----ccHHHHHHHHhh---CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 6 2 123333333322 121114678999999999999642 2344 4555543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00016 Score=54.02 Aligned_cols=123 Identities=20% Similarity=0.148 Sum_probs=74.6
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++... ..-.++|++||. ...... . . +...|+.||...+.+.+.++.+ .
T Consensus 130 g~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------~------~------~~~~Y~asKaa~~~~~~~la~e~~~~ 188 (270)
T 3is3_A 130 GQFFVAREAYRHLTEGGRIVLTSSN-TSKDFS--------V------P------KHSLYSGSKGAVDSFVRIFSKDCGDK 188 (270)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECCT-TTTTCC--------C------T------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCc-hhccCC--------C------C------CCchhHHHHHHHHHHHHHHHHHhccc
Confidence 567777877664 122489999997 311000 0 0 1134999999999999998876 4
Q ss_pred CCcEEEEcCCCccCCCCCCC-------C-CccH-HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEE
Q 027969 78 GIDLVAIHPGTVIGPFFQPI-------L-NFGA-EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYL 145 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~-------~-~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~ 145 (216)
|+++.+++|+.|..+-.... . .... .......... ....+.+.+|+|+++..++... ...| .++
T Consensus 189 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~ 264 (270)
T 3is3_A 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS----PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLT 264 (270)
T ss_dssp TCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred CeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCccCCccCcEEE
Confidence 89999999999987642200 0 0011 1111111111 1224678999999999998643 2344 455
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 265 vdGG 268 (270)
T 3is3_A 265 LDGG 268 (270)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 5543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0002 Score=53.81 Aligned_cols=120 Identities=13% Similarity=0.161 Sum_probs=74.8
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. .+.-.++|++||.++..+... . +...|+.||...+.+.+.++++
T Consensus 143 g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------------~------~~~~Y~asKaa~~~l~~~la~e~ 202 (276)
T 3r1i_A 143 GVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------------Q------QVSHYCTSKAAVVHLTKAMAVEL 202 (276)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--------------S------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--------------C------CcchHHHHHHHHHHHHHHHHHHH
Confidence 44555665543 212257999999733332210 0 1134999999999999998876
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.++++.+++|+.|..+-.... .......... .+ ...+.+.+|+|+++..++... ...| .+++.|+
T Consensus 203 ~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~---~p-~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 272 (276)
T 3r1i_A 203 APHQIRVNSVSPGYIRTELVEPL----ADYHALWEPK---IP-LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272 (276)
T ss_dssp GGGTEEEEEEEECCBCSTTTGGG----GGGHHHHGGG---ST-TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCcEEEEEeeCCCcCCccccc----hHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence 489999999999987654321 1112222211 11 223778999999999998743 2344 5666554
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.90 E-value=5.8e-05 Score=56.32 Aligned_cols=118 Identities=20% Similarity=0.172 Sum_probs=76.5
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~ 77 (216)
|+.++++++... .+..+||++||. ..++.. ....|+.||...+.+.+.++.+ .
T Consensus 114 g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 170 (263)
T 2a4k_A 114 GSFLVARKAGEVLEEGGSLVLTGSV-AGLGAF----------------------GLAHYAAGKLGVVGLARTLALELARK 170 (263)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECCC-TTCCHH----------------------HHHHHHHCSSHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecc-hhcCCC----------------------CcHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 566777777653 123589999998 444210 1134999999999988887764 3
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++.+++|+.|.++..... ............ + ...+.+.+|+|+++..++... ...| .+.+.|+
T Consensus 171 gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~---p-~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 171 GVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGAS---P-LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 238 (263)
T ss_dssp TCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTS---T-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 89999999999988754321 122222222221 1 124789999999999998653 2334 4555544
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00013 Score=54.54 Aligned_cols=120 Identities=23% Similarity=0.147 Sum_probs=71.8
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..-.++|++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 139 g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~ 196 (267)
T 3u5t_A 139 GTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS----------------------YGIYAAAKAGVEAMTHVLSKELRGR 196 (267)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC----------------------chHHHHHHHHHHHHHHHHHHHhhhh
Confidence 566777776542 12258999999733332110 1349999999999999998764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++.+++|+.|..+-.... ........+... . ....+...+|+|+++..++.... ..| .+.+.|+
T Consensus 197 gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~---~-p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 197 DITVNAVAPGPTATDLFLEG--KSDEVRDRFAKL---A-PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp CCEEEEEEECCBC-------------CHHHHHTS---S-TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred CCEEEEEEECCCcCcccccc--CCHHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 89999999999976543211 001111112111 1 12247789999999999986432 244 4555554
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.88 E-value=6.6e-05 Score=55.62 Aligned_cols=108 Identities=14% Similarity=0.056 Sum_probs=59.4
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||.++.++... ...|+.||...+.+.+.++.+.
T Consensus 117 g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 173 (252)
T 3h7a_A 117 AGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSG----------------------FAAFASAKFGLRAVAQSMAREL 173 (252)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTCCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECCHHHcCCCCC----------------------CccHHHHHHHHHHHHHHHHHHh
Confidence 344455544 444 4468999999844432211 1349999999999999887653
Q ss_pred ---CCcE-EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCC
Q 027969 78 ---GIDL-VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 140 (216)
Q Consensus 78 ---~~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 140 (216)
|+++ .++.|+.|..+-.... ......... .. ....+.+.+|+|++++.++..+..
T Consensus 174 ~~~gi~v~n~v~PG~v~T~~~~~~---~~~~~~~~~---~~--~~~~~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 174 MPKNIHVAHLIIDSGVDTAWVRER---REQMFGKDA---LA--NPDLLMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp GGGTEEEEEEEEC-----------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred hhcCCEEEEEecCCccCChhhhcc---chhhhhhhh---hc--CCccCCCHHHHHHHHHHHHhCchh
Confidence 7899 7999999866543211 001100000 01 112289999999999999986543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00013 Score=54.22 Aligned_cols=100 Identities=17% Similarity=0.073 Sum_probs=62.8
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.||...+.+++.++.+
T Consensus 141 g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~ 197 (262)
T 3rkr_A 141 APYLLLRAFAPAMIAA-KRGHIINISSL-AGKNPVA---------------------DGAAYTASKWGLNGLMTSAAEEL 197 (262)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEEEECSS-CSSCCCT---------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCceEEEEech-hhcCCCC---------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 4555666553 34 45789999998 4331110 1134999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
.|+++.+++|+.|..+-... ..... ....++..+|+|+++..++....
T Consensus 198 ~~~gi~v~~v~PG~v~t~~~~~-----------~~~~~----~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 198 RQHQVRVSLVAPGSVRTEFGVG-----------LSAKK----SALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp GGGTCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred hhcCcEEEEEecCCCcCCcccc-----------ccccc----ccccCCCHHHHHHHHHHHhcCcc
Confidence 48999999999996543211 00000 12346789999999999997643
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00012 Score=54.07 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=63.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.||...+.+.+.++.+.
T Consensus 109 g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~ 165 (248)
T 3asu_A 109 GLVYMTRAVLPGMVER-NHGHIINIGST-AGSWPYA---------------------GGNVYGATKAFVRQFSLNLRTDL 165 (248)
T ss_dssp HHHHHHHHHHHHHHHH-TCCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEEccc-hhccCCC---------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 4455555554 34 45789999998 4331110 11349999999999999987653
Q ss_pred ---CCcEEEEcCCCccCCCCCCC-CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPI-LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+++.+++|+.|.|...... ........... + ....+++.+|+|+++..++..+
T Consensus 166 ~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~------~-~~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 166 HGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT------Y-QNTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp TTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred hhcCcEEEEEeccccccCcchhhcccCchHHHHHH------H-hccCCCCHHHHHHHHHHHhcCC
Confidence 89999999999985322110 00000000000 0 1123468999999999999754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=55.39 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=62.8
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
-.+||++||.++..+.. +...|+.||...+.+.+.++.+ .++++.+++|+.|..+
T Consensus 165 ~g~IV~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 222 (281)
T 4dry_A 165 GGRIINNGSISAQTPRP----------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD 222 (281)
T ss_dssp CEEEEEECCGGGTCCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-
T ss_pred CcEEEEECCHHhCCCCC----------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcCh
Confidence 35899999983333211 1134999999999999988765 4899999999999664
Q ss_pred CCCCCCCccHHHHHHHHcCC-CCCC--CCCceeehhhhHHHHHHhhcCCCCCce
Q 027969 93 FFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASGR 143 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~ 143 (216)
-.. ...... .... ....++..+|+|++++.++..+....+
T Consensus 223 ~~~-----------~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i 265 (281)
T 4dry_A 223 MTA-----------RMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANV 265 (281)
T ss_dssp -----------------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred hhh-----------hhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence 321 111111 1111 122378899999999999988766554
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00016 Score=54.32 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=74.5
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +.+.-.+||++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 135 g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~ 192 (277)
T 3tsc_A 135 GTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP----------------------FMIHYTASKHAVTGLARAFAAEL 192 (277)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS----------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC----------------------CchhhHHHHHHHHHHHHHHHHHh
Confidence 4455555543 331235899999983333211 11349999999999999888763
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---CCCC--CCCceeehhhhHHHHHHhhcCCC--CCc-eEEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA--FPYIFVEIRDVVYAHIRALEVPK--ASG-RYLL 146 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~ 146 (216)
|+++.+++|+.|..+-.... ............. ..+. ....+.+.+|+|++++.++.... ..| .+.+
T Consensus 193 ~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~v 270 (277)
T 3tsc_A 193 GKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPV 270 (277)
T ss_dssp GGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred CccCeEEEEEEeCCCcCCcccch--hhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEee
Confidence 89999999999987653210 0111111111111 1111 22248999999999999996532 334 5566
Q ss_pred ecC
Q 027969 147 AGS 149 (216)
Q Consensus 147 ~~~ 149 (216)
.|+
T Consensus 271 dGG 273 (277)
T 3tsc_A 271 DQG 273 (277)
T ss_dssp STT
T ss_pred CCC
Confidence 544
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0001 Score=55.01 Aligned_cols=106 Identities=19% Similarity=0.278 Sum_probs=63.9
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 115 g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~ 171 (264)
T 3tfo_A 115 GVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVVPT----------------------AAVYCATKFAVRAISDGLRQES 171 (264)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTT----------------------CHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEEEcCHHHcccCCC----------------------ChhHHHHHHHHHHHHHHHHHhC
Confidence 344444444 334 4468999999833332111 1349999999999999988765
Q ss_pred -CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKAS 141 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~ 141 (216)
++++.+++||.|..+-.... .... .... ....+...+|+|++++.++..+...
T Consensus 172 ~gIrvn~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~ 228 (264)
T 3tfo_A 172 TNIRVTCVNPGVVESELAGTI-----------THEETMAAMDTYRAIALQPADIARAVRQVIEAPQSV 228 (264)
T ss_dssp SSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSCTTE
T ss_pred CCCEEEEEecCCCcCcccccc-----------cchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCccC
Confidence 89999999999976542210 0000 0011 1112578999999999999876553
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00027 Score=52.24 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=71.5
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||.++..+... ...|+.||...+.+.+.++++.
T Consensus 127 g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asK~a~~~l~~~la~e~ 183 (252)
T 3f1l_A 127 ATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQGRAN----------------------WGAYAASKFATEGMMQVLADEY 183 (252)
T ss_dssp HHHHHHHHHHHHHHTS-SSCEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHC-CCCEEEEECChhhccCCCC----------------------CchhHHHHHHHHHHHHHHHHHh
Confidence 455666666 444 5578999999844332211 1349999999999999998875
Q ss_pred C--CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 78 G--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 78 ~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+ +++..+.|+.|..+ +........ ....+.+.+|+|.++.+++.... ..| .+.+.|+
T Consensus 184 ~~~irvn~v~PG~v~t~-----------~~~~~~~~~----~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG 245 (252)
T 3f1l_A 184 QQRLRVNCINPGGTRTA-----------MRASAFPTE----DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG 245 (252)
T ss_dssp TTTCEEEEEECCSBSSH-----------HHHHHCTTC----CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred cCCcEEEEEecCcccCc-----------hhhhhCCcc----chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence 3 88889999988542 122221111 12346789999999999986532 334 4555543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00011 Score=54.39 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=70.4
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +..+||++||.++.++. + ....|+.||...+.+.+.++++.
T Consensus 121 g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~-----------------~-----~~~~Y~asK~a~~~~~~~la~e~ 177 (253)
T 2nm0_A 121 GTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGS-----------------A-----GQANYAASKAGLVGFARSLAREL 177 (253)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCCCCCCCH-----------------H-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCC-----------------C-----CcHHHHHHHHHHHHHHHHHHHHh
Confidence 4455565543 33 45799999997332211 0 11349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++++.+++|+.|..+-.... ........... .+ ...+++.+|+|+++..++... ...| .+.+.|+
T Consensus 178 ~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~---~p-~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG 248 (253)
T 2nm0_A 178 GSRNITFNVVAPGFVDTDMTKVL---TDEQRANIVSQ---VP-LGRYARPEEIAATVRFLASDDASYITGAVIPVDGG 248 (253)
T ss_dssp CSSSEEEEEEEECSBCC------------CHHHHHTT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhcCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence 79999999999876542210 00111111111 12 224789999999999998753 2344 4555543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00033 Score=51.65 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=67.9
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. . + .++|++||.++..+.. ....|+.||...+.+.+.++.+
T Consensus 118 g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~ 173 (247)
T 2jah_A 118 GLMYMTRAALPHLLRS-K-GTVVQMSSIAGRVNVR----------------------NAAVYQATKFGVNAFSETLRQEV 173 (247)
T ss_dssp HHHHHHHHHHHHHHHH-T-CEEEEECCGGGTCCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC-C-CEEEEEccHHhcCCCC----------------------CCcHHHHHHHHHHHHHHHHHHHh
Confidence 45566666543 3 4 6999999983332111 1134999999999998887764
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+++.+++|+.|..+-..... ... ........+ +...+++.+|+|+++..++..+
T Consensus 174 ~~~gi~v~~v~PG~v~T~~~~~~~--~~~-~~~~~~~~~---~~~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 174 TERGVRVVVIEPGTTDTELRGHIT--HTA-TKEMYEQRI---SQIRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp GGGTCEEEEEEECSBSSSGGGGCC--CHH-HHHHHHHHT---TTSCCBCHHHHHHHHHHHHHSC
T ss_pred cccCcEEEEEECCCCCCcchhccc--chh-hHHHHHhcc---cccCCCCHHHHHHHHHHHhCCC
Confidence 3899999999999876432111 111 111111101 1222589999999999999764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00016 Score=54.18 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=61.1
Q ss_pred HHHHHHhccCCcc-EEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 5 NVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 5 ~ll~~~~~~~~~~-~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
.++..+++. +.. +||++||. ..+.... ....|+.||...+.+.+.++.+ .|++
T Consensus 139 ~~~~~m~~~-~~g~~IV~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~el~~~gIr 195 (272)
T 2nwq_A 139 LLLPRLIAH-GAGASIVNLGSV-AGKWPYP---------------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVR 195 (272)
T ss_dssp HHHHHHHHH-CTTCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCE
T ss_pred HHHHHHHhc-CCCcEEEEeCCc-hhccCCC---------------------CCchHHHHHHHHHHHHHHHHHHhCccCeE
Confidence 344444444 445 89999998 4331110 0134999999999999988765 3799
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+.+++|+.|..+-............... + ....++..+|+|++++.++..+
T Consensus 196 vn~v~PG~v~T~~~~~~~~~~~~~~~~~------~-~~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 196 VTNLEPGLCESEFSLVRFGGDQARYDKT------Y-AGAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp EEEEEECSBC---------------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred EEEEEcCCCcCcchhcccccchHHHHHh------h-ccCCCCCHHHHHHHHHHHhCCC
Confidence 9999999998764221000000000000 0 1122578999999999999754
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00084 Score=50.53 Aligned_cols=124 Identities=19% Similarity=0.202 Sum_probs=74.3
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++.. .+.-.+||++||.++..+... ...|+.||...+.+.+.++.+
T Consensus 139 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~ 196 (286)
T 3uve_A 139 GVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPH----------------------TGHYVAAKHGVVGLMRAFGVEL 196 (286)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCC----------------------ccHHHHHHHHHHHHHHHHHHHh
Confidence 45556665543 212358999999833332111 134999999999999988775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCC----------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPIL----------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 142 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 142 (216)
.|+++.+++|+.|..+-..... ................ ....+.+.+|+|+++.+++... ...|
T Consensus 197 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~r~~~p~dvA~~v~fL~s~~a~~itG 274 (286)
T 3uve_A 197 GQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT--LPIPWVEPIDISNAVLFFASDEARYITG 274 (286)
T ss_dssp GGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCS--SSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred cccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhc--cCCCcCCHHHHHHHHHHHcCccccCCcC
Confidence 4899999999999877543210 0000001111000000 1245789999999999999643 2334
Q ss_pred -eEEEecC
Q 027969 143 -RYLLAGS 149 (216)
Q Consensus 143 -~~~~~~~ 149 (216)
.+++.|+
T Consensus 275 ~~i~vdGG 282 (286)
T 3uve_A 275 VTLPIDAG 282 (286)
T ss_dssp CEEEESTT
T ss_pred CEEeECCc
Confidence 5566543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=55.52 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=65.9
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-- 77 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-- 77 (216)
|+.++++++... .+..+||++||. ..+.... +...|+.||...|.+++.++.+.
T Consensus 140 g~~~l~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~l~~e~~~ 197 (286)
T 1xu9_A 140 SYVVLTVAALPMLKQSNGSIVVVSSL-AGKVAYP---------------------MVAAYSASKFALDGFFSSIRKEYSV 197 (286)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEEG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCc-ccccCCC---------------------CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666665432 022589999998 4332110 11349999999999998876543
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
++++++++|+.|..+. ......+. ....+++.+|+|++++.++..+.
T Consensus 198 ~~~~i~v~~v~Pg~v~t~~-----------~~~~~~~~----~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 198 SRVNVSITLCVLGLIDTET-----------AMKAVSGI----VHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HTCCCEEEEEEECCBCCHH-----------HHHHSCGG----GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeecCccCChh-----------HHHhcccc----ccCCCCCHHHHHHHHHHHHhcCC
Confidence 8999999999985532 11111111 12346889999999999997653
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.79 E-value=8.2e-05 Score=54.29 Aligned_cols=94 Identities=20% Similarity=0.101 Sum_probs=59.4
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.+++.+++. +..+||++||. ..+.... +...|+.||...|.+++.++.+ .|++
T Consensus 118 ~~~~~~~~~~-~~~~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 174 (234)
T 2ehd_A 118 RHAVPALLRR-GGGTIVNVGSL-AGKNPFK---------------------GGAAYNASKFGLLGLAGAAMLDLREANVR 174 (234)
T ss_dssp HHHHHHHHTT-TCEEEEEECCT-TTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHhC-CCcEEEEECCc-hhcCCCC---------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcE
Confidence 3555556665 66899999997 4442110 1134999999999988887654 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+.++||+.+..+-... . .. . ..+++.+|+|+++..++..+
T Consensus 175 v~~v~Pg~v~t~~~~~----~--------~~-----~-~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 175 VVNVLPGSVDTGFAGN----T--------PG-----Q-AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp EEEEECC----------------------------------CCHHHHHHHHHHHHHSC
T ss_pred EEEEEeCCCcCCcccc----c--------cc-----c-cCCCCHHHHHHHHHHHhCCC
Confidence 9999999986643211 0 00 0 11578999999999999764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00025 Score=51.79 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=63.9
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..-.+||++||. ..+.... +...|+.||...+.+.+.++.+.
T Consensus 107 g~~~l~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~ 164 (236)
T 1ooe_A 107 SSAIAAKLATTHLKPGGLLQLTGAA-AAMGPTP---------------------SMIGYGMAKAAVHHLTSSLAAKDSGL 164 (236)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECCG-GGGSCCT---------------------TBHHHHHHHHHHHHHHHHHHSTTSSC
T ss_pred HHHHHHHHHHHHhccCCEEEEECch-hhccCCC---------------------CcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 456677777653 112589999998 4441110 11349999999999999988654
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
|+++.+++|+.|.++. ........ ....++..+|+|+++...+
T Consensus 165 ~~gi~v~~v~Pg~v~t~~-----------~~~~~~~~----~~~~~~~~~dvA~~i~~~l 209 (236)
T 1ooe_A 165 PDNSAVLTIMPVTLDTPM-----------NRKWMPNA----DHSSWTPLSFISEHLLKWT 209 (236)
T ss_dssp CTTCEEEEEEESCBCCHH-----------HHHHSTTC----CGGGCBCHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCcccCcc-----------hhhcCCCc----cccccCCHHHHHHHHHHHH
Confidence 4999999999997642 11111111 1123567899999998666
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00011 Score=60.08 Aligned_cols=125 Identities=14% Similarity=0.015 Sum_probs=84.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+|.+++....+..+||++||.++++|... ...|+.+|...|.+++... ..|+++
T Consensus 369 g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g----------------------~~~YaaaKa~ld~la~~~~-~~gi~v 425 (511)
T 2z5l_A 369 GAELLHQLTADIKGLDAFVLFSSVTGTWGNAG----------------------QGAYAAANAALDALAERRR-AAGLPA 425 (511)
T ss_dssp HHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT----------------------BHHHHHHHHHHHHHHHHHH-TTTCCC
T ss_pred HHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC----------------------CHHHHHHHHHHHHHHHHHH-HcCCcE
Confidence 67888888876535678999999867775431 1349999999999998764 459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHHHHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLR 161 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~ 161 (216)
++++|+.+-+.+... ... ...+.. ....+++.+|+++++..++..+.. ...+ ..+.+..+...+.
T Consensus 426 ~sv~pG~~~~tgm~~---~~~--~~~~~~------~g~~~l~~e~~a~~l~~al~~~~~--~v~v--~~~d~~~~~~~~~ 490 (511)
T 2z5l_A 426 TSVAWGLWGGGGMAA---GAG--EESLSR------RGLRAMDPDAAVDALLGAMGRNDV--CVTV--VDVDWERFAPATN 490 (511)
T ss_dssp EEEEECCBCSTTCCC---CHH--HHHHHH------HTBCCBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHH
T ss_pred EEEECCcccCCcccc---ccc--HHHHHh------cCCCCCCHHHHHHHHHHHHhCCCC--EEEE--EeCCHHHHHhhhc
Confidence 999999884433221 111 111111 134578999999999999976432 2222 2456777777666
Q ss_pred HhC
Q 027969 162 EHY 164 (216)
Q Consensus 162 ~~~ 164 (216)
...
T Consensus 491 ~~~ 493 (511)
T 2z5l_A 491 AIR 493 (511)
T ss_dssp HHS
T ss_pred ccC
Confidence 543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0001 Score=53.76 Aligned_cols=100 Identities=20% Similarity=0.181 Sum_probs=62.2
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-- 77 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-- 77 (216)
|+.++++++... .+-.++|++||. ..+.... ....|+.||...+.+.+.++++.
T Consensus 106 g~~~l~~~~~~~~~~~~~~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~~~ 163 (230)
T 3guy_A 106 SAINVLRELVKRYKDQPVNVVMIMST-AAQQPKA---------------------QESTYCAVKWAVKGLIESVRLELKG 163 (230)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeec-ccCCCCC---------------------CCchhHHHHHHHHHHHHHHHHHHHh
Confidence 455666665442 111289999997 4432111 01349999999999999988764
Q ss_pred -CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+++..++|+.|..+-... .... . ....+.+.+|+|+++..++..+
T Consensus 164 ~gi~v~~v~PG~v~t~~~~~-----------~~~~---~-~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 164 KPMKIIAVYPGGMATEFWET-----------SGKS---L-DTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp SSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred cCeEEEEEECCcccChHHHh-----------cCCC---C-CcccCCCHHHHHHHHHHHHhCc
Confidence 7999999999996543211 0000 0 1234788999999999998754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0005 Score=51.85 Aligned_cols=103 Identities=16% Similarity=0.065 Sum_probs=66.5
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 92 (216)
..+||++||. ..+.... ....|+.||...+.+.+.++.+. |+++.+++|+.|.++
T Consensus 173 ~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 230 (288)
T 2x9g_A 173 NLSIVNLCDA-MVDQPCM---------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP 230 (288)
T ss_dssp CEEEEEECCT-TTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCC
T ss_pred CeEEEEEecc-cccCCCC---------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCc
Confidence 4589999997 4442110 11349999999999998887653 899999999999987
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCce-eehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIF-VEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
. . . .......+... .+ ...+ ...+|+|++++.++... ...| .+.+.|+
T Consensus 231 ~-~-~---~~~~~~~~~~~---~p-~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 282 (288)
T 2x9g_A 231 V-A-M---GEEEKDKWRRK---VP-LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282 (288)
T ss_dssp T-T-S---CHHHHHHHHHT---CT-TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-c-c---ChHHHHHHHhh---CC-CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence 6 2 1 12222222222 12 1124 68999999999999642 2344 4445443
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00029 Score=52.40 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=63.2
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
..+||++||. ..+.... ... +...|+.||...|.+++.++++ .++++.++||+.|..+
T Consensus 165 ~~~iv~isS~-~~~~~~~------------~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 165 RAAIINMSSI-LGSIQGN------------TDG------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp TCEEEEECCG-GGCSTTC------------CSC------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred CceEEEEecc-cccccCC------------CCC------CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 3689999998 4442211 000 1134999999999999988766 4899999999999654
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCceEEE-ecCCC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRYLL-AGSVA 151 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~-~~~~~ 151 (216)
-... ..++..+|+|+.++.++... ...|.|+. .|..+
T Consensus 226 ~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 226 MGGS----------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp TTCT----------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred CCCC----------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 3210 12467899999999988743 23444533 34433
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00073 Score=51.29 Aligned_cols=124 Identities=21% Similarity=0.160 Sum_probs=74.1
Q ss_pred cHHHHHHHHhc----cCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAK----VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~----~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++.. .++..+||++||.++..+... ...|+.||...+.+.+.++.+.
T Consensus 152 g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 209 (299)
T 3t7c_A 152 GAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN----------------------IGNYIASKHGLHGLMRTMALEL 209 (299)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----------------------cchHHHHHHHHHHHHHHHHHHh
Confidence 45556665533 223468999999833332111 1349999999999999887764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCC----------CccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPIL----------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 142 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 142 (216)
|+++.+++|+.|..+...... ................ ....+...+|+|+++++++.... ..|
T Consensus 210 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~r~~~pedvA~~v~fL~s~~a~~itG 287 (299)
T 3t7c_A 210 GPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV--LPIPYVEPADISNAILFLVSDDARYITG 287 (299)
T ss_dssp GGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS--SSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred cccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc--cCcCCCCHHHHHHHHHHHhCcccccCcC
Confidence 899999999999887643210 0000000000000000 11457899999999999996532 334
Q ss_pred -eEEEecC
Q 027969 143 -RYLLAGS 149 (216)
Q Consensus 143 -~~~~~~~ 149 (216)
.+++.|+
T Consensus 288 ~~i~vdGG 295 (299)
T 3t7c_A 288 VSLPVDGG 295 (299)
T ss_dssp CEEEESTT
T ss_pred CEEeeCCC
Confidence 5566543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00036 Score=51.58 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=64.1
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||.++.++... ...|+.||...+.+.+.++.+.
T Consensus 120 g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~ 176 (250)
T 3nyw_A 120 AQYGILKTVTEIMKVQ-KNGYIFNVASRAAKYGFAD----------------------GGIYGSTKFALLGLAESLYREL 176 (250)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECC-------CC----------------------TTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEEEccHHhcCCCCC----------------------CcchHHHHHHHHHHHHHHHHHh
Confidence 445555555 334 4468999999844442210 1349999999999999887753
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
|+++.+++|+.|..+- ...... .. ....+++.+|+|+++..++..+.
T Consensus 177 ~~~gi~vn~v~PG~v~T~~-----------~~~~~~---~~-~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 177 APLGIRVTTLCPGWVNTDM-----------AKKAGT---PF-KDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp GGGTEEEEEEEESSBCSHH-----------HHHTTC---CS-CGGGSBCHHHHHHHHHHHHTSCT
T ss_pred hhcCcEEEEEecCcccCch-----------hhhcCC---Cc-ccccCCCHHHHHHHHHHHHcCCC
Confidence 8999999999985431 111111 11 12347899999999999998654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00043 Score=50.86 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=65.4
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..++|++||..+..+... ...|+.||...+.+.+.++.+
T Consensus 129 g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~ 185 (247)
T 3i1j_A 129 ATFMLTRALLPLLKRS-EDASIAFTSSSVGRKGRAN----------------------WGAYGVSKFATEGLMQTLADEL 185 (247)
T ss_dssp HHHHHHHHHHHHHTTS-SSEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEcchhhcCCCCC----------------------cchhHHHHHHHHHHHHHHHHHh
Confidence 455666666 444 4568999999733332111 134999999999999988765
Q ss_pred ---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 ---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.++++.+++|+.|-.+ +........ ....+...+|+|+++..++..
T Consensus 186 ~~~~~i~v~~v~PG~v~t~-----------~~~~~~~~~----~~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 186 EGVTAVRANSINPGATRTG-----------MRAQAYPDE----NPLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp TTTSSEEEEEEECCCCSSH-----------HHHHHSTTS----CGGGSCCGGGGTHHHHHHHSG
T ss_pred cCCCCeEEEEEecCcccCc-----------cchhccccc----CccCCCCHHHHHHHHHHHhCc
Confidence 3789999999988442 122221111 122356789999999999864
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00027 Score=52.66 Aligned_cols=124 Identities=12% Similarity=0.018 Sum_probs=73.4
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. +-.+||++||.++..+.. ....|+.||...+.+.+.++.+.
T Consensus 121 g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~ 177 (265)
T 3lf2_A 121 SVIHPVRAFLPQLESR-ADAAIVCVNSLLASQPEP----------------------HMVATSAARAGVKNLVRSMAFEF 177 (265)
T ss_dssp HHHHHHHHHHHHHTTS-TTEEEEEEEEGGGTSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-CCeEEEEECCcccCCCCC----------------------CchhhHHHHHHHHHHHHHHHHHh
Confidence 4556666653 33 446899999983333211 01349999999999999887754
Q ss_pred ---CCcEEEEcCCCccCCCCCCC------CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEE
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPI------LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYL 145 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~ 145 (216)
|+++.+++|+.|..+..... .......+..........| ...+...+|+|+++..++... ...| .+.
T Consensus 178 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~pedvA~~v~fL~s~~~~~itG~~i~ 256 (265)
T 3lf2_A 178 APKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-LGRLGKPIEAARAILFLASPLSAYTTGSHID 256 (265)
T ss_dssp GGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEE
T ss_pred cccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-cCCCcCHHHHHHHHHHHhCchhcCcCCCEEE
Confidence 89999999999977532100 0001111111111101112 223678999999999998642 2344 455
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 257 vdGG 260 (265)
T 3lf2_A 257 VSGG 260 (265)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 5544
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.001 Score=49.98 Aligned_cols=121 Identities=16% Similarity=0.102 Sum_probs=71.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN- 77 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~- 77 (216)
|+.++++++... .+ .++|++||.++.++... ...|+.||...+.+.+.++.+.
T Consensus 118 g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~ 174 (281)
T 3zv4_A 118 GYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGG----------------------GPLYTATKHAVVGLVRQMAFELA 174 (281)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSS----------------------CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCC----------------------CchhHHHHHHHHHHHHHHHHHhc
Confidence 455566665432 13 58999999844332211 1349999999999999988764
Q ss_pred -CCcEEEEcCCCccCCCCCCCCCccH-------HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC---CCc-eEE
Q 027969 78 -GIDLVAIHPGTVIGPFFQPILNFGA-------EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---ASG-RYL 145 (216)
Q Consensus 78 -~~~~~ilR~~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~ 145 (216)
++++..++|+.|..+-......... .....+... .+ ...+...+|+|++++.++..+. ..| .+.
T Consensus 175 ~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~ 250 (281)
T 3zv4_A 175 PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV---LP-IGRMPALEEYTGAYVFFATRGDSLPATGALLN 250 (281)
T ss_dssp TTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT---CT-TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEE
T ss_pred CCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc---CC-CCCCCCHHHHHHHHHHhhcccccccccCcEEE
Confidence 4899999999998764322110000 011111111 11 2237789999999999997322 344 555
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 251 vdGG 254 (281)
T 3zv4_A 251 YDGG 254 (281)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 5544
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00012 Score=54.46 Aligned_cols=122 Identities=16% Similarity=0.052 Sum_probs=69.3
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... .+-.++|++||.+...+... . ..|+.||...+.+.+.++.+.
T Consensus 125 g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~--------~~Y~asKaa~~~l~~~la~e~~~~ 182 (262)
T 3ksu_A 125 VAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--------------Y--------STYAGNKAPVEHYTRAASKELMKQ 182 (262)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC--------------C--------CC-----CHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhhcCCCEEEEEechhhccCCCC--------------C--------chhHHHHHHHHHHHHHHHHHHHHc
Confidence 566777877653 23358999999733332211 0 239999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC-CCCCc-eEEEecCCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-PKASG-RYLLAGSVA 151 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~~~~ 151 (216)
|+++.+++|+.|..+-..... .......... .. ....+...+|+|+++..++.. ....| .+.+.|+..
T Consensus 183 gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~---~~-~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 183 QISVNAIAPGPMDTSFFYGQE--TKESTAFHKS---QA-MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT 252 (262)
T ss_dssp TCEEEEEEECCCCTHHHHTCC------------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred CcEEEEEeeCCCcCccccccC--chHHHHHHHh---cC-cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence 899999999998654211100 0000000000 00 223477899999999999875 22345 556665543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=54.28 Aligned_cols=121 Identities=18% Similarity=0.066 Sum_probs=72.1
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||. ..+... . ....|+.||...+.+.+.++.+.
T Consensus 143 g~~~l~~~~~~~m~~~-~~g~Iv~isS~-~~~~~~---------------~------~~~~Y~asKaa~~~l~~~la~e~ 199 (275)
T 4imr_A 143 STVDMLQSALPKMVAR-KWGRVVSIGSI-NQLRPK---------------S------VVTAYAATKAAQHNLIQSQARDF 199 (275)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCG-GGTSCC---------------T------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCcEEEEECCH-HhCCCC---------------C------CchhhHHHHHHHHHHHHHHHHHh
Confidence 455566665 334 44689999998 443211 0 11349999999999999887764
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
|+++.+++|+.|..+..................... + ...+...+|+|++++.++... ...| .+++.|
T Consensus 200 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--p-~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 200 AGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN--W-MGRAGRPEEMVGAALFLASEACSFMTGETIFLTG 273 (275)
T ss_dssp GGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS--T-TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred cccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC--c-cCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence 899999999999765321100000111111111100 1 123667999999999998653 2344 455544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0026 Score=47.98 Aligned_cols=104 Identities=13% Similarity=-0.013 Sum_probs=66.4
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
..+||++||. ..+.... ....|+.||...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 176 ~g~Iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 233 (291)
T 1e7w_A 176 NYSIINMVDA-MTNQPLL---------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 233 (291)
T ss_dssp CEEEEEECCT-TTTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred CcEEEEEech-hhcCCCC---------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence 4689999998 4332110 1134999999999999888765 3899999999999665
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
- . . .......+... .+-...+...+|+|++++.++... ...| .+.+.|+
T Consensus 234 ~-~--~--~~~~~~~~~~~---~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 285 (291)
T 1e7w_A 234 D-D--M--PPAVWEGHRSK---VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285 (291)
T ss_dssp G-G--S--CHHHHHHHHTT---CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-c--C--CHHHHHHHHhh---CCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence 4 2 1 12233333222 120114678999999999998642 2344 4455443
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00061 Score=50.55 Aligned_cols=106 Identities=16% Similarity=0.068 Sum_probs=61.5
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i 83 (216)
+..+.+. +..++|++||. ..+... + ...|+.||...+.+.+.++.+ .|+++.+
T Consensus 133 ~~~~~~~-~~g~iv~isS~-~~~~~~----------------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 188 (260)
T 2qq5_A 133 ARLMVPA-GQGLIVVISSP-GSLQYM----------------F------NVPYGVGKAACDKLAADCAHELRRHGVSCVS 188 (260)
T ss_dssp HHHHGGG-TCCEEEEECCG-GGTSCC----------------S------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHhhc-CCcEEEEEcCh-hhcCCC----------------C------CCchHHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence 3334444 45789999997 443110 0 134999999999999988764 4899999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
++|+.|..+-.................. ...+ ...+...+|+|++++.++...
T Consensus 189 v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 189 LWPGIVQTELLKEHMAKEEVLQDPVLKQ-FKSA-FSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp EECCCSCTTTC------------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred EecCccccHHHHHhhccccccchhHHHH-HHhh-hccCCCHHHHHHHHHHHhcCc
Confidence 9999997764321100000000000000 0001 112457899999999998754
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00095 Score=48.78 Aligned_cols=98 Identities=17% Similarity=0.109 Sum_probs=64.3
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++. +. + .++|++||.++.++... ...|+.||...+.+.+.++.+.
T Consensus 111 g~~~l~~~~~~~~~~~-~-~~iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~ 166 (235)
T 3l6e_A 111 STILVAQQTVRLIGER-G-GVLANVLSSAAQVGKAN----------------------ESLYCASKWGMRGFLESLRAEL 166 (235)
T ss_dssp HHHHHHHHHHHHHTTT-C-EEEEEECCEECCSSCSS----------------------HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-C-CEEEEEeCHHhcCCCCC----------------------CcHHHHHHHHHHHHHHHHHHHh
Confidence 4555556553 33 3 38999999844442211 1349999999999999988753
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
|+++.+++|+.|-.+-.... ... ....+...+|+|++++.++..+.
T Consensus 167 ~~~gi~v~~v~PG~v~T~~~~~~-----------~~~-----~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 167 KDSPLRLVNLYPSGIRSEFWDNT-----------DHV-----DPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp TTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred hccCCEEEEEeCCCccCcchhcc-----------CCC-----CCcCCCCHHHHHHHHHHHHhCCC
Confidence 79999999999855432110 000 12247889999999999997654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0021 Score=46.77 Aligned_cols=68 Identities=19% Similarity=0.161 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhc
Q 027969 58 WYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 136 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 136 (216)
.|+.||...+.+.+.+... .++++.+++|+.|-.+-.... ........++..+|+|+++..++.
T Consensus 150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~---------------~~~~~~~~~~~p~dva~~v~~l~~ 214 (235)
T 3l77_A 150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK---------------PGKPKEKGYLKPDEIAEAVRCLLK 214 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---------------SCCCGGGTCBCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---------------CCcccccCCCCHHHHHHHHHHHHc
Confidence 4999999999999987544 389999999999965432211 000112247889999999999998
Q ss_pred CCCC
Q 027969 137 VPKA 140 (216)
Q Consensus 137 ~~~~ 140 (216)
.+..
T Consensus 215 ~~~~ 218 (235)
T 3l77_A 215 LPKD 218 (235)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 7654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00058 Score=52.57 Aligned_cols=121 Identities=22% Similarity=0.289 Sum_probs=70.6
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||.++..+.. ....|+.||...|.+.+.++.+
T Consensus 117 g~~~l~~~~~p~m~~~-~~g~IV~isS~~~~~~~~----------------------~~~~Y~aSK~a~~~~~~~la~el 173 (327)
T 1jtv_A 117 GTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLP----------------------FNDVYCASKFALEGLCESLAVLL 173 (327)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEECCcccccCCC----------------------CChHHHHHHHHHHHHHHHHHHHh
Confidence 556667665 334 557999999983333211 0134999999999999988764
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccH-----------HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCce
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGA-----------EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 143 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 143 (216)
.|+++.+++|+.|..+-......... ..+....... ..+...-.+..+|+|++++.++..+.....
T Consensus 174 ~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pedvA~~i~~l~~~~~~~~~ 252 (327)
T 1jtv_A 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHS-KQVFREAAQNPEEVAEVFLTALRAPKPTLR 252 (327)
T ss_dssp GGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHH-HHHHHHHCBCHHHHHHHHHHHHHCSSCCSE
T ss_pred hhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHH-HHhhhhcCCCHHHHHHHHHHHHcCCCCCeE
Confidence 58999999999998764322110000 0000000000 000000125799999999999987655556
Q ss_pred EEE
Q 027969 144 YLL 146 (216)
Q Consensus 144 ~~~ 146 (216)
|+.
T Consensus 253 ~~t 255 (327)
T 1jtv_A 253 YFT 255 (327)
T ss_dssp EES
T ss_pred EEe
Confidence 654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0013 Score=48.09 Aligned_cols=100 Identities=14% Similarity=0.033 Sum_probs=65.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
|+.++++++... .+-.+||++||. ..+.... ....|+.||...+.+.+.++.+
T Consensus 111 ~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 168 (241)
T 1dhr_A 111 TSTISSHLATKHLKEGGLLTLAGAK-AALDGTP---------------------GMIGYGMAKGAVHQLCQSLAGKNSGM 168 (241)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECCG-GGGSCCT---------------------TBHHHHHHHHHHHHHHHHHTSTTSSC
T ss_pred HHHHHHHHHHHhhccCCEEEEECCH-HHccCCC---------------------CchHHHHHHHHHHHHHHHHHHHhccC
Confidence 456677776552 112589999998 4442110 1134999999999999998765
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+++.+++|+.|-.+- ........ ....++..+|+|+++..++...
T Consensus 169 ~~gi~v~~v~PG~v~T~~-----------~~~~~~~~----~~~~~~~~~~vA~~v~~l~~~~ 216 (241)
T 1dhr_A 169 PSGAAAIAVLPVTLDTPM-----------NRKSMPEA----DFSSWTPLEFLVETFHDWITGN 216 (241)
T ss_dssp CTTCEEEEEEESCEECHH-----------HHHHSTTS----CGGGSEEHHHHHHHHHHHHTTT
T ss_pred CCCeEEEEEecCcccCcc-----------ccccCcch----hhccCCCHHHHHHHHHHHhcCC
Confidence 36999999999885431 11111111 1223578899999999998653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0032 Score=47.39 Aligned_cols=103 Identities=22% Similarity=0.176 Sum_probs=67.6
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..++|++||.++..+... ....|+.||...+.+.+.++.+
T Consensus 127 g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~~~~~la~e~~ 185 (285)
T 3sc4_A 127 GTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL---------------------RPTPYMMAKYGMTLCALGIAEELR 185 (285)
T ss_dssp HHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS---------------------CSHHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC---------------------CCchHHHHHHHHHHHHHHHHHHhc
Confidence 556677766543 14468999999733332100 1134999999999999998876
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
.|+++.+++|+.+... .+......... ....+...+|+|+++..++...
T Consensus 186 ~~gI~vn~v~PG~~v~t----------~~~~~~~~~~~---~~~r~~~pedvA~~~~~l~s~~ 235 (285)
T 3sc4_A 186 DAGIASNTLWPRTTVAT----------AAVQNLLGGDE---AMARSRKPEVYADAAYVVLNKP 235 (285)
T ss_dssp GGTCEEEEEECSSCBCC----------HHHHHHHTSCC---CCTTCBCTHHHHHHHHHHHTSC
T ss_pred ccCcEEEEEeCCCcccc----------HHHHhhccccc---cccCCCCHHHHHHHHHHHhCCc
Confidence 4899999999854321 12333332221 1223668899999999999765
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.002 Score=48.77 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhh
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 135 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 135 (216)
..|+.||...+.+.+.++++. ++.+.+++||.|..+-... ......++.++.++.++
T Consensus 234 ~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~ 291 (311)
T 3o26_A 234 AAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIA 291 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHH
Confidence 459999999999999998875 7999999999996643211 11235677888877776
Q ss_pred cCC
Q 027969 136 EVP 138 (216)
Q Consensus 136 ~~~ 138 (216)
..+
T Consensus 292 ~~~ 294 (311)
T 3o26_A 292 LFP 294 (311)
T ss_dssp TCC
T ss_pred hCC
Confidence 543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0027 Score=51.16 Aligned_cols=119 Identities=16% Similarity=0.045 Sum_probs=71.8
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++.+++... .+..+||++||.+++.+... ...|+.+|...+.+.+.++.+
T Consensus 322 g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g----------------------~~~YaasKaal~~l~~~la~e~~ 379 (454)
T 3u0b_A 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG----------------------QTNYATTKAGMIGLAEALAPVLA 379 (454)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC----------------------CHHHHHHHHHHHHHHHHHHHHhh
Confidence 577888877653 13468999999866654321 134999999888888777654
Q ss_pred -cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.++.|+.|..+-.... ........... . ....+...+|+|+++..++... ...| .+.+.|+
T Consensus 380 ~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~--~-~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG 449 (454)
T 3u0b_A 380 DKGITINAVAPGFIETKMTEAI----PLATREVGRRL--N-SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449 (454)
T ss_dssp TTTCEEEEEEECSBCC--------------CHHHHHS--B-TTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred hcCcEEEEEEcCcccChhhhhc----chhhHHHHHhh--c-cccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence 389999999999976543211 00000100000 0 1223567899999999998642 2344 4555543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00087 Score=54.55 Aligned_cols=104 Identities=18% Similarity=0.050 Sum_probs=73.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.+|.+++.+. ...+||++||+++++|... ...|+.+|...+.+.++.. ..|+++
T Consensus 354 g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~~g----------------------~~~YaAaKa~ldala~~~~-~~Gi~v 409 (496)
T 3mje_A 354 AARHLHELTADL-DLDAFVLFSSGAAVWGSGG----------------------QPGYAAANAYLDALAEHRR-SLGLTA 409 (496)
T ss_dssp HHHHHHHHHTTS-CCSEEEEEEEHHHHTTCTT----------------------CHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred HHHHHHHHhhcc-CCCEEEEEeChHhcCCCCC----------------------cHHHHHHHHHHHHHHHHHH-hcCCeE
Confidence 678999999888 6789999999877775432 1349999999999887664 459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
++|.|+.+.+.+..... .....+... ....+..++.++++..++..+.
T Consensus 410 ~sV~pG~w~~~gm~~~~----~~~~~l~~~------g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 410 SSVAWGTWGEVGMATDP----EVHDRLVRQ------GVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp EEEEECEESSSCC----------CHHHHHT------TEEEECHHHHHHHHHHHHHHTC
T ss_pred EEEECCcccCCccccCh----HHHHHHHhc------CCCCCCHHHHHHHHHHHHcCCC
Confidence 99999988776543211 111111111 3345788999999999997654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0014 Score=48.17 Aligned_cols=121 Identities=15% Similarity=0.062 Sum_probs=71.9
Q ss_pred cHHHHHHHHh----ccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSCA----KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~~----~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++. +. +..+||++||. ..+.... ....|+.||...+.+.+.++.+
T Consensus 109 g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asK~a~~~~~~~la~e~ 165 (244)
T 1zmo_A 109 FPILLLQSAIAPLRAA-GGASVIFITSS-VGKKPLA---------------------YNPLYGPARAATVALVESAAKTL 165 (244)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEEECCG-GGTSCCT---------------------TCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCcEEEEECCh-hhCCCCC---------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 4555666554 44 45789999998 4432110 0123999999999999888765
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccH--HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGA--EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|-.+-.... .... ......... ..+ ...+...+|+|+++..++.... ..| .+.+.|+
T Consensus 166 ~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~--~~p-~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 166 SRDGILLYAIGPNFFNNPTYFPT-SDWENNPELRERVDR--DVP-LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp GGGTEEEEEEEESSBCBTTTBCH-HHHHHCHHHHHHHHH--HCT-TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred hhcCcEEEEEeeCCCcCCccccc-ccccchHHHHHHHhc--CCC-CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 389999999999866532000 0000 111112110 011 1236789999999999987532 234 3445444
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0026 Score=47.58 Aligned_cols=101 Identities=18% Similarity=0.135 Sum_probs=63.0
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..++|++||.+...+. +. .....|+.||...+.+.+.++++.
T Consensus 124 g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~--------~~------------~~~~~Y~asKaal~~l~~~la~e~ 182 (274)
T 3e03_A 124 GSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPA--------WW------------GAHTGYTLAKMGMSLVTLGLAAEF 182 (274)
T ss_dssp HHHHHHHHHHHHHTTS-SSCEEEECCCCCCCCHH--------HH------------HHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc-CCceEEEECChHhcCCC--------CC------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence 345555555 334 44689999997333211 00 011349999999999999887653
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+++.+++|+.++..... ....+. ....+...+|+|+++..++...
T Consensus 183 ~~~gI~vn~v~PG~~v~T~~~-----------~~~~~~----~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 183 GPQGVAINALWPRTVIATDAI-----------NMLPGV----DAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp GGGTCEEEEEECSBCBCC------------------CC----CGGGSBCTHHHHHHHHHHHTSC
T ss_pred hhcCEEEEEEECCcccccchh-----------hhcccc----cccccCCHHHHHHHHHHHhCcc
Confidence 899999999954443211 111111 1123678999999999999753
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0011 Score=49.12 Aligned_cols=110 Identities=19% Similarity=0.186 Sum_probs=66.1
Q ss_pred cHHHHHHHHhcc---CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--
Q 027969 2 GTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-- 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-- 76 (216)
|+.++++++... .+..+||++||.++.++.. ....|+.||...+.+.+.++.+
T Consensus 119 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~~~~~la~e~~ 176 (262)
T 1zem_A 119 GAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------------------NMAAYGTSKGAIIALTETAALDLA 176 (262)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------------------TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------------------CCchHHHHHHHHHHHHHHHHHHHH
Confidence 445566655432 1446899999983433211 0134999999999988887754
Q ss_pred -cCCcEEEEcCCCccCCCCCCC------------CCccHH-HHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 -NGIDLVAIHPGTVIGPFFQPI------------LNFGAE-VILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.|+++.+++|+.|..+-.... ...... ....+... .| ...+...+|+|+++..++..
T Consensus 177 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~p~dvA~~v~~l~s~ 247 (262)
T 1zem_A 177 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS---VP-MRRYGDINEIPGVVAFLLGD 247 (262)
T ss_dssp GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT---ST-TSSCBCGGGSHHHHHHHHSG
T ss_pred hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCc
Confidence 389999999999865431100 000011 11111111 12 12367899999999999864
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.006 Score=47.29 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=70.5
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||. ..+... +. . ....|+.||...+.+.+.++.+.
T Consensus 163 g~~~l~~~~lp~m~~~-~~g~IV~iSS~-~~~~~~-------~~------~------~~~~Y~aSKaal~~l~~~la~e~ 221 (346)
T 3kvo_A 163 GTYLASKACIPYLKKS-KVAHILNISPP-LNLNPV-------WF------K------QHCAYTIAKYGMSMYVLGMAEEF 221 (346)
T ss_dssp HHHHHHHHHHHHHTTC-SSCEEEEECCC-CCCCGG-------GT------S------SSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHC-CCCEEEEECCH-HHcCCC-------CC------C------CchHHHHHHHHHHHHHHHHHHHh
Confidence 456666666 344 55799999997 333110 00 0 11349999999999999988764
Q ss_pred --CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC-CCceEEEecC
Q 027969 78 --GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASGRYLLAGS 149 (216)
Q Consensus 78 --~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~~ 149 (216)
++.+.++.|+.++... +... ..+.. ....+...+|+|++++.++.... ..|.+++.++
T Consensus 222 ~~gIrvn~v~PG~~i~T~----------~~~~-~~~~~---~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdgg 282 (346)
T 3kvo_A 222 KGEIAVNALWPKTAIHTA----------AMDM-LGGPG---IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDEN 282 (346)
T ss_dssp TTTCEEEEEECSBCBCCH----------HHHH-HCC-----CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred cCCcEEEEEeCCCccccH----------HHHh-hcccc---ccccCCCHHHHHHHHHHHHhcCCCCCceEEECCc
Confidence 7999999999644322 1222 22210 11236679999999999997621 2444544443
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0011 Score=50.88 Aligned_cols=108 Identities=19% Similarity=0.132 Sum_probs=69.4
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 76 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~- 76 (216)
|+.++++++ ++. +..+||++||.+..++... ...|+.||...+.+.+.++++
T Consensus 126 g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~~~~~~----------------------~~~Y~aSK~a~~~~~~~la~el 182 (319)
T 1gz6_A 126 GSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNFG----------------------QANYSAAKLGLLGLANTLVIEG 182 (319)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECChhhccCCCC----------------------CHHHHHHHHHHHHHHHHHHHHh
Confidence 444555554 444 4579999999856664321 134999999999999998775
Q ss_pred --cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC-CCc-eEEEecC
Q 027969 77 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG-RYLLAGS 149 (216)
Q Consensus 77 --~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~~ 149 (216)
.|+++.+++|+.+ .+-... .... ....+++.+|+|.+++.++..+. ..| .|.+.|+
T Consensus 183 ~~~gI~vn~v~PG~~-t~~~~~---~~~~-------------~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 183 RKNNIHCNTIAPNAG-SRMTET---VMPE-------------DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp GGGTEEEEEEEEECC-STTTGG---GSCH-------------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred cccCEEEEEEeCCCc-cccccc---cCCh-------------hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 3899999999987 321110 0000 01124578999999999986532 234 4555443
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.018 Score=42.38 Aligned_cols=109 Identities=16% Similarity=0.066 Sum_probs=67.6
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVA 83 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i 83 (216)
++....+. + .++|.+||.++..+.+. . ..|+.||.....+.+.++.+. ++++-.
T Consensus 117 ~~~~m~~~-~-G~IInisS~~~~~~~~~--------------~--------~~Y~asKaal~~ltk~lA~ela~~IrVN~ 172 (247)
T 3ged_A 117 CRDELIKN-K-GRIINIASTRAFQSEPD--------------S--------EAYASAKGGIVALTHALAMSLGPDVLVNC 172 (247)
T ss_dssp HHHHHHHT-T-CEEEEECCGGGTSCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHhhc-C-CcEEEEeecccccCCCC--------------C--------HHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 33444444 3 58999999844332211 1 349999999999988887754 789999
Q ss_pred EcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 84 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
|-|+.|--+.... .. ...... +| ..-+...+|+|.++.+++......| ...+.|+
T Consensus 173 I~PG~i~t~~~~~---~~----~~~~~~---~P-l~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG 228 (247)
T 3ged_A 173 IAPGWINVTEQQE---FT----QEDCAA---IP-AGKVGTPKDISNMVLFLCQQDFITGETIIVDGG 228 (247)
T ss_dssp EEECSBCCCC------CC----HHHHHT---ST-TSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred EecCcCCCCCcHH---HH----HHHHhc---CC-CCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence 9999985433211 11 111111 22 1125578999999999997665666 4444443
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.019 Score=42.47 Aligned_cols=109 Identities=19% Similarity=0.030 Sum_probs=67.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++.++..+.+. +-.++|++||.++..+... ...|+.||.....+.+..+.+. |+
T Consensus 124 ~~~~~p~m~~~-~~G~IVnisS~~g~~~~~~----------------------~~~Y~asKaal~~ltr~lA~ela~~gI 180 (254)
T 4fn4_A 124 SRAVIPIMLKQ-GKGVIVNTASIAGIRGGFA----------------------GAPYTVAKHGLIGLTRSIAAHYGDQGI 180 (254)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCGGGTCSSSS----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHHc-CCcEEEEEechhhcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHhhhhCe
Confidence 34455555555 3368999999844443211 1349999999999988887653 89
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++-.|-|+.|--+-................+..+.. .-+...+|+|.++.+++..
T Consensus 181 rVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~R~g~pediA~~v~fLaSd 235 (254)
T 4fn4_A 181 RAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS---SRLAEPEDIANVIVFLASD 235 (254)
T ss_dssp EEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC---CCCBCHHHHHHHHHHHHSG
T ss_pred EEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC---CCCcCHHHHHHHHHHHhCc
Confidence 999999999966532221111222222222111111 1245689999999999864
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.046 Score=40.03 Aligned_cols=105 Identities=17% Similarity=0.100 Sum_probs=65.4
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~ 93 (216)
.++|.+||+++..+... . ..|+.||.....+.+..+.+. |+++-.|-|+.|--+-
T Consensus 127 G~IVnisS~~~~~~~~~--------------~--------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m 184 (242)
T 4b79_A 127 GSILNIASMYSTFGSAD--------------R--------PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPL 184 (242)
T ss_dssp EEEEEECCGGGTSCCSS--------------C--------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-
T ss_pred CeEEEEeeccccCCCCC--------------C--------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChh
Confidence 58999999844443221 1 349999999999998887653 8999999999996653
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
..... ........+.+. .| ..-+...+|+|.++.+++... ...| ...+.|
T Consensus 185 ~~~~~-~~~~~~~~~~~~---~P-lgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDG 237 (242)
T 4b79_A 185 GAGLK-ADVEATRRIMQR---TP-LARWGEAPEVASAAAFLCGPGASFVTGAVLAVDG 237 (242)
T ss_dssp ----C-CCHHHHHHHHHT---CT-TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhccc-CCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence 32211 222333333333 22 112566899999999998542 2344 344444
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0044 Score=50.85 Aligned_cols=124 Identities=12% Similarity=-0.031 Sum_probs=80.0
Q ss_pred cHHHHHHHHhccC---C-ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~~---~-~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.+|.+++.... + ..+||++||+++++|... ...|+.+|...+.+..++. ..
T Consensus 376 g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g----------------------~~~YaaaKa~l~~lA~~~~-~~ 432 (525)
T 3qp9_A 376 AALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAG----------------------QGAYAAGTAFLDALAGQHR-AD 432 (525)
T ss_dssp HHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTT----------------------CHHHHHHHHHHHHHHTSCC-SS
T ss_pred HHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCC----------------------CHHHHHHHHHHHHHHHHHH-hC
Confidence 6788888887762 1 678999999866665421 1349999999998876553 34
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCHHHHH
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDIL 157 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~ 157 (216)
|+++++|.|+.+ +.+.... . .....+.. .....+..+++++++..++..+.. .+ .-..+.|..+.
T Consensus 433 gi~v~sI~pG~~-~tgm~~~--~--~~~~~~~~------~g~~~l~pee~a~~l~~~l~~~~~---~v-~v~~~dw~~~~ 497 (525)
T 3qp9_A 433 GPTVTSVAWSPW-EGSRVTE--G--ATGERLRR------LGLRPLAPATALTALDTALGHGDT---AV-TIADVDWSSFA 497 (525)
T ss_dssp CCEEEEEEECCB-TTSGGGS--S--HHHHHHHH------TTBCCBCHHHHHHHHHHHHHHTCS---EE-EECCBCHHHHH
T ss_pred CCCEEEEECCcc-ccccccc--h--hhHHHHHh------cCCCCCCHHHHHHHHHHHHhCCCC---eE-EEEeCCHHHHH
Confidence 899999999999 4332211 0 11111111 133567899999999999976431 11 12345677776
Q ss_pred HHHHHh
Q 027969 158 KFLREH 163 (216)
Q Consensus 158 ~~i~~~ 163 (216)
..+...
T Consensus 498 ~~~~~~ 503 (525)
T 3qp9_A 498 PGFTTA 503 (525)
T ss_dssp HHHHSS
T ss_pred hhcccc
Confidence 666543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0052 Score=46.98 Aligned_cols=126 Identities=16% Similarity=0.043 Sum_probs=58.2
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
|+.++++++... ..-.+||++||.++..+... . ...|+.||...+.+.+.++.+
T Consensus 169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~--------------~-------~~~Y~asKaal~~l~~~la~el~~~ 227 (319)
T 2ptg_A 169 SFVSLLQHFLPLMKEGGSALALSYIASEKVIPG--------------Y-------GGGMSSAKAALESDCRTLAFEAGRA 227 (319)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCceEEEEeccccccccCc--------------c-------chhhHHHHHHHHHHHHHHHHHhccc
Confidence 566777777653 11158999999733332110 0 013999999999988887654
Q ss_pred cCCcEEEEcCCCccCCCCCCCCCc-cHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 77 NGIDLVAIHPGTVIGPFFQPILNF-GAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
.|+++.+++|+.|..+-....... ...+........ ...+ ...+...+|+|++++.++... ...| .+.+.|+
T Consensus 228 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 304 (319)
T 2ptg_A 228 RAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAP-LQKELESDDVGRAALFLLSPLARAVTGATLYVDNG 304 (319)
T ss_dssp HCCEEEEEEECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 489999999999976532110000 000000000000 0011 113568999999999998642 3345 4445444
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.008 Score=44.38 Aligned_cols=110 Identities=16% Similarity=0.072 Sum_probs=66.1
Q ss_pred cHHHHHHHHhcc---C--CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV---H--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~---~--~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+.++++++... . +..+||++||. ..+.... +...|+.||...+.+.+.++.+
T Consensus 129 g~~~l~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e 186 (259)
T 1oaa_A 129 SMLCLTSGTLNAFQDSPGLSKTVVNISSL-CALQPYK---------------------GWGLYCAGKAARDMLYQVLAAE 186 (259)
T ss_dssp HHHHHHHHHHHTSCCCTTCEEEEEEECCG-GGTSCCT---------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCceEEEEcCc-hhcCCCC---------------------CccHHHHHHHHHHHHHHHHHhh
Confidence 566777777542 1 24579999998 4442110 1134999999999999999877
Q ss_pred c-CCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 77 N-GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 77 ~-~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
. ++++.+++|+.|-.+-...... ........+... . ....+.+.+|+|++++.++..
T Consensus 187 ~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---~-p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 187 EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL---K-SDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH---H-HTTCSBCHHHHHHHHHHHHHH
T ss_pred CCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHh---h-hcCCcCCHHHHHHHHHHHHhh
Confidence 5 4888999999884331100000 000000111000 0 122467899999999998863
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.048 Score=40.20 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=66.6
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.++..+.+. ...|+.||...+.+.+.++.+ +|+++..|.|+.|--+.
T Consensus 140 G~IVnisS~~~~~~~~~----------------------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 197 (256)
T 4fs3_A 140 GSIVATTYLGGEFAVQN----------------------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLS 197 (256)
T ss_dssp EEEEEEECGGGTSCCTT----------------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred CEEEEEeccccccCccc----------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChh
Confidence 58999999844443221 134999999999998888765 38999999999986654
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
.... .........+.... | ..-+...+|+|.++.+++... ...| ...+.|
T Consensus 198 ~~~~-~~~~~~~~~~~~~~---P-l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDG 250 (256)
T 4fs3_A 198 AKGV-GGFNTILKEIKERA---P-LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDS 250 (256)
T ss_dssp GTTC-TTHHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hhhc-cCCHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence 3321 12233333333321 2 112556899999999998542 2344 344444
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.022 Score=42.56 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=70.4
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+..+++++... .+-.++|.+||.++..+.+. . ..|+.||.....+.+.++.+.
T Consensus 137 g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~--------------~--------~~Y~asKaav~~ltr~lA~Ela~~ 194 (273)
T 4fgs_A 137 GVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA--------------F--------SVYAASKAALRSFARNWILDLKDR 194 (273)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC--------------c--------hHHHHHHHHHHHHHHHHHHHhccc
Confidence 455566666542 22257999999844433211 1 349999999999999988764
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccH----HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGA----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
|+++-.|-||.|--+.......... .+...+... +| ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 195 gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~P-lgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG 269 (273)
T 4fgs_A 195 GIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQ---VP-MGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269 (273)
T ss_dssp CEEEEEEEECSBCC---------CHHHHHHHHHHHHHH---ST-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence 7999999999997654322111111 122222221 12 112556899999999999642 3344 3444443
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0096 Score=44.25 Aligned_cols=122 Identities=12% Similarity=0.066 Sum_probs=71.2
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--- 77 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 77 (216)
|+.++++++... ..-.++|++||. ..++... ...|+.||...+.+.+.++.+.
T Consensus 126 g~~~l~~~~~~~~~~~g~iv~iss~-~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~ 182 (269)
T 2h7i_A 126 SYASMAKALLPIMNPGGSIVGMDFD-PSRAMPA----------------------YNWMTVAKSALESVNRFVAREAGKY 182 (269)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECC-CSSCCTT----------------------THHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhccCCeEEEEcCc-cccccCc----------------------hHHHHHHHHHHHHHHHHHHHHhccc
Confidence 566778877653 112589999987 3332110 1349999999999998887653
Q ss_pred CCcEEEEcCCCccCCCCCCC----CCc-cH----HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEE
Q 027969 78 GIDLVAIHPGTVIGPFFQPI----LNF-GA----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYL 145 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~----~~~-~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~ 145 (216)
|+++.+++|+.|..+-.... ... .. ......... .|-.+.+...+|+|+++..++... ...| .+.
T Consensus 183 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~ 259 (269)
T 2h7i_A 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR---APIGWNMKDATPVAKTVCALLSDWLPATTGDIIY 259 (269)
T ss_dssp TCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH---CTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEE
T ss_pred CcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc---CCcccCCCCHHHHHHHHHHHhCchhccCcceEEE
Confidence 89999999999865421100 000 00 001111111 121113667899999999999643 2344 344
Q ss_pred EecC
Q 027969 146 LAGS 149 (216)
Q Consensus 146 ~~~~ 149 (216)
+.|+
T Consensus 260 vdGG 263 (269)
T 2h7i_A 260 ADGG 263 (269)
T ss_dssp ESTT
T ss_pred ecCC
Confidence 4443
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.044 Score=40.51 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=64.9
Q ss_pred CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccC
Q 027969 15 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIG 91 (216)
Q Consensus 15 ~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G 91 (216)
+-.++|.+||.++..+.+. ...|+.||.....+.+.++.+. |+++-.|-|+.|.-
T Consensus 137 ~~G~IVnisS~~~~~~~~~----------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T 194 (255)
T 4g81_D 137 SGGKIINIGSLTSQAARPT----------------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILT 194 (255)
T ss_dssp CCEEEEEECCGGGTSBCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred CCCEEEEEeehhhcCCCCC----------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCC
Confidence 3358999999844332211 1349999999999988887653 89999999999965
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCc-eEEEecC
Q 027969 92 PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG-RYLLAGS 149 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~~~~~ 149 (216)
+-..... ....+...+... .| ..-+...+|+|.++.+++.. ....| .+.+.|+
T Consensus 195 ~~~~~~~-~~~~~~~~~~~~---~P-l~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 195 DMNTALI-EDKQFDSWVKSS---TP-SQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp GGGHHHH-TCHHHHHHHHHH---ST-TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chhhccc-CCHHHHHHHHhC---CC-CCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 4321100 001111111111 12 11256789999999999854 23344 4455444
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.078 Score=39.22 Aligned_cols=108 Identities=15% Similarity=0.205 Sum_probs=65.3
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|.+||.++..+... ...|+.||...+.+.+..+.+ +|+++-.|.|+.|--+-
T Consensus 133 G~IVnisS~~~~~~~~~----------------------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 133 GAIVNISSKTAVTGQGN----------------------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp CEEEEECCTHHHHCCSS----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred CeEEEEeehhhccCCCC----------------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 47999999855443321 134999999999999888765 38999999999996554
Q ss_pred CCCCCC---ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 94 FQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 94 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
...... ........+... +|-..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~---~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 191 YRNWIATFEDPEAKLAEIAAK---VPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG 249 (258)
T ss_dssp C-----------CHHHHHHTT---CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhhhhcccChHHHHHHHHhc---CCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence 321100 001112222222 121123667899999999998542 3344 4455443
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.016 Score=44.18 Aligned_cols=123 Identities=19% Similarity=0.040 Sum_probs=71.0
Q ss_pred cHHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 027969 2 GTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---- 76 (216)
Q Consensus 2 gt~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---- 76 (216)
|+.++++++... ..-.+||++||.++..+... . ...|+.||...+.+.+.++.+
T Consensus 156 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~--------------~-------~~~Y~asKaal~~l~~~la~el~~~ 214 (315)
T 2o2s_A 156 SFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPG--------------Y-------GGGMSSAKAALESDTRTLAWEAGQK 214 (315)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCTT--------------C-------CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecccccccCCC--------------c-------cHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 566777777653 11158999999733332110 0 013999999999998887654
Q ss_pred cCCcEEEEcCCCccCCCCCCC----CCcc-HHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCce-EEEec
Q 027969 77 NGIDLVAIHPGTVIGPFFQPI----LNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGR-YLLAG 148 (216)
Q Consensus 77 ~~~~~~ilR~~~v~G~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 148 (216)
.|+++.+++|+.|..+-.... .... ..+....... .+ ...+...+|+|+++++++... ...|. +.+.|
T Consensus 215 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 290 (315)
T 2o2s_A 215 YGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNN---AP-LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN 290 (315)
T ss_dssp TCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHH---SS-SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred cCeEEEEEecccccchhhhhccccccchhHHHHHHHHhcc---CC-CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence 489999999999965421000 0001 1111111111 11 112568899999999998642 23454 44444
Q ss_pred C
Q 027969 149 S 149 (216)
Q Consensus 149 ~ 149 (216)
+
T Consensus 291 G 291 (315)
T 2o2s_A 291 G 291 (315)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.058 Score=39.63 Aligned_cols=117 Identities=16% Similarity=0.071 Sum_probs=68.2
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+.+..+-.++|.+||.++..+... . ..|+.||.....+.+..+.+. |+++
T Consensus 120 ~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------------~--------~~Y~asKaav~~ltr~lA~Ela~~gIrV 177 (247)
T 4hp8_A 120 AFAKELLAKGRSGKVVNIASLLSFQGGIR--------------V--------PSYTAAKHGVAGLTKLLANEWAAKGINV 177 (247)
T ss_dssp HHHHHHHHHTCCEEEEEECCGGGTSCCSS--------------C--------HHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHHHHHHhCCCcEEEEEechhhCCCCCC--------------C--------hHHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 33443433322358999999844433211 1 239999999999988887654 8999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
-.|-|+.|--+-..... ........+.+. +| ..-+-..+|+|.++.+++... ...| .+.+.|
T Consensus 178 NaV~PG~i~T~~~~~~~-~~~~~~~~~~~~---~P-lgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDG 242 (247)
T 4hp8_A 178 NAIAPGYIETNNTEALR-ADAARNKAILER---IP-AGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDG 242 (247)
T ss_dssp EEEEECSBCSGGGHHHH-TSHHHHHHHHTT---CT-TSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred EEEeeCCCCCcchhhcc-cCHHHHHHHHhC---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECc
Confidence 99999999654321100 011112222222 23 112556899999999998642 2344 444444
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.047 Score=40.45 Aligned_cols=124 Identities=16% Similarity=0.105 Sum_probs=69.8
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||.++..+.+. ....|+.||...+.+.+..+.+ +|++
T Consensus 120 ~~~~p~m~~~-~~G~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~lt~~lA~Ela~~gIr 177 (261)
T 4h15_A 120 RQLVPDMVAR-GSGVVVHVTSIQRVLPLPE---------------------STTAYAAAKAALSTYSKAMSKEVSPKGVR 177 (261)
T ss_dssp HHHHHHHHHH-TCEEEEEECCGGGTSCCTT---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred Hhhchhhhhc-CCceEEEEEehhhccCCCC---------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 3444444444 3368999999844433211 0134999999999998888765 3899
Q ss_pred EEEEcCCCccCCCCCCC-------CCccHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..|.|+.|--+..... ............... ..+| ..-+...+|+|.++.+++... ...| .+.+.|+
T Consensus 178 VN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-lgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG 256 (261)
T 4h15_A 178 VVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIP-LGRPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256 (261)
T ss_dssp EEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCC-CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence 99999999854321000 000000001111100 1122 112667899999999998542 2344 4555555
Q ss_pred C
Q 027969 150 V 150 (216)
Q Consensus 150 ~ 150 (216)
.
T Consensus 257 ~ 257 (261)
T 4h15_A 257 T 257 (261)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.025 Score=47.29 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=62.3
Q ss_pred cHHHHHHHH----hccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSC----AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~----~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.++++++ ++. +..+||++||.++.++... ...|+.||...+.+.+.++.+.
T Consensus 136 g~~~l~~~~~p~m~~~-~~g~IV~isS~a~~~~~~~----------------------~~~Y~asKaal~~lt~~la~e~ 192 (613)
T 3oml_A 136 GSFKCTQAAFPYMKKQ-NYGRIIMTSSNSGIYGNFG----------------------QVNYTAAKMGLIGLANTVAIEG 192 (613)
T ss_dssp HHHHHHHHHHHHHHTT-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHh
Confidence 455566655 444 4568999999866664321 1349999999999999887654
Q ss_pred ---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC
Q 027969 78 ---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+.+.++.|+.+ .+-.. + ..+ .....+..+|+|.++..++...
T Consensus 193 ~~~gI~vn~v~Pg~~-t~~~~---------------~--~~~~~~~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 193 ARNNVLCNVIVPTAA-SRMTE---------------G--ILPDILFNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp GGGTEEEEEEEEC-------C---------------C--CCCHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred CccCeEEEEEECCCC-Chhhh---------------h--ccchhhhhcCCHHHHHHHHHHhcCCC
Confidence 899999999854 11100 0 011 1122347899999999988654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=94.62 E-value=0.099 Score=40.01 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=47.0
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 76 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--- 76 (216)
|+..+++++... .+ .++|++||.++..+... .. ..|+.||...+.+.+.++.+
T Consensus 149 g~~~l~~~~~p~m~~~-g~Iv~isS~~~~~~~~~--------------~~-------~~Y~asKaal~~~~~~la~el~~ 206 (329)
T 3lt0_A 149 SLISLCKYFVNIMKPQ-SSIISLTYHASQKVVPG--------------YG-------GGMSSAKAALESDTRVLAYHLGR 206 (329)
T ss_dssp HHHHHHHHHGGGEEEE-EEEEEEECGGGTSCCTT--------------CT-------TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-CeEEEEeCccccCCCCc--------------ch-------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 455666766553 12 58999999843332211 00 03999999999888876653
Q ss_pred -cCCcEEEEcCCCccCC
Q 027969 77 -NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 77 -~~~~~~ilR~~~v~G~ 92 (216)
.|+.+.++.||.|-.+
T Consensus 207 ~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 207 NYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHCCEEEEEEECCCCCH
T ss_pred ccCeEEEEEecceeech
Confidence 4899999999999654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.29 Score=42.29 Aligned_cols=105 Identities=14% Similarity=0.080 Sum_probs=68.3
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
.|+.+|.+++.. .. +||++||++++.|... ...|+.+|...+.+.++... .|++
T Consensus 644 ~G~~~l~~~~~~--~l-~iV~~SS~ag~~g~~g----------------------~~~YaAaka~~~alA~~~~~-~Gi~ 697 (795)
T 3slk_A 644 DGARNLLELIDP--DV-ALVLFSSVSGVLGSGG----------------------QGNYAAANSFLDALAQQRQS-RGLP 697 (795)
T ss_dssp CHHHHHHHHSCT--TS-EEEEEEETHHHHTCSS----------------------CHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHHHhh--CC-EEEEEccHHhcCCCCC----------------------CHHHHHHHHHHHHHHHHHHH-cCCe
Confidence 377888888843 44 8999999977765432 13499999888888776654 4999
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
+..|-|+.+-..+.... ........+.+ .....+..++...++..++..+.
T Consensus 698 v~sI~pG~v~t~g~~~~--~~~~~~~~~~~------~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 698 TRSLAWGPWAEHGMAST--LREAEQDRLAR------SGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp EEEEEECCCSCCCHHHH--HHHHHHHHHHH------TTBCCCCHHHHHHHHHHHHTSSC
T ss_pred EEEEECCeECcchhhcc--ccHHHHHHHHh------cCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999998865432100 00011111211 13345677888888888887643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=90.33 E-value=0.56 Score=39.14 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=58.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||.++.++... ...|+.||.....+.+.++.+ +|++
T Consensus 435 ~~~~p~m~~~-~~G~IVnisS~ag~~~~~~----------------------~~~Y~asKaal~~lt~~la~El~~~gIr 491 (604)
T 2et6_A 435 RLAWPYFVEK-QFGRIINITSTSGIYGNFG----------------------QANYSSSKAGILGLSKTMAIEGAKNNIK 491 (604)
T ss_dssp HHHHHHHHHT-TCEEEEEECCHHHHSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCCEEEEECChhhccCCCC----------------------ChhHHHHHHHHHHHHHHHHHHhCccCeE
Confidence 3344444444 3358999999855554321 134999999999988887765 4899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+..|.|+. ..... .... .. ........+|+|.++..++..
T Consensus 492 Vn~v~PG~--~T~m~------~~~~----~~-----~~~~~~~pe~vA~~v~~L~s~ 531 (604)
T 2et6_A 492 VNIVAPHA--ETAMT------LSIM----RE-----QDKNLYHADQVAPLLVYLGTD 531 (604)
T ss_dssp EEEEEECC--CCCC------------------------CCSSCGGGTHHHHHHTTST
T ss_pred EEEEcCCC--CCccc------cccC----ch-----hhccCCCHHHHHHHHHHHhCC
Confidence 99999972 21110 0000 00 112234789999999998864
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=1.1 Score=42.35 Aligned_cols=104 Identities=12% Similarity=0.039 Sum_probs=60.8
Q ss_pred cHHHHHHHHhccC-----CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHH-HHHHHH
Q 027969 2 GTLNVLRSCAKVH-----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEA-AWKFAK 75 (216)
Q Consensus 2 gt~~ll~~~~~~~-----~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~ 75 (216)
|+..+++++...+ +-.+||++||.++..+. . ..|+.||...+.+ .+.++.
T Consensus 801 g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~gg----------------~--------~aYaASKAAL~~Lttr~lA~ 856 (1887)
T 2uv8_A 801 RMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGG----------------D--------GMYSESKLSLETLFNRWHSE 856 (1887)
T ss_dssp HHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSSC----------------B--------TTHHHHHHHGGGHHHHHHHS
T ss_pred HHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccCC----------------C--------chHHHHHHHHHHHHHHHHHH
Confidence 3455666652221 22589999997433320 0 2399999999998 555554
Q ss_pred HcC--CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 76 ENG--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 76 ~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
..+ +.+..+.||+|-+.+........... .... ...+...+|+|++++.++...
T Consensus 857 ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~----~~~~-----plr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 857 SWANQLTVCGAIIGWTRGTGLMSANNIIAEG----IEKM-----GVRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp SCTTTEEEEEEEECCEECC-----CCTTHHH----HHTT-----SCCCEEHHHHHHHHHGGGSHH
T ss_pred HhCCCeEEEEEEecccccccccccchhHHHH----HHhc-----CCCCCCHHHHHHHHHHHhCCC
Confidence 332 88999999999753321110111111 1111 113458999999999998654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=88.56 E-value=0.75 Score=38.39 Aligned_cols=94 Identities=20% Similarity=0.023 Sum_probs=58.2
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||.++.++... ...|+.||.....+.+..+.+ +|++
T Consensus 131 ~a~~p~m~~~-~~G~IVnisS~ag~~~~~~----------------------~~~Y~asKaal~~lt~~la~El~~~gIr 187 (604)
T 2et6_A 131 KAAWPYFQKQ-KYGRIVNTSSPAGLYGNFG----------------------QANYASAKSALLGFAETLAKEGAKYNIK 187 (604)
T ss_dssp HHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCCEEEEECCHHHcCCCCC----------------------chHHHHHHHHHHHHHHHHHHHhCccCeE
Confidence 3344444444 3358999999856654321 134999999999999888765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+..|.|+ + .. .+.... .+ ........+|++.++..++...
T Consensus 188 Vn~v~Pg-~---~T--------~m~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 188 ANAIAPL-A---RS--------RMTESI------MPPPMLEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp EEEEEEC-C---CC--------HHHHTT------SCHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred EEEEccC-C---cC--------cccccc------CChhhhccCCHHHHHHHHHHHhCCc
Confidence 9999996 2 11 011000 00 0011246889999999888653
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=84.16 E-value=2.4 Score=40.09 Aligned_cols=88 Identities=10% Similarity=0.036 Sum_probs=55.0
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-c--CCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-N--GIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~ilR~~~v~G~~ 93 (216)
.+||++||.++.++. . ..|+.||...+.+...+..+ . ++.+..+.||++-|.+
T Consensus 796 G~IVnISS~ag~~gg----------------~--------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~ 851 (1878)
T 2uv9_A 796 QVILPLSPNHGTFGN----------------D--------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTG 851 (1878)
T ss_dssp EECCEECSCSSSSSC----------------C--------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTT
T ss_pred CEEEEEcchhhccCC----------------c--------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCc
Confidence 589999998444421 0 22999999999987765443 1 3899999999986333
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
... . ........... ...+...+|+|++++.++..
T Consensus 852 m~~---~-~~~~~~~~~~~-----plr~~sPeEVA~avlfLaSd 886 (1878)
T 2uv9_A 852 LMS---A-NNLVAEGVEKL-----GVRTFSQQEMAFNLLGLMAP 886 (1878)
T ss_dssp SCS---H-HHHTHHHHHTT-----TCCCBCHHHHHHHHHHHHSH
T ss_pred ccc---c-chhhHHHHHhc-----CCCCCCHHHHHHHHHHHhCC
Confidence 211 1 11111222211 11234799999999998864
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=81.47 E-value=0.9 Score=41.94 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHH-HHHHc--CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHh
Q 027969 59 YSLAKTLAEEAAWK-FAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 59 Y~~sK~~~E~~~~~-~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~ 134 (216)
|+.||...+.+... .++.. .+.+..+.||.|-|.+..... .... .... ....+...+|+|++++.+
T Consensus 640 YaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--------e~~~--~~l~~iplR~~sPEEVA~aIlFL 709 (1688)
T 2pff_A 640 YSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--------NIIA--EGIEKMGVRTFSQKEMAFNLLGL 709 (1688)
T ss_dssp HHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--------TTCS--TTTSSSSCCCCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--------hHHH--HHHHhCCCCCCCHHHHHHHHHHH
Confidence 99999999998433 33322 277888999988754321110 0000 1111 111344789999999999
Q ss_pred hcCC
Q 027969 135 LEVP 138 (216)
Q Consensus 135 ~~~~ 138 (216)
+...
T Consensus 710 aSd~ 713 (1688)
T 2pff_A 710 LTPE 713 (1688)
T ss_dssp TSTT
T ss_pred hCCC
Confidence 8654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 216 | ||||
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 3e-14 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-12 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-12 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-10 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 5e-10 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-08 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-05 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 0.004 |
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 68.3 bits (165), Expect = 3e-14
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE---------TPMTPDVVIDETWFSNPVL 51
GTLN LR+ A S+KR VLTSS + L+ + ID+
Sbjct: 109 GGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168
Query: 52 CKENKEWYSLAKTLAEEAAWKFAKENGI--DLVAIHPGTVIGPFFQPILNFGA--EVILN 107
+++ Y+ +KT AE AAWKF EN L A+ P IG F P G+ +++
Sbjct: 169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS 228
Query: 108 LINGDQSFAFP----YIFVEIRDVVYAHIRALEVPKASGRY-LLAGSVAQHSDILKFLRE 162
L NG+ S A +V D+ H+ L +P+ R + +L R+
Sbjct: 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRK 288
Query: 163 HYPTLLRSGKLEEK----YQPTIKVSQERAKSLGI-NFTPWEVGVRGCIES 208
YP+ ++ + S E KSLG + E ++ + S
Sbjct: 289 LYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 3e-12
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 18/152 (11%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
+GTLN+L +V R++L S+ E + P + Y
Sbjct: 94 IGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP------RACYD 145
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-----ILNFGAEVILN---LINGD 112
K +AE + + K+ G+++ GP + NF + + + G
Sbjct: 146 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS 205
Query: 113 QSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 144
S + +V D+V + + +S
Sbjct: 206 GSQTRAFQYVS--DLVNGLVALMNSNVSSPVN 235
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 61.4 bits (148), Expect = 5e-12
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 20/153 (13%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
GT +L+ + RVV S+ E+ P Y+
Sbjct: 105 QGTQTLLQCAVD-AGVGRVVHVSTNQVY-----GSIDSGSWTESSPLEPN------SPYA 152
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP---ILNFGAEVILN---LINGDQS 114
+K ++ A + + G+D+ GP+ P I F ++ + GD +
Sbjct: 153 ASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212
Query: 115 FAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147
++ + D L +A Y +
Sbjct: 213 NVREWVHTD--DHCRGIALVLAGGRAGEIYHIG 243
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 57.5 bits (138), Expect = 2e-10
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 19/163 (11%)
Query: 1 MGTLNVLRSCAKVHS--------IKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVL 51
+GT +L K S R S+ L + V +
Sbjct: 102 VGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAY 161
Query: 52 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP--ILNFGAEVILN-- 107
+ YS +K ++ + + G+ + + GP+ P ++ L
Sbjct: 162 APSS--PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGK 219
Query: 108 --LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 148
I G +++VE D A + KA Y + G
Sbjct: 220 PLPIYGKGDQIRDWLYVE--DHARALHMVVTEGKAGETYNIGG 260
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 55.7 bits (133), Expect = 5e-10
Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 60
M N++ + + + + +++ S P + E+ L N E Y+
Sbjct: 84 MIESNIIHAAHQ-NDVNKLLFLGSSCIY-----PKLAKQPMAESELLQGTLEPTN-EPYA 136
Query: 61 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 92
+AK + + ++ G D ++ P + GP
Sbjct: 137 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 51.7 bits (123), Expect = 1e-08
Identities = 30/215 (13%), Positives = 59/215 (27%), Gaps = 28/215 (13%)
Query: 1 MGTLNVLRSC--AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 58
MGTL +L + + R S+ + ++ ET P
Sbjct: 107 MGTLRLLEAIRFLGLEKKTRFYQASTSELY-----GLVQEIPQKETTPFYPRSP------ 155
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP----------FFQPILNFGAEVILNL 108
Y++AK A + + G+ P + I N + L
Sbjct: 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL 215
Query: 109 INGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL 168
G+ + +D V L+ + + + Q+S + +F+ L
Sbjct: 216 YLGNMDSLRDWGHA--KDYVKMQWMMLQQEQPEDFVI--ATGVQYS-VRQFVEMAAAQLG 270
Query: 169 RSGKLEEKYQPTIKVSQERAKSLGINFTPWEVGVR 203
+ E + P +V +
Sbjct: 271 IKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIA 305
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (99), Expect = 1e-05
Identities = 15/94 (15%), Positives = 26/94 (27%), Gaps = 13/94 (13%)
Query: 1 MGTLNVLRSC--AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 58
+GTL +L + + + + S+ ++ ET P
Sbjct: 108 VGTLRLLDAVKTCGLINSVKFYQASTSELY-----GKVQEIPQKETTPFYPR------SP 156
Query: 59 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 92
Y AK A F + + V P
Sbjct: 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP 190
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.2 bits (79), Expect = 0.004
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Query: 69 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVV 128
A ++ ++G I G ++ G L + D+ V DV
Sbjct: 156 KAEQYLADSGTPYTIIRAGGLLDKE-------GGVRELLVGKDDELLQTDTKTVPRADVA 208
Query: 129 YAHIRALEVPKASGRYLLAGSVAQHSDI 156
I+AL +A + GS + +
Sbjct: 209 EVCIQALLFEEAKNKAFDLGSKPEGTST 236
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 216 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.97 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.95 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.94 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.92 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.9 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.89 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.88 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.8 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.53 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.46 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.43 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.39 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.24 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.12 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.98 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.69 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.43 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.22 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.13 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.1 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.1 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.09 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.05 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.04 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.04 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 96.95 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.94 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 96.93 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 96.89 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.88 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 96.86 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.84 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.75 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.74 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.73 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 96.73 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 96.63 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.63 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.58 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.57 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 96.56 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 96.55 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.44 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.35 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.35 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.2 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.2 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.14 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 96.14 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.01 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.01 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 95.98 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 95.89 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 95.88 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.86 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 95.76 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 95.73 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 95.31 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 95.23 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 95.18 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 95.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 94.93 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 94.89 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 94.88 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 94.76 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 94.75 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 94.48 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 93.91 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 93.69 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 93.59 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 93.1 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 92.55 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 91.76 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 91.14 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 90.71 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 90.5 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 90.2 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 89.78 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 89.16 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 84.7 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=8.2e-36 Score=229.68 Aligned_cols=198 Identities=17% Similarity=0.184 Sum_probs=165.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ ++||... ..+++|+++..|. ++||.||..+|.+++.+.+++++++
T Consensus 106 gt~~ll~~~~~~-~~~~~I~~Ss~-~~yg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 173 (322)
T d1r6da_ 106 GTQTLLQCAVDA-GVGRVVHVSTN-QVYGSID----SGSWTESSPLEPN------SPYAASKAGSDLVARAYHRTYGLDV 173 (322)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGGCCCS----SSCBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHc-CCceEEEeecc-eeecCCC----CCCCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 789999999998 88999999997 9999876 6789999887765 5699999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSD 155 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e 155 (216)
+++||++||||++.+. ..++.++.++.+|+ ..++ ..++|+|++|+|+++..+++++..++.|+++ +..+++.|
T Consensus 174 ~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e 252 (322)
T d1r6da_ 174 RITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRE 252 (322)
T ss_dssp EEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHH
T ss_pred EEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHH
Confidence 9999999999987654 35678888888888 3344 4558999999999999999988777788666 78899999
Q ss_pred HHHHHHHhCCCCCCC-CC--CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 156 ILKFLREHYPTLLRS-GK--LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 156 l~~~i~~~~~~~~~~-~~--~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.+.+.++..... .. ..........+|++|+ +.|||+| ++++|+|+++++|++++
T Consensus 253 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 253 LTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp HHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999998643211 11 1133444577999999 7899999 89999999999999874
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-33 Score=215.02 Aligned_cols=202 Identities=17% Similarity=0.204 Sum_probs=159.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|++. ++ ++||+||+ +||+... ..+++|+..... .+..|.++|+.||+++|.+++.+++.+++++
T Consensus 95 g~~~ll~~~~~~-~~-k~I~~SS~-~vy~~~~----~~~~~e~~~~~~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~ 166 (312)
T d2b69a1 95 GTLNMLGLAKRV-GA-RLLLASTS-EVYGDPE----VHPQSEDYWGHV-NPIGPRACYDEGKRVAETMCYAYMKQEGVEV 166 (312)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGGBSCS----SSSBCTTCCCBC-CSSSTTHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHc-CC-cEEEEECh-heecCCC----CCCCCccccCCC-CCCCCccHHHHHHHHHHHHHHHHHHHhCCcE
Confidence 789999999998 76 79999997 9999865 567777643322 1223457799999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCC-ccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCCCCHH
Q 027969 82 VAIHPGTVIGPFFQPILN-FGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~ 154 (216)
+++||++||||+...... .++.++.++..|+ . .++ ..++|+|++|+++++..+++.. ..+.|+++ +..+++.
T Consensus 167 ~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~~~~n~~~~~~~~~~ 245 (312)
T d2b69a1 167 RVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEEHTIL 245 (312)
T ss_dssp EEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCEEEHH
T ss_pred EEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cCCceEecCCcccchh
Confidence 999999999998765432 4568888888888 3 333 4568999999999999998765 45667665 7889999
Q ss_pred HHHHHHHHhCCCCC-CC-CCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 155 DILKFLREHYPTLL-RS-GKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 155 el~~~i~~~~~~~~-~~-~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
++++.+++.++... +. ............+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 246 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 246 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp HHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999985432 11 111123345577899999 7899999 99999999999999764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.6e-33 Score=216.41 Aligned_cols=199 Identities=19% Similarity=0.135 Sum_probs=161.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.++ ++++|||+||. ++||... ..+++|+++..|. +.|+.||+++|+++..+.+..++++
T Consensus 121 gt~~ll~~~~~~-~~~~~i~~SS~-~vyg~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~i~~ 188 (341)
T d1sb8a_ 121 GFLNMLIAARDA-KVQSFTYAASS-STYGDHP----GLPKVEDTIGKPL------SPYAVTKYVNELYADVFSRCYGFST 188 (341)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGGTTCC----CSSBCTTCCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHhc-CCceEEEcccc-eeeCCCC----CCCccCCCCCCCC------CcchHHHHHHHHHHHHHHHHhCCCe
Confidence 799999999999 88999999997 9999876 7889999888776 5699999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCC---ccHHHHHHHHcCCC--CCC---CCCceeehhhhHHHHHHhhcCCCC--CceEEEe-cCC
Q 027969 82 VAIHPGTVIGPFFQPILN---FGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEVPKA--SGRYLLA-GSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~-~~~ 150 (216)
+++||++|||++..+... .+..++..+..|++ .++ ..++|+|++|+|.++..++..+.. ++.|+++ +..
T Consensus 189 ~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~ 268 (341)
T d1sb8a_ 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR 268 (341)
T ss_dssp EEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC
T ss_pred EEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeeccccc
Confidence 999999999998765432 34567788888882 333 456899999999999999876533 3478666 678
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCCc-------cCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 151 AQHSDILKFLREHYPTLLRSGKLE-------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~~~~~~~-------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+|+.|+++.+.+.++...+..... ........+|++|+ +.|||+| .+++++|+++++|+++.
T Consensus 269 ~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~~ 339 (341)
T d1sb8a_ 269 TSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 339 (341)
T ss_dssp EEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHh
Confidence 999999999999885332221111 22334567899999 7799999 99999999999999873
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.8e-32 Score=212.55 Aligned_cols=197 Identities=16% Similarity=0.082 Sum_probs=149.8
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.|||++|++. +++++|||+||+ +|||... ..+++|+++..|. ++|+.||+.+|++++.+++.+++
T Consensus 108 gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~----~~~~~E~~~~~P~------~~Y~~sK~~~E~~~~~~~~~~~l 176 (357)
T d1db3a_ 108 GTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ----EIPQKETTPFYPR------SPYAVAKLYAYWITVNYRESYGM 176 (357)
T ss_dssp HHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCC----CCCcCCCCCCCCC------ChHHHHHHHHHHHHHHHHHHhCC
Confidence 799999999886 244579999997 9998765 6789999877665 66999999999999999999999
Q ss_pred cEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CCC--C---CCCceeehhhhHHHHHHhhcCCCCCceEEEe-cCC
Q 027969 80 DLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QSF--A---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSV 150 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~~--~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~ 150 (216)
+++++||++||||...... ..+...+.....+. ..+ + ..++|+|++|+|+++..+++.. .++.|+++ ++.
T Consensus 177 ~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~-~~~~yni~sg~~ 255 (357)
T d1db3a_ 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE-QPEDFVIATGVQ 255 (357)
T ss_dssp CEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-SCCCEEECCCCC
T ss_pred CEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-CCCeEEECCCCc
Confidence 9999999999999754332 12334555555665 222 2 4458999999999999999865 35577655 888
Q ss_pred CCHHHHHHHHHHhCCCCCC--------------------CCCCc-------------cCCCCccccchHHH-HHhCCee-
Q 027969 151 AQHSDILKFLREHYPTLLR--------------------SGKLE-------------EKYQPTIKVSQERA-KSLGINF- 195 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~~--------------------~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~- 195 (216)
+|++|+++.+.+.++.... +.... +.......+|++|+ +.|||+|
T Consensus 256 ~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~ 335 (357)
T d1db3a_ 256 YSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPE 335 (357)
T ss_dssp EEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCC
T ss_pred eehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcC
Confidence 9999999999999852110 00000 11223346799999 7899999
Q ss_pred eehhhhHHHHHHHHH
Q 027969 196 TPWEVGVRGCIESLM 210 (216)
Q Consensus 196 ~~~~~~i~~~~~~~~ 210 (216)
++++|+|++++++..
T Consensus 336 ~sl~egI~~~I~~~l 350 (357)
T d1db3a_ 336 ITLREMVSEMVANDL 350 (357)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999986543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1.3e-31 Score=209.02 Aligned_cols=205 Identities=16% Similarity=0.170 Sum_probs=156.9
Q ss_pred cHHHHHHHHhccC--------CccEEEEcccccccccCCCCCCCCccccCCCCCCc----ccccccchhHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVH--------SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP----VLCKENKEWYSLAKTLAEEA 69 (216)
Q Consensus 2 gt~~ll~~~~~~~--------~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~----~~~~~~~~~Y~~sK~~~E~~ 69 (216)
||.+++++|++.. ++++|||+||+ ++||... ..+..|+....+ ..+..|.+.||.||+++|++
T Consensus 103 gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~----~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~ 177 (361)
T d1kewa_ 103 GTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLP----HPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177 (361)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCC----CGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhcccCceEEEEeccc-eeeCCCc----cCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHH
Confidence 7899999998751 34599999997 9998765 334333322211 11123447799999999999
Q ss_pred HHHHHHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceE
Q 027969 70 AWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRY 144 (216)
Q Consensus 70 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 144 (216)
++.+++.++++++++||++||||++... ..++.++.++.+|+ . .++ ..++|+|++|+|+++..++++...++.|
T Consensus 178 ~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ 256 (361)
T d1kewa_ 178 VRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETY 256 (361)
T ss_dssp HHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCCCCeE
Confidence 9999999999999999999999987653 25678888888888 2 333 4568999999999999999988777788
Q ss_pred EEe-cCCCCHHHHHHHHHHhCCC---CCCCC--CC-----ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHH
Q 027969 145 LLA-GSVAQHSDILKFLREHYPT---LLRSG--KL-----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 145 ~~~-~~~~s~~el~~~i~~~~~~---~~~~~--~~-----~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
|++ +...++.|+++.+.+.++. ..... .. .+.......+|++|+ +.|||+| ++++|+|+++++|+++
T Consensus 257 Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~ 336 (361)
T d1kewa_ 257 NIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336 (361)
T ss_dssp EECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHH
T ss_pred EECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Confidence 776 7789999999999987621 11010 00 023445678899999 7799999 9999999999999977
Q ss_pred c
Q 027969 212 K 212 (216)
Q Consensus 212 ~ 212 (216)
+
T Consensus 337 n 337 (361)
T d1kewa_ 337 N 337 (361)
T ss_dssp C
T ss_pred h
Confidence 5
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=1.8e-30 Score=199.43 Aligned_cols=199 Identities=16% Similarity=0.059 Sum_probs=153.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.++|++|++.+..++|++.||. .+|+... ....+|+++..|. ++|+.+|+++|+++..+++.+++++
T Consensus 102 g~~~~l~~~~~~~~~~~~i~~Ss~-~~~~~~~----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 170 (321)
T d1rpna_ 102 GVTHLLEAIRQFSPETRFYQASTS-EMFGLIQ----AERQDENTPFYPR------SPYGVAKLYGHWITVNYRESFGLHA 170 (321)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEEG-GGGCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred chHHHHHHHHHhCCCcccccccch-hhcCccc----CCCCCCCCCcccc------ChhHHHHHHHHHHHHHHHhhcCCcE
Confidence 789999999998445578888886 8998766 6777898877765 5699999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CCC--C---CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCCCH
Q 027969 82 VAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QSF--A---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~~--~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~ 153 (216)
+++||+++|||...... +.+..++.+...++ +.+ + ..++|+|++|+|+++.++++++..+..++++++..++
T Consensus 171 ~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~ni~~~~~~s~ 250 (321)
T d1rpna_ 171 SSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKADDYVVATGVTTTV 250 (321)
T ss_dssp EEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSCCCEEECCSCEEEH
T ss_pred EEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCcCCceeccccccee
Confidence 99999999999765432 12345555666665 332 3 3458999999999999999887543334555888999
Q ss_pred HHHHHHHHHhCCCCC--C---CCC-CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHH
Q 027969 154 SDILKFLREHYPTLL--R---SGK-LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 154 ~el~~~i~~~~~~~~--~---~~~-~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
.++++.+.+.++... + ... ..+........|++|+ +.|||+| ++++|+|+++++|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 251 RDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp HHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 999999999885431 1 110 0123344567899999 7799999 9999999999999765
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=1.6e-30 Score=203.02 Aligned_cols=204 Identities=14% Similarity=0.085 Sum_probs=150.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCC-cccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN-PVLCKENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+|+++|+++ ++++|||+||+ .+|+... ..+.+|+.... ...+..|.++|+.||+++|++++.+.+.++++
T Consensus 110 gt~~ll~~~~~~-~vk~~i~~SS~-~~~~~~~----~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~ 183 (363)
T d2c5aa1 110 ISFNMIEAARIN-GIKRFFYASSA-CIYPEFK----QLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIE 183 (363)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEEEG-GGSCGGG----SSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred hhhHHHHhHHhh-Ccccccccccc-ccccccc----cccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 789999999999 99999999997 9998764 34444442222 22223345779999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcc---HHHHHH-HHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCceEEE-ecCC
Q 027969 81 LVAIHPGTVIGPFFQPILNFG---AEVILN-LINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLL-AGSV 150 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~---~~~~~~-~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~ 150 (216)
++++||++|||+++....... ...... ..... ..++ ..++|+|++|+++++..+++.. .++.|++ ++..
T Consensus 184 ~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~~~~~ni~~~~~ 262 (363)
T d2c5aa1 184 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEM 262 (363)
T ss_dssp EEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCC
T ss_pred EEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-CCCeEEEecCCc
Confidence 999999999999865432212 122222 22222 2222 3558999999999999998765 4567755 4889
Q ss_pred CCHHHHHHHHHHhCCCCC-CCCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 151 AQHSDILKFLREHYPTLL-RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 151 ~s~~el~~~i~~~~~~~~-~~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
+++.|+++++.+..+... +.............+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 263 ~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~ 327 (363)
T d2c5aa1 263 VSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327 (363)
T ss_dssp EEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999885432 11111123345567899999 7899999 99999999999999764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.9e-30 Score=196.49 Aligned_cols=205 Identities=13% Similarity=0.131 Sum_probs=151.3
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
||.+|+++|.+. ++++|||+||+ ++||... ..+++|+.+..... ..+.++|+.||+++|++++.+++++++++
T Consensus 85 gt~~ll~~a~~~-~v~~~i~~SS~-~vyg~~~----~~~~~E~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~ 157 (315)
T d1e6ua_ 85 IESNIIHAAHQN-DVNKLLFLGSS-CIYPKLA----KQPMAESELLQGTL-EPTNEPYAIAKIAGIKLCESYNRQYGRDY 157 (315)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCG-GGSCTTC----CSSBCGGGTTSSCC-CGGGHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEECCc-eEcCCCC----CCCccCCccccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 799999999999 99999999997 9998765 56788875544321 12345699999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCC--cc-H-----HHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCC---------
Q 027969 82 VAIHPGTVIGPFFQPILN--FG-A-----EVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPK--------- 139 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~--~~-~-----~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~--------- 139 (216)
+++||++||||++..... .. . ........+. ...+ ..++|+|++|+++++..++....
T Consensus 158 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~ 237 (315)
T d1e6ua_ 158 RSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQP 237 (315)
T ss_dssp EEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBT
T ss_pred EEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccc
Confidence 999999999998654321 11 1 1122233343 2222 34689999999999999986532
Q ss_pred CCceEEE-ecCCCCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccchHHHHHhCCee-eehhhhHHHHHHHHHHcC
Q 027969 140 ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 140 ~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~~~~~~~~ 213 (216)
..+.++. ++...++.++++.+.+.++........ .+.......+|++|+++|||+| ++++|+|+++++|++++.
T Consensus 238 ~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 238 MLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp TBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred cccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1224554 477899999999999987543211110 1223344578999998899999 999999999999999763
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=8.9e-30 Score=197.53 Aligned_cols=201 Identities=15% Similarity=0.153 Sum_probs=153.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCC--------CCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP--------MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 73 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~--------~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 73 (216)
||.||+++|... +. ++|++||+ .+||.... ..+....+|+++..| .+.||.+|+++|++++.+
T Consensus 103 g~~nll~~~~~~-~~-k~i~~ss~-~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p------~s~Y~~sK~~~E~~~~~~ 173 (346)
T d1oc2a_ 103 GTYTLLEAARKY-DI-RFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETNYNP------SSPYSSTKAASDLIVKAW 173 (346)
T ss_dssp HHHHHHHHHHHH-TC-EEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC------CSHHHHHHHHHHHHHHHH
T ss_pred hHHhhhhhhccc-cc-cccccccc-eEecccCccccccccccCcccccccCCCCCC------CCHHHHHHHHHHHHHHHH
Confidence 799999999998 64 79999997 99975310 011233444444443 367999999999999999
Q ss_pred HHHcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCCCCceEE-Ee
Q 027969 74 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYL-LA 147 (216)
Q Consensus 74 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~-~~ 147 (216)
++..+++++++||++||||..... .....++.....|. . .++ ..++|+|++|+|+++..+++.+..++.|+ ++
T Consensus 174 ~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~ 252 (346)
T d1oc2a_ 174 VRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGA 252 (346)
T ss_dssp HHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECC
T ss_pred HHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcccCccccccc
Confidence 998899999999999999976543 25566777777777 3 333 55679999999999999999888788765 45
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccchHHH-HHhCCee-e-ehhhhHHHHHHHHHHc
Q 027969 148 GSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIESLMEK 212 (216)
Q Consensus 148 ~~~~s~~el~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~~-~-~~~~~i~~~~~~~~~~ 212 (216)
++..++.++++.+.+.++......... ........+|++|+ +.|||+| . +++++|+++++|++++
T Consensus 253 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 253 DGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp SCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred cccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 888999999999999986543222111 22334567899999 7899999 4 6999999999999875
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.5e-29 Score=194.96 Aligned_cols=198 Identities=15% Similarity=0.012 Sum_probs=146.3
Q ss_pred cHHHHHHHHhcc--CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 027969 2 GTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~--~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 79 (216)
||.+|+++|+++ .++++|||+||+ +|||... ..+++|+++..|. ++||.||+++|++++.+.+.+++
T Consensus 109 gt~~ll~~~~~~~~~~~~~~i~~SS~-~vyg~~~----~~~~~E~~~~~P~------~~Yg~sK~~aE~~~~~~~~~~~~ 177 (347)
T d1t2aa_ 109 GTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQ----EIPQKETTPFYPR------SPYGAAKLYAYWIVVNFREAYNL 177 (347)
T ss_dssp HHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCS----SSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCCcEEEEecch-heecCCC----CCCCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHhCC
Confidence 799999999986 133589999997 9999765 6789999887765 66999999999999999998899
Q ss_pred cEEEEcCCCccCCCCCCCCC--ccHH-HHHHHHcCCC--CCC---CCCceeehhhhHHHHHHhhcCCCCCceEEEecCCC
Q 027969 80 DLVAIHPGTVIGPFFQPILN--FGAE-VILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVA 151 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~--~~~~-~~~~~~~~~~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~ 151 (216)
+++++||++||||....... .... ++.....+.+ .++ ..++|+|++|+++++..++++......++..+...
T Consensus 178 ~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~ 257 (347)
T d1t2aa_ 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVH 257 (347)
T ss_dssp EEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSCCCEEECCSCCE
T ss_pred CEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCCccceecccccc
Confidence 99999999999997554321 1112 2222323332 222 34589999999999999998865433444557788
Q ss_pred CHHHHHHHHHHhCCCCCCCCCC---c--------------------cCCCCccccchHHH-HHhCCee-eehhhhHHHHH
Q 027969 152 QHSDILKFLREHYPTLLRSGKL---E--------------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~~~~~~---~--------------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~ 206 (216)
++.+....+...++........ . +.......+|++|+ +.|||+| ++++|+|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I 337 (347)
T d1t2aa_ 258 SVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMV 337 (347)
T ss_dssp EHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred ccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHH
Confidence 9999999998887543100000 0 11223456799999 7799999 99999999998
Q ss_pred HHHH
Q 027969 207 ESLM 210 (216)
Q Consensus 207 ~~~~ 210 (216)
++..
T Consensus 338 ~~~~ 341 (347)
T d1t2aa_ 338 HADV 341 (347)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=6.7e-28 Score=186.55 Aligned_cols=207 Identities=18% Similarity=0.219 Sum_probs=153.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccc-cccchhHHHHHHHHHHHHHHHHHHcCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC-KENKEWYSLAKTLAEEAAWKFAKENGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 80 (216)
||.+++++|.+. ++ ++++.||+ .+|+... ....+|..+..+..+ ..|.+.|+.||.++|++++.+.+.++++
T Consensus 97 gt~~ll~~~~~~-~~-~~~~~ss~-~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~ 169 (342)
T d2blla1 97 ENLRIIRYCVKY-RK-RIIFPSTS-EVYGMCS----DKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 169 (342)
T ss_dssp HHHHHHHHHHHT-TC-EEEEECCG-GGGBTCC----CSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cccccccccccc-cc-cccccccc-ccccccc----ccccccccccccccccCCCcchhhhcccchhhhhhhhhcccCce
Confidence 799999999998 76 56788886 8888765 455555544333222 2344669999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCC-------CccHHHHHHHHcCC-C-CCC---CCCceeehhhhHHHHHHhhcCCC--C-CceEE
Q 027969 81 LVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVPK--A-SGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~~--~-~~~~~ 145 (216)
++++|++.+||+...... .....++.++..|+ . .++ ..++|+|++|+|+++..+++.+. . +..||
T Consensus 170 ~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~N 249 (342)
T d2blla1 170 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIIN 249 (342)
T ss_dssp EEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEE
T ss_pred eEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEE
Confidence 999999999998754422 12357778888888 3 333 45579999999999999998742 2 33787
Q ss_pred Ee-cC-CCCHHHHHHHHHHhCCCCC----CCCCCc-------------cCCCCccccchHHH-HHhCCee-eehhhhHHH
Q 027969 146 LA-GS-VAQHSDILKFLREHYPTLL----RSGKLE-------------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 204 (216)
Q Consensus 146 ~~-~~-~~s~~el~~~i~~~~~~~~----~~~~~~-------------~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~ 204 (216)
++ ++ .+|+.|+++.+.+.++... ++.... ........+|++|+ +.|||+| .+++|+|++
T Consensus 250 ig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ 329 (342)
T d2blla1 250 IGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDE 329 (342)
T ss_dssp ECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred EecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHCCCcCCCHHHHHHH
Confidence 75 54 4799999999999874321 221111 11223446799999 7899999 999999999
Q ss_pred HHHHHHHcCCC
Q 027969 205 CIESLMEKGFL 215 (216)
Q Consensus 205 ~~~~~~~~~~l 215 (216)
+++|++++..|
T Consensus 330 ti~~y~~~~~~ 340 (342)
T d2blla1 330 TLDFFLRTVDL 340 (342)
T ss_dssp HHHHHHHHSCT
T ss_pred HHHHHHhCcCC
Confidence 99999887654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=2e-27 Score=183.91 Aligned_cols=206 Identities=30% Similarity=0.371 Sum_probs=149.1
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCc----------ccccccchhHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP----------VLCKENKEWYSLAKTLAEEAAW 71 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~----------~~~~~~~~~Y~~sK~~~E~~~~ 71 (216)
||.++|++|.+.+++++|||+||++++++..+ .......+|+.+... ..+..+.++|+.||..+|++++
T Consensus 110 gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~ 188 (342)
T d1y1pa1 110 GTLNALRAAAATPSVKRFVLTSSTVSALIPKP-NVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188 (342)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCGGGTCCCCT-TCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhhhcccccccccccccceeeccCCC-CCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHH
Confidence 79999999998768999999999844443322 122334444443211 1122344669999999999999
Q ss_pred HHHHHc--CCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CCCC---CCCceeehhhhHHHHHHhhcCCCCCc-
Q 027969 72 KFAKEN--GIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASG- 142 (216)
Q Consensus 72 ~~~~~~--~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~- 142 (216)
.+.+.+ +++++++||+.+|||...+.. .....++..+.+|. .... +.++|+|++|+|++++.+++++...+
T Consensus 189 ~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~ 268 (342)
T d1y1pa1 189 KFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERR 268 (342)
T ss_dssp HHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSC
T ss_pred HhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccccce
Confidence 998875 578899999999999764432 23467777888887 3222 56679999999999999999887777
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCCCccCCCCcccc----chHHHHHhCCee-eehhhhHHHHHHH
Q 027969 143 RYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKV----SQERAKSLGINF-TPWEVGVRGCIES 208 (216)
Q Consensus 143 ~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~----d~~k~~~lg~~~-~~~~~~i~~~~~~ 208 (216)
.|+++++.++++|++++|.+.+|...++............+ +.++++.|||.+ ++++++|+++++.
T Consensus 269 ~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 269 RVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp EEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred EEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence 55666889999999999999998777765544222222222 233447799998 9999999999763
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2.4e-27 Score=183.82 Aligned_cols=205 Identities=16% Similarity=0.126 Sum_probs=148.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--cCC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--NGI 79 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~ 79 (216)
||.+|+++|++. ++++||++||+ .+||.........+++|+.+..|. ++|+.||.++|++++++.+. .++
T Consensus 104 ~t~~ll~~~~~~-~i~~~i~~SS~-~vyg~~~~~~~~~~~~e~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~ 175 (347)
T d1z45a2 104 GTVVLLELMQQY-NVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGPT------NPYGHTKYAIENILNDLYNSDKKSW 175 (347)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred hhHHHHHHHHhc-ccceEEeecce-eeecCcccCCCCCccccccCCCCC------ChhHhHHHHHHHHHHHHHHhhccCC
Confidence 789999999998 99999999997 999876533345677887766655 66999999999999999764 478
Q ss_pred cEEEEcCCCccCCCCCCC--------CCccHHHHHHHHcCC--C--CCC---------CCCceeehhhhHHHHHHhhcC-
Q 027969 80 DLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD--Q--SFA---------FPYIFVEIRDVVYAHIRALEV- 137 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~--~--~~~---------~~~~~i~v~D~a~~~~~~~~~- 137 (216)
+++++|+++|||+..... .+.+..++.....+. + .++ ...|++|+.|++.+++.+++.
T Consensus 176 ~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 255 (347)
T d1z45a2 176 KFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYL 255 (347)
T ss_dssp EEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred cEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeeccccccccccccc
Confidence 999999999999754221 112333444444333 2 222 123588888888888887753
Q ss_pred -----CC-CCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccchHHH-HHhCCee-eehhhhHHHHH
Q 027969 138 -----PK-ASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 138 -----~~-~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~ 206 (216)
.. ..+.||++ +.++|+.|+++.+.+.++........ .........+|++|+ ++|||+| ++++|+|++++
T Consensus 256 ~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti 335 (347)
T d1z45a2 256 EAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLW 335 (347)
T ss_dssp HHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHH
T ss_pred ccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 11 23368776 78899999999999988543211111 123345567899999 7799999 99999999999
Q ss_pred HHHHHcCC
Q 027969 207 ESLMEKGF 214 (216)
Q Consensus 207 ~~~~~~~~ 214 (216)
+|++++.+
T Consensus 336 ~w~~~np~ 343 (347)
T d1z45a2 336 KWTTENPF 343 (347)
T ss_dssp HHHHHCTT
T ss_pred HHHHhChh
Confidence 99998753
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=4.9e-27 Score=181.42 Aligned_cols=199 Identities=13% Similarity=0.128 Sum_probs=144.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 80 (216)
||++||++|++. ++++||++||. ++|+... ..+..|+++.. .+.++|+.+|..+|+++..+.+. .+++
T Consensus 103 gt~nlL~~~~~~-~v~~~i~~Ss~-~vy~~~~----~~~~~e~~~~~-----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 171 (338)
T d1udca_ 103 GTLRLISAMRAA-NVKNFIFSSSA-TVYGDQP----KIPYVESFPTG-----TPQSPYGKSKLMVEQILTDLQKAQPDWS 171 (338)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEG-GGGCSCC----SSSBCTTSCCC-----CCSSHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHHHHHHh-CCCEEEecCcc-eEEcccc----ccccccccccC-----CCcchHHHHHhhhhHHHHHHHhhccCCe
Confidence 799999999999 89999999997 9997765 44555554322 12356999999999999977665 4899
Q ss_pred EEEEcCCCccCCCCCCCC--------Ccc-HHHHHHHHcCCCCC-----------C-CCCceeehhhhHHHHHHhhcCCC
Q 027969 81 LVAIHPGTVIGPFFQPIL--------NFG-AEVILNLINGDQSF-----------A-FPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~--------~~~-~~~~~~~~~~~~~~-----------~-~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
++++|+++|||+...... +.+ +.++..+..+...+ + ..++|+|++|++.++..++....
T Consensus 172 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~ 251 (338)
T d1udca_ 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLA 251 (338)
T ss_dssp EEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHT
T ss_pred EEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccc
Confidence 999999999998654221 122 23333343332111 1 33579999999999888775322
Q ss_pred C---CceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 140 A---SGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 140 ~---~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
. +++||++ +..+|+.|+++.+.+.++.. ++... .........+|++|+ +.|||+| ++++|+|+++++|++
T Consensus 252 ~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~ 330 (338)
T d1udca_ 252 NKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQS 330 (338)
T ss_dssp TCCEEEEEEESCSSCEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred cccCcceeeecCCCCCcHHHHHHHHHHHHCCC-CceEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 2 2368776 67899999999999998532 11111 122334567899999 6799999 999999999999999
Q ss_pred Hc
Q 027969 211 EK 212 (216)
Q Consensus 211 ~~ 212 (216)
++
T Consensus 331 ~~ 332 (338)
T d1udca_ 331 RH 332 (338)
T ss_dssp HC
T ss_pred hc
Confidence 87
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=2.5e-27 Score=183.00 Aligned_cols=199 Identities=13% Similarity=-0.001 Sum_probs=149.2
Q ss_pred cHHHHHHHHhcc----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc
Q 027969 2 GTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 77 (216)
Q Consensus 2 gt~~ll~~~~~~----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 77 (216)
|+.+++++++.. ....++++.||+ .+|+.. ..+++|+++..|. +.|+.+|+.+|+++..+.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~ss~-~~~~~~-----~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~ 176 (339)
T d1n7ha_ 109 GALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGST-----PPPQSETTPFHPR------SPYAASKCAAHWYTVNYREAY 176 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTS-----CSSBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhcccccccceeeeecccc-eecccC-----CCCCCCCCCCCCc------chhhHHHHHHHHHHHHHHHHh
Confidence 678888888653 133467888885 787665 4678998887765 669999999999999999999
Q ss_pred CCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCC-CC--CC---CCCceeehhhhHHHHHHhhcCCCCCceEEEecC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 149 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 149 (216)
+++++++||++||||....... .+...+.....+. +. .+ ..++|+|++|+|+++..+++++...+.+++.+.
T Consensus 177 ~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~ 256 (339)
T d1n7ha_ 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEE 256 (339)
T ss_dssp CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSCCEEEECCSC
T ss_pred CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCCCcccccccc
Confidence 9999999999999998654321 1223333344444 22 22 456799999999999999998876666777788
Q ss_pred CCCHHHHHHHHHHhCCCCCCC-----CC-CccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHHc
Q 027969 150 VAQHSDILKFLREHYPTLLRS-----GK-LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 212 (216)
Q Consensus 150 ~~s~~el~~~i~~~~~~~~~~-----~~-~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~~ 212 (216)
..+..++++.+.+.++..... .. ..+........|++|+ +.|||+| .+++++|+++++|+.+.
T Consensus 257 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 257 GHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 327 (339)
T ss_dssp EEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 899999999999998643211 11 1123334567799999 7799999 99999999999998653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=2e-27 Score=187.19 Aligned_cols=210 Identities=14% Similarity=0.080 Sum_probs=148.8
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCC--CccccCCCCCC-cccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTP--DVVIDETWFSN-PVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~--~~~~~E~~~~~-~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.+|+++|++.+..++|++.||+ .+|+....... ....+|+.... ...+..|.++|+.||+++|.+++.+.++++
T Consensus 123 gt~nll~~~~~~~~~~~~i~~ss~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~ 201 (393)
T d1i24a_ 123 GTLNVLFAIKEFGEECHLVKLGTM-GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG 201 (393)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCG-GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHhccccceeecccc-ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc
Confidence 799999999998344567777776 88876531111 11122221111 011223456799999999999999999999
Q ss_pred CcEEEEcCCCccCCCCCCCC----------------CccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcC
Q 027969 79 IDLVAIHPGTVIGPFFQPIL----------------NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~----------------~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~ 137 (216)
++++++||++|||++..... ..+..++.+...|+ ..++ ..++|+|++|+|+++..++++
T Consensus 202 l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~ 281 (393)
T d1i24a_ 202 IRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIAN 281 (393)
T ss_dssp CEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred eeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHh
Confidence 99999999999999864321 12356777777777 3334 456899999999999999998
Q ss_pred CCCCce-E--EEecCCCCHHHHHHHHHHhCCCCC--CCC-----CCccCCCCccccchHHHHHhCCee-eehhhhHHHHH
Q 027969 138 PKASGR-Y--LLAGSVAQHSDILKFLREHYPTLL--RSG-----KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCI 206 (216)
Q Consensus 138 ~~~~~~-~--~~~~~~~s~~el~~~i~~~~~~~~--~~~-----~~~~~~~~~~~~d~~k~~~lg~~~-~~~~~~i~~~~ 206 (216)
....+. + +++++.+|+.|+++.+.+..+... ++. ............|++|+++|||+| +++++++++++
T Consensus 282 ~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~ 361 (393)
T d1i24a_ 282 PAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLL 361 (393)
T ss_dssp CCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHH
T ss_pred hcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHH
Confidence 777663 2 344677899999999988753221 111 111233345578899997799999 99999999999
Q ss_pred HHHHHc
Q 027969 207 ESLMEK 212 (216)
Q Consensus 207 ~~~~~~ 212 (216)
+|+++.
T Consensus 362 ~~~~~~ 367 (393)
T d1i24a_ 362 NFAVQF 367 (393)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998775
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.1e-26 Score=176.67 Aligned_cols=200 Identities=16% Similarity=0.100 Sum_probs=143.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCc
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGID 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~ 80 (216)
||.+|+++|++. ++++|||+||+ .+|+... .....++.... .+.++|+.+|..+|+.+.++.+. .+++
T Consensus 111 gt~~l~~~~~~~-~v~~~i~~ss~-~~~~~~~----~~~~~~~~~~~-----~~~~~Y~~~k~~~e~~~~~~~~~~~~~~ 179 (346)
T d1ek6a_ 111 GTIQLLEIMKAH-GVKNLVFSSSA-TVYGNPQ----YLPLDEAHPTG-----GCTNPYGKSKFFIEEMIRDLCQADKTWN 179 (346)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGGCSCS----SSSBCTTSCCC-----CCSSHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ccccccchhhhc-Ccccccccccc-eeeeccc----ccccccccccc-----ccCChHHHHHHHHHHHHHHHHHhccCCc
Confidence 789999999999 99999999997 8888764 22222221111 12356999999999999998776 4899
Q ss_pred EEEEcCCCccCCCCCCCC--------CccHHHHHHHHcCC--C--------CCC---CCCceeehhhhHHHHHHhhcCC-
Q 027969 81 LVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGD--Q--------SFA---FPYIFVEIRDVVYAHIRALEVP- 138 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~--~--------~~~---~~~~~i~v~D~a~~~~~~~~~~- 138 (216)
.+++|++++||+...... +.+...+.....+. + ... +.++|+|++|+|.++..++...
T Consensus 180 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~ 259 (346)
T d1ek6a_ 180 AVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK 259 (346)
T ss_dssp EEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHT
T ss_pred eEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccc
Confidence 999999999998653211 12223333322222 1 111 3457999999999998886542
Q ss_pred --CCCceEEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHH
Q 027969 139 --KASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 210 (216)
Q Consensus 139 --~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~ 210 (216)
..+++||++ +..+++.|+++.|++.++.. .+... .+.+.....+|++|+ +.|||+| ++++|+|+++++|++
T Consensus 260 ~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~-~~~~~~~~~~~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~ 338 (346)
T d1ek6a_ 260 EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK-IPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQK 338 (346)
T ss_dssp TTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred cccCceEEEeCCCCcccHHHHHHHHHHHhCCC-CCeEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 223378766 78899999999999998642 12111 123345567899999 7799999 999999999999999
Q ss_pred HcC
Q 027969 211 EKG 213 (216)
Q Consensus 211 ~~~ 213 (216)
++.
T Consensus 339 ~n~ 341 (346)
T d1ek6a_ 339 QNP 341 (346)
T ss_dssp HCT
T ss_pred hCH
Confidence 874
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.94 E-value=4.5e-26 Score=178.77 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=144.9
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCC---CCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM---TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 78 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~---~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 78 (216)
||.++++++++. ++++++++||. .+|+..... ....++.|+++..| .++|+.+|+.+|++++.+.+.++
T Consensus 123 ~t~~~l~~~~~~-~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~e~~~~~p------~~~Y~~sK~~~e~~~~~~~~~~g 194 (383)
T d1gy8a_ 123 GILRLLQAMLLH-KCDKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSP------ESPYGESKLIAERMIRDCAEAYG 194 (383)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBC------SSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccchhhhcc-CCccccccccc-ccccccccccccccccccccccCCCC------CCHHHhhHhHHHHHHHHHHHHhC
Confidence 789999999999 88999999997 888765421 11234455544444 46799999999999999999899
Q ss_pred CcEEEEcCCCccCCCCCCCCC--------ccHHHHHHHHc----CC-C-------------------CCC---CCCceee
Q 027969 79 IDLVAIHPGTVIGPFFQPILN--------FGAEVILNLIN----GD-Q-------------------SFA---FPYIFVE 123 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~----~~-~-------------------~~~---~~~~~i~ 123 (216)
++++++|++++||+....... ..+.++.++.. +. . ..+ +.++|+|
T Consensus 195 l~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~ 274 (383)
T d1gy8a_ 195 IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVH 274 (383)
T ss_dssp CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEE
T ss_pred CCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEE
Confidence 999999999999998764321 12333333331 11 0 001 2247999
Q ss_pred hhhhHHHHHHhhcC---------CCCCceEEEe-cCCCCHHHHHHHHHHhCCCCC-CCCC-CccCCCCccccchHHH-HH
Q 027969 124 IRDVVYAHIRALEV---------PKASGRYLLA-GSVAQHSDILKFLREHYPTLL-RSGK-LEEKYQPTIKVSQERA-KS 190 (216)
Q Consensus 124 v~D~a~~~~~~~~~---------~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~~-~~~~~~~~~~~d~~k~-~~ 190 (216)
++|+|+++..+++. ....++||++ +..+++.|+++.+.+.++... +... ....+......|++|+ +.
T Consensus 275 v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~ 354 (383)
T d1gy8a_ 275 VCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREV 354 (383)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHH
Confidence 99999999998863 1122368775 788999999999999875331 1111 0122344567899999 77
Q ss_pred hCCee-eehhhhHHHH-HHHHHHc
Q 027969 191 LGINF-TPWEVGVRGC-IESLMEK 212 (216)
Q Consensus 191 lg~~~-~~~~~~i~~~-~~~~~~~ 212 (216)
|||+| .+++|+|.++ +.|++.+
T Consensus 355 LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 355 LGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp TCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HCCccCCCHHHHHHHHHHHHHHhC
Confidence 99999 9999999887 5777765
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=7.4e-25 Score=166.40 Aligned_cols=194 Identities=20% Similarity=0.176 Sum_probs=132.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+++++++.. +++ +|+.||. .+|.... .....|+.+..+. +.|+.+|..+|.++..+.+..++++
T Consensus 96 ~~~~~l~~~~~~-~i~-~v~~ss~-~~~~~~~----~~~~~~~~~~~~~------~~Y~~~K~~~e~~~~~~~~~~~~~~ 162 (307)
T d1eq2a_ 96 YSKELLHYCLER-EIP-FLYASSA-ATYGGRT----SDFIESREYEKPL------NVYGYSKFLFDEYVRQILPEANSQI 162 (307)
T ss_dssp HHHHHHHHHHHH-TCC-EEEEEEG-GGGTTCC----SCBCSSGGGCCCS------SHHHHHHHHHHHHHHHHGGGCSSCE
T ss_pred cccccccccccc-ccc-ccccccc-ccccccc----ccccccccccccc------cccccccchhhhhcccccccccccc
Confidence 678999999988 775 6777775 5554433 3444444433333 5699999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCC---CccHHHHHHHHcCC-CCC--C---CCCceeehhhhHHHHHHhhcCCCCCceEEE-ecCCC
Q 027969 82 VAIHPGTVIGPFFQPIL---NFGAEVILNLINGD-QSF--A---FPYIFVEIRDVVYAHIRALEVPKASGRYLL-AGSVA 151 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~--~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~ 151 (216)
+++||++||||...... .....++..+..++ ..+ + ..++|+|++|++.++..++..+. .+.|++ ++...
T Consensus 163 ~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (307)
T d1eq2a_ 163 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAE 241 (307)
T ss_dssp EEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCB
T ss_pred ccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-ccccccccccch
Confidence 99999999999864321 12345566677776 322 2 45689999999999999998654 456655 58899
Q ss_pred CHHHHHHHHHHhCCCCCCC-----CCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHH
Q 027969 152 QHSDILKFLREHYPTLLRS-----GKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 209 (216)
Q Consensus 152 s~~el~~~i~~~~~~~~~~-----~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~ 209 (216)
+++|+++++.+..+...+. .............|++|+ +.+||+| ++++|+|+++++|+
T Consensus 242 si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 242 SFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp CHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 9999999998876533222 111112223345699999 7789999 99999999999995
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.90 E-value=1.8e-23 Score=162.10 Aligned_cols=200 Identities=14% Similarity=0.070 Sum_probs=142.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHH------
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK------ 75 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------ 75 (216)
||.+++++|.+.+..+.+++.||. .+|..... ..+.+|+++..|. ++|+.+|..+|..+..+..
T Consensus 109 g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~---~~~~~~~~~~~p~------~~y~~~k~~~e~~~~~~~~~~~~~~ 178 (356)
T d1rkxa_ 109 GTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW---IWGYRENEAMGGY------DPYSNSKGCAELVTSSYRNSFFNPA 178 (356)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS---SSCBCTTSCBCCS------SHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred cchhhhhhhhcccccccccccccc-cccccccc---ccccccccccCCC------CccccccccchhhhhHHhhhcccch
Confidence 789999999997455566666664 55544331 4566666655554 5699999999999988765
Q ss_pred ---HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCC-CCC---CCCceeehhhhHHHHHHhhcCCCCCc-----e
Q 027969 76 ---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ-SFA---FPYIFVEIRDVVYAHIRALEVPKASG-----R 143 (216)
Q Consensus 76 ---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-----~ 143 (216)
..++.++++||+++||+++......+..++.....+.+ .+. ..++++|++|+|+++..++......+ .
T Consensus 179 ~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~ 258 (356)
T d1rkxa_ 179 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEG 258 (356)
T ss_dssp GHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSE
T ss_pred hccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhhhcccccccccc
Confidence 34688999999999999876544344556666655552 223 56689999999999999987543222 1
Q ss_pred E--EE-ecCCCCHHHHHHHHHHhCCCCC-C--CCCCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHHHH
Q 027969 144 Y--LL-AGSVAQHSDILKFLREHYPTLL-R--SGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 211 (216)
Q Consensus 144 ~--~~-~~~~~s~~el~~~i~~~~~~~~-~--~~~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~~~ 211 (216)
. .. .+..+++.++++.+.+.++... + .....+.......+|++|+ ++|||+| ++++++|+++++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 259 WNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp EECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 2 22 2557899999999999985432 1 1111133345567899999 7899999 9999999999999886
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.89 E-value=1.1e-22 Score=152.66 Aligned_cols=186 Identities=12% Similarity=0.020 Sum_probs=141.5
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEE
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 82 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 82 (216)
+.++++.+... . .+++++||. .+|+... ..+++|+++..+. ..|+.+|..+|+.+.++ +.+++
T Consensus 83 ~~~~~~~~~~~-~-~~~~~~ss~-~v~~~~~----~~~~~e~~~~~~~------~~~~~~k~~~e~~~~~~----~~~~~ 145 (281)
T d1vl0a_ 83 PKNLAAAAYSV-G-AEIVQISTD-YVFDGEA----KEPITEFDEVNPQ------SAYGKTKLEGENFVKAL----NPKYY 145 (281)
T ss_dssp HHHHHHHHHHH-T-CEEEEEEEG-GGSCSCC----SSCBCTTSCCCCC------SHHHHHHHHHHHHHHHH----CSSEE
T ss_pred ccccccccccc-c-ccccccccc-eeeeccc----cccccccccccch------hhhhhhhhHHHHHHHHh----CCCcc
Confidence 45566666665 4 478888886 8888766 6788888877665 45999999999988554 78999
Q ss_pred EEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCceeehhhhHHHHHHhhcCCCCCceE-EEecCCCCHHHHHH
Q 027969 83 AIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRY-LLAGSVAQHSDILK 158 (216)
Q Consensus 83 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~~~~s~~el~~ 158 (216)
++||++|||++.. ....++..+.++. ..++ ..++|+|++|+++++..++++.. .|.| +++++.+|+.|+++
T Consensus 146 i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~s~~e~~~ 220 (281)
T d1vl0a_ 146 IVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCKGICSWYDFAV 220 (281)
T ss_dssp EEEECSEESSSSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCBSCEEHHHHHH
T ss_pred ccceeEEeCCCcc----cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cCceeEeCCCccchHHHHH
Confidence 9999999999753 4556677777776 3444 77789999999999999998765 4566 45588999999999
Q ss_pred HHHHhCCCCC----CCCCCc-cC--CCCccccchHHH-HHhCCeeeehhhhHHHHHHHHH
Q 027969 159 FLREHYPTLL----RSGKLE-EK--YQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 210 (216)
Q Consensus 159 ~i~~~~~~~~----~~~~~~-~~--~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~ 210 (216)
.+++.++... ++.... .. ......+|++|+ +.|||+|++|+++|++++++++
T Consensus 221 ~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 221 EIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp HHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred HHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence 9999986431 221111 11 112335799999 7799999999999999999985
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.88 E-value=1.2e-22 Score=156.14 Aligned_cols=206 Identities=12% Similarity=0.085 Sum_probs=142.0
Q ss_pred CcHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCC----------CcccccccchhHHHHHHHHHHHH
Q 027969 1 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS----------NPVLCKENKEWYSLAKTLAEEAA 70 (216)
Q Consensus 1 ~gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~----------~~~~~~~~~~~Y~~sK~~~E~~~ 70 (216)
.||.|||++|.+. +++++|+.||++.+|+... ..+..+.... .......+.+.|+.+|...|.++
T Consensus 101 ~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~ 175 (338)
T d1orra_ 101 GGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLE----QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYM 175 (338)
T ss_dssp HHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCT----TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc-ccccccccccccccccccc----ccccccccccccccccccCcccCCccccccccccccchhhhhh
Confidence 3899999999998 6677777777657776543 2221111100 00111234467999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHc-----CC--CCCC---CCCceeehhhhHHHHHHhhcCC
Q 027969 71 WKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLIN-----GD--QSFA---FPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 71 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~-----~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
..+.+.++...+++|++++||+....... ....++..+.. ++ ..++ ..++|+|++|++++++.+++..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~ 255 (338)
T d1orra_ 176 LDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV 255 (338)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH
T ss_pred hhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc
Confidence 99999999999999999999877644321 22344444332 22 1222 3458999999999999999764
Q ss_pred C-C-CceEEEe---cCCCCHHHHHHHHHHhCCCCC-CCC-CCccCCCCccccchHHH-HHhCCee-eehhhhHHHHHHHH
Q 027969 139 K-A-SGRYLLA---GSVAQHSDILKFLREHYPTLL-RSG-KLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 209 (216)
Q Consensus 139 ~-~-~~~~~~~---~~~~s~~el~~~i~~~~~~~~-~~~-~~~~~~~~~~~~d~~k~-~~lg~~~-~~~~~~i~~~~~~~ 209 (216)
. . +..|++. +..+++.|+++.+.+..+... +.. ...........+|++|+ +.|||+| .+++|+|+++++|+
T Consensus 256 ~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~ 335 (338)
T d1orra_ 256 SKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWT 335 (338)
T ss_dssp HHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred ccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 3 2 3366653 456899999999999875432 111 11123344567799999 7899999 99999999999999
Q ss_pred HH
Q 027969 210 ME 211 (216)
Q Consensus 210 ~~ 211 (216)
+.
T Consensus 336 k~ 337 (338)
T d1orra_ 336 SS 337 (338)
T ss_dssp HH
T ss_pred Hc
Confidence 86
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.80 E-value=4.7e-19 Score=133.52 Aligned_cols=192 Identities=13% Similarity=0.127 Sum_probs=133.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+|+++|.+. ++ ++++.||+ .+|+... ..+++|++++.|. +.|+.+|..+|..+..+ ....
T Consensus 84 ~~~~l~~~~~~~-~~-~~~~~ss~-~~~~~~~----~~~~~E~~~~~p~------~~y~~~k~~~e~~~~~~----~~~~ 146 (298)
T d1n2sa_ 84 SVEAIAKAANET-GA-WVVHYSTD-YVFPGTG----DIPWQETDATSPL------NVYGKTKLAGEKALQDN----CPKH 146 (298)
T ss_dssp HHHHHHHHHTTT-TC-EEEEEEEG-GGSCCCT----TCCBCTTSCCCCS------SHHHHHHHHHHHHHHHH----CSSE
T ss_pred ccccchhhhhcc-cc-cccccccc-ccccCCC----CCCCccccccCCC------chHhhhhhhhhhhHHhh----hccc
Confidence 578999999987 64 68888996 7776655 6789999877765 56999999999998765 3456
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCC-CCCceeehhhhHHHHHHhhc----CCCCCceEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA-FPYIFVEIRDVVYAHIRALE----VPKASGRYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~i~v~D~a~~~~~~~~----~~~~~~~~~~~-~~~~s~ 153 (216)
.++|++..++..... ....+...+..+. . ..+ ...+++|++|+++++..++. .+...+.|+++ ++.++.
T Consensus 147 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~ 223 (298)
T d1n2sa_ 147 LIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTW 223 (298)
T ss_dssp EEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEH
T ss_pred ccccccceeeccCCc---cchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCceec
Confidence 667766666543221 2223334444444 2 223 55679999999999888774 34445688766 678999
Q ss_pred HHHHHHHHHhCCCC----CCC------CCCc-cC--CCCccccchHHH-HHhCCeeeehhhhHHHHHHHHHHcC
Q 027969 154 SDILKFLREHYPTL----LRS------GKLE-EK--YQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLMEKG 213 (216)
Q Consensus 154 ~el~~~i~~~~~~~----~~~------~~~~-~~--~~~~~~~d~~k~-~~lg~~~~~~~~~i~~~~~~~~~~~ 213 (216)
.++++.+.+..+.. .++ .... .. ......+|++|+ +.|||+|++|+++|+++++++....
T Consensus 224 ~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~~~~~~ 297 (298)
T d1n2sa_ 224 HDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTT 297 (298)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHHHHHHHHHHHHhhc
Confidence 99999888765211 111 0000 00 012336899999 7799999999999999999987653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=4.5e-14 Score=102.45 Aligned_cols=115 Identities=16% Similarity=0.054 Sum_probs=83.4
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC-c
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI-D 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~ 80 (216)
++.+++++|.+. ++++|||+||. .+++... ++|+.+|..+|+.+.++ ++ +
T Consensus 107 ~~~~~~~~a~~~-~v~~fi~~Ss~-~~~~~~~-----------------------~~Y~~~K~~~E~~l~~~----~~~~ 157 (232)
T d2bkaa1 107 YVLKSAELAKAG-GCKHFNLLSSK-GADKSSN-----------------------FLYLQVKGEVEAKVEEL----KFDR 157 (232)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCT-TCCTTCS-----------------------SHHHHHHHHHHHHHHTT----CCSE
T ss_pred ccceeeeccccc-CccccccCCcc-ccccCcc-----------------------chhHHHHHHhhhccccc----cccc
Confidence 578999999998 89999999997 6653321 44999999999988554 66 4
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCceEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 148 (216)
++|+||+.+||+..... ....++....... ..+ .....||++|+|++++.++..+..++.+++++
T Consensus 158 ~~IlRP~~i~G~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 158 YSVFRPGVLLCDRQESR--PGEWLVRKFFGSL-PDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp EEEEECCEEECTTGGGS--HHHHHHHHHHCSC-CTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred eEEecCceeecCCCcCc--HHHHHHHHHhhcc-CCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence 89999999999876531 2222233333321 112 33457999999999999998887777776653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.46 E-value=3.7e-14 Score=101.51 Aligned_cols=108 Identities=18% Similarity=0.169 Sum_probs=76.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC-c
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI-D 80 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~ 80 (216)
++.+++++|++. ++++||++||. .+++... +.|+.+|..+|+.+.+ .++ +
T Consensus 90 ~~~~~~~~a~~~-~v~~~i~~Ss~-~~~~~~~-----------------------~~y~~~K~~~E~~l~~----~~~~~ 140 (212)
T d2a35a1 90 LPLAVGKRALEM-GARHYLVVSAL-GADAKSS-----------------------IFYNRVKGELEQALQE----QGWPQ 140 (212)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCT-TCCTTCS-----------------------SHHHHHHHHHHHHHTT----SCCSE
T ss_pred hhhhcccccccc-ccccccccccc-ccccccc-----------------------cchhHHHHHHhhhccc----ccccc
Confidence 578999999998 99999999997 6664321 3499999999998753 355 5
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-C-CCCCCCceeehhhhHHHHHHhhcCCCCCceEE
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 145 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 145 (216)
++|+||+.|||+..... .. ...... . .+++.+..||++|+|++++.++.++..+..|+
T Consensus 141 ~~I~Rp~~v~G~~~~~~---~~----~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~~ 200 (212)
T d2a35a1 141 LTIARPSLLFGPREEFR---LA----EILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFV 200 (212)
T ss_dssp EEEEECCSEESTTSCEE---GG----GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred ceeeCCcceeCCccccc---HH----HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCCEEE
Confidence 99999999999876421 11 111111 1 11144567999999999999998765443443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.43 E-value=1.4e-14 Score=108.65 Aligned_cols=139 Identities=15% Similarity=0.231 Sum_probs=94.0
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.++++++..+ +++++++.||. ..+.. +....... ..+...+...+..+ +..++++
T Consensus 91 ~~~~~~~a~~~~-~~~~~~~~s~~-~~~~~-----------~~~~~~~~------~~~~~~~~~~~~~~----~~~~~~~ 147 (307)
T d1qyca_ 91 SQVNIIKAIKEV-GTVKRFFPSEF-GNDVD-----------NVHAVEPA------KSVFEVKAKVRRAI----EAEGIPY 147 (307)
T ss_dssp GGHHHHHHHHHH-CCCSEEECSCC-SSCTT-----------SCCCCTTH------HHHHHHHHHHHHHH----HHHTCCB
T ss_pred hhhHHHHHHHHh-ccccceeeecc-ccccc-----------cccccccc------cccccccccccchh----hccCCCc
Confidence 568899999988 77888988885 33321 11111111 23666666666555 4448999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc--eEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG--RYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~-~~~~s~ 153 (216)
+++||+++||+..... ..++....++. ..++ ..++|+|++|+|+++..+++++...+ .|+++ ++.+|+
T Consensus 148 ~i~r~~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~ 223 (307)
T d1qyca_ 148 TYVSSNCFAGYFLRSL----AQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSL 223 (307)
T ss_dssp EEEECCEEHHHHTTTT----TCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEH
T ss_pred eecccceecCCCccch----hhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCH
Confidence 9999999999875431 11222233333 2222 56689999999999999998875544 46655 688999
Q ss_pred HHHHHHHHHhCCCC
Q 027969 154 SDILKFLREHYPTL 167 (216)
Q Consensus 154 ~el~~~i~~~~~~~ 167 (216)
.|+++.+.+.+|..
T Consensus 224 ~ei~~~~~~~~G~~ 237 (307)
T d1qyca_ 224 NELVALWEKKIDKT 237 (307)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999998653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.39 E-value=4e-14 Score=106.69 Aligned_cols=140 Identities=12% Similarity=0.140 Sum_probs=91.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++.+++++|.+. +..++|+.||. ++++... ..+..+. ..|..+|..+++ +.+..++++
T Consensus 94 ~~~~~l~~a~~~-~~~~~v~~Ss~-g~~~~~~----------~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~ 151 (312)
T d1qyda_ 94 EQLKLVEAIKEA-GNIKRFLPSEF-GMDPDIM----------EHALQPG------SITFIDKRKVRR----AIEAASIPY 151 (312)
T ss_dssp THHHHHHHHHHS-CCCSEEECSCC-SSCTTSC----------CCCCSST------THHHHHHHHHHH----HHHHTTCCB
T ss_pred hhhHHHHHHHHh-cCCcEEEEeec-cccCCCc----------ccccchh------hhhhHHHHHHHH----hhcccccce
Confidence 578899999988 55678888885 5543221 1111111 235555555554 445668999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC---CCCceeehhhhHHHHHHhhcCCCCCc--eEEEe-cCCCCH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG--RYLLA-GSVAQH 153 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~-~~~~s~ 153 (216)
+++|++.+||+......... ......+. ..++ ..++|+|++|+|++++.++.++...+ .|+++ ++.+|+
T Consensus 152 ~i~r~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~ 228 (312)
T d1qyda_ 152 TYVSSNMFAGYFAGSLAQLD---GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQ 228 (312)
T ss_dssp CEEECCEEHHHHTTTSSCTT---CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEH
T ss_pred EEeccceeecCCccchhhHH---HHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCH
Confidence 99999999997653321111 11112233 3333 45679999999999999998876554 45555 567999
Q ss_pred HHHHHHHHHhCCC
Q 027969 154 SDILKFLREHYPT 166 (216)
Q Consensus 154 ~el~~~i~~~~~~ 166 (216)
+|+++.+++.++.
T Consensus 229 ~e~~~~~~~~~g~ 241 (312)
T d1qyda_ 229 KEVIQIWERLSEQ 241 (312)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCC
Confidence 9999999998753
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.7e-11 Score=86.90 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=79.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
++++++++++++ +++|||++||. .++.+.. ..+ . ....|...|..+|+.++ ..++++
T Consensus 90 ~~~~l~~aa~~~-~v~r~i~~ss~-~~~~~~~----~~~-------~------~~~~~~~~~~~~e~~l~----~~~~~~ 146 (205)
T d1hdoa_ 90 GARNIVAAMKAH-GVDKVVACTSA-FLLWDPT----KVP-------P------RLQAVTDDHIRMHKVLR----ESGLKY 146 (205)
T ss_dssp HHHHHHHHHHHH-TCCEEEEECCG-GGTSCTT----CSC-------G------GGHHHHHHHHHHHHHHH----HTCSEE
T ss_pred HHHHHHHHHHhc-CCCeEEEEeee-eccCCCc----ccc-------c------cccccchHHHHHHHHHH----hcCCce
Confidence 688999999999 99999999997 6665432 110 1 11248899999998774 459999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEec
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 148 (216)
+++||+.+++......... ..-+ ....+++.+|+|++++.+++++.-.| .+..+.
T Consensus 147 tiirp~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 147 VAVMPPHIGDQPLTGAYTV------------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp EEECCSEEECCCCCSCCEE------------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred EEEecceecCCCCcccEEE------------eeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 9999999987543211100 1112 45679999999999999998876545 455543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.12 E-value=3e-11 Score=87.29 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=85.6
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|++++++.+... ..+++.+.|+. ..+.... +... .....|...+...+. +....++++
T Consensus 111 ~~~~~~~~~~~~-~~~~~~~~s~~-~~~~~~~------~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~~ 168 (252)
T d2q46a1 111 GQKNQIDAAKVA-GVKHIVVVGSM-GGTNPDH------PLNK----------LGNGNILVWKRKAEQ----YLADSGTPY 168 (252)
T ss_dssp HHHHHHHHHHHH-TCSEEEEEEET-TTTCTTC------GGGG----------GGGCCHHHHHHHHHH----HHHHSSSCE
T ss_pred cceeeccccccc-ccccccccccc-ccCCCCc------cccc----------ccccchhhhhhhhhh----hhhcccccc
Confidence 678889888887 77888888886 4442211 1000 011125555554443 445569999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCC-CCCceeehhhhHHHHHHhhcCCCCCc-eEEEec-C---CCCHH
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG-S---VAQHS 154 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~---~~s~~ 154 (216)
+++||+++||+...... ...+. .... ...+++|++|+|++++.+++++...+ .|++++ . ..+++
T Consensus 169 ~ilRp~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~ 239 (252)
T d2q46a1 169 TIIRAGGLLDKEGGVRE---------LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 239 (252)
T ss_dssp EEEEECEEECSCTTSSC---------EEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCC
T ss_pred eeecceEEECCCcchhh---------hhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHH
Confidence 99999999998754211 11222 2222 56789999999999999999877666 786553 2 35788
Q ss_pred HHHHHHHHhC
Q 027969 155 DILKFLREHY 164 (216)
Q Consensus 155 el~~~i~~~~ 164 (216)
|+.+++.+..
T Consensus 240 ~~~~lf~~i~ 249 (252)
T d2q46a1 240 DFKALFSQVT 249 (252)
T ss_dssp CHHHHHTTCC
T ss_pred HHHHHHHHHH
Confidence 8887776543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.98 E-value=2.8e-10 Score=86.91 Aligned_cols=138 Identities=11% Similarity=-0.010 Sum_probs=90.2
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
.+.+++++|.+. +++++|+.||. ....... ... . ..|..+|...|..+. ..++++
T Consensus 89 ~~~~~~~aa~~a-gv~~~v~~Ss~-~~~~~~~------~~~-----~--------~~~~~~k~~~~~~~~----~~~~~~ 143 (350)
T d1xgka_ 89 IGKDLADAAKRA-GTIQHYIYSSM-PDHSLYG------PWP-----A--------VPMWAPKFTVENYVR----QLGLPS 143 (350)
T ss_dssp HHHHHHHHHHHH-SCCSEEEEEEC-CCGGGTS------SCC-----C--------CTTTHHHHHHHHHHH----TSSSCE
T ss_pred hhhHHHHHHHHh-CCCceEEEeec-cccccCC------ccc-----c--------hhhhhhHHHHHHHHH----hhccCc
Confidence 468999999998 87888888886 3332211 000 1 227788888777654 447999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCC-----CCCC-CCCceeeh-hhhHHHHHHhhcCCC--CCc-eEEEecCCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGD-----QSFA-FPYIFVEI-RDVVYAHIRALEVPK--ASG-RYLLAGSVA 151 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~i~v-~D~a~~~~~~~~~~~--~~~-~~~~~~~~~ 151 (216)
+++|++..++........... ......+. +..+ ....++++ +|+++++..++..+. ..| .|+++++.+
T Consensus 144 ~~vr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~ 221 (350)
T d1xgka_ 144 TFVYAGIYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL 221 (350)
T ss_dssp EEEEECEEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEE
T ss_pred eeeeeceeecccccccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcC
Confidence 999999998865432211110 00111222 1112 45567775 799999999986532 234 678888889
Q ss_pred CHHHHHHHHHHhCCC
Q 027969 152 QHSDILKFLREHYPT 166 (216)
Q Consensus 152 s~~el~~~i~~~~~~ 166 (216)
|+.|+++.+.+.+|.
T Consensus 222 T~~eia~~l~~~~G~ 236 (350)
T d1xgka_ 222 SPVQVCAAFSRALNR 236 (350)
T ss_dssp CHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHCC
Confidence 999999999998864
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.69 E-value=7.8e-05 Score=53.63 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=70.5
Q ss_pred cHHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 027969 2 GTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 81 (216)
Q Consensus 2 gt~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 81 (216)
|+.++.+++... +..+||++||+++.+|... . ..|+.+|...+.+.++... .|+++
T Consensus 123 g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~~--------------~--------~~YaAaka~l~~la~~~~~-~Gi~v 178 (259)
T d2fr1a1 123 GARNLHELTREL-DLTAFVLFSSFASAFGAPG--------------L--------GGYAPGNAYLDGLAQQRRS-DGLPA 178 (259)
T ss_dssp HHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT--------------C--------TTTHHHHHHHHHHHHHHHH-TTCCC
T ss_pred chhHHHHHhhcc-CCceEeeecchhhccCCcc--------------c--------HHHHHHHHhHHHHHHHHHh-CCCCE
Confidence 567788877776 5678999999977765432 1 2399999999998877755 49999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
+.|.|+.+.+++.... ........ .....+..+++++++..++.+.....
T Consensus 179 ~~I~pg~~~~~g~~~~------~~~~~~~~-----~G~~~~~~~~~~~~l~~~l~~~~~~~ 228 (259)
T d2fr1a1 179 TAVAWGTWAGSGMAEG------PVADRFRR-----HGVIEMPPETACRALQNALDRAEVCP 228 (259)
T ss_dssp EEEEECCBC------------------CTT-----TTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred EECCCCcccCCccccc------hHHHHHHh-----cCCCCCCHHHHHHHHHHHHhCCCceE
Confidence 9999999877653211 11111111 23345779999999999998765444
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.43 E-value=0.0016 Score=46.29 Aligned_cols=116 Identities=18% Similarity=0.156 Sum_probs=71.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++....+. +-.++|++||.++..+... . ..|+.||...+.+.+.++.+ +|++
T Consensus 127 ~~~~~~m~~~-~~G~IVnisS~~~~~~~~~--------------~--------~~Y~asKaal~~ltr~lA~el~~~gIr 183 (251)
T d2c07a1 127 QPISKRMINN-RYGRIINISSIVGLTGNVG--------------Q--------ANYSSSKAGVIGFTKSLAKELASRNIT 183 (251)
T ss_dssp HHHHHHHHHH-TCEEEEEECCTHHHHCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred hhcCcccccC-CCeEEEEECCHHhcCCCCC--------------C--------HHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 3344444555 3468999999844443211 1 34999999999999998765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..|.|+.|-.+-... ........+... .| ..-+...+|+|+++.+++... ...| ...+.|+
T Consensus 184 VN~V~PG~v~T~~~~~---~~~~~~~~~~~~---~p-l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 184 VNAIAPGFISSDMTDK---ISEQIKKNIISN---IP-AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp EEEEEECSBCC--------CCHHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEccCCEecccccc---cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 9999999996654322 223333333332 22 112667899999999998543 2345 4444443
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.22 E-value=0.0061 Score=43.65 Aligned_cols=123 Identities=17% Similarity=0.197 Sum_probs=74.1
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
++.++..+.+. +-.++|++||+++..+... ....|+.||...+.+.+.++.+ +|+
T Consensus 123 ~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~---------------------~~~~Y~asKaal~~lt~~lA~el~~~gI 180 (268)
T d2bgka1 123 AKHAARVMIPA-KKGSIVFTASISSFTAGEG---------------------VSHVYTATKHAVLGLTTSLCTELGEYGI 180 (268)
T ss_dssp HHHHHHHHGGG-TCEEEEEECCGGGTCCCTT---------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred hhhhcchHhhc-CCCCccccccccccccccc---------------------cccccchhHHHHHhCHHHHHHHhChhCe
Confidence 34455555555 4458999998744432211 0123999999999999988765 389
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
++..|.|+.|-.+-................... ..+ ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 181 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~-~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG 251 (268)
T d2bgka1 181 RVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA-ANL-KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG 251 (268)
T ss_dssp EEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT-CSS-CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEecCCCCccChHHhhhhcCCHHHHHHHHHhc-ccc-CCCCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence 999999999977654332222233332222111 011 112567899999999999542 3345 4555543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.13 E-value=0.0019 Score=45.54 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=68.6
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++....+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+ +|++
T Consensus 113 ~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~~~~gIr 169 (237)
T d1uzma1 113 QRASRSMQRN-KFGRMIFIGSVSGLWGIGN----------------------QANYAASKAGVIGMARSIARELSKANVT 169 (237)
T ss_dssp HHHHHHHHHT-TCEEEEEECCCCC-----C----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred hhhhhccccc-CCCceEEEcchhhccCCcc----------------------cHHHHHHHHHHHHHHHHHHhhhhcCCce
Confidence 4455555555 4468999999844432211 134999999999999888765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
+..|.|+.|.-+-... ..........+. .| ..-+...+|+|.++.+++... ...| ...+.|
T Consensus 170 VN~I~PG~v~T~~~~~---~~~~~~~~~~~~---~p-l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG 233 (237)
T d1uzma1 170 ANVVAPGYIDTDMTRA---LDERIQQGALQF---IP-AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDG 233 (237)
T ss_dssp EEEEEECSBCCHHHHH---SCHHHHHHHGGG---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred eeeeeeCcCCChhhhc---cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 9999999995432110 011111122111 22 112567899999999998543 2345 444444
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.0025 Score=45.04 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=70.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++....+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+ +|++
T Consensus 118 ~~~~~~m~~~-~~G~II~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~ela~~gIr 174 (243)
T d1q7ba_ 118 KAVMRAMMKK-RHGRIITIGSVVGTMGNGG----------------------QANYAAAKAGLIGFSKSLAREVASRGIT 174 (243)
T ss_dssp HHHHHHHHHH-TCEEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCCEeeeecchhhcCCCCC----------------------CHHHHHHHHHHHHHHHHHHHHhCccCeE
Confidence 3444454554 3368999999844433211 134999999999999988765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..+.|+.|--+-... ........+.+. .| ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 175 VN~I~PG~i~T~~~~~---~~~~~~~~~~~~---~p-l~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG 239 (243)
T d1q7ba_ 175 VNVVAPGFIETDMTRA---LSDDQRAGILAQ---VP-AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 239 (243)
T ss_dssp EEEEEECSBCCHHHHT---SCHHHHHHHHTT---CT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEecceEechhhhh---hhhhHHHHHHhc---CC-CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 9999999985432211 112222222222 22 112567999999999998643 2344 4445443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.0043 Score=44.14 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=71.6
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++....+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+. |+++
T Consensus 128 ~~~~~m~~~-~~g~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrV 184 (255)
T d1fmca_ 128 LVAPEMEKN-GGGVILTITSMAAENKNIN----------------------MTSYASSKAAASHLVRNMAFDLGEKNIRV 184 (255)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGTCCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred HHHhhhccc-cccccccccccchhccccc----------------------cccchhHHHHHHHHHHHHHHHhCccCeEE
Confidence 344444444 3357899999733332211 1349999999999998887653 8999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecCC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGSV 150 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~~ 150 (216)
..|-||.|-.+..... ........+.+. .| ..-+...+|+|.++..++... ...| ...+.|+.
T Consensus 185 N~I~PG~i~T~~~~~~--~~~e~~~~~~~~---~p-l~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 185 NGIAPGAILTDALKSV--ITPEIEQKMLQH---TP-IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp EEEEECSBCSHHHHTT--CCHHHHHHHHHT---CS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred EEeeeCcCcChHhhcc--CCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 9999999965432211 122333333332 12 112567899999999998542 3345 45555554
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.09 E-value=0.004 Score=44.41 Aligned_cols=115 Identities=18% Similarity=0.126 Sum_probs=67.8
Q ss_pred HHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEE
Q 027969 7 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVA 83 (216)
Q Consensus 7 l~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i 83 (216)
+....+. +..++|++||.++.-+.+ .. ..|+.+|...+.+.+.++++. |+++-+
T Consensus 127 ~~~m~~~-~~g~ii~isS~~~~~~~~--------------~~--------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~ 183 (258)
T d1ae1a_ 127 YPLLKAS-QNGNVIFLSSIAGFSALP--------------SV--------SLYSASKGAINQMTKSLACEWAKDNIRVNS 183 (258)
T ss_dssp HHHHHHH-TSEEEEEECCGGGTSCCT--------------TC--------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred ccccccc-cccccccccccccccccc--------------cc--------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 3334444 456899999983322211 01 349999999999999988753 799999
Q ss_pred EcCCCccCCCCCCCCC---ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCce-EEEec
Q 027969 84 IHPGTVIGPFFQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASGR-YLLAG 148 (216)
Q Consensus 84 lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 148 (216)
|.|+.+..+......+ .....+..+.... | ..-+...+|+|.++..++.. ....|. +.+.|
T Consensus 184 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---p-lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDG 250 (258)
T d1ae1a_ 184 VAPGVILTPLVETAIKKNPHQKEEIDNFIVKT---P-MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG 250 (258)
T ss_dssp EEECSBC-------------CHHHHHHHHHHS---T-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EeeCcccCcchhhhhhhhhhhHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence 9999997654322111 1223333333221 2 12278899999999999953 334453 44433
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.05 E-value=0.0028 Score=44.87 Aligned_cols=104 Identities=14% Similarity=0.078 Sum_probs=66.1
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~ 79 (216)
++.++..+.+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+. |+
T Consensus 118 ~~~~~~~m~~~-~~G~IVnisS~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~el~~~gI 174 (244)
T d1edoa_ 118 TQAATKIMMKK-RKGRIINIASVVGLIGNIG----------------------QANYAAAKAGVIGFSKTAAREGASRNI 174 (244)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHHc-CCcEEEEEcChhhcCCCCC----------------------CHHHHHHHHHHHHChHHHHHHHhhhCc
Confidence 34455555554 3358999999844443221 1349999999999999988754 89
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhc
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 136 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 136 (216)
++.+|.||.+--+-... ........+... .| ..-+...+|+|+++.+++.
T Consensus 175 rvN~I~PG~i~T~~~~~---~~~~~~~~~~~~---~p-l~R~~~p~dvA~~v~fLa~ 224 (244)
T d1edoa_ 175 NVNVVCPGFIASDMTAK---LGEDMEKKILGT---IP-LGRTGQPENVAGLVEFLAL 224 (244)
T ss_dssp EEEEEEECSBCSHHHHT---TCHHHHHHHHTS---CT-TCSCBCHHHHHHHHHHHHH
T ss_pred EEEEEecceeccHHHHH---hhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHHC
Confidence 99999999985432111 122233333222 12 1125678999999998863
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.04 E-value=0.0075 Score=42.75 Aligned_cols=119 Identities=16% Similarity=0.032 Sum_probs=71.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++...++. +-.++|++||.++..+... ...|+.||...+.+.+.++++. |++
T Consensus 112 ~~~~~~m~~~-~~G~IV~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~ela~~gIr 168 (252)
T d1zmta1 112 NAVASQMKKR-KSGHIIFITSATPFGPWKE----------------------LSTYTSARAGACTLANALSKELGEYNIP 168 (252)
T ss_dssp HHHHHHHHHH-TCCEEEEECCSTTTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHhhccc-ccceeeccccccccccccc----------------------ccccccccccHHHHHHHHHHHhcccCcE
Confidence 3344444454 3358999999833322110 1349999999999999887653 899
Q ss_pred EEEEcCCCccCCCCCCCCC-----ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILN-----FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
+..|.|+.|-.+....... ........+.+. .| ..-+...+|+|.++.+++.... ..| ...+.|+
T Consensus 169 VN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~---~p-l~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 169 VFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV---TA-LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp EEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH---SS-SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred EEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 9999999997654322110 112222222222 12 1126679999999999996432 344 4445443
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0018 Score=47.07 Aligned_cols=121 Identities=21% Similarity=0.228 Sum_probs=69.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++..+++. +-.++|++||+++..+.+. ...|+.||...+.+.+.++.+ +|++
T Consensus 123 ~~~lp~m~~~-~~G~Iv~isS~~g~~~~~~----------------------~~~Y~asKaal~~l~~~la~El~~~gIr 179 (285)
T d1jtva_ 123 QAFLPDMKRR-GSGRVLVTGSVGGLMGLPF----------------------NDVYCASKFALEGLCESLAVLLLPFGVH 179 (285)
T ss_dssp HHHHHHHHHH-TCEEEEEEEEGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHc-CCCceEEEechhhcCCCCC----------------------chHHHHHHHHHHHHHHHHHHHhhccCcE
Confidence 3444445555 4468999999855443321 134999999999998888765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHH--------HHHHHHcCCCCCC--CCCceeehhhhHHHHHHhhcCCCCCceEEEe
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAE--------VILNLINGDQSFA--FPYIFVEIRDVVYAHIRALEVPKASGRYLLA 147 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 147 (216)
+.++.||.|--+-.......... ...+..+...... ........+|+|++++.++..+.+.-+|+..
T Consensus 180 Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g 256 (285)
T d1jtva_ 180 LSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (285)
T ss_dssp EEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred EEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence 99999999854322111100000 0000000000000 0112456899999999999877655566543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.95 E-value=0.022 Score=40.01 Aligned_cols=84 Identities=18% Similarity=0.119 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+. |+++..|.|+.|--+-... ............ .| ..-+...+|+|.++.++
T Consensus 147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~---~p-l~R~~~pedia~~v~fL 219 (242)
T d1ulsa_ 147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK---VPEKVREKAIAA---TP-LGRAGKPLEVAYAALFL 219 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS---SCHHHHHHHHHT---CT-TCSCBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc---CCHHHHHHHHhc---CC-CCCCCCHHHHHHHHHHH
Confidence 49999999999998887653 8999999999996554322 222333333332 12 11255789999999999
Q ss_pred hcC--CCCCc-eEEEec
Q 027969 135 LEV--PKASG-RYLLAG 148 (216)
Q Consensus 135 ~~~--~~~~~-~~~~~~ 148 (216)
+.. ....| ...+.|
T Consensus 220 ~S~~s~~itG~~i~vDG 236 (242)
T d1ulsa_ 220 LSDESSFITGQVLFVDG 236 (242)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hchhhCCCCCcEEEECC
Confidence 854 33345 344443
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0058 Score=43.14 Aligned_cols=107 Identities=20% Similarity=0.144 Sum_probs=66.3
Q ss_pred CccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccC
Q 027969 15 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIG 91 (216)
Q Consensus 15 ~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 91 (216)
+-.++|++||.++..+.+. ...|+.||...+.+.+.++.+ .|+++..|.|+.|.-
T Consensus 127 ~~g~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T 184 (244)
T d1pr9a_ 127 VPGAIVNVSSQCSQRAVTN----------------------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMT 184 (244)
T ss_dssp CCEEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred CcceEeecccccccccccc----------------------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcC
Confidence 4468999999833332211 134999999999999988765 389999999999865
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 92 PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
+-..... ..........+. .| ..-+...+|+|.++.+++... ...| ...+.|
T Consensus 185 ~~~~~~~-~~~~~~~~~~~~---~p-l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG 239 (244)
T d1pr9a_ 185 SMGQATW-SDPHKAKTMLNR---IP-LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG 239 (244)
T ss_dssp HHHHTTS-CSHHHHHHHHTT---CT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hHHhhhc-cChHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECc
Confidence 4322111 112233333332 22 123667999999999988542 3344 344443
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.93 E-value=0.0083 Score=42.51 Aligned_cols=118 Identities=14% Similarity=0.074 Sum_probs=69.5
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||..+-..... ....|+.||...+.+.+.++.+ +|++
T Consensus 123 ~~~~~~m~~~-~~G~Ii~i~S~~~~~~~~~---------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIr 180 (251)
T d1vl8a_ 123 REAFSLLRES-DNPSIINIGSLTVEEVTMP---------------------NISAYAASKGGVASLTKALAKEWGRYGIR 180 (251)
T ss_dssp HHHHHHHTTC-SSCEEEEECCGGGTCCCSS---------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred hhhhhccccc-ccccccccccchhccccCc---------------------cccchHHHHHhHHHHHHHHHHHhcccCeE
Confidence 4444555555 4458999998622221110 0134999999999999988765 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
+..|.|+.|-.+-..... ........+.+. .| ..-+...+|+|+++.+++... ...| ...+.|
T Consensus 181 VN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~---~p-l~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG 246 (251)
T d1vl8a_ 181 VNVIAPGWYRTKMTEAVF-SDPEKLDYMLKR---IP-LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG 246 (251)
T ss_dssp EEEEEECCBCSTTTHHHH-TCHHHHHHHHHT---CT-TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EEEEeeCcccCHHHHhcc-CCHHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence 999999999654322100 112233333322 12 112556899999999988542 2344 444443
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=96.89 E-value=0.007 Score=42.77 Aligned_cols=118 Identities=16% Similarity=0.037 Sum_probs=65.4
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||.++..+... ...|+.||...+.+.+.++.+ +|++
T Consensus 120 ~~~~~~m~~~-~~G~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~ela~~gIr 176 (247)
T d2ew8a1 120 KAFVPGMKRN-GWGRIINLTSTTYWLKIEA----------------------YTHYISTKAANIGFTRALASDLGKDGIT 176 (247)
T ss_dssp HHHHHHHHHH-TCEEEEEECCGGGGSCCSS----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHhHHHhc-CCCCccccccchhcccCcc----------------------cccchhhhccHHHHHHHHHHHhcccCeE
Confidence 4445555555 3468999999843332211 134999999999999888764 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..|.|+.|-.+...... ........ .. ...+ ..-+...+|+|+++.+++... ...| ...+.|+
T Consensus 177 VN~I~PG~i~T~~~~~~~--~~~~~~~~-~~-~~~~-l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 177 VNAIAPSLVRTATTEASA--LSAMFDVL-PN-MLQA-IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 243 (247)
T ss_dssp EEEEEECCC---------------------C-TTSS-SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred EEEEeeCCCCCccccccc--cchhHHHH-HH-Hhcc-CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 999999998654322110 00000000 00 0011 112567899999999998642 2344 4455444
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.88 E-value=0.0083 Score=42.31 Aligned_cols=110 Identities=19% Similarity=0.146 Sum_probs=68.3
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++....+. +-.++|++||.++..+... ...|+.+|...+.+.+.++++. |+++
T Consensus 121 ~~~~~m~~~-~~G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~el~~~gIrV 177 (244)
T d1nffa_ 121 AVVKPMKEA-GRGSIINISSIEGLAGTVA----------------------CHGYTATKFAVRGLTKSTALELGPSGIRV 177 (244)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHhHHHhc-CcceEEecccccccccccc----------------------ccchhhHHHHHHHHHHHHHHHhcccCEEE
Confidence 344444444 3358999999843332211 1349999999999999988654 8999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~~~~~ 149 (216)
..|-|+.|-.+-... +.+.....| ..-+...+|+|+++.+++.. ....| .+.+.|+
T Consensus 178 N~I~PG~i~T~~~~~-----------~~~~~~~~p-l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG 236 (244)
T d1nffa_ 178 NSIHPGLVKTPMTDW-----------VPEDIFQTA-LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 236 (244)
T ss_dssp EEEEECCBCSGGGTT-----------SCTTCSCCS-SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEeeCCccChhHhh-----------hhHHHHhcc-ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence 999999885443211 000001122 12367899999999999853 23344 4555443
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=96.86 E-value=0.019 Score=40.69 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=67.8
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~ 80 (216)
+.++...++. +-.++|++||.++..+... ...|+.||...+.+.+.++.+ +|++
T Consensus 119 ~~~~p~m~~~-~~G~II~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~a~~gIr 175 (254)
T d1hdca_ 119 KTVIPAMKDA-GGGSIVNISSAAGLMGLAL----------------------TSSYGASKWGVRGLSKLAAVELGTDRIR 175 (254)
T ss_dssp HHHHHHHHHH-TCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHhhc-CCCeecccccchhcccccc----------------------hhhHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 3344444454 4468999999844432211 134999999999999998865 3899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC--CCCC-CCCc-e-eehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYI-F-VEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~-~-i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..|.|+.|--+ ++....... .... .... + +..+|+|.++.+++... ...| .+.+.|+
T Consensus 176 VN~I~PG~v~T~-----------~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG 241 (254)
T d1hdca_ 176 VNSVHPGMTYTP-----------MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp EEEEEECSBCCH-----------HHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEeeeCcccCc-----------cchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence 999999998432 122222111 1111 1111 2 35799999999998542 2345 4555544
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.84 E-value=0.011 Score=42.01 Aligned_cols=107 Identities=18% Similarity=0.096 Sum_probs=64.8
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+.+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+. |++
T Consensus 123 ~~~~~~m~~~-~~G~II~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~el~~~gIr 179 (260)
T d1zema1 123 KAVSRQMITQ-NYGRIVNTASMAGVKGPPN----------------------MAAYGTSKGAIIALTETAALDLAPYNIR 179 (260)
T ss_dssp HHHHHHHHHH-TCEEEEEECCHHHHSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred hhHHhhhhhh-cCCCCCeeechhhccCCcc----------------------hHHHHHHHHHHHHHHHHHHHHhhhhCCE
Confidence 3344444444 3368999999844443211 1349999999999999887654 799
Q ss_pred EEEEcCCCccCCCCC------------CCCCccH-HHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 81 LVAIHPGTVIGPFFQ------------PILNFGA-EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+..|.|+.|-.+-.. ....... .....+... .| ..-+...+|+|.++.+++..
T Consensus 180 VN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P-l~R~g~pedvA~~v~fL~S~ 245 (260)
T d1zema1 180 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS---VP-MRRYGDINEIPGVVAFLLGD 245 (260)
T ss_dssp EEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT---ST-TSSCBCGGGSHHHHHHHHSG
T ss_pred EEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCc
Confidence 999999998643210 0000111 122222222 11 11256789999999999964
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.75 E-value=0.0057 Score=43.59 Aligned_cols=118 Identities=18% Similarity=0.118 Sum_probs=67.2
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++...++. +-.++|++||.++..+... . ..|+.||...+.+.+.++.+. |++
T Consensus 123 ~~~~~~m~~~-~~G~Iv~isS~~~~~~~~~--------------~--------~~Y~asKaal~~lt~~lA~el~~~gIr 179 (260)
T d1x1ta1 123 AAALPHMKKQ-GFGRIINIASAHGLVASAN--------------K--------SAYVAAKHGVVGFTKVTALETAGQGIT 179 (260)
T ss_dssp HHHHHHHHHH-TCEEEEEECCGGGTSCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred chhhhhHhhc-CCceEeecccccceeccCC--------------c--------chhhhhhhhHHHhHHHHHHHhchhCcE
Confidence 4445555555 3358999999844443221 1 349999999999999987753 899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCC---------CCCCCCCceeehhhhHHHHHHhhcC--CCCCc-eEEEec
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD---------QSFAFPYIFVEIRDVVYAHIRALEV--PKASG-RYLLAG 148 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~~~~ 148 (216)
+..|.|+.|--+-.... ............ ...| ..-+...+|+|.++.+++.. ....| ...+.|
T Consensus 180 VN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P-l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDG 255 (260)
T d1x1ta1 180 ANAICPGWVRTPLVEKQ---ISALAEKNGVDQETAARELLSEKQP-SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp EEEEEECCBCC---------------------------CHHHHCT-TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EEEEecCCCCChhhhhh---hhhhhhhcCCChHHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence 99999999854432111 000000000000 0011 12367899999999999854 23344 344444
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.74 E-value=0.0096 Score=42.42 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=68.7
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++....+.+.-..+|++||.+...+... . ..|+.||...+.+.+.++.+. |++
T Consensus 125 ~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~--------------~--------~~Y~asKaal~~lt~~lA~e~~~~gIr 182 (261)
T d1geea_ 125 REAIKYFVENDIKGTVINMSSVHEKIPWPL--------------F--------VHYAASKGGMKLMTETLALEYAPKGIR 182 (261)
T ss_dssp HHHHHHHHHTTCCCEEEEECCGGGTSCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHhhhhccccccccccccccchhcccCcc--------------c--------cccccCCccchhhHHHHHHHhhhhCcE
Confidence 344444444423346888999733322111 1 349999999999998887653 899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+..|.|+.|--+-..... ........+.+ ..| ..-+...+|+|.++.+++... ...| .+.+.|+
T Consensus 183 VN~I~PG~v~T~~~~~~~-~~~~~~~~~~~---~~p-l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 249 (261)
T d1geea_ 183 VNNIGPGAINTPINAEKF-ADPEQRADVES---MIP-MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp EEEEEECSBCSGGGHHHH-HSHHHHHHHHT---TCT-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEEEeeCcCcCHhHhhhc-CCHHHHHHHHh---cCC-CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 999999999544321000 00111122211 122 112567899999999998542 2344 4455443
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.73 E-value=0.0099 Score=41.78 Aligned_cols=98 Identities=12% Similarity=0.212 Sum_probs=64.0
Q ss_pred HHHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCC
Q 027969 3 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGI 79 (216)
Q Consensus 3 t~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~ 79 (216)
++.++..+++. +-.++|++||.++..+.+. ...|+.||...+.+.+.++.+ .|+
T Consensus 124 ~~~~~~~m~~~-~~G~Ii~isS~~~~~~~~~----------------------~~~Y~asK~al~~lt~~la~el~~~gI 180 (240)
T d2bd0a1 124 TQALFALMERQ-HSGHIFFITSVAATKAFRH----------------------SSIYCMSKFGQRGLVETMRLYARKCNV 180 (240)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHTTTTE
T ss_pred HHHHhHHHHhc-CCCceEEEechhhcCCCCC----------------------ChHHHHHHHHHHHHHHHHHHHhCcCCe
Confidence 34455555555 3358999999844332211 134999999999988887764 489
Q ss_pred cEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCC
Q 027969 80 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 139 (216)
Q Consensus 80 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 139 (216)
++..+.||.|--+-.... . .. ....+...+|+|+++..++..+.
T Consensus 181 rvn~i~PG~v~T~~~~~~------------~--~~--~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 181 RITDVQPGAVYTPMWGKV------------D--DE--MQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp EEEEEEECCBCSTTTCCC------------C--ST--TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred EEEEeeeCcccCchhhhc------------C--Hh--hHhcCCCHHHHHHHHHHHHcCCc
Confidence 999999999854321110 0 00 11224568999999999997653
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=96.73 E-value=0.017 Score=40.75 Aligned_cols=118 Identities=16% Similarity=0.080 Sum_probs=66.6
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+++. +-.++|++||.++..+... ...|+.||...+.+.+.++++. |+++
T Consensus 117 ~~~p~m~~~-~~G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~el~~~gIrV 173 (248)
T d2d1ya1 117 LAAREMRKV-GGGAIVNVASVQGLFAEQE----------------------NAAYNASKGGLVNLTRSLALDLAPLRIRV 173 (248)
T ss_dssp HHHHHHHTT-TCEEEEEECCGGGTSBCTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred hhccccccc-ccccccccccccccccccc----------------------cchhHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 344444444 4468999999844332211 1349999999999998887653 8999
Q ss_pred EEEcCCCccCCCCCCC--CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEec
Q 027969 82 VAIHPGTVIGPFFQPI--LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 148 (216)
..|.|+.|-.+..... .........+.... ..| ..-+...+|+|.++.+++... ...| .+.+.|
T Consensus 174 N~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~p-l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG 242 (248)
T d2d1ya1 174 NAVAPGAIATEAVLEAIALSPDPERTRRDWED--LHA-LRRLGKPEEVAEAVLFLASEKASFITGAILPVDG 242 (248)
T ss_dssp EEEEECSBCCHHHHHHHC--------CHHHHT--TST-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EEEeeCCCCCchHHHHhhcCCCHHHHHHHHHh--cCC-CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence 9999999843221000 00000000000011 111 112667999999999998542 2344 445543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.63 E-value=0.0062 Score=43.38 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=54.0
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++...++. +-.++|++||.++..+... ...|+.||...+.+.+.++.+. |+++
T Consensus 127 ~~~~~m~~~-~~G~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrV 183 (259)
T d1xq1a_ 127 LAHPLLKAS-GCGNIIFMSSIAGVVSASV----------------------GSIYSATKGALNQLARNLACEWASDGIRA 183 (259)
T ss_dssp HHHHHHHHH-SSCEEEEEC--------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred hhhhccccc-ccccccccccccccccccc----------------------cccccccccchhhhhHHHHHHhcccCeEE
Confidence 344444444 3458999999833332211 1239999999999998887653 8999
Q ss_pred EEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 82 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
-.|-|+.|-.+-.... ...-..+... ...| ..-+...+|+|.++.+++..
T Consensus 184 N~V~PG~i~T~~~~~~---~~~~~~~~~~--~~~p-l~R~~~pedvA~~v~fL~S~ 233 (259)
T d1xq1a_ 184 NAVAPAVIATPLAEAV---YDDEFKKVVI--SRKP-LGRFGEPEEVSSLVAFLCMP 233 (259)
T ss_dssp EEEECCSCC-------------------------------CCGGGGHHHHHHHTSG
T ss_pred EEeccCcccCHHhhhh---chHHHHHHHH--hCCC-CCCCcCHHHHHHHHHHHhCc
Confidence 9999999854432110 0000000000 1112 11256789999999999853
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.014 Score=41.28 Aligned_cols=87 Identities=20% Similarity=0.037 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+..+++. |+++-.|+|+.|..+-..... ............ .| ..-+...+|+|.++..+
T Consensus 157 ~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~---~p-l~R~~~peeia~~v~fL 231 (258)
T d1qsga_ 157 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAV---TP-IRRTVTIEDVGNSAAFL 231 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHH---ST-TSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc-hhhhHHHHHHhC---CC-CCCCcCHHHHHHHHHHH
Confidence 39999999999999988754 799999999999765433211 112222222221 12 11256789999999999
Q ss_pred hcCC--CCCc-eEEEecC
Q 027969 135 LEVP--KASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~~ 149 (216)
+... ...| ...+.|+
T Consensus 232 ~s~~s~~itG~~i~vDGG 249 (258)
T d1qsga_ 232 CSDLSAGISGEVVHVDGG 249 (258)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCchhcCccCceEEECcC
Confidence 9643 3445 3444443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.58 E-value=0.024 Score=39.50 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=69.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++...++. +-.++|++||. ....... ....|+.+|...+.+.+.++++. |++
T Consensus 106 ~~~~~~m~~~-~~G~ii~i~S~-~~~~~~~---------------------~~~~Y~asKaal~~ltk~lA~ela~~gIr 162 (234)
T d1o5ia_ 106 RNYLPAMKEK-GWGRIVAITSF-SVISPIE---------------------NLYTSNSARMALTGFLKTLSFEVAPYGIT 162 (234)
T ss_dssp HHHHHHHHHH-TCEEEEEECCG-GGTSCCT---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred hccccccccc-ccccccccccc-ccccccc---------------------ccccchhHHHHHHHHHHHHHHHhcccCeE
Confidence 4444555555 44579999987 3332111 11349999999999888887653 899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+-.|.|+.+-.+..... ........+.+. .| ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 163 VN~I~PG~v~T~~~~~~--~~~~~~~~~~~~---~p-l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 228 (234)
T d1o5ia_ 163 VNCVAPGWTETERVKEL--LSEEKKKQVESQ---IP-MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 228 (234)
T ss_dssp EEEEEECSBCCTTHHHH--SCHHHHHHHHTT---ST-TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EeecccCccchhhhhhh--cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence 99999999855432110 011112222221 22 122677999999999998542 2344 4445443
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.57 E-value=0.017 Score=40.87 Aligned_cols=108 Identities=15% Similarity=0.033 Sum_probs=62.9
Q ss_pred HHHHHHHHhcc-CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---C
Q 027969 3 TLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---G 78 (216)
Q Consensus 3 t~~ll~~~~~~-~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~ 78 (216)
+..+++++... .+-.++|++||.++..+.+. ...|+.||...+.+.+.++.+. |
T Consensus 125 ~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltr~lA~ela~~g 182 (256)
T d1ulua_ 125 LVAVARRAEPLLREGGGIVTLTYYASEKVVPK----------------------YNVMAIAKAALEASVRYLAYELGPKG 182 (256)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhccCCEEEEEeehHhcCCCCC----------------------chHHHHHHHHHHHHHHHHHHHhcccC
Confidence 34455554432 11247899999733332211 1349999999999999888753 8
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+++-.+.|+.|.-+...... ..........+.. | ..-+...+|+|.++.+++..
T Consensus 183 IrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~---p-l~R~~~pedvA~~v~fL~S~ 236 (256)
T d1ulua_ 183 VRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTA---P-LRRNITQEEVGNLGLFLLSP 236 (256)
T ss_dssp CEEEEEEECCC-----------CHHHHHHHHHHS---T-TSSCCCHHHHHHHHHHHHSG
T ss_pred CEEeeeccceeeeccccchh-hhHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCc
Confidence 99999999998765433211 1223333332221 1 11256789999999999964
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.56 E-value=0.013 Score=40.87 Aligned_cols=106 Identities=21% Similarity=0.169 Sum_probs=68.2
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 92 (216)
-.++|++||.++..+... ...|+.+|...+.+.+.++.+ +|+++..|.|+.|--+
T Consensus 126 ~G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~ 183 (241)
T d1uaya_ 126 RGVIVNTASVAAFEGQIG----------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183 (241)
T ss_dssp SEEEEEECCTHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred ceeeeeecchhhccCCCC----------------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence 358999999844443221 134999999999999998875 3899999999999654
Q ss_pred CCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 149 (216)
.... .............+..+ -+...+|+|.++.++++.+...| ...+.|+
T Consensus 184 ~~~~---~~~~~~~~~~~~~~~~~---R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG 235 (241)
T d1uaya_ 184 LLQG---LPEKAKASLAAQVPFPP---RLGRPEEYAALVLHILENPMLNGEVVRLDGA 235 (241)
T ss_dssp HHHT---SCHHHHHHHHTTCCSSC---SCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred ccch---hhhhHHHHHHhcCCCCC---CCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence 3221 12223333333222111 24568999999999998665556 3445443
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.0086 Score=42.19 Aligned_cols=98 Identities=20% Similarity=0.220 Sum_probs=59.8
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.++..+... . ..|+.||...+.+.+.++++. |+++..|.||.+--+-
T Consensus 143 G~Ii~isS~~~~~~~~~--------------~--------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~ 200 (248)
T d2o23a1 143 GVIINTASVAAFEGQVG--------------Q--------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 200 (248)
T ss_dssp EEEEEECCTHHHHCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred eEEEEecchhhccCCCC--------------c--------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence 37999999844332211 1 349999999999999988754 7999999999986443
Q ss_pred CCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc
Q 027969 94 FQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 142 (216)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 142 (216)
... ..........+. +|-..-+...+|+|+++..+++.+...|
T Consensus 201 ~~~---~~~~~~~~~~~~---~pl~~R~g~peevA~~v~fL~s~~~itG 243 (248)
T d2o23a1 201 LTS---LPEKVCNFLASQ---VPFPSRLGDPAEYAHLVQAIIENPFLNG 243 (248)
T ss_dssp ------------CHHHHT---CSSSCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred hhc---CCHHHHHHHHhc---CCCCCCCcCHHHHHHHHHHHHhCCCCCc
Confidence 221 011111111111 1101125678999999999987554444
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.44 E-value=0.015 Score=41.21 Aligned_cols=104 Identities=15% Similarity=0.116 Sum_probs=64.5
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 93 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 93 (216)
.++|++||.++..+... ...|+.||.....+.+.++.+ .|+++..|.||.|..+-
T Consensus 131 g~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~ 188 (254)
T d1sbya1 131 GIIANICSVTGFNAIHQ----------------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp EEEEEECCGGGTSCCTT----------------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred ceEEEEechhhccCCCC----------------------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence 57999999844443221 123999999999988887764 38999999999996531
Q ss_pred CCC--CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCceEEEecC
Q 027969 94 FQP--ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 149 (216)
Q Consensus 94 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 149 (216)
... ........+.... -.......+++|++++.+++....+..+.+.|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG 239 (254)
T d1sbya1 189 VHTFNSWLDVEPRVAELL-------LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHSCCCGGGSCTTHHHHH-------TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred ccccccchhHHHHHHhcc-------ccCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence 100 0000001111111 122355789999999998877654446666654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.35 E-value=0.02 Score=40.65 Aligned_cols=118 Identities=16% Similarity=0.099 Sum_probs=69.5
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++....+. +-.++|++||.++..+... ...|+.||...+.+.+.++.+. |+++
T Consensus 127 ~~~~~m~~~-~~G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrV 183 (259)
T d2ae2a_ 127 LAHPFLKAS-ERGNVVFISSVSGALAVPY----------------------EAVYGATKGAMDQLTRCLAFEWAKDNIRV 183 (259)
T ss_dssp HHHHHHHHT-SSEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred eccchhhhh-ccccccccccccccccccc----------------------ccchHHHHHHHHHHHHHHHHHhCcCceEE
Confidence 334444444 3458999999833332111 1349999999999999988753 8999
Q ss_pred EEEcCCCccCCCCCCCCC--ccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 82 VAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 82 ~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
..|.|+.|--+-...... .....+.++... .| ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---~p-l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDR---CA-LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp EEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT---ST-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEeeeCcccCHHHHhhhhchhhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 999999985432111000 011222333222 22 112567899999999998643 2344 4444443
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.35 E-value=0.027 Score=39.88 Aligned_cols=116 Identities=20% Similarity=0.142 Sum_probs=67.9
Q ss_pred HHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE
Q 027969 6 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 82 (216)
Q Consensus 6 ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ 82 (216)
++...++. +-.++|++||.++..+.+. ...|+.||...+.+.+.++.+. |+++.
T Consensus 126 ~~~~m~~~-~~G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN 182 (258)
T d1iy8a_ 126 VLKIMREQ-GSGMVVNTASVGGIRGIGN----------------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRIN 182 (258)
T ss_dssp HHHHHHHH-TCCEEEEECCGGGTSBCSS----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred hHhhhhhh-cCCCCcccccHhhccCCCC----------------------chHHHHHHHHHHHHHHHHHHHhCccCceEE
Confidence 33444444 3358999999844433211 1349999999999998887643 89999
Q ss_pred EEcCCCccCCCCCC-----CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCc-eEEEec
Q 027969 83 AIHPGTVIGPFFQP-----ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG-RYLLAG 148 (216)
Q Consensus 83 ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~~~~ 148 (216)
.|.|+.|..+-... ...........+... .| ..-+...+|+|.++.+++.. ....| ...+.|
T Consensus 183 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~p-l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG 252 (258)
T d1iy8a_ 183 AIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---NP-SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG 252 (258)
T ss_dssp EEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT---CT-TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred EEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence 99999985432100 000011122222221 22 11256789999999999964 23344 344443
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.20 E-value=0.024 Score=39.97 Aligned_cols=85 Identities=19% Similarity=0.264 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
.|+.||...+.+.+.++.+ +|+++..|.|+.|-.+-.... ....... ......| ..-+...+|+|.++.
T Consensus 154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~---~~~~~~p-l~R~~~pedvA~~v~ 227 (251)
T d1zk4a1 154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--PGAEEAM---SQRTKTP-MGHIGEPNDIAYICV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS--TTHHHHH---TSTTTCT-TSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc--CCHHHHH---HHHhCCC-CCCCcCHHHHHHHHH
Confidence 4999999999988876643 479999999999954322111 0111111 1111223 112678999999999
Q ss_pred HhhcCC--CCCc-eEEEec
Q 027969 133 RALEVP--KASG-RYLLAG 148 (216)
Q Consensus 133 ~~~~~~--~~~~-~~~~~~ 148 (216)
+++... ...| .+.+.|
T Consensus 228 fL~S~~s~~itG~~i~vDG 246 (251)
T d1zk4a1 228 YLASNESKFATGSEFVVDG 246 (251)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhCCCcCcEEEECc
Confidence 998542 2344 444444
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.20 E-value=0.016 Score=40.70 Aligned_cols=87 Identities=22% Similarity=0.210 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+.+.++.+. |+++..|-|+.|-.+-.... .........+.+. .| ..-+...+|+|+++.++
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~---~p-l~R~~~peeva~~v~fL 220 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-SADPEFARKLKER---HP-LRKFAEVEDVVNSILFL 220 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-TCCHHHHHHHHHH---ST-TSSCBCHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh-cCCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHH
Confidence 49999999999999987753 79999999999864321100 0111222222221 11 12267789999999999
Q ss_pred hcC--CCCCc-eEEEecC
Q 027969 135 LEV--PKASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~--~~~~~-~~~~~~~ 149 (216)
+.. ....| .+.+.|+
T Consensus 221 ~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 221 LSDRSASTSGGGILVDAG 238 (242)
T ss_dssp HSGGGTTCCSSEEEESTT
T ss_pred hCchhcCcCCceEEeCcc
Confidence 854 22344 4445443
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.14 E-value=0.034 Score=39.20 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=68.1
Q ss_pred HHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE
Q 027969 5 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDL 81 (216)
Q Consensus 5 ~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~ 81 (216)
.++..+++. + .++|++||.++..+... ...|+.+|...+.+.+.++.+. |+++
T Consensus 121 ~~~p~m~~~-~-G~Ii~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~a~~gIrV 176 (250)
T d1ydea1 121 LALPYLRKS-Q-GNVINISSLVGAIGQAQ----------------------AVPYVATKGAVTAMTKALALDESPYGVRV 176 (250)
T ss_dssp HHHHHHHHH-T-CEEEEECCHHHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred HhhHHHHhC-C-CCCcccccccccccccC----------------------cchhHHHHhhHHHHHHHHHHHhcccCeEE
Confidence 344444444 3 48999999844432211 1349999999999999887753 8999
Q ss_pred EEEcCCCccCCCCC---CCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC-CCCCc-eEEEec
Q 027969 82 VAIHPGTVIGPFFQ---PILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-PKASG-RYLLAG 148 (216)
Q Consensus 82 ~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~ 148 (216)
..|.|+.|--+-.. .........+...... .| ..-+...+|+|.++.+++.. ....| .+.+.|
T Consensus 177 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---~p-l~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG 244 (250)
T d1ydea1 177 NCISPGNIWTPLWEELAALMPDPRASIREGMLA---QP-LGRMGQPAEVGAAAVFLASEANFCTGIELLVTG 244 (250)
T ss_dssp EEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT---ST-TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred EEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhc---CC-CCCCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence 99999998432110 0000111222222222 12 12367899999999998853 22344 444443
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.14 E-value=0.05 Score=38.37 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=63.3
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 92 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 92 (216)
-.++|++||.++..+... ...|+.||...+.+.+.++.+. |+++..|.||.+-.+
T Consensus 131 ~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 131 GGKIINMASQAGRRGEAL----------------------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp CEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred CCccccccchhhcccccc----------------------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCch
Confidence 358999999833332211 1349999999999998887643 899999999988654
Q ss_pred CCCCCCCccHHHHHHHHc--CC--C--------CCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 93 FFQPILNFGAEVILNLIN--GD--Q--------SFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~--~~--~--------~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
-.. ........ +. . ..| ..-+...+|+|.++.+++... ...| ...+.|+
T Consensus 189 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~P-lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 189 HWD-------GVDAKFADYENLPRGEKKRQVGAAVP-FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp THH-------HHHHHHHHHHTCCTTHHHHHHHHHST-TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred hhh-------hhhhhhhhhccCChHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence 311 11111110 00 0 001 112667999999999988542 3344 4455443
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.01 E-value=0.096 Score=36.85 Aligned_cols=89 Identities=19% Similarity=0.105 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC---------CCCCCCccHHHHHHHHcCCCCCCCCCceeehh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF---------FQPILNFGAEVILNLINGDQSFAFPYIFVEIR 125 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 125 (216)
.|+.+|...+.+.+.++++ .|+++..|.||.+--+- ...........+....... .| ..-+...+
T Consensus 154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-l~R~g~p~ 230 (259)
T d1ja9a_ 154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM--NP-LKRIGYPA 230 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT--ST-TSSCBCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC--CC-CCCCcCHH
Confidence 3999999999999988775 38999999999985321 0011112222222222221 11 12367899
Q ss_pred hhHHHHHHhhcCCC--CCc-eEEEecC
Q 027969 126 DVVYAHIRALEVPK--ASG-RYLLAGS 149 (216)
Q Consensus 126 D~a~~~~~~~~~~~--~~~-~~~~~~~ 149 (216)
|+++++.+++.... ..| ...+.|+
T Consensus 231 eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 231 DIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 99999999996533 344 4445454
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.01 E-value=0.026 Score=39.93 Aligned_cols=122 Identities=18% Similarity=0.124 Sum_probs=71.1
Q ss_pred cHHHHHHHHhcc-----CCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 027969 2 GTLNVLRSCAKV-----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 76 (216)
Q Consensus 2 gt~~ll~~~~~~-----~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 76 (216)
|+..+.+++.++ .+-.++|.+||.++..+... ...|+.||...+.+.+.++.+
T Consensus 113 g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~----------------------~~~Y~asKaal~~ltk~lA~e 170 (257)
T d2rhca1 113 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH----------------------AAPYSASKHGVVGFTKALGLE 170 (257)
T ss_dssp HHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhHHHHHHhcCCccccccccccccccccc----------------------chhHHHHHHHHHHHHHHHHHH
Confidence 455566655431 14457999999744333211 134999999999999998876
Q ss_pred c---CCcEEEEcCCCccCCCCCC--------CCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC--CCCCc-
Q 027969 77 N---GIDLVAIHPGTVIGPFFQP--------ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG- 142 (216)
Q Consensus 77 ~---~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~- 142 (216)
. |+++..|.|+.|--+-... ...........+.+. .| ..-+...+|+|.++.+++.. ....|
T Consensus 171 l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~P-lgR~~~pedia~~v~fL~S~~s~~itG~ 246 (257)
T d2rhca1 171 LARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR---VP-IGRYVQPSEVAEMVAYLIGPGAAAVTAQ 246 (257)
T ss_dssp TTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT---ST-TSSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred hhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHhCchhcCCcCc
Confidence 4 7899999999984321100 000011122222221 12 11267799999999999953 33344
Q ss_pred eEEEecC
Q 027969 143 RYLLAGS 149 (216)
Q Consensus 143 ~~~~~~~ 149 (216)
...+.|+
T Consensus 247 ~i~vDGG 253 (257)
T d2rhca1 247 ALNVCGG 253 (257)
T ss_dssp EEEESTT
T ss_pred eEEECcC
Confidence 4445444
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.032 Score=39.14 Aligned_cols=88 Identities=18% Similarity=0.161 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCC---CCccHHHHHHHHcCCCCCCCCCceeehhhhHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 130 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 130 (216)
..|+.+|...+.+++.++.+. |+++..|.||.|-.+..... ..........+... .| ..-+...+|++++
T Consensus 145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---~p-l~R~~~pedva~~ 220 (245)
T d2ag5a1 145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR---QK-TGRFATAEEIAML 220 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT---CT-TSSCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhc---CC-CCCCcCHHHHHHH
Confidence 349999999999999988753 89999999999865432100 00111122222222 11 1237788999999
Q ss_pred HHHhhcCC--CCCc-eEEEec
Q 027969 131 HIRALEVP--KASG-RYLLAG 148 (216)
Q Consensus 131 ~~~~~~~~--~~~~-~~~~~~ 148 (216)
+..++... ...| ...+.|
T Consensus 221 v~fL~s~~s~~iTG~~i~VDG 241 (245)
T d2ag5a1 221 CVYLASDESAYVTGNPVIIDG 241 (245)
T ss_dssp HHHHHSGGGTTCCSCEEEECT
T ss_pred HHHHhChhhCCCcCceEEeCC
Confidence 99999643 3345 344443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=95.89 E-value=0.075 Score=38.13 Aligned_cols=88 Identities=15% Similarity=0.032 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...+.+.+.++.+. |+++-+|.||.|-.+................... .| ..-+...+|+|.++..+
T Consensus 175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---~p-l~R~~~pediA~~v~fL 250 (294)
T d1w6ua_ 175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR---IP-CGRLGTVEELANLAAFL 250 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT---CT-TSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhc---CC-CCCCCCHHHHHHHHHHH
Confidence 49999999999999888653 8999999999997654322111122233333332 12 11255689999999999
Q ss_pred hcCC--CCCc-eEEEecC
Q 027969 135 LEVP--KASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~~ 149 (216)
+... ...| ...+.|+
T Consensus 251 ~sd~s~~itG~~i~vDGG 268 (294)
T d1w6ua_ 251 CSDYASWINGAVIKFDGG 268 (294)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCchhcCCCCcEEEECCC
Confidence 9643 2445 4444443
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.019 Score=41.66 Aligned_cols=88 Identities=15% Similarity=0.075 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCC-CCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.+|...+.+.+..+.+. |+++-.|.|+.|..+.......... ....+.. ...| ..-+...+|+|.++.+
T Consensus 164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~p-lgR~g~pedvA~~v~f 239 (297)
T d1yxma1 164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG---QSFFEGSFQKIP-AKRIGVPEEVSSVVCF 239 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG---GGGGTTGGGGST-TSSCBCTHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC---HHHHHHHHhcCC-CCCCcCHHHHHHHHHH
Confidence 49999999999999988654 8999999999997654322111110 1111111 1122 1125678999999999
Q ss_pred hhcC--CCCCc-eEEEecC
Q 027969 134 ALEV--PKASG-RYLLAGS 149 (216)
Q Consensus 134 ~~~~--~~~~~-~~~~~~~ 149 (216)
++.. ....| ...+.|+
T Consensus 240 L~Sd~s~~iTG~~i~VDGG 258 (297)
T d1yxma1 240 LLSPAASFITGQSVDVDGG 258 (297)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCcCCcEEEeCcC
Confidence 9954 23345 4455444
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.86 E-value=0.032 Score=39.83 Aligned_cols=90 Identities=13% Similarity=0.212 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCC--CccHHHHHHHHcCC-CCCC-CCCceeehhhhHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYA 130 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~ 130 (216)
.|+.+|...+.+.+..+.+. |+++..|.||.|--+-..... .............. ..+| ++ +...+|+|.+
T Consensus 157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR--~g~pediA~~ 234 (274)
T d1xhla_ 157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH--CGKPEEIANI 234 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS--CBCHHHHHHH
T ss_pred eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCC--CcCHHHHHHH
Confidence 39999999999998877653 899999999999654211100 01112222222222 2334 32 5579999999
Q ss_pred HHHhhcC---CCCCc-eEEEecC
Q 027969 131 HIRALEV---PKASG-RYLLAGS 149 (216)
Q Consensus 131 ~~~~~~~---~~~~~-~~~~~~~ 149 (216)
+.+++.. ....| ...+.|+
T Consensus 235 v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 235 IVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHcCCccccCccCcEEEeCcC
Confidence 9999852 23455 4555543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.76 E-value=0.11 Score=36.42 Aligned_cols=120 Identities=16% Similarity=0.097 Sum_probs=66.8
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cC
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NG 78 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~ 78 (216)
+.++...++. + .++|++||.++..+... ...|+.||...+.+.+..+.+ ++
T Consensus 120 ~~~~~~m~~~-~-G~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~~~~g~~ 175 (253)
T d1hxha_ 120 QQGIAAMKET-G-GSIINMASVSSWLPIEQ----------------------YAGYSASKAAVSALTRAAALSCRKQGYA 175 (253)
T ss_dssp HHHHHHHTTT-C-EEEEEECCGGGTSCCTT----------------------BHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhc-C-CceecccchhhhcCccc----------------------cccccchhHHHHHHHHHHHHHHhhcCCC
Confidence 3444444444 4 68999999844332211 134999999999988877653 25
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
+++..|-|+.|-.+-....... ................-.+...+|+|+++.+++... ...| ...+.|+
T Consensus 176 IrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 176 IRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp EEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred EEEEEEeECCCcCHhHHhhCcc--hhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 8899999998854321000000 000111111100001123778899999999998642 2344 4455444
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=95.73 E-value=0.036 Score=38.80 Aligned_cols=85 Identities=16% Similarity=0.132 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.+|...|.+.+.++++. |+++.++.||.|-.+... ...........+.. | ..-+...+|+|+++..+
T Consensus 147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~---~~~~~~~~~~~~~~---p-~~r~~~p~dva~~v~fL 219 (241)
T d2a4ka1 147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA---GLPPWAWEQEVGAS---P-LGRAGRPEEVAQAALFL 219 (241)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT---TSCHHHHHHHHHTS---T-TCSCBCHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH---hhhHhHHHHHHhCC---C-CCCCcCHHHHHHHHHHH
Confidence 49999999999999998765 699999999999443321 12233344443331 1 12256799999999999
Q ss_pred hcCC--CCCc-eEEEecC
Q 027969 135 LEVP--KASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~~ 149 (216)
+... ...| ...+.|+
T Consensus 220 ~S~~s~~itG~~i~vDGG 237 (241)
T d2a4ka1 220 LSEESAYITGQALYVDGG 237 (241)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hcchhCCCcCceEEeCCC
Confidence 9643 3445 4445443
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.088 Score=36.99 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=60.0
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHH--HH---HHcCCcEEEEcCCCccC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK--FA---KENGIDLVAIHPGTVIG 91 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~--~~---~~~~~~~~ilR~~~v~G 91 (216)
.++|++||.++..+... ...|+.||...+.+.+. .+ ..+|+++..|.|+.|--
T Consensus 129 g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T 186 (254)
T d2gdza1 129 GIIINMSSLAGLMPVAQ----------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 186 (254)
T ss_dssp EEEEEECCGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred cEEEeeccHhhccCCCC----------------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCC
Confidence 46999999844433211 13499999999988764 22 23489999999999843
Q ss_pred CCCCCC--------CCccHHHH-HHHHcCCCCCCCCCceeehhhhHHHHHHhhcCCCCCc-eEEEe
Q 027969 92 PFFQPI--------LNFGAEVI-LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLA 147 (216)
Q Consensus 92 ~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~ 147 (216)
+-.... .......+ ..... .-+...+|+|+++..++..+...| ...+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedvA~~v~fL~s~~~itG~~i~Vd 244 (254)
T d2gdza1 187 AILESIEKEENMGQYIEYKDHIKDMIKY--------YGILDPPLIANGLITLIEDDALNGAIMKIT 244 (254)
T ss_dssp HHHHGGGCHHHHGGGGGGHHHHHHHHHH--------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEE
T ss_pred hhhhhccccccccccHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHHcCCCCCCCEEEEC
Confidence 211000 00000011 11111 125668999999999998765566 44444
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=95.23 E-value=0.2 Score=35.16 Aligned_cols=85 Identities=19% Similarity=0.250 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+ +|+++..|.|+.|--+.... ............ .| ..-+...+|+|.++.++
T Consensus 166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~---~p-l~R~g~pedvA~~v~fL 238 (260)
T d1h5qa_ 166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASN---IP-LNRFAQPEEMTGQAILL 238 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHT---CT-TSSCBCGGGGHHHHHHH
T ss_pred chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHH
Confidence 4999999999999888764 38999999999995543221 122333333332 22 11266799999999999
Q ss_pred hcCC--CCCc-eEEEecC
Q 027969 135 LEVP--KASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~~ 149 (216)
+... ...| ...+.|+
T Consensus 239 ~S~~s~~itG~~i~VDGG 256 (260)
T d1h5qa_ 239 LSDHATYMTGGEYFIDGG 256 (260)
T ss_dssp HSGGGTTCCSCEEEECTT
T ss_pred hcchhCCCcCceEEECCC
Confidence 8543 2345 4455443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.18 E-value=0.025 Score=39.97 Aligned_cols=96 Identities=18% Similarity=0.096 Sum_probs=58.1
Q ss_pred ccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCccCCCC
Q 027969 16 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFF 94 (216)
Q Consensus 16 ~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~ 94 (216)
-.++|++||.++..+... . ..|+.||...+.+.+.++.+. |+++..+.||.|-.+-.
T Consensus 148 ~g~Iv~isS~~~~~~~~~--------------~--------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~ 205 (259)
T d1oaaa_ 148 SKTVVNISSLCALQPYKG--------------W--------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ 205 (259)
T ss_dssp EEEEEEECCGGGTSCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred cccccccccccccCCCcc--------------c--------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHH
Confidence 358999999844332211 1 349999999999999987654 89999999999865321
Q ss_pred CCC--CCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 95 QPI--LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 95 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
... ..........+.... ....+...+|+|++++.++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~----~~~r~~~p~evA~~i~~ll~~ 246 (259)
T d1oaaa_ 206 QLARETSKDPELRSKLQKLK----SDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHCSCHHHHHHHHHHH----HTTCSBCHHHHHHHHHHHHHH
T ss_pred HHhhhcCCCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhhh
Confidence 000 000011111110000 111256789999999988864
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.00 E-value=0.018 Score=41.86 Aligned_cols=94 Identities=17% Similarity=-0.019 Sum_probs=61.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCc
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GID 80 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 80 (216)
+.++..+++. +-.++|++||.++.++... . ..|+.||...+.+.+.++.+. |++
T Consensus 130 ~~~~p~m~~~-~~G~IV~isS~~~~~~~~~--------------~--------~~Y~asKaal~~lt~~la~E~~~~gIr 186 (302)
T d1gz6a_ 130 RAAWDHMKKQ-NYGRIIMTASASGIYGNFG--------------Q--------ANYSAAKLGLLGLANTLVIEGRKNNIH 186 (302)
T ss_dssp HHHHHHHHHH-TCEEEEEECCHHHHHCCTT--------------C--------HHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred HHhHHHHHhC-CCcEEEEeCChhhcCCCCC--------------c--------HHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 3444455555 4468999999856654321 1 349999999999999987753 899
Q ss_pred EEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 81 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 81 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
+..|.|+.+--.-.. .... ....++..+|+|.++.+++..
T Consensus 187 VN~I~PG~~~t~~~~----~~~~-------------~~~~~~~PedvA~~v~fL~S~ 226 (302)
T d1gz6a_ 187 CNTIAPNAGSRMTET----VMPE-------------DLVEALKPEYVAPLVLWLCHE 226 (302)
T ss_dssp EEEEEEECCSTTTGG----GSCH-------------HHHHHSCGGGTHHHHHHHTST
T ss_pred eeeeCCCCCCcchhh----cCcH-------------hhHhcCCHHHHHHHHHHHcCC
Confidence 999999876221110 1111 111233479999999998853
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.93 E-value=0.014 Score=41.05 Aligned_cols=95 Identities=16% Similarity=0.063 Sum_probs=60.1
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH------c
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE------N 77 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~ 77 (216)
+.++....+. +-.++|++||.++..+.. ....|+.||...+.+.+.++.+ .
T Consensus 124 ~~~lp~m~~~-~~G~Iv~isS~~~~~~~~----------------------~~~~Y~asKaal~~~~~~La~El~~~~~~ 180 (244)
T d1yb1a_ 124 KAFLPAMTKN-NHGHIVTVASAAGHVSVP----------------------FLLAYCSSKFAAVGFHKTLTDELAALQIT 180 (244)
T ss_dssp HHHHHHHHHT-TCEEEEEECCCC-CCCHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHhhhHHhc-CCceEEEeecchhcCCCC----------------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3445555555 446899999983332211 0134999999999998888764 3
Q ss_pred CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 78 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 78 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
|+.+..+.||.|--+-... . .. .....+..+|+|+.+..++..+
T Consensus 181 gI~V~~i~PG~v~T~~~~~----~---~~----------~~~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 181 GVKTTCLCPNFVNTGFIKN----P---ST----------SLGPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp TEEEEEEEETHHHHCSTTC----T---HH----------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEEEcCCCCChhhhC----c---Cc----------cccCCCCHHHHHHHHHHHHhcC
Confidence 7999999999873322110 0 00 1112345789999998887654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.89 E-value=0.11 Score=36.87 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCC--ccHHHHHHHHcCC-CCCC-CCCceeehhhhHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QSFA-FPYIFVEIRDVVYA 130 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~-~~~~-~~~~~i~v~D~a~~ 130 (216)
.|+.||...+.+.+.++.+ +|+++..|.|+.|--+-...... ............. ..+| + -+...+|+|++
T Consensus 160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--R~g~pediA~~ 237 (272)
T d1xkqa_ 160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG--AAGKPEHIANI 237 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS--SCBCHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC--CCcCHHHHHHH
Confidence 4999999999999888765 38999999999985432111000 0111111121111 2333 3 26678999999
Q ss_pred HHHhhcC---CCCCc-eEEEec
Q 027969 131 HIRALEV---PKASG-RYLLAG 148 (216)
Q Consensus 131 ~~~~~~~---~~~~~-~~~~~~ 148 (216)
+.+++.. ....| .+.+.|
T Consensus 238 v~fL~S~~as~~iTG~~i~vDG 259 (272)
T d1xkqa_ 238 ILFLADRNLSFYILGQSIVADG 259 (272)
T ss_dssp HHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHhCcchhCCccCeEEEeCc
Confidence 9999853 22445 444443
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=94.88 E-value=0.043 Score=39.22 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCccCCCCCCCCCc------cHHHHHHHHcCCCCCCCCCceeehhhhHH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNF------GAEVILNLINGDQSFAFPYIFVEIRDVVY 129 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 129 (216)
.|+.||...+.+.+..+.+. ++++..|.|+.|--+-..+.... ...-+...... .+| ..-+...+|+|.
T Consensus 154 ~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P-lgR~g~peeva~ 230 (276)
T d1bdba_ 154 LYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKS--VLP-IGRMPEVEEYTG 230 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTT--TCT-TSSCCCGGGGSH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHh--cCC-CCCCcCHHHHHH
Confidence 49999999999998887754 58999999999854422111000 00011111111 122 112566899999
Q ss_pred HHHHhhcC---CCCCc-eEEEec
Q 027969 130 AHIRALEV---PKASG-RYLLAG 148 (216)
Q Consensus 130 ~~~~~~~~---~~~~~-~~~~~~ 148 (216)
++.+++.. ....| ...+.|
T Consensus 231 ~v~fL~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 231 AYVFFATRGDAAPATGALLNYDG 253 (276)
T ss_dssp HHHHHHCHHHHTTCSSCEEEESS
T ss_pred HHHHHcCCcccCCeeCcEEEECc
Confidence 99988742 23445 445544
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.76 E-value=0.04 Score=38.88 Aligned_cols=85 Identities=22% Similarity=0.222 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHc--CC----------CCCCCCCce
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN--GD----------QSFAFPYIF 121 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~ 121 (216)
..|+.||...+.+.+.++.+. |+++..|.|+.|-.+- ...+...... +. ...| ..-+
T Consensus 149 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-l~R~ 220 (255)
T d1gega_ 149 AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-------WAEIDRQVSEAAGKPLGYGTAEFAKRIT-LGRL 220 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-------HHHHHHHHHHHHTCCTTHHHHHHHTTCT-TCSC
T ss_pred ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-------HhhhhhhhHhhhcccchhHHHHHHhcCC-CCCC
Confidence 349999999999998887643 8999999999984321 1111111110 10 0111 1126
Q ss_pred eehhhhHHHHHHhhcCC--CCCc-eEEEecC
Q 027969 122 VEIRDVVYAHIRALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 122 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 149 (216)
...+|+|.++.+++... ...| ...+.|+
T Consensus 221 ~~peevA~~v~fL~S~~a~~itG~~i~vDGG 251 (255)
T d1gega_ 221 SEPEDVAACVSYLASPDSDYMTGQSLLIDGG 251 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred cCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence 77999999999998542 2344 4445443
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.75 E-value=0.059 Score=38.23 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=58.9
Q ss_pred HHHHHHHhccCCccEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cC
Q 027969 4 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NG 78 (216)
Q Consensus 4 ~~ll~~~~~~~~~~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~ 78 (216)
+.++...++. + .++|++||.++..+.+. ...|+.||...+.+.+.++.+ .+
T Consensus 132 ~~~lp~m~~~-~-G~ii~isS~~~~~~~p~----------------------~~~Y~asKaal~~~~~~La~El~~~~~~ 187 (269)
T d1xu9a_ 132 VAALPMLKQS-N-GSIVVVSSLAGKVAYPM----------------------VAAYSASKFALDGFFSSIRKEYSVSRVN 187 (269)
T ss_dssp HHHHHHHHHH-T-CEEEEEEEGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhc-C-CcceEeccchhcCCCCC----------------------chHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 3444444443 3 47899999744433211 134999999999988887754 25
Q ss_pred CcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcCC
Q 027969 79 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 138 (216)
Q Consensus 79 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 138 (216)
+++..+.||.|-- .+......+. ........+++|+.++......
T Consensus 188 I~V~~v~PG~v~T-----------~~~~~~~~~~----~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 188 VSITLCVLGLIDT-----------ETAMKAVSGI----VHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp CEEEEEEECCBCC-----------HHHHHHSCGG----GGGGCBCHHHHHHHHHHHHHTT
T ss_pred EEEEEEecCcCCC-----------cHHHHhccCC----ccccCCCHHHHHHHHHHHhhcC
Confidence 8888999998822 2233332221 1222445788888888776543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=94.48 E-value=0.34 Score=33.99 Aligned_cols=88 Identities=18% Similarity=0.013 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
..|+.+|...+.+.+..+.+. |+++.++.|+.+.-+...... ............. ...-+...+|+|.++..
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedIA~~v~f 229 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINA----PLRKNVSLEEVGNAGMY 229 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHS----TTSSCCCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC-chHHHHHHHhhhh----hccCCcCHHHHHHHHHH
Confidence 349999999999998877643 799999999998765432211 1111111111111 12236779999999999
Q ss_pred hhcCC--CCCc-eEEEecC
Q 027969 134 ALEVP--KASG-RYLLAGS 149 (216)
Q Consensus 134 ~~~~~--~~~~-~~~~~~~ 149 (216)
++... ...| .+.+.|+
T Consensus 230 L~S~~s~~itG~~i~vDGG 248 (274)
T d2pd4a1 230 LLSSLSSGVSGEVHFVDAG 248 (274)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhChhhCCCcCceEEECCC
Confidence 99643 2344 4555543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=93.91 E-value=0.056 Score=37.50 Aligned_cols=84 Identities=13% Similarity=0.052 Sum_probs=55.2
Q ss_pred cEEEEcccccccccCCCCCCCCccccCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCccC
Q 027969 17 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIG 91 (216)
Q Consensus 17 ~~~i~~Ss~~~vy~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G 91 (216)
.++|++||.++..+.+. ...|+.||...+.+.+.++.+. ++++..+.|+.+--
T Consensus 122 g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T 179 (235)
T d1ooea_ 122 GLLQLTGAAAAMGPTPS----------------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT 179 (235)
T ss_dssp EEEEEECCGGGGSCCTT----------------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred eEEEEeccHHhcCCccc----------------------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC
Confidence 57999999844442211 1349999999999999987552 66788899988732
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHhhcC
Q 027969 92 PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 137 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 137 (216)
.+........ ....++..+|+++.++..+..
T Consensus 180 -----------~~~~~~~~~~----~~~~~~~~~~va~~~~~~l~~ 210 (235)
T d1ooea_ 180 -----------PMNRKWMPNA----DHSSWTPLSFISEHLLKWTTE 210 (235)
T ss_dssp -----------HHHHHHSTTC----CGGGCBCHHHHHHHHHHHHHC
T ss_pred -----------cchhhhCcCC----ccccCCCHHHHHHHHHHHhcC
Confidence 1223322221 223477899999998765543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.69 E-value=0.048 Score=37.90 Aligned_cols=65 Identities=15% Similarity=0.099 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 132 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 132 (216)
.|+.||...+.+.+.++.+ .|+++..+.|+.|.-+ +........ ..-.++..+|+++.+.
T Consensus 141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-----------~~~~~~~~~----~~~~~~~pe~va~~~~ 205 (236)
T d1dhra_ 141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----------MNRKSMPEA----DFSSWTPLEFLVETFH 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----------HHHHHSTTS----CGGGSEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-----------cchhhCccc----hhhcCCCHHHHHHHHH
Confidence 4999999999999998754 3799999999998432 122221111 1223778999999999
Q ss_pred HhhcC
Q 027969 133 RALEV 137 (216)
Q Consensus 133 ~~~~~ 137 (216)
.++..
T Consensus 206 ~l~s~ 210 (236)
T d1dhra_ 206 DWITG 210 (236)
T ss_dssp HHHTT
T ss_pred HHhCC
Confidence 98864
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.59 E-value=0.3 Score=34.14 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCccCCCCCCCCCccH-HHHHHHHcCCCCCCCCCceeehhhhHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGA-EVILNLINGDQSFAFPYIFVEIRDVVYAH 131 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 131 (216)
.|+.+|...+.+.+.++.+ +++++.++.|+.+=.+.......... ...... ....++..+|+|+++
T Consensus 164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~--------~~~r~~~pedvA~~v 235 (257)
T d1xg5a_ 164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY--------EQMKCLKPEDVAEAV 235 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH--------C---CBCHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC--------CCCCCcCHHHHHHHH
Confidence 4999999999999887743 47899999998774321100000011 111111 223367899999999
Q ss_pred HHhhcCC
Q 027969 132 IRALEVP 138 (216)
Q Consensus 132 ~~~~~~~ 138 (216)
..++..+
T Consensus 236 ~fL~s~~ 242 (257)
T d1xg5a_ 236 IYVLSTP 242 (257)
T ss_dssp HHHHHSC
T ss_pred HHHhCCh
Confidence 9998764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=93.10 E-value=0.14 Score=36.08 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCC------CccHHHHHHHHcCCCCCCCCCceeehhhhH
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGDQSFAFPYIFVEIRDVV 128 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 128 (216)
.|+.||...+.+.+.++.+. |+++..|.||.|--+-..... .........+.+. .| ..-+...+|+|
T Consensus 160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~P-l~R~g~pedvA 235 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC---VP-AGVMGQPQDIA 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH---CT-TSSCBCHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc---CC-CCCCcCHHHHH
Confidence 39999999999998887653 899999999998544321100 0011111111111 12 11256789999
Q ss_pred HHHHHhhcC---CCCCc-eEEEec
Q 027969 129 YAHIRALEV---PKASG-RYLLAG 148 (216)
Q Consensus 129 ~~~~~~~~~---~~~~~-~~~~~~ 148 (216)
.++.+++.. ....| .+.+.|
T Consensus 236 ~~v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 236 EVIAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp HHHHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHHHhCCcccCCccCceEEeCC
Confidence 999998853 22445 444443
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=92.55 E-value=0.26 Score=34.75 Aligned_cols=88 Identities=16% Similarity=0.057 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCC--------CCCCCCccHHHH-HH-HHcCCCCCCCCCceeeh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF--------FQPILNFGAEVI-LN-LINGDQSFAFPYIFVEI 124 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~--------~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~v 124 (216)
.|+.+|...+.+.+.++.+ +|+++..|.||.|-.+- ............ .. ..+. .| ..-+...
T Consensus 166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P-lgR~~~p 241 (272)
T d1g0oa_ 166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW---SP-LRRVGLP 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS---CT-TCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHcc---CC-CCCCcCH
Confidence 4999999999999888765 48999999999995321 000000111111 11 1111 11 1137788
Q ss_pred hhhHHHHHHhhcCCC--CCce-EEEecC
Q 027969 125 RDVVYAHIRALEVPK--ASGR-YLLAGS 149 (216)
Q Consensus 125 ~D~a~~~~~~~~~~~--~~~~-~~~~~~ 149 (216)
+|+|.++..++.... ..|. ..+.|+
T Consensus 242 eevA~~v~fL~s~~s~~itG~~i~vDGG 269 (272)
T d1g0oa_ 242 IDIARVVCFLASNDGGWVTGKVIGIDGG 269 (272)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCceEeECCC
Confidence 999999999996432 3453 444443
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=91.76 E-value=1.4 Score=30.92 Aligned_cols=87 Identities=17% Similarity=0.081 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHH----HcCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 58 WYSLAKTLAEEAAWKFAK----ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~----~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
.|+.+|...+.+.+..+. .+|+++..|.|+.+..+..... .....+.....+.. | ..-+...+|+|.++.+
T Consensus 191 ~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~---P-lgR~~~peevA~~v~f 265 (297)
T d1d7oa_ 191 GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNA---P-IQKTLTADEVGNAAAF 265 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHS---S-SCCCBCHHHHHHHHHH
T ss_pred ceecccccccccccccchhccccceEEecccccccccchhhhhc-cCCHHHHHHHHhCC---C-CCCCCCHHHHHHHHHH
Confidence 399999888877766543 3489999999999976654321 12223333333221 2 1125679999999999
Q ss_pred hhcC--CCCCc-eEEEecC
Q 027969 134 ALEV--PKASG-RYLLAGS 149 (216)
Q Consensus 134 ~~~~--~~~~~-~~~~~~~ 149 (216)
++.. ....| ...+.|+
T Consensus 266 L~S~~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 266 LVSPLASAITGATIYVDNG 284 (297)
T ss_dssp HTSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCCcCceEEECcC
Confidence 9954 33345 3444443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=91.14 E-value=0.38 Score=33.28 Aligned_cols=88 Identities=18% Similarity=0.115 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++.+ +|+++-.|.|+.|-.+...... ..........+. ..| ..-+...+|+|.++.++
T Consensus 154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~--~~P-lgR~g~p~eva~~v~fL 229 (257)
T d1fjha_ 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL-QDPRYGESIAKF--VPP-MGRRAEPSEMASVIAFL 229 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------C--CCS-TTSCCCTHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc-CCHHHHHHHHhc--CCC-CCCCcCHHHHHHHHHHH
Confidence 4999999999999888754 3899999999999654322110 000111111111 112 11256789999999999
Q ss_pred hcCC--CCCc-eEEEecC
Q 027969 135 LEVP--KASG-RYLLAGS 149 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~~ 149 (216)
+... ...| ...+.|+
T Consensus 230 ~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 230 MSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCchhCCccCceEEeCCC
Confidence 8543 3445 3444444
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=90.71 E-value=0.44 Score=32.99 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCcc
Q 027969 58 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI 90 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 90 (216)
.|+.||.....+.+.++.+ .|+.+..+.||.|-
T Consensus 169 ~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 169 AYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 4999999999988887654 38999999999984
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| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.50 E-value=0.22 Score=35.17 Aligned_cols=34 Identities=26% Similarity=0.203 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHHHHHHHHH-------cCCcEEEEcCCCcc
Q 027969 57 EWYSLAKTLAEEAAWKFAKE-------NGIDLVAIHPGTVI 90 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~ 90 (216)
..|+.||.....+.+.++++ .++.+..+.||.|-
T Consensus 190 ~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 190 SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 34999999988776655433 27999999999984
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| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.20 E-value=1.3 Score=30.49 Aligned_cols=84 Identities=17% Similarity=0.076 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHH
Q 027969 57 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 133 (216)
Q Consensus 57 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 133 (216)
..|+.||...+.+.+.++++ +|+++..|.||.+.-+... .......+.+. .|-..-+...+|+|.++.+
T Consensus 170 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~---~pl~r~~~~peeva~~v~f 241 (266)
T d1mxha_ 170 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRK---VPLGQSEASAAQIADAIAF 241 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTT---CTTTSCCBCHHHHHHHHHH
T ss_pred hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhc---CCCCCCCCCHHHHHHHHHH
Confidence 35999999999999888765 3899999999998644322 22333333332 1201124579999999999
Q ss_pred hhcCC--CCCc-eEEEec
Q 027969 134 ALEVP--KASG-RYLLAG 148 (216)
Q Consensus 134 ~~~~~--~~~~-~~~~~~ 148 (216)
++... ...| .+.+.|
T Consensus 242 L~s~~s~~itG~~i~vDG 259 (266)
T d1mxha_ 242 LVSKDAGYITGTTLKVDG 259 (266)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhCCccCCeEEECc
Confidence 99653 2355 455544
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| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=89.78 E-value=2.2 Score=29.65 Aligned_cols=83 Identities=17% Similarity=0.023 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||...+.+.+.++++. |+++-.|.||.+--... .............+.. .-+...+|+|.++.++
T Consensus 189 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----~~~~~~~~~~~~~pl~---~R~~~peeiA~~v~fL 260 (284)
T d1e7wa_ 189 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----MPPAVWEGHRSKVPLY---QRDSSAAEVSDVVIFL 260 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----SCHHHHHHHHTTCTTT---TSCBCHHHHHHHHHHH
T ss_pred eeccccccchhhhHHHHHHhCCcccccccccccccccccc-----CCHHHHHHHHhcCCCC---CCCCCHHHHHHHHHHH
Confidence 49999999999999988653 89999999986422211 2234444444332211 1255799999999999
Q ss_pred hcCC--CCCc-eEEEec
Q 027969 135 LEVP--KASG-RYLLAG 148 (216)
Q Consensus 135 ~~~~--~~~~-~~~~~~ 148 (216)
+... ...| .+.+.|
T Consensus 261 ~S~~s~~itG~~i~VDG 277 (284)
T d1e7wa_ 261 CSSKAKYITGTCVKVDG 277 (284)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhcCccCCeEEECc
Confidence 8643 2345 444543
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| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=89.16 E-value=0.56 Score=33.99 Aligned_cols=33 Identities=24% Similarity=0.180 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCcc
Q 027969 58 WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVI 90 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 90 (216)
.|+.+|...|.+.+.++.+ +|+++-.|.||.|-
T Consensus 185 ~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 185 GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 3999999999988887643 48999999999873
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| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=84.70 E-value=2 Score=29.46 Aligned_cols=66 Identities=17% Similarity=0.228 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCccCCCCCCCCCccHHHHHHHHcCCCCCCCCCceeehhhhHHHHHHh
Q 027969 58 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 134 (216)
Q Consensus 58 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 134 (216)
.|+.||.....+.+.++++. |+.+..+.||.|--+- . + ....+..++.++.++..
T Consensus 171 aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m-----------~-----~------~~~~~~~e~~a~~~~~~ 228 (250)
T d1yo6a1 171 AYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL-----------G-----G------KNAALTVEQSTAELISS 228 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC-----------C-----C------CCCCCCHHHHHHHHHHH
Confidence 49999999999998887653 8999999999883110 0 0 01123467888888888
Q ss_pred hcCCC--CCceEE
Q 027969 135 LEVPK--ASGRYL 145 (216)
Q Consensus 135 ~~~~~--~~~~~~ 145 (216)
+.... ..|.|+
T Consensus 229 ~~~~~~~~sG~f~ 241 (250)
T d1yo6a1 229 FNKLDNSHNGRFF 241 (250)
T ss_dssp HTTCCGGGTTCEE
T ss_pred HhcCCCCCCeEEE
Confidence 76532 235554
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