Query 027972
Match_columns 216
No_of_seqs 234 out of 1769
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 06:20:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 99.9 1.3E-26 4.5E-31 192.7 13.8 150 62-216 4-186 (190)
2 1g2q_A Adenine phosphoribosylt 99.9 5.3E-26 1.8E-30 188.6 16.1 140 76-216 5-179 (187)
3 1zn8_A APRT, adenine phosphori 99.9 5.2E-26 1.8E-30 186.9 12.9 142 75-216 3-178 (180)
4 1qb7_A APRT, adenine phosphori 99.9 4.4E-26 1.5E-30 196.7 12.4 141 75-215 16-203 (236)
5 1l1q_A Adenine phosphoribosylt 99.9 9.9E-25 3.4E-29 181.0 13.0 141 75-215 2-176 (186)
6 3m3h_A OPRT, oprtase, orotate 99.8 5.9E-19 2E-23 152.9 13.0 131 84-216 38-197 (234)
7 3dez_A OPRT, oprtase, orotate 99.8 6.1E-19 2.1E-23 153.6 11.1 131 84-216 50-209 (243)
8 2p1z_A Phosphoribosyltransfera 99.8 2.1E-18 7.1E-23 142.6 12.2 136 78-216 11-173 (180)
9 3qw4_B UMP synthase; N-termina 99.8 2.2E-18 7.5E-23 161.7 12.8 127 87-216 273-424 (453)
10 2wns_A Orotate phosphoribosylt 99.7 2E-17 7E-22 139.3 10.8 124 89-215 19-169 (205)
11 2yzk_A OPRT, oprtase, orotate 99.7 3.1E-17 1E-21 135.2 11.2 123 90-216 16-165 (178)
12 1vch_A Phosphoribosyltransfera 99.7 8.8E-18 3E-22 136.7 7.8 126 81-215 8-170 (175)
13 3mjd_A Orotate phosphoribosylt 99.7 4.5E-17 1.5E-21 141.0 11.9 124 88-215 38-202 (232)
14 1y0b_A Xanthine phosphoribosyl 99.7 9.4E-17 3.2E-21 133.3 11.5 121 95-215 21-179 (197)
15 1o57_A PUR operon repressor; p 99.7 1.2E-16 4E-21 142.1 11.4 135 76-215 82-250 (291)
16 3n2l_A OPRT, oprtase, orotate 99.7 1.5E-16 5.2E-21 138.3 11.7 123 88-215 45-207 (238)
17 1lh0_A OMP synthase; loop clos 99.7 1.8E-16 6E-21 134.4 10.8 123 89-216 21-183 (213)
18 2ps1_A Orotate phosphoribosylt 99.7 8.5E-16 2.9E-20 131.2 13.4 124 89-216 25-195 (226)
19 2aee_A OPRT, oprtase, orotate 99.6 9.3E-16 3.2E-20 129.2 11.5 117 97-215 37-176 (211)
20 3hvu_A Hypoxanthine phosphorib 99.6 1.5E-15 5.1E-20 129.0 10.4 112 88-199 17-157 (204)
21 1fsg_A HGPRTASE, hypoxanthine- 99.5 5.8E-14 2E-18 120.6 9.1 112 88-199 32-183 (233)
22 1z7g_A HGPRT, HGPRTASE, hypoxa 99.5 4.7E-14 1.6E-18 119.9 7.7 112 88-199 18-167 (217)
23 1hgx_A HGXPRTASE, hypoxanthine 99.5 1.9E-13 6.7E-18 112.3 9.8 103 97-199 6-136 (183)
24 2jbh_A Phosphoribosyltransfera 99.4 4.5E-13 1.6E-17 114.3 8.8 111 89-199 27-175 (225)
25 1vdm_A Purine phosphoribosyltr 99.4 2.7E-12 9.2E-17 101.9 10.3 96 104-199 4-124 (153)
26 3ozf_A Hypoxanthine-guanine-xa 99.3 2E-12 7E-17 113.0 9.1 110 90-199 48-197 (250)
27 3o7m_A Hypoxanthine phosphorib 99.3 9.6E-12 3.3E-16 103.8 9.9 103 97-199 4-135 (186)
28 2geb_A Hypoxanthine-guanine ph 99.2 3.1E-11 1.1E-15 99.6 10.1 100 100-199 11-139 (185)
29 3lrt_A Ribose-phosphate pyroph 99.2 6.8E-11 2.3E-15 105.0 11.0 97 115-214 142-258 (286)
30 1a3c_A PYRR, pyrimidine operon 99.2 5.7E-11 1.9E-15 96.9 9.4 99 100-198 2-139 (181)
31 1yfz_A Hypoxanthine-guanine ph 99.2 6.7E-11 2.3E-15 99.0 9.8 100 100-199 31-159 (205)
32 1pzm_A HGPRT, hypoxanthine-gua 99.1 9.6E-11 3.3E-15 99.0 8.4 102 98-199 20-159 (211)
33 2ywu_A Hypoxanthine-guanine ph 99.1 2.8E-10 9.5E-15 94.4 10.2 96 104-199 12-136 (181)
34 1nul_A XPRT, xanthine-guanine 99.1 2.4E-10 8.3E-15 91.7 8.0 90 104-199 5-117 (152)
35 1tc1_A Protein (hypoxanthine p 99.1 7E-10 2.4E-14 94.6 10.0 100 100-199 6-144 (220)
36 3ohp_A Hypoxanthine phosphorib 99.0 1.2E-09 4.2E-14 90.2 10.9 96 104-199 7-132 (177)
37 1ufr_A TT1027, PYR mRNA-bindin 99.0 9.9E-10 3.4E-14 89.8 9.2 43 156-198 94-137 (181)
38 1u9y_A RPPK;, ribose-phosphate 99.0 4.2E-10 1.4E-14 99.4 6.7 60 155-214 202-261 (284)
39 2xbu_A Hypoxanthine-guanine ph 99.0 5.6E-09 1.9E-13 89.0 12.8 45 155-199 100-161 (221)
40 3s5j_B Ribose-phosphate pyroph 98.9 2.3E-09 8E-14 96.9 9.4 56 156-211 211-266 (326)
41 3dah_A Ribose-phosphate pyroph 98.8 5.9E-09 2E-13 93.9 7.8 57 156-212 214-270 (319)
42 2ji4_A Phosphoribosyl pyrophos 98.8 1.1E-08 3.6E-13 94.0 8.5 53 156-208 270-322 (379)
43 1w30_A PYRR bifunctional prote 98.8 6E-09 2E-13 87.4 6.2 43 156-198 110-153 (201)
44 1dku_A Protein (phosphoribosyl 98.7 5.9E-09 2E-13 93.5 4.8 57 156-212 215-271 (317)
45 1wd5_A Hypothetical protein TT 98.7 6.9E-09 2.4E-13 86.8 4.5 49 156-206 118-166 (208)
46 3acd_A Hypoxanthine-guanine ph 98.6 1.5E-07 5.3E-12 78.1 10.4 44 156-199 93-136 (181)
47 1ecf_A Glutamine phosphoribosy 98.5 2.5E-07 8.4E-12 87.3 7.8 40 156-195 357-396 (504)
48 1i5e_A Uracil phosphoribosyltr 98.4 1.1E-07 3.8E-12 80.4 3.1 50 156-207 122-171 (209)
49 2e55_A Uracil phosphoribosyltr 98.3 3.8E-07 1.3E-11 77.5 4.1 50 156-207 119-168 (208)
50 2ehj_A Uracil phosphoribosyltr 98.3 5.6E-07 1.9E-11 76.5 4.3 50 156-207 121-170 (208)
51 1ao0_A Glutamine phosphoribosy 98.3 8.1E-07 2.8E-11 82.7 5.6 39 156-194 336-374 (459)
52 1o5o_A Uracil phosphoribosyltr 98.2 1.5E-06 5.3E-11 74.5 6.6 50 156-207 134-183 (221)
53 1v9s_A Uracil phosphoribosyltr 98.2 1.5E-06 5.2E-11 73.8 6.5 50 156-207 121-170 (208)
54 1bd3_D Uprtase, uracil phospho 98.1 1.3E-06 4.5E-11 75.9 2.9 50 156-207 154-205 (243)
55 3dmp_A Uracil phosphoribosyltr 97.9 2.6E-06 8.8E-11 72.9 2.2 50 156-207 127-178 (217)
56 1dqn_A Guanine phosphoribosylt 97.9 4.6E-06 1.6E-10 71.7 3.3 39 156-199 116-154 (230)
57 1xtt_A Probable uracil phospho 97.8 7.9E-06 2.7E-10 69.8 2.5 49 156-207 129-180 (216)
58 3to5_A CHEY homolog; alpha(5)b 51.4 16 0.00054 27.7 4.1 31 156-189 10-40 (134)
59 1r6j_A Syntenin 1; PDZ, membra 43.9 31 0.0011 24.2 4.3 35 155-189 41-75 (82)
60 3eod_A Protein HNR; response r 42.3 45 0.0015 23.1 5.1 30 157-189 6-35 (130)
61 3f6p_A Transcriptional regulat 42.2 44 0.0015 23.1 5.0 28 158-188 2-29 (120)
62 3gl9_A Response regulator; bet 40.9 46 0.0016 23.1 5.0 28 159-189 3-30 (122)
63 3h5i_A Response regulator/sens 37.9 50 0.0017 23.4 4.8 29 157-188 4-32 (140)
64 3two_A Mannitol dehydrogenase; 36.6 52 0.0018 28.0 5.5 33 154-190 173-205 (348)
65 3uog_A Alcohol dehydrogenase; 36.4 57 0.002 28.1 5.8 34 154-191 186-219 (363)
66 3lte_A Response regulator; str 35.4 60 0.0021 22.4 4.8 29 157-188 5-33 (132)
67 1tmy_A CHEY protein, TMY; chem 35.3 73 0.0025 21.5 5.2 28 158-188 2-29 (120)
68 1uuf_A YAHK, zinc-type alcohol 34.6 62 0.0021 28.1 5.7 33 154-190 191-223 (369)
69 3s2e_A Zinc-containing alcohol 33.1 56 0.0019 27.6 5.1 34 154-191 163-196 (340)
70 1wi4_A Synip, syntaxin binding 31.9 47 0.0016 23.8 3.8 39 154-192 59-100 (109)
71 1e3j_A NADP(H)-dependent ketos 31.6 77 0.0026 27.0 5.7 33 154-190 165-197 (352)
72 1yqd_A Sinapyl alcohol dehydro 30.6 80 0.0027 27.2 5.7 32 155-190 184-216 (366)
73 1iz0_A Quinone oxidoreductase; 30.5 63 0.0021 26.8 4.9 33 155-190 123-155 (302)
74 2cf5_A Atccad5, CAD, cinnamyl 30.3 74 0.0025 27.3 5.4 33 154-190 176-209 (357)
75 1zsy_A Mitochondrial 2-enoyl t 30.2 70 0.0024 27.3 5.3 36 154-192 164-199 (357)
76 1i16_A Interleukin 16, LCF; cy 29.8 48 0.0016 24.5 3.6 38 154-191 75-112 (130)
77 3hzh_A Chemotaxis response reg 29.8 82 0.0028 22.8 5.0 29 158-189 36-64 (157)
78 1pl8_A Human sorbitol dehydrog 29.7 85 0.0029 26.8 5.7 34 154-191 168-202 (356)
79 3gge_A PDZ domain-containing p 29.7 72 0.0025 23.2 4.5 44 153-196 45-88 (95)
80 3gt7_A Sensor protein; structu 29.7 74 0.0025 23.0 4.7 29 157-188 6-34 (154)
81 3e17_A Tight junction protein 29.5 68 0.0023 21.9 4.2 35 154-188 39-73 (88)
82 1cdo_A Alcohol dehydrogenase; 29.5 79 0.0027 27.2 5.5 33 154-190 189-222 (374)
83 3grc_A Sensor protein, kinase; 29.3 98 0.0033 21.5 5.2 29 157-188 5-33 (140)
84 3m6m_D Sensory/regulatory prot 28.8 64 0.0022 23.1 4.1 29 157-188 13-41 (143)
85 2jhf_A Alcohol dehydrogenase E 28.7 83 0.0028 27.0 5.5 33 154-190 188-221 (374)
86 4ej6_A Putative zinc-binding d 28.5 84 0.0029 27.2 5.5 33 154-190 179-212 (370)
87 1pqw_A Polyketide synthase; ro 28.5 93 0.0032 23.8 5.3 34 154-190 35-68 (198)
88 2fzw_A Alcohol dehydrogenase c 28.5 77 0.0026 27.2 5.2 33 154-190 187-220 (373)
89 1e3i_A Alcohol dehydrogenase, 28.1 86 0.0029 26.9 5.5 33 154-190 192-225 (376)
90 2hcy_A Alcohol dehydrogenase 1 27.8 91 0.0031 26.4 5.5 34 154-190 166-199 (347)
91 1p0f_A NADP-dependent alcohol 27.3 83 0.0028 27.0 5.2 33 154-190 188-221 (373)
92 2d92_A INAD-like protein; PDZ 26.8 1.2E+02 0.0041 21.3 5.3 36 154-189 62-97 (108)
93 3i42_A Response regulator rece 26.5 82 0.0028 21.5 4.3 26 159-187 4-29 (127)
94 3gqv_A Enoyl reductase; medium 26.5 99 0.0034 26.6 5.6 33 156-191 163-195 (371)
95 4b7c_A Probable oxidoreductase 26.1 84 0.0029 26.4 4.9 36 153-191 145-180 (336)
96 1f8f_A Benzyl alcohol dehydrog 26.1 90 0.0031 26.8 5.2 34 153-190 186-220 (371)
97 3r68_A Na(+)/H(+) exchange reg 25.4 84 0.0029 21.3 4.1 35 155-189 47-81 (95)
98 3ip1_A Alcohol dehydrogenase, 25.4 1E+02 0.0034 26.9 5.5 34 154-191 210-244 (404)
99 2dph_A Formaldehyde dismutase; 25.3 1E+02 0.0035 26.8 5.5 33 154-190 182-215 (398)
100 4eye_A Probable oxidoreductase 25.1 87 0.003 26.6 4.9 35 154-191 156-190 (342)
101 3o46_A Maguk P55 subfamily mem 25.0 99 0.0034 21.0 4.4 33 154-186 46-78 (93)
102 2j3h_A NADP-dependent oxidored 24.4 90 0.0031 26.3 4.8 34 154-190 152-185 (345)
103 4eez_A Alcohol dehydrogenase 1 24.2 1.3E+02 0.0043 25.3 5.8 34 154-191 160-194 (348)
104 1wg6_A Hypothetical protein (r 24.0 85 0.0029 23.1 4.1 30 155-184 74-103 (127)
105 1g9o_A NHE-RF; PDZ domain, com 24.0 1.1E+02 0.0037 20.5 4.4 34 155-188 45-78 (91)
106 1v3u_A Leukotriene B4 12- hydr 23.8 1.3E+02 0.0043 25.3 5.6 34 154-190 142-175 (333)
107 3foj_A Uncharacterized protein 23.7 1.5E+02 0.0051 20.3 5.2 31 154-187 52-82 (100)
108 3gms_A Putative NADPH:quinone 23.7 89 0.003 26.4 4.7 36 153-191 140-175 (340)
109 3gaz_A Alcohol dehydrogenase s 23.4 1.2E+02 0.0042 25.7 5.6 36 153-191 146-181 (343)
110 3eul_A Possible nitrate/nitrit 23.4 95 0.0032 22.1 4.2 27 156-185 13-39 (152)
111 3jyn_A Quinone oxidoreductase; 23.3 1.1E+02 0.0039 25.6 5.3 35 154-191 137-171 (325)
112 3m6i_A L-arabinitol 4-dehydrog 23.2 95 0.0033 26.5 4.8 34 154-191 176-210 (363)
113 1dcf_A ETR1 protein; beta-alph 23.1 1.4E+02 0.0049 20.6 5.0 30 157-189 6-35 (136)
114 1kol_A Formaldehyde dehydrogen 23.1 1.2E+02 0.0041 26.2 5.5 30 154-187 182-211 (398)
115 1yb5_A Quinone oxidoreductase; 23.0 1.2E+02 0.0043 25.8 5.5 34 154-190 167-200 (351)
116 2pln_A HP1043, response regula 23.0 1.5E+02 0.005 20.6 5.1 31 156-189 16-46 (137)
117 4a2c_A Galactitol-1-phosphate 22.8 1.3E+02 0.0044 25.2 5.5 34 154-191 157-190 (346)
118 3tqh_A Quinone oxidoreductase; 22.7 1.1E+02 0.0036 25.7 4.9 36 153-191 148-183 (321)
119 3snk_A Response regulator CHEY 22.6 1E+02 0.0036 21.4 4.2 30 157-189 13-43 (135)
120 3hix_A ALR3790 protein; rhodan 22.6 79 0.0027 22.2 3.5 31 155-188 49-79 (106)
121 3kto_A Response regulator rece 22.6 92 0.0031 21.8 3.9 29 158-189 6-34 (136)
122 3h1g_A Chemotaxis protein CHEY 22.6 89 0.003 21.6 3.8 27 158-187 5-31 (129)
123 3goh_A Alcohol dehydrogenase, 22.6 1.2E+02 0.0041 25.2 5.2 35 153-191 138-172 (315)
124 4dup_A Quinone oxidoreductase; 22.5 1.1E+02 0.0036 26.2 4.9 36 153-191 163-198 (353)
125 3kyj_B CHEY6 protein, putative 22.3 82 0.0028 22.3 3.6 13 156-168 11-23 (145)
126 1vdy_A Hypothetical protein (R 22.2 15 0.00053 28.9 -0.5 47 81-128 16-64 (140)
127 1gu7_A Enoyl-[acyl-carrier-pro 22.2 1.2E+02 0.0041 25.7 5.3 35 154-191 163-198 (364)
128 2iwo_A Multiple PDZ domain pro 22.1 1.4E+02 0.0048 21.6 5.0 34 154-187 71-104 (120)
129 3egg_C Spinophilin; PP1, serin 22.1 1.3E+02 0.0043 23.6 5.0 35 154-188 129-163 (170)
130 3mm4_A Histidine kinase homolo 22.0 1.3E+02 0.0045 23.2 5.0 28 156-186 59-86 (206)
131 3qwb_A Probable quinone oxidor 22.0 1.1E+02 0.0039 25.6 5.0 35 154-191 145-179 (334)
132 1piw_A Hypothetical zinc-type 21.8 1.3E+02 0.0044 25.7 5.4 33 154-190 176-208 (360)
133 3krt_A Crotonyl COA reductase; 21.7 1.3E+02 0.0045 26.7 5.6 36 154-192 225-260 (456)
134 3fpc_A NADP-dependent alcohol 21.7 91 0.0031 26.5 4.3 33 154-190 163-196 (352)
135 3fbg_A Putative arginate lyase 21.7 1.3E+02 0.0045 25.5 5.4 32 157-191 150-181 (346)
136 2j48_A Two-component sensor ki 21.7 1.7E+02 0.0057 19.0 5.0 27 159-188 2-28 (119)
137 2a9o_A Response regulator; ess 21.6 1.5E+02 0.0053 19.6 4.8 26 160-188 3-28 (120)
138 3jte_A Response regulator rece 21.6 1.4E+02 0.0047 20.8 4.7 27 159-188 4-30 (143)
139 2c0c_A Zinc binding alcohol de 21.5 1.1E+02 0.0039 26.2 4.9 34 154-190 160-193 (362)
140 2vn8_A Reticulon-4-interacting 21.4 1.5E+02 0.0052 25.4 5.8 33 155-190 181-213 (375)
141 2dc2_A GOPC, golgi associated 21.1 1.4E+02 0.0047 20.8 4.6 35 154-188 53-87 (103)
142 3tum_A Shikimate dehydrogenase 21.1 1.3E+02 0.0045 25.4 5.2 30 156-189 123-152 (269)
143 2jtq_A Phage shock protein E; 20.8 1.5E+02 0.0053 19.5 4.6 31 156-189 39-69 (85)
144 4dad_A Putative pilus assembly 20.6 1.2E+02 0.004 21.3 4.2 32 156-190 18-50 (146)
145 3ilm_A ALR3790 protein; rhodan 20.5 95 0.0033 23.2 3.8 32 154-188 52-83 (141)
146 2lpm_A Two-component response 20.3 36 0.0012 25.4 1.3 29 157-188 7-35 (123)
147 3b76_A E3 ubiquitin-protein li 20.2 1.3E+02 0.0045 21.9 4.4 35 154-188 71-105 (118)
148 3uko_A Alcohol dehydrogenase c 20.1 1E+02 0.0034 26.6 4.3 34 153-190 189-223 (378)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.94 E-value=1.3e-26 Score=192.69 Aligned_cols=150 Identities=44% Similarity=0.788 Sum_probs=122.9
Q ss_pred cchhhhcccccCCchHHHHHHhhcccCCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee--------
Q 027972 62 QPQQMASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------- 133 (216)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------- 133 (216)
+.+.|.... ..++.|++.||.+||||++|+.|+|++.++.||+.++.+++.|++.+++.++|+|+|.
T Consensus 4 ~~~~~~~~~-----~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a 78 (190)
T 2dy0_A 4 GSSGMTATA-----QQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFG 78 (190)
T ss_dssp -----CCCH-----HHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHH
T ss_pred CcccccccH-----HHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHH
Confidence 445565442 2467799999999999999999999999999999999999999999987778988821
Q ss_pred -----------------------EEEEeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 134 -----------------------VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 134 -----------------------~ia~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+...|..+|+.+.+++..+.+.+|++||||||++|||+|+.+++++|+++|++++.
T Consensus 79 ~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~ 158 (190)
T 2dy0_A 79 APVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVAD 158 (190)
T ss_dssp HHHHHHHTCEEEEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCEEEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEE
Confidence 122233345666667776556679999999999999999999999999999999999
Q ss_pred EEEEEEccCcccccccC--CCCceeccC
Q 027972 191 CACVIELPELKGRERLG--EKPLFVLVS 216 (216)
Q Consensus 191 vavlie~~~~~g~e~L~--~~pv~sLl~ 216 (216)
++|++++.+++|+++|. ++|+++|++
T Consensus 159 ~~~l~~~~~~~~~~~l~~~g~~v~sl~~ 186 (190)
T 2dy0_A 159 AAFIINLFDLGGEQRLEKQGITSYSLVP 186 (190)
T ss_dssp EEEEEEEGGGCHHHHHHTTTCEEEEEEE
T ss_pred EEEEEEccCcchHHHHhhCCCcEEEEEE
Confidence 99999999888999996 799999863
No 2
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.94 E-value=5.3e-26 Score=188.63 Aligned_cols=140 Identities=34% Similarity=0.625 Sum_probs=119.4
Q ss_pred hHHHHHHhhcccCCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC----CCccEEEee------------------
Q 027972 76 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGE------------------ 133 (216)
Q Consensus 76 ~~~~~l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~----~~iDvVvG~------------------ 133 (216)
...+.|++.+|.+|+||++|+.|+|++.++.+|+.++.+++.|++.+.+ .++|+|+|.
T Consensus 5 ~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p 84 (187)
T 1g2q_A 5 SYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVG 84 (187)
T ss_dssp HHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCC
Confidence 3456799999999999999999999999999999999999999998875 468888821
Q ss_pred -------------EEEEeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Q 027972 134 -------------VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 200 (216)
Q Consensus 134 -------------~ia~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~ 200 (216)
.+...|..+|+.+.+++..+...+|++||||||++|||+|+.+++++|+++|+++++++++++++++
T Consensus 85 ~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 164 (187)
T 1g2q_A 85 FVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFL 164 (187)
T ss_dssp EEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCS
T ss_pred EEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCc
Confidence 1222333455666677766666789999999999999999999999999999999999999999988
Q ss_pred ccccccCCCCceeccC
Q 027972 201 KGRERLGEKPLFVLVS 216 (216)
Q Consensus 201 ~g~e~L~~~pv~sLl~ 216 (216)
+|+++| ++|++||++
T Consensus 165 ~g~~~l-~~~~~sl~~ 179 (187)
T 1g2q_A 165 KGRSKL-NAPVFTLLN 179 (187)
T ss_dssp SCCCCC-SSCEEECC-
T ss_pred Cchhhc-CccEEEEEE
Confidence 899999 999999974
No 3
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.93 E-value=5.2e-26 Score=186.87 Aligned_cols=142 Identities=44% Similarity=0.805 Sum_probs=118.9
Q ss_pred chHHHHHHhhcccCCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcCCC---ccEEEee------------------
Q 027972 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGE------------------ 133 (216)
Q Consensus 75 ~~~~~~l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~---iDvVvG~------------------ 133 (216)
++.++.|++.||.+||||++|++|.|++.++.||+..+.+++.|++.+++.+ +|+|+|.
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 4567889999999999999999999999999999999999999999886533 7888821
Q ss_pred -EEEEe------------eecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Q 027972 134 -VISEE------------YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 200 (216)
Q Consensus 134 -~ia~~------------y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~ 200 (216)
.+.++ +..+++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++++.++++++++..
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL 162 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 11111 11233444566665555789999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCceeccC
Q 027972 201 KGRERLGEKPLFVLVS 216 (216)
Q Consensus 201 ~g~e~L~~~pv~sLl~ 216 (216)
+|.++|.++|+++|++
T Consensus 163 ~~~~~l~~~~~~sl~~ 178 (180)
T 1zn8_A 163 KGREKLAPVPFFSLLQ 178 (180)
T ss_dssp CHHHHHTTSCEEEEEE
T ss_pred chhhhhcCCceEEEEe
Confidence 8999999999999873
No 4
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.93 E-value=4.4e-26 Score=196.70 Aligned_cols=141 Identities=26% Similarity=0.492 Sum_probs=121.8
Q ss_pred chHHHHHHhhcccC-CCCCCCCc-EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-----------------
Q 027972 75 DPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE----------------- 133 (216)
Q Consensus 75 ~~~~~~l~~~Ir~~-PdfPk~Gi-~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~----------------- 133 (216)
+...+.|++.||++ ||||++|+ .|+|++.++.||+.++.+++.|++.+++. ++|+|+|.
T Consensus 16 ~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~~ 95 (236)
T 1qb7_A 16 HALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEI 95 (236)
T ss_dssp SHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTC
T ss_pred hHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhCC
Confidence 55677899999999 99999999 99999999999999999999999999875 78999831
Q ss_pred --EEEE-------------eeeccc---CccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEE
Q 027972 134 --VISE-------------EYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 195 (216)
Q Consensus 134 --~ia~-------------~y~~ey---G~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavli 195 (216)
.+.+ .|..+| +.+.++++.+.+.+|++||||||++|||+|+.+++++|+++|++++++++++
T Consensus 96 p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~ 175 (236)
T 1qb7_A 96 PFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSIL 175 (236)
T ss_dssp CEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEE
Confidence 2222 233344 5556777767777999999999999999999999999999999999999999
Q ss_pred EccCcccccccC--------CCCceecc
Q 027972 196 ELPELKGRERLG--------EKPLFVLV 215 (216)
Q Consensus 196 e~~~~~g~e~L~--------~~pv~sLl 215 (216)
++.+++|+++|. |+|+++|+
T Consensus 176 ~~~~~~g~~~l~~~~~~~~~g~~v~sl~ 203 (236)
T 1qb7_A 176 SIPFLKAAEKIHSTANSRYKDIKFISLL 203 (236)
T ss_dssp ECGGGCHHHHHHHHHHHTTTTCCEEEEE
T ss_pred EcccccHHHHHhhhcccccCCCcEEEEE
Confidence 999888999996 79999986
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.92 E-value=9.9e-25 Score=181.04 Aligned_cols=141 Identities=34% Similarity=0.530 Sum_probs=118.3
Q ss_pred chHHHHHHhhcccCCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee-------------------EE
Q 027972 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------VI 135 (216)
Q Consensus 75 ~~~~~~l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------~i 135 (216)
++.++.|++.||.+|+||++|+.|.|+..++.||+.++.+++.|++.+++.++|+|+|. .+
T Consensus 2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~ 81 (186)
T 1l1q_A 2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 81 (186)
T ss_dssp CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence 35677899999999999999999999999999999999999999999887678988831 11
Q ss_pred E------------EeeecccCcc-ceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCE--EEEEEEEEEccCc
Q 027972 136 S------------EEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPEL 200 (216)
Q Consensus 136 a------------~~y~~eyG~~-~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~--vv~vavlie~~~~ 200 (216)
. ..|..++|.. .+++..+.+.+|++|||||||+|||+|+.+++++|+++|++ +++++++++++++
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~ 161 (186)
T 1l1q_A 82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL 161 (186)
T ss_dssp EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence 1 1222234433 45665555568999999999999999999999999999999 9999999999988
Q ss_pred ccccccCCCCceecc
Q 027972 201 KGRERLGEKPLFVLV 215 (216)
Q Consensus 201 ~g~e~L~~~pv~sLl 215 (216)
+|+++|.++++.+|+
T Consensus 162 ~g~~~l~~~~~~~~~ 176 (186)
T 1l1q_A 162 KGREKVGQKCTRLFS 176 (186)
T ss_dssp CHHHHHTTTCCCEEE
T ss_pred cHHHHHhhcCcceeh
Confidence 899999988887764
No 6
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.79 E-value=5.9e-19 Score=152.88 Aligned_cols=131 Identities=22% Similarity=0.367 Sum_probs=102.7
Q ss_pred hcccCC--CCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-------------------EEE
Q 027972 84 AIRVIP--DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE-------------------VIS 136 (216)
Q Consensus 84 ~Ir~~P--dfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~-------------------~ia 136 (216)
+++..| +|- +.|. +|+|++.++.+|+.++.+++.|++.+++. ++|+|+|+ .+.
T Consensus 38 av~f~~~g~F~l~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~v 117 (234)
T 3m3h_A 38 AVFLQPNDPFTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYV 117 (234)
T ss_dssp SEEECTTSCEECTTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEE
T ss_pred CEEECCCCCEEcCcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 455445 576 5676 89999999999999999999999999764 78999942 344
Q ss_pred EeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceec
Q 027972 137 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVL 214 (216)
Q Consensus 137 ~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sL 214 (216)
++..+.||+... ..+.+.+|++||||||++|||+|+.+++++|+++|+++++++|++++...+|+++|. |+|+++|
T Consensus 118 rk~~k~~G~~~~--i~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL 195 (234)
T 3m3h_A 118 RSKAKGHGKGNQ--IEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSL 195 (234)
T ss_dssp C---------CC--EESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEES
T ss_pred EEeeccCCcceE--EecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEE
Confidence 555566775432 136678999999999999999999999999999999999999999998777888884 7999998
Q ss_pred cC
Q 027972 215 VS 216 (216)
Q Consensus 215 l~ 216 (216)
+.
T Consensus 196 ~~ 197 (234)
T 3m3h_A 196 SD 197 (234)
T ss_dssp SC
T ss_pred ee
Confidence 74
No 7
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.78 E-value=6.1e-19 Score=153.64 Aligned_cols=131 Identities=24% Similarity=0.369 Sum_probs=102.4
Q ss_pred hcccCC--CCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-------------------EEE
Q 027972 84 AIRVIP--DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE-------------------VIS 136 (216)
Q Consensus 84 ~Ir~~P--dfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~-------------------~ia 136 (216)
+++..| +|- +.|. +|+|++.++.+|+.++.+++.|++.+++. ++|+|+|+ .+.
T Consensus 50 av~~~~~g~F~L~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~v 129 (243)
T 3dez_A 50 AVYLKPEEPFTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYI 129 (243)
T ss_dssp SEEECTTSCEEC---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEE
T ss_pred CEEEcCCCcEEeCCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEE
Confidence 445445 566 4676 79999999999999999999999999764 78999942 344
Q ss_pred EeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceec
Q 027972 137 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVL 214 (216)
Q Consensus 137 ~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sL 214 (216)
++..+.+|+... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++...+|+++|. ++|+++|
T Consensus 130 rk~~k~~G~~~~--ieg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL 207 (243)
T 3dez_A 130 RSKPKDHGAGNQ--IEGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTL 207 (243)
T ss_dssp CSSCC-----CC--EESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEES
T ss_pred EEeeccCCceeE--EEeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEE
Confidence 555556665432 135678999999999999999999999999999999999999999998777888884 7899998
Q ss_pred cC
Q 027972 215 VS 216 (216)
Q Consensus 215 l~ 216 (216)
+.
T Consensus 208 ~~ 209 (243)
T 3dez_A 208 SN 209 (243)
T ss_dssp SC
T ss_pred ee
Confidence 74
No 8
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.77 E-value=2.1e-18 Score=142.58 Aligned_cols=136 Identities=19% Similarity=0.236 Sum_probs=98.7
Q ss_pred HHHHHhhcccCCCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee--------------------
Q 027972 78 IAGISSAIRVIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------- 133 (216)
Q Consensus 78 ~~~l~~~Ir~~PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------- 133 (216)
++.|+...-.+.+|- ++|. .|+|++.++.+|+.++.+++.|++.+++.++|+|+|.
T Consensus 11 ~~ll~~~a~~~g~f~l~SG~~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~ 90 (180)
T 2p1z_A 11 AELVKELAVVHGKVTLSSGKEADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIH 90 (180)
T ss_dssp HHHHHHHTC---------------CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCE
T ss_pred HHHHHhCCeEeCcEEECCCCcCCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCC
Confidence 344554444456787 3453 7999999999999999999999999987788999832
Q ss_pred -EEEEeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCccccccc--CCCC
Q 027972 134 -VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL--GEKP 210 (216)
Q Consensus 134 -~ia~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L--~~~p 210 (216)
.+.++..++||... . ..+...+|++||||||++|||+|+.+++++|+++|++++++++++++++ +|++++ .++|
T Consensus 91 ~~~~rk~~~~~g~~~-~-~~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g~~~l~~~g~~ 167 (180)
T 2p1z_A 91 AFVVRKEAKKHGMQR-R-IEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-GAADVIAAEGLE 167 (180)
T ss_dssp EEEECSCCC-CC-CC-S-EESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-CHHHHHHTTTCC
T ss_pred eEEEEeccccccchh-h-ccCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-chHHHHHhcCCe
Confidence 23333334465432 1 1255578999999999999999999999999999999999999999986 788888 4799
Q ss_pred ceeccC
Q 027972 211 LFVLVS 216 (216)
Q Consensus 211 v~sLl~ 216 (216)
+++|++
T Consensus 168 ~~sl~~ 173 (180)
T 2p1z_A 168 YRYILG 173 (180)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 999874
No 9
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.77 E-value=2.2e-18 Score=161.66 Aligned_cols=127 Identities=23% Similarity=0.354 Sum_probs=103.5
Q ss_pred cCCCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee-------------------EEEEeeeccc
Q 027972 87 VIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------VISEEYSLEY 143 (216)
Q Consensus 87 ~~PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------~ia~~y~~ey 143 (216)
.+++|+ ++|. +|+|+++++.+|+.++.+++.|++++++.++|+|+|+ .+.++..++|
T Consensus 273 ~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k~~ 352 (453)
T 3qw4_B 273 RFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAKIY 352 (453)
T ss_dssp EESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC---
T ss_pred EECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeecccc
Confidence 367999 6787 7999999999999999999999999988889999932 4556666778
Q ss_pred CccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceeccC
Q 027972 144 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS 216 (216)
Q Consensus 144 G~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sLl~ 216 (216)
|+... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.+ +|+++|. |+|++||++
T Consensus 353 g~~~~--i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~-~g~~~l~~~g~~v~sL~~ 424 (453)
T 3qw4_B 353 GTKAA--IEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDM-GAKAFLNKLGYDFEAVVG 424 (453)
T ss_dssp ----C--EESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSS-SHHHHHHHTTCCEEEEEE
T ss_pred CcCce--EecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCc-chHHHHHhcCCCEEEEeE
Confidence 86643 2356789999999999999999999999999999999999999999975 7888884 799999863
No 10
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=139.32 Aligned_cols=124 Identities=19% Similarity=0.477 Sum_probs=100.8
Q ss_pred CCCCC-CCc---EEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEee-------------------EEEEeeeccc
Q 027972 89 PDFPK-PGI---MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGE-------------------VISEEYSLEY 143 (216)
Q Consensus 89 PdfPk-~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~--~~iDvVvG~-------------------~ia~~y~~ey 143 (216)
.+|-- .|. .|+|++.++.+|+.++.+++.|++.+.+ .++|+|+|. .+.++..++|
T Consensus 19 g~f~l~SG~~s~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~ 98 (205)
T 2wns_A 19 GDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDY 98 (205)
T ss_dssp EEEECTTSCEEEEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTS
T ss_pred CCeEECCCCcCCEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCcc
Confidence 34653 564 8899999999999999999999999875 478998832 2334444567
Q ss_pred CccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceecc
Q 027972 144 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 215 (216)
Q Consensus 144 G~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sLl 215 (216)
|..... .+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++. .+|.++|. ++|+++|+
T Consensus 99 g~~~~~--~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~ 169 (205)
T 2wns_A 99 GTKRLV--EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVC 169 (205)
T ss_dssp SSCCSE--ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEE
T ss_pred Cccccc--cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEE
Confidence 755322 36667999999999999999999999999999999999999999996 47888884 68999986
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.72 E-value=3.1e-17 Score=135.16 Aligned_cols=123 Identities=24% Similarity=0.327 Sum_probs=98.0
Q ss_pred CCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHh-cCC-CccEEEee-------------------EEEEeeecccC
Q 027972 90 DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGE-------------------VISEEYSLEYG 144 (216)
Q Consensus 90 dfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~-~~~-~iDvVvG~-------------------~ia~~y~~eyG 144 (216)
+|- ..|. +|+|+..++.+|+..+.+++.+++.+ ++. ++|+|+|. .+.++..++||
T Consensus 16 ~f~L~sG~~s~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g 95 (178)
T 2yzk_A 16 DFVLSSGRRSSVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHG 95 (178)
T ss_dssp EEECTTSCEEEEEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSC
T ss_pred CeEECCCCCCCeEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccC
Confidence 454 3454 69999999999999999999999998 654 57888832 22333334566
Q ss_pred ccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceeccC
Q 027972 145 KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS 216 (216)
Q Consensus 145 ~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sLl~ 216 (216)
.... + .+.+ +|++||||||++|||+|+.+++++|+++|++++.++++++++. +|.++|. ++|+++|++
T Consensus 96 ~~~~-i-~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~~ 165 (178)
T 2yzk_A 96 TLSQ-V-EGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVAT 165 (178)
T ss_dssp CCCC-C-BTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEEE
T ss_pred ccce-e-cccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEee
Confidence 5432 2 2454 8999999999999999999999999999999999999999987 7888884 689999863
No 12
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.72 E-value=8.8e-18 Score=136.74 Aligned_cols=126 Identities=19% Similarity=0.232 Sum_probs=98.5
Q ss_pred HHhhcccCCCCCCC-CcEEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee-------------------EEEEeee
Q 027972 81 ISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------VISEEYS 140 (216)
Q Consensus 81 l~~~Ir~~PdfPk~-Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------~ia~~y~ 140 (216)
|++.||.+|+||.+ |+ |+|...+..+++..+.+++.|++.+.+ ++|+|+|. .+.++..
T Consensus 8 ~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~ 85 (175)
T 1vch_A 8 VGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRR 85 (175)
T ss_dssp ETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSC
T ss_pred ecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecC
Confidence 67889999999987 76 589999999999999999999998876 68888821 1222222
Q ss_pred cccCcc---------------ceeeecCcc--cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccc
Q 027972 141 LEYGKD---------------VMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR 203 (216)
Q Consensus 141 ~eyG~~---------------~l~i~~~~i--~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~ 203 (216)
+.|++. .+++..+.+ .+|++||||||++|||+|+.+++++|+++|++.+.+++++++.. +
T Consensus 86 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~--~- 162 (175)
T 1vch_A 86 RPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGT--P- 162 (175)
T ss_dssp CTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSC--C-
T ss_pred CCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCC--C-
Confidence 223221 233322222 38999999999999999999999999999999999999999875 2
Q ss_pred cccCCCCceecc
Q 027972 204 ERLGEKPLFVLV 215 (216)
Q Consensus 204 e~L~~~pv~sLl 215 (216)
+.|+++|.
T Consensus 163 ----~~~~~sl~ 170 (175)
T 1vch_A 163 ----GLAVDTVA 170 (175)
T ss_dssp ----SSCCEEEE
T ss_pred ----CcceEEEE
Confidence 67888875
No 13
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.71 E-value=4.5e-17 Score=140.98 Aligned_cols=124 Identities=16% Similarity=0.292 Sum_probs=93.8
Q ss_pred CCCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-------------------------EEE
Q 027972 88 IPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE-------------------------VIS 136 (216)
Q Consensus 88 ~PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~-------------------------~ia 136 (216)
+.+|- +.|. .|+|+. ++.+|+.++.+++.|++.+.+. ++|+|+|+ .+.
T Consensus 38 ~G~F~L~SG~~Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~ 116 (232)
T 3mjd_A 38 FGEFTLKSGRISPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFD 116 (232)
T ss_dssp EEEEECTTSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEE
T ss_pred EeeEEecCCCccceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEE
Confidence 35676 4565 899985 6789999999999999999764 68999942 223
Q ss_pred EeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccc--------ccc--
Q 027972 137 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR--------ERL-- 206 (216)
Q Consensus 137 ~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~--------e~L-- 206 (216)
++..+.||+.... .+...+|++|||||||+|||+|+.+++++|+++|++++++++++++.+ +|+ +.+
T Consensus 117 RK~~k~~g~~~~i--~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~~~~a~~~~~~~ 193 (232)
T 3mjd_A 117 RKEAKDHGEGGVF--VGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDSDISATKKISQD 193 (232)
T ss_dssp CCC-------CCE--EESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTSSSCHHHHHHHH
T ss_pred EeecccCCCCceE--eccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccccchhHHHHHHH
Confidence 4444556654321 244568999999999999999999999999999999999999999986 565 444
Q ss_pred CCCCceecc
Q 027972 207 GEKPLFVLV 215 (216)
Q Consensus 207 ~~~pv~sLl 215 (216)
.|+|+++|+
T Consensus 194 ~gv~v~sL~ 202 (232)
T 3mjd_A 194 FNIPVLAVT 202 (232)
T ss_dssp HCCCEEEEE
T ss_pred cCCcEEEEE
Confidence 379999986
No 14
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.70 E-value=9.4e-17 Score=133.30 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=92.7
Q ss_pred CcEEEe-chhhhcCHHHHHHHHHHHHHHhcCCCccEEEee-------------------EEEEeeeccc-----------
Q 027972 95 GIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------VISEEYSLEY----------- 143 (216)
Q Consensus 95 Gi~f~D-it~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------~ia~~y~~ey----------- 143 (216)
++.|.| +.+...+|+.++.+++.|++.+++.++|+|+|. .+.++..+.+
T Consensus 21 ~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~ 100 (197)
T 1y0b_A 21 QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVY 100 (197)
T ss_dssp TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEEBSSCCSSCCSSEEEEEEE
T ss_pred CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEEEecCCCCCCCceEEEeee
Confidence 445554 344568999999999999999987678888832 1222211111
Q ss_pred ----Cc-cceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceecc
Q 027972 144 ----GK-DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 215 (216)
Q Consensus 144 ----G~-~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sLl 215 (216)
+. ..+++..+.+.+|++||||||++|||+|+.+++++|+++|++.+.+++++++++++|+++|. ++|+++|+
T Consensus 101 ~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~~sl~ 179 (197)
T 1y0b_A 101 SFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLA 179 (197)
T ss_dssp ETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCEEEEE
T ss_pred ccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcEEEEE
Confidence 10 12445444556899999999999999999999999999999999999999998778999986 68999886
No 15
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.68 E-value=1.2e-16 Score=142.07 Aligned_cols=135 Identities=23% Similarity=0.394 Sum_probs=100.4
Q ss_pred hHHHHHHhhcccCCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEee-------------------EEE
Q 027972 76 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGE-------------------VIS 136 (216)
Q Consensus 76 ~~~~~l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~-------------------~ia 136 (216)
.-++.|.+.++.. ...++| -|.++..++.||+.++.+++.|++.|++.++|+|+|. .+.
T Consensus 82 ~~~~~l~~~l~~~-~~v~~G-~f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~ 159 (291)
T 1o57_A 82 EFVQTLGQSLANP-ERILPG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIV 159 (291)
T ss_dssp HHHHHHHHHHTCG-GGEETT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHC-CCcccC-CeEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEE
Confidence 3456666666652 222344 3567899999999999999999999987788999831 222
Q ss_pred Eeeec---------cc--Cc----cceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcc
Q 027972 137 EEYSL---------EY--GK----DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK 201 (216)
Q Consensus 137 ~~y~~---------ey--G~----~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~ 201 (216)
++..+ +| |+ ..+++....+.+|++|||||||+|||+|+.+++++|+++||+++++++++++.+
T Consensus 160 rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~-- 237 (291)
T 1o57_A 160 RKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEG-- 237 (291)
T ss_dssp BCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESS--
T ss_pred EEeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCc--
Confidence 22111 12 22 134555555679999999999999999999999999999999999999999987
Q ss_pred cccccCCCCceecc
Q 027972 202 GRERLGEKPLFVLV 215 (216)
Q Consensus 202 g~e~L~~~pv~sLl 215 (216)
+++++ ++|++||+
T Consensus 238 ~~~~l-~~~~~SL~ 250 (291)
T 1o57_A 238 VDERL-VDEYMSLL 250 (291)
T ss_dssp CTTSC-CSCCEEEE
T ss_pred ccccc-CCceEEEE
Confidence 34555 47899886
No 16
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.68 E-value=1.5e-16 Score=138.27 Aligned_cols=123 Identities=19% Similarity=0.334 Sum_probs=91.4
Q ss_pred CCCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-------------------------EEE
Q 027972 88 IPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE-------------------------VIS 136 (216)
Q Consensus 88 ~PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~-------------------------~ia 136 (216)
+.+|- ++|. .|+|+ .++.+|+.++.+++.|++.+.+. ++|+|+|+ .+.
T Consensus 45 ~G~F~L~SG~~Sp~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~ 123 (238)
T 3n2l_A 45 FGEFTLKSGRKSPYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFN 123 (238)
T ss_dssp EEEEECSSSCEEEEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEE
T ss_pred ecCEEecCCCcccEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEE
Confidence 34676 4565 89998 47799999999999999999753 68999942 123
Q ss_pred EeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccc------c---C
Q 027972 137 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER------L---G 207 (216)
Q Consensus 137 ~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~------L---~ 207 (216)
++..+.+|+.... .+...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ +|++. + .
T Consensus 124 RK~~k~~g~~~~i--~G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e-gG~~~l~a~~~~~~~~ 199 (238)
T 3n2l_A 124 RKEAKNHGEGGNL--VGSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGELSAIQEVERDF 199 (238)
T ss_dssp CCC--------CE--EESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC-BCSSSSBHHHHHHHHH
T ss_pred eeccCCCCCCceE--eccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc-CccchhhHHHHHHHHc
Confidence 3444455543211 2445689 9999999999999999999999999999999999999985 45443 2 3
Q ss_pred CCCceecc
Q 027972 208 EKPLFVLV 215 (216)
Q Consensus 208 ~~pv~sLl 215 (216)
|+|++||+
T Consensus 200 Gv~v~SL~ 207 (238)
T 3n2l_A 200 GCAVISIV 207 (238)
T ss_dssp CCEEEEEE
T ss_pred CCCEEEEE
Confidence 79999986
No 17
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.68 E-value=1.8e-16 Score=134.45 Aligned_cols=123 Identities=17% Similarity=0.369 Sum_probs=95.6
Q ss_pred CCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEee-------------------------EEEE
Q 027972 89 PDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGE-------------------------VISE 137 (216)
Q Consensus 89 PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~--~~iDvVvG~-------------------------~ia~ 137 (216)
.+|- +.|. .|+| .+++.+|+.++.+++.|++.+.+ .++|+|+|. .+.+
T Consensus 21 g~F~l~SG~~s~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~r 99 (213)
T 1lh0_A 21 GEFTLKSGRKSPYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNR 99 (213)
T ss_dssp EEEECTTSCEEEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEEC
T ss_pred CCEEECCCCcccEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 4565 3565 8899 67999999999999999999865 368999832 1122
Q ss_pred eeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCccccccc---------CC
Q 027972 138 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---------GE 208 (216)
Q Consensus 138 ~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L---------~~ 208 (216)
+..+.||.... + .+...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ +|+++| .|
T Consensus 100 k~~~~~~~~~~-~-~g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~g 175 (213)
T 1lh0_A 100 KEAKDHGEGGS-L-VGSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG 175 (213)
T ss_dssp SSCCSSTTCSS-E-EESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred eccCccCCCCc-e-eCCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHcC
Confidence 22233443321 1 1444689 9999999999999999999999999999999999999998 788776 48
Q ss_pred CCceeccC
Q 027972 209 KPLFVLVS 216 (216)
Q Consensus 209 ~pv~sLl~ 216 (216)
+|+++|++
T Consensus 176 ~~v~sl~~ 183 (213)
T 1lh0_A 176 CKVISIIT 183 (213)
T ss_dssp CEEEEEEE
T ss_pred CCeEEEEE
Confidence 99999863
No 18
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.66 E-value=8.5e-16 Score=131.16 Aligned_cols=124 Identities=19% Similarity=0.297 Sum_probs=96.5
Q ss_pred CCCC-CCCc---EEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEee----------------------------E
Q 027972 89 PDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGE----------------------------V 134 (216)
Q Consensus 89 PdfP-k~Gi---~f~Dit~Ll~dP~~~~~l~~~lae~~~~--~~iDvVvG~----------------------------~ 134 (216)
.+|- ++|. .|+| .+++.+|+.++.+++.|++.+.+ .++|+|+|+ .
T Consensus 25 g~F~l~SG~~s~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~ 103 (226)
T 2ps1_A 25 GSFKLKSGRESPYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYA 103 (226)
T ss_dssp EEEECTTSCEEEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEE
T ss_pred CCEEeccCCcCCEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEE
Confidence 4675 3564 8899 56999999999999999999875 368888732 1
Q ss_pred EEEeeecccCccceeeecCcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCccccc----c-----
Q 027972 135 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE----R----- 205 (216)
Q Consensus 135 ia~~y~~eyG~~~l~i~~~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e----~----- 205 (216)
+.++..+.||.+.+.. +...+|++|||||||+|||+|+.+++++|+++|++++++++++++.+. |++ +
T Consensus 104 ~~rk~~k~~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~~ 180 (226)
T 2ps1_A 104 FNRKEAKDHGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSATQ 180 (226)
T ss_dssp EEEEEEESSTTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHHH
T ss_pred EEechhhhcCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHHH
Confidence 2334445566655443 333589999999999999999999999999999999999999999974 554 2
Q ss_pred ----cCCCCceeccC
Q 027972 206 ----LGEKPLFVLVS 216 (216)
Q Consensus 206 ----L~~~pv~sLl~ 216 (216)
..|+|+++|++
T Consensus 181 ~~~~~~g~~v~sl~~ 195 (226)
T 2ps1_A 181 TVSKKYGIPVLSIVS 195 (226)
T ss_dssp HHHHHHTCCEEEEEE
T ss_pred HHHHhcCCeEEEEec
Confidence 34899999863
No 19
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.64 E-value=9.3e-16 Score=129.21 Aligned_cols=117 Identities=23% Similarity=0.336 Sum_probs=91.6
Q ss_pred EEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEee-------------------EEEEeeecccCccceeeecCcc
Q 027972 97 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGE-------------------VISEEYSLEYGKDVMEMHVGAV 155 (216)
Q Consensus 97 ~f~Dit~Ll~dP~~~~~l~~~lae~~~~~--~iDvVvG~-------------------~ia~~y~~eyG~~~l~i~~~~i 155 (216)
.|+|++.++.+|+.++.+++.|++.+.+. ++|+|+|+ .+.++..+.+|... .+ .+..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~~-~i-~g~~ 114 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGN-QI-EGRV 114 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----CC-SE-ESCC
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCcc-ee-cCCC
Confidence 68999999999999999999999988642 67888832 22222222344321 11 2455
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC--CCCceecc
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 215 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~--~~pv~sLl 215 (216)
.+|++||||||++|||+|+.+++++|+++|+++++++++++++..+|.++|. ++|+.+++
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~ 176 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLS 176 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESC
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEe
Confidence 7899999999999999999999999999999999999999998767888885 68888875
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.62 E-value=1.5e-15 Score=129.00 Aligned_cols=112 Identities=18% Similarity=0.296 Sum_probs=86.5
Q ss_pred CCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC-C--CccEEEee----------------------EEE-Eeeec
Q 027972 88 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD-K--NISVVAGE----------------------VIS-EEYSL 141 (216)
Q Consensus 88 ~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~-~--~iDvVvG~----------------------~ia-~~y~~ 141 (216)
-|+||++|++..|+++++.+++.++..++.|++.+.+ . +.++|+|+ .+. ..|..
T Consensus 17 ~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~~ 96 (204)
T 3hvu_A 17 NLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGH 96 (204)
T ss_dssp --CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSG
T ss_pred CCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEecC
Confidence 4899999999999999999999999999999877643 1 46788732 111 12332
Q ss_pred c-cCccceeeecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 142 E-YGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 142 e-yG~~~l~i~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
+ ++++.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 97 ~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 97 STVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp GGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred CCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 1 23344555433 2358999999999999999999999999999999999999999875
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.49 E-value=5.8e-14 Score=120.63 Aligned_cols=112 Identities=20% Similarity=0.208 Sum_probs=87.8
Q ss_pred CCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee-----------------------------E-
Q 027972 88 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE-----------------------------V- 134 (216)
Q Consensus 88 ~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~-----------------------------~- 134 (216)
..+||+||++|.|++.++.+++.+...++.|++.+.+ .+.++|+|. .
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 4689999999999999999999999999999988753 356777721 1
Q ss_pred -E---E-EeeecccCccceeeecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 135 -I---S-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 135 -i---a-~~y~~eyG~~~l~i~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
+ . ..|..+++.+.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 1 1 13433333344555432 2358999999999999999999999999999999999999999875
No 22
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.48 E-value=4.7e-14 Score=119.89 Aligned_cols=112 Identities=16% Similarity=0.259 Sum_probs=83.3
Q ss_pred CCCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee--------------------------EEEE-
Q 027972 88 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE--------------------------VISE- 137 (216)
Q Consensus 88 ~PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~--------------------------~ia~- 137 (216)
.+|||+||++|.|++.++.+++.++..++.|++.+.+ .+.++|+|. .+..
T Consensus 18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~ 97 (217)
T 1z7g_A 18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD 97 (217)
T ss_dssp GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence 4689999999999999999999999999999987752 356777721 1111
Q ss_pred -----eeecccCccceeeecC---cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 138 -----EYSLEYGKDVMEMHVG---AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 138 -----~y~~eyG~~~l~i~~~---~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
.|..+++.+.+.+..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 98 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 98 FIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp EECBC----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred eEEEEEecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 2222222233444321 2358999999999999999999999999999999999999999875
No 23
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.46 E-value=1.9e-13 Score=112.35 Aligned_cols=103 Identities=15% Similarity=0.210 Sum_probs=74.9
Q ss_pred EEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee-------------------EE----EEeeecccCccceee
Q 027972 97 MFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE-------------------VI----SEEYSLEYGKDVMEM 150 (216)
Q Consensus 97 ~f~Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~-------------------~i----a~~y~~eyG~~~l~i 150 (216)
++.|++.++.+++.++.++..|++++.+ .+.++|+|+ .+ ...|.++++.+.+++
T Consensus 6 ~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~~~~~~ 85 (183)
T 1hgx_A 6 MMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSYSGTKSTGNLTI 85 (183)
T ss_dssp -CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC---------CEE
T ss_pred cCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEecCCcccccceEE
Confidence 5578999999999999999999988763 257888832 11 123433333333333
Q ss_pred ecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 151 HVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 151 ~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
... ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 86 ~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 86 SKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp EECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred eecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 322 2368999999999999999999999999999999999999999875
No 24
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.41 E-value=4.5e-13 Score=114.27 Aligned_cols=111 Identities=22% Similarity=0.308 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee--------------------------E-----
Q 027972 89 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE--------------------------V----- 134 (216)
Q Consensus 89 PdfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~--------------------------~----- 134 (216)
.+||.||.+|.|++.++.+++.+...+..|++.+.+ .+.++|+|. .
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 469999998889999999999999999999887753 356777721 0
Q ss_pred EE-EeeecccCccceeeecC---cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 135 IS-EEYSLEYGKDVMEMHVG---AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 135 ia-~~y~~eyG~~~l~i~~~---~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
+. ..|..+++.+.+.+..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 107 i~~~~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 107 IRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEEC----------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEeccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 11 12322223333444431 2358999999999999999999999999999999999999999775
No 25
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.37 E-value=2.7e-12 Score=101.91 Aligned_cols=96 Identities=23% Similarity=0.354 Sum_probs=68.8
Q ss_pred hhcCHHHHHHHHHHHHHHhcCCCccEEEee---------------------EEEEeeecccCc----cceeeecCcccCC
Q 027972 104 LLLDTKAFRDTIDLFVERYKDKNISVVAGE---------------------VISEEYSLEYGK----DVMEMHVGAVQAG 158 (216)
Q Consensus 104 Ll~dP~~~~~l~~~lae~~~~~~iDvVvG~---------------------~ia~~y~~eyG~----~~l~i~~~~i~~G 158 (216)
++.+.+.+..+++.|++.+++.++|+|+|. .+...+..+++. ..+........+|
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPVITIPIHGDLKD 83 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCEEEECCCSCCBT
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccccceeEeccCCcCCCC
Confidence 456677788888888888765567888721 122222222221 1233322334689
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 159 ERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 159 ~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
++||||||++|||+|+.+++++|+++|++.+.+++++.++.
T Consensus 84 k~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 84 KRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred CEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 99999999999999999999999999999999999999875
No 26
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.35 E-value=2e-12 Score=113.04 Aligned_cols=110 Identities=20% Similarity=0.302 Sum_probs=87.5
Q ss_pred CCCCCCcEEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee---------------------------------
Q 027972 90 DFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE--------------------------------- 133 (216)
Q Consensus 90 dfPk~Gi~f~Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~--------------------------------- 133 (216)
.|..|..++.|++.++.+++.++..++.|++.+.+ .+.++|+|.
T Consensus 48 ~f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v 127 (250)
T 3ozf_A 48 SFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGE 127 (250)
T ss_dssp GSCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred cccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceE
Confidence 36667778889999999999999999988876642 145777621
Q ss_pred --EEEEeeecccCccceeeecCcc--cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 134 --VISEEYSLEYGKDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 134 --~ia~~y~~eyG~~~l~i~~~~i--~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
+-...|..+++++.+++..+.. .+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 128 ~fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 128 HYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0123566666666677765433 48999999999999999999999999999999999999999985
No 27
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.30 E-value=9.6e-12 Score=103.83 Aligned_cols=103 Identities=16% Similarity=0.216 Sum_probs=75.1
Q ss_pred EEEechhhhcCHHHHHHHHHHHHHHhcC-C--CccEEEee-----------------E--E---E-Eeeecc-cCcccee
Q 027972 97 MFQDITTLLLDTKAFRDTIDLFVERYKD-K--NISVVAGE-----------------V--I---S-EEYSLE-YGKDVME 149 (216)
Q Consensus 97 ~f~Dit~Ll~dP~~~~~l~~~lae~~~~-~--~iDvVvG~-----------------~--i---a-~~y~~e-yG~~~l~ 149 (216)
+..|+++++.+++.++..++.|++.+.+ . +.++|+|. . + . ..|..+ .+++.++
T Consensus 4 ~~~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~~~~~~v~ 83 (186)
T 3o7m_A 4 MNIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTETTGKVK 83 (186)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC-------CEE
T ss_pred ccccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCCcccCcEE
Confidence 3458899999999999999999887643 1 46777732 1 1 1 123211 1223455
Q ss_pred eecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 150 MHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 150 i~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
+..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 84 i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 84 LLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp EEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 5443 2358999999999999999999999999999999999999999885
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.24 E-value=3.1e-11 Score=99.56 Aligned_cols=100 Identities=18% Similarity=0.290 Sum_probs=72.5
Q ss_pred echhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee----------------------EEE-Eeeeccc-Cccceeeec
Q 027972 100 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE----------------------VIS-EEYSLEY-GKDVMEMHV 152 (216)
Q Consensus 100 Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~----------------------~ia-~~y~~ey-G~~~l~i~~ 152 (216)
|++.++.+++.+...+..|++.+.+ .+.++|+|. .+. ..|..+. .++.+++..
T Consensus 11 ~~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~~~~~~~~~~~ 90 (185)
T 2geb_A 11 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKSSGIVKIIK 90 (185)
T ss_dssp GEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTHHHHCCEEEEE
T ss_pred ccceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCCccCccEEEec
Confidence 3566888999999999989887753 256788732 111 1232111 112333332
Q ss_pred C--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 153 G--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 153 ~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
. ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 91 ~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 91 DHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp CCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 2 2358999999999999999999999999999999999999999875
No 29
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.20 E-value=6.8e-11 Score=105.02 Aligned_cols=97 Identities=25% Similarity=0.365 Sum_probs=71.1
Q ss_pred HHHHHHHhcCCCccEEEee-------------------EEEEeeecccCccceeeec-CcccCCCEEEEEeccccccHHH
Q 027972 115 IDLFVERYKDKNISVVAGE-------------------VISEEYSLEYGKDVMEMHV-GAVQAGERALIVDDLVATGGTL 174 (216)
Q Consensus 115 ~~~lae~~~~~~iDvVvG~-------------------~ia~~y~~eyG~~~l~i~~-~~i~~G~rVLIVDDVitTGgTl 174 (216)
...|++++++.+.++|+|+ .+.+++.+. .+.+++.. ....+|++||||||+++||+|+
T Consensus 142 ~~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~--~g~v~i~~~~~dv~gk~vliVDDii~TG~Tl 219 (286)
T 3lrt_A 142 NDAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRID--DRTVEMKVPNVDVNGKKLLIVDDIISTGGTI 219 (286)
T ss_dssp HHHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEET--TEEEEEEESCCCCTTCEEEEEEEEESSCHHH
T ss_pred HHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecC--CCcEEEeeccccCCcCEEEEEeccccccHHH
Confidence 3445666665567888832 233444433 33454432 2235899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEEEEEEEccCcccccccCCCCceec
Q 027972 175 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 214 (216)
Q Consensus 175 ~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~~pv~sL 214 (216)
.+++++|++.|++.+.++++|+....+|.++| +.++..+
T Consensus 220 ~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~v 258 (286)
T 3lrt_A 220 AKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEI 258 (286)
T ss_dssp HHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred HHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence 99999999999999999999999877888888 6555443
No 30
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.20 E-value=5.7e-11 Score=96.95 Aligned_cols=99 Identities=18% Similarity=0.297 Sum_probs=64.7
Q ss_pred echhhhcCHHHHHHHHHHHHHHhcC----CCccEEEee-----------------------EE---E-Eeeeccc---Cc
Q 027972 100 DITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGE-----------------------VI---S-EEYSLEY---GK 145 (216)
Q Consensus 100 Dit~Ll~dP~~~~~l~~~lae~~~~----~~iDvVvG~-----------------------~i---a-~~y~~ey---G~ 145 (216)
|...++.+++.+..++..|++.+.+ .++|+|+|. .+ . ..|..++ |.
T Consensus 2 ~~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 81 (181)
T 1a3c_A 2 NQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTS 81 (181)
T ss_dssp -CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------
T ss_pred CcccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCc
Confidence 3455677888888888888777643 256777721 01 1 1122111 12
Q ss_pred cc-eeeec---CcccCCCEEEEEeccccccHHHHHHHHHHHHcC-CEEEEEEEEEEcc
Q 027972 146 DV-MEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 198 (216)
Q Consensus 146 ~~-l~i~~---~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~G-a~vv~vavlie~~ 198 (216)
.. ..+.. ....+|++||||||++|||+|+.+++++|+++| ++.+.++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 82 NDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp CCCCEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cceeeecccccCcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 20 11111 122589999999999999999999999999997 9999999999876
No 31
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.19 E-value=6.7e-11 Score=99.01 Aligned_cols=100 Identities=18% Similarity=0.290 Sum_probs=72.0
Q ss_pred echhhhcCHHHHHHHHHHHHHHhcC---CCccEEEee----------------------EEE-Eeeeccc-Cccceeeec
Q 027972 100 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGE----------------------VIS-EEYSLEY-GKDVMEMHV 152 (216)
Q Consensus 100 Dit~Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~----------------------~ia-~~y~~ey-G~~~l~i~~ 152 (216)
|+..++.+++.+...+..|++.+.+ .+.|+|+|. .+. ..|..+. .++.+++..
T Consensus 31 ~~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~~~~~~~~~ 110 (205)
T 1yfz_A 31 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKSSGIVKIIK 110 (205)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHHHHHHCCEEEEE
T ss_pred ccceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCCccccceEEEec
Confidence 4556788899999888888887753 157888831 111 2222111 112233322
Q ss_pred C--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 153 G--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 153 ~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
. ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 111 ~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 111 DHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp CCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 2 2368999999999999999999999999999999999999999875
No 32
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.14 E-value=9.6e-11 Score=99.03 Aligned_cols=102 Identities=13% Similarity=0.208 Sum_probs=70.9
Q ss_pred EEechhhhcCHHHHHHHHHHHHHHhcC---------CCccEEEee-------------EE-------EEeee--cccC--
Q 027972 98 FQDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGE-------------VI-------SEEYS--LEYG-- 144 (216)
Q Consensus 98 f~Dit~Ll~dP~~~~~l~~~lae~~~~---------~~iDvVvG~-------------~i-------a~~y~--~eyG-- 144 (216)
+.|++.++.+++.+...+..|++.+.+ .+.++|+|. .+ ...+- ..|+
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~ 99 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG 99 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCc
Confidence 457888899999999888888776542 346778732 11 01111 1232
Q ss_pred ---ccceeeecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 145 ---KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 145 ---~~~l~i~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
++.+++..+ ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 100 ~~~~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 100 VETSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp --------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccCCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 112333222 2258999999999999999999999999999999999999999875
No 33
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.12 E-value=2.8e-10 Score=94.38 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=64.4
Q ss_pred hhcCHHHHHHHHHHHHHHhcC---CCccEEEee-------------------E---EE-Eeeeccc-CccceeeecC--c
Q 027972 104 LLLDTKAFRDTIDLFVERYKD---KNISVVAGE-------------------V---IS-EEYSLEY-GKDVMEMHVG--A 154 (216)
Q Consensus 104 Ll~dP~~~~~l~~~lae~~~~---~~iDvVvG~-------------------~---ia-~~y~~ey-G~~~l~i~~~--~ 154 (216)
++.+++.++..++.|++.+.+ .+.++|+|+ . +. ..|..+. ..+.+++..+ .
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~~~~~v~i~~~~~~ 91 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFKSSGEVELLKDLRL 91 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------CEEECCCS
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCccccCcEEEEecCCC
Confidence 567777777777777766543 146777732 1 11 1232111 1223443322 2
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
..+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 92 ~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 92 PIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 358999999999999999999999999999999999999999875
No 34
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.08 E-value=2.4e-10 Score=91.67 Aligned_cols=90 Identities=17% Similarity=0.257 Sum_probs=64.2
Q ss_pred hhcCHHHHHHHHHHHHHHhcC-CCccEEEee---------------------EEE-EeeecccCccceeeecCcccCCCE
Q 027972 104 LLLDTKAFRDTIDLFVERYKD-KNISVVAGE---------------------VIS-EEYSLEYGKDVMEMHVGAVQAGER 160 (216)
Q Consensus 104 Ll~dP~~~~~l~~~lae~~~~-~~iDvVvG~---------------------~ia-~~y~~eyG~~~l~i~~~~i~~G~r 160 (216)
++.+++.++..+..|++.+.+ .+.|+|+|+ .+. .+|.. ++.+.+.+..+...+|++
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~-~~~~~~~~~~~~~~~gk~ 83 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDH-DNQRELKVLKRAEGDGEG 83 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC---------CEEEECCSSCCTT
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecC-cccceEEEecCCCCCcCE
Confidence 567889999999999988875 456777732 111 33422 334445555444468999
Q ss_pred EEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 161 ALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 161 VLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
||||||+++||+|+.++++.|++ ++++++++++.
T Consensus 84 VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~ 117 (152)
T 1nul_A 84 FIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPA 117 (152)
T ss_dssp EEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGG
T ss_pred EEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCC
Confidence 99999999999999999999986 78999999873
No 35
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.05 E-value=7e-10 Score=94.62 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=68.9
Q ss_pred echhhhcCHHHHHHHHHHHHHHhc----CCC-----c-cEEEee-------------EE-------EEeee--cccC---
Q 027972 100 DITTLLLDTKAFRDTIDLFVERYK----DKN-----I-SVVAGE-------------VI-------SEEYS--LEYG--- 144 (216)
Q Consensus 100 Dit~Ll~dP~~~~~l~~~lae~~~----~~~-----i-DvVvG~-------------~i-------a~~y~--~eyG--- 144 (216)
|++.++.+++.+...++.|++.+. +.. + ++|+|. .+ ...+- ..|+
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 577788888888888888876654 222 2 677732 01 00000 1232
Q ss_pred --ccceeeecC--cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 145 --KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 145 --~~~l~i~~~--~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
++.+.+..+ ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 86 ~~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 86 TSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp -----CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred ccCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 122333222 2258999999999999999999999999999999999999999875
No 36
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.04 E-value=1.2e-09 Score=90.17 Aligned_cols=96 Identities=15% Similarity=0.273 Sum_probs=64.7
Q ss_pred hhcCHHHHHHHHHHHHHHhcC-C--Cc-cEEEee-------------------E---EE-Eeeecc-cCccceeeecC--
Q 027972 104 LLLDTKAFRDTIDLFVERYKD-K--NI-SVVAGE-------------------V---IS-EEYSLE-YGKDVMEMHVG-- 153 (216)
Q Consensus 104 Ll~dP~~~~~l~~~lae~~~~-~--~i-DvVvG~-------------------~---ia-~~y~~e-yG~~~l~i~~~-- 153 (216)
++.+++.++..++.|++.+.+ . .. ++|+|. . +. ..|..+ .+.+.+++..+
T Consensus 7 ~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~~~~~~v~i~~~~~ 86 (177)
T 3ohp_A 7 VMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSMQSSRDVRILKDLD 86 (177)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC--------CCCCEEECCS
T ss_pred EeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCCccCCcEEEecCCC
Confidence 556777777777777766542 1 23 677732 1 11 123221 12233444333
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 87 ~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 87 DDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPT 132 (177)
T ss_dssp SCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCc
Confidence 2258999999999999999999999999999999999999999874
No 37
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.02 E-value=9.9e-10 Score=89.82 Aligned_cols=43 Identities=28% Similarity=0.395 Sum_probs=41.1
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcC-CEEEEEEEEEEcc
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 198 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~G-a~vv~vavlie~~ 198 (216)
.+|++||||||++|||+|+.++++.|+++| ++.+.++++++++
T Consensus 94 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 94 LTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred CCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 589999999999999999999999999999 8999999999886
No 38
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.00 E-value=4.2e-10 Score=99.41 Aligned_cols=60 Identities=27% Similarity=0.409 Sum_probs=52.2
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccCCCCceec
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 214 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~~pv~sL 214 (216)
..+|++||||||+++||+|+.++++.|++.|++.+.++++|.....++.++|.+.++..+
T Consensus 202 ~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~v 261 (284)
T 1u9y_A 202 DAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV 261 (284)
T ss_dssp CCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred cCCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEE
Confidence 368999999999999999999999999999999999999999877778888865444443
No 39
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.98 E-value=5.6e-09 Score=89.00 Aligned_cols=45 Identities=27% Similarity=0.304 Sum_probs=40.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHH--------cCC---------EEEEEEEEEEccC
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLER--------VGV---------HVVECACVIELPE 199 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~--------~Ga---------~vv~vavlie~~~ 199 (216)
..+|++||||||+++||+|+.+++++|++ .|+ +.+.++++++++.
T Consensus 100 ~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 100 DLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred cCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 36899999999999999999999999997 787 4789999999874
No 40
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.94 E-value=2.3e-09 Score=96.86 Aligned_cols=56 Identities=21% Similarity=0.193 Sum_probs=49.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccCCCCc
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL 211 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~~pv 211 (216)
.+|++|+||||+++||+|+.++++.|++.|++.+.++|.|+....++.++|.+.++
T Consensus 211 v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i 266 (326)
T 3s5j_B 211 VKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACF 266 (326)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCC
T ss_pred CCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCC
Confidence 58999999999999999999999999999999999999999876677888764333
No 41
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.83 E-value=5.9e-09 Score=93.93 Aligned_cols=57 Identities=26% Similarity=0.346 Sum_probs=50.0
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccCCCCce
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF 212 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~~pv~ 212 (216)
.+|++|+||||+++||+|+.++++.|++.|++.+.++|.|.....++.++|.+.++.
T Consensus 214 v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~ 270 (319)
T 3dah_A 214 VEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALD 270 (319)
T ss_dssp -CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCS
T ss_pred CCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCC
Confidence 589999999999999999999999999999999999999998766788888644443
No 42
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.80 E-value=1.1e-08 Score=94.04 Aligned_cols=53 Identities=25% Similarity=0.288 Sum_probs=48.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccCC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 208 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~ 208 (216)
.+|++||||||+++||+|+.++++.|++.|++.+.++|+|.....++.++|.+
T Consensus 270 v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~ 322 (379)
T 2ji4_A 270 VGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEE 322 (379)
T ss_dssp CTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHH
T ss_pred CCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHh
Confidence 68999999999999999999999999999999999999999776677888753
No 43
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.79 E-value=6e-09 Score=87.37 Aligned_cols=43 Identities=23% Similarity=0.415 Sum_probs=41.3
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcC-CEEEEEEEEEEcc
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 198 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~G-a~vv~vavlie~~ 198 (216)
.+|++|||||||++||+|+.+++++|+++| ++.+.++++++++
T Consensus 110 ~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 110 IDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp STTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred CCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 589999999999999999999999999999 9999999999985
No 44
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=98.74 E-value=5.9e-09 Score=93.47 Aligned_cols=57 Identities=25% Similarity=0.406 Sum_probs=48.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccCCCCce
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF 212 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~~~pv~ 212 (216)
.+|++||||||++|||+|+.++++.|+++|++.+.++|.|.....++.++|.+.++.
T Consensus 215 v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~ 271 (317)
T 1dku_A 215 IEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIK 271 (317)
T ss_dssp CTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEE
T ss_pred CCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCC
Confidence 589999999999999999999999999999999999998877665677777543333
No 45
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.73 E-value=6.9e-09 Score=86.78 Aligned_cols=49 Identities=37% Similarity=0.518 Sum_probs=43.6
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCccccccc
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 206 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L 206 (216)
.+|++||||||+++||+|+.++++.|++.|++.+.+++.+..+. +.++|
T Consensus 118 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~--~~~~l 166 (208)
T 1wd5_A 118 RKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPE--AVERL 166 (208)
T ss_dssp CTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHH--HHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHH--HHHHh
Confidence 58999999999999999999999999999999999999888753 55554
No 46
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.65 E-value=1.5e-07 Score=78.08 Aligned_cols=44 Identities=32% Similarity=0.431 Sum_probs=41.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
..|++|||||||+.||.|+.++.+.|.+.|++.+.++++++++.
T Consensus 93 i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~ 136 (181)
T 3acd_A 93 IHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCc
Confidence 68999999999999999999999999999999999999999764
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=98.47 E-value=2.5e-07 Score=87.29 Aligned_cols=40 Identities=25% Similarity=0.315 Sum_probs=37.9
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 195 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavli 195 (216)
.+|++||||||+++||+|+.+++++|+++||+.|.+++++
T Consensus 357 v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 357 FRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp TTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred CCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 5899999999999999999999999999999999888875
No 48
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.40 E-value=1.1e-07 Score=80.39 Aligned_cols=50 Identities=34% Similarity=0.584 Sum_probs=44.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~ 207 (216)
.+|++|+||||+++||+|+.++++.|++.|++.+.++|++..++ |.+++.
T Consensus 122 i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~~lv~~~~--g~~~l~ 171 (209)
T 1i5e_A 122 VEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAAPE--GVKAVE 171 (209)
T ss_dssp TTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEECHH--HHHHHH
T ss_pred cCCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEEEEEECHH--HHHHHH
Confidence 47899999999999999999999999999999999999987764 777764
No 49
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.30 E-value=3.8e-07 Score=77.50 Aligned_cols=50 Identities=34% Similarity=0.516 Sum_probs=45.7
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~ 207 (216)
.+|++|+||||+++||+|+.++++.|++.|++.+.++|++..++ |.++|.
T Consensus 119 i~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~~--g~~~l~ 168 (208)
T 2e55_A 119 LKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAAPE--GLKRIE 168 (208)
T ss_dssp CBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEEEECHH--HHHHHH
T ss_pred CCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEECHH--HHHHHH
Confidence 47999999999999999999999999999999999999998875 777764
No 50
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.26 E-value=5.6e-07 Score=76.49 Aligned_cols=50 Identities=36% Similarity=0.578 Sum_probs=45.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~ 207 (216)
..|++|+||||+++||+|+.++++.|++.|++.+.++|++..++ |.++|.
T Consensus 121 i~~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~p~--g~~~l~ 170 (208)
T 2ehj_A 121 IDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPE--GIAALE 170 (208)
T ss_dssp GGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEEEECHH--HHHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHH--HHHHHH
Confidence 46899999999999999999999999999999999999998875 777764
No 51
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=98.25 E-value=8.1e-07 Score=82.68 Aligned_cols=39 Identities=26% Similarity=0.427 Sum_probs=37.0
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 194 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavl 194 (216)
.+|++||||||++|||+|+.+++++|+++||+.|.++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l 374 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKIS 374 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEe
Confidence 589999999999999999999999999999999998885
No 52
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.24 E-value=1.5e-06 Score=74.47 Aligned_cols=50 Identities=26% Similarity=0.454 Sum_probs=45.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~ 207 (216)
.+|+.|+||||+++||+|+.++++.|++.|++.+.++|++..++ |.++|.
T Consensus 134 i~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~lv~~~~--g~~~l~ 183 (221)
T 1o5o_A 134 NDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAPE--GVEAVE 183 (221)
T ss_dssp CTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEECHH--HHHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHH--HHHHHH
Confidence 57899999999999999999999999999999999999988875 777764
No 53
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.24 E-value=1.5e-06 Score=73.81 Aligned_cols=50 Identities=38% Similarity=0.616 Sum_probs=45.3
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~~~g~e~L~ 207 (216)
.+|++|+||||+++||+|+.++++.|++.|++.+.++|++..++ |.++|.
T Consensus 121 i~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~~--g~~~l~ 170 (208)
T 1v9s_A 121 IAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAILAAPE--GLERIA 170 (208)
T ss_dssp GGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEECHH--HHHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHH--HHHHHH
Confidence 46889999999999999999999999999999999999998875 777764
No 54
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.08 E-value=1.3e-06 Score=75.89 Aligned_cols=50 Identities=28% Similarity=0.471 Sum_probs=44.7
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCC--EEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGV--HVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga--~vv~vavlie~~~~~g~e~L~ 207 (216)
..|+.|+||||+++||+|+.++++.|++.|+ +-+.++|++..++ |.++|.
T Consensus 154 i~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~~~lvaap~--g~~~l~ 205 (243)
T 1bd3_D 154 IRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQ--GIERVF 205 (243)
T ss_dssp GGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEEEECHH--HHHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEEEEEEeCHH--HHHHHH
Confidence 4689999999999999999999999999999 8888889988775 777764
No 55
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=97.95 E-value=2.6e-06 Score=72.90 Aligned_cols=50 Identities=28% Similarity=0.407 Sum_probs=43.4
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCC--EEEEEEEEEEccCcccccccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGV--HVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga--~vv~vavlie~~~~~g~e~L~ 207 (216)
..|+.|+||||+++||+|+.++++.|++.|+ +-+.++|++..++ |.+++.
T Consensus 127 i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~e--gl~~l~ 178 (217)
T 3dmp_A 127 LEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPE--GVQVFQ 178 (217)
T ss_dssp CTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHH--HHHHHH
T ss_pred CCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHH--HHHHHH
Confidence 4689999999999999999999999999999 7788888887764 766654
No 56
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=97.92 E-value=4.6e-06 Score=71.73 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=35.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEccC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 199 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie~~~ 199 (216)
.+|++||||||+++||+|+.++++.|++ +.++++++++.
T Consensus 116 v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 116 KEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp HHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred CCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 5899999999999999999999999987 67888998874
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=97.79 E-value=7.9e-06 Score=69.77 Aligned_cols=49 Identities=14% Similarity=0.227 Sum_probs=42.4
Q ss_pred cCCC--EEEEEeccccccHHHHHHHHHHHHcCC-EEEEEEEEEEccCcccccccC
Q 027972 156 QAGE--RALIVDDLVATGGTLSAAIRLLERVGV-HVVECACVIELPELKGRERLG 207 (216)
Q Consensus 156 ~~G~--rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~vavlie~~~~~g~e~L~ 207 (216)
..++ +|+||||+++||+|+.++++.|++ |+ +.+.++|++..++ |.++|.
T Consensus 129 i~~~~~~VilvDp~laTG~T~~~ai~~L~~-G~p~~I~~~~~vaa~~--gl~~l~ 180 (216)
T 1xtt_A 129 IRAKVDNVIIADPMIATASTMLKVLEEVVK-ANPKRIYIVSIISSEY--GVNKIL 180 (216)
T ss_dssp CCTTTCEEEEECSEESSSHHHHHHHHHHGG-GCCSEEEEECSEEEHH--HHHHHH
T ss_pred ccCCcceEEEEcCCccchHHHHHHHHHHHh-CCCCeEEEEEEecCHH--HHHHHH
Confidence 3577 999999999999999999999999 99 8888888887764 776664
No 58
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=51.36 E-value=16 Score=27.69 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=20.1
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
.++-|||||||=-+.- ....+.|++.|..++
T Consensus 10 ~k~~rILiVDD~~~~r---~~l~~~L~~~G~~~v 40 (134)
T 3to5_A 10 NKNMKILIVDDFSTMR---RIVKNLLRDLGFNNT 40 (134)
T ss_dssp CTTCCEEEECSCHHHH---HHHHHHHHHTTCCCE
T ss_pred CCCCEEEEEeCCHHHH---HHHHHHHHHcCCcEE
Confidence 3566899999966433 334456677787643
No 59
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=43.93 E-value=31 Score=24.18 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=31.7
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
+..|++++=|++.-.+|-|...+.++|++.|-++.
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 57899999999999999999999999998887753
No 60
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=42.25 E-value=45 Score=23.09 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=20.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
++.+||||||=-.. .....+.+++.|..+.
T Consensus 6 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~v~ 35 (130)
T 3eod_A 6 VGKQILIVEDEQVF---RSLLDSWFSSLGATTV 35 (130)
T ss_dssp TTCEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhCCceEE
Confidence 57799999986543 3444556677787654
No 61
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=42.17 E-value=44 Score=23.08 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=16.4
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 158 GERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 158 G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+.+||||||=-.. .....+.+++.|..+
T Consensus 2 ~~~ilivdd~~~~---~~~l~~~L~~~g~~v 29 (120)
T 3f6p_A 2 DKKILVVDDEKPI---ADILEFNLRKEGYEV 29 (120)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCeEEEEECCHHH---HHHHHHHHHhCCEEE
Confidence 3578888885433 333345556667654
No 62
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.90 E-value=46 Score=23.07 Aligned_cols=28 Identities=25% Similarity=0.335 Sum_probs=16.9
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 159 ERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 159 ~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
++||||||=-. ......+.+++.|..++
T Consensus 3 ~~ILivdd~~~---~~~~l~~~l~~~g~~v~ 30 (122)
T 3gl9_A 3 KKVLLVDDSAV---LRKIVSFNLKKEGYEVI 30 (122)
T ss_dssp CEEEEECSCHH---HHHHHHHHHHHTTCEEE
T ss_pred ceEEEEeCCHH---HHHHHHHHHHHCCcEEE
Confidence 57888888543 33334455666776653
No 63
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=37.86 E-value=50 Score=23.37 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=16.8
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+.+||||||=-.. .....+.|++.|..+
T Consensus 4 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~v 32 (140)
T 3h5i_A 4 KDKKILIVEDSKFQ---AKTIANILNKYGYTV 32 (140)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCcEEEEEeCCHHH---HHHHHHHHHHcCCEE
Confidence 35689999985533 334445555666654
No 64
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=36.63 E-value=52 Score=28.02 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=27.0
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|++|+.
T Consensus 173 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~Vi~ 205 (348)
T 3two_A 173 KVTKGTKVGVA----GFGGLGSMAVKYAVAMGAEVSV 205 (348)
T ss_dssp TCCTTCEEEEE----SCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEE----CCcHHHHHHHHHHHHCCCeEEE
Confidence 45789999996 3488889999999999998654
No 65
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=36.44 E-value=57 Score=28.06 Aligned_cols=34 Identities=24% Similarity=0.503 Sum_probs=28.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||+ .+|+.=..++++++..|++|+.+
T Consensus 186 ~~~~g~~VlV~----G~G~vG~~a~qla~~~Ga~Vi~~ 219 (363)
T 3uog_A 186 HLRAGDRVVVQ----GTGGVALFGLQIAKATGAEVIVT 219 (363)
T ss_dssp CCCTTCEEEEE----SSBHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCEEEEE
Confidence 45789999987 36888899999999999987543
No 66
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=35.35 E-value=60 Score=22.38 Aligned_cols=29 Identities=38% Similarity=0.416 Sum_probs=15.7
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+.+||||||=-... ....++|++.|..+
T Consensus 5 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v 33 (132)
T 3lte_A 5 QSKRILVVDDDQAMA---AAIERVLKRDHWQV 33 (132)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CCccEEEEECCHHHH---HHHHHHHHHCCcEE
Confidence 456888888854333 33344455566654
No 67
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=35.32 E-value=73 Score=21.49 Aligned_cols=28 Identities=36% Similarity=0.519 Sum_probs=15.7
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 158 GERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 158 G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+.+|+||||=-.....+ .+.++..|..+
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMML---KDIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CceEEEEcCcHHHHHHH---HHHHhhcCcEE
Confidence 35788888855433333 34445566664
No 68
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=34.57 E-value=62 Score=28.05 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=26.3
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|++|+.
T Consensus 191 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~Vi~ 223 (369)
T 1uuf_A 191 QAGPGKKVGVV----GIGGLGHMGIKLAHAMGAHVVA 223 (369)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHCCCEEEE
Confidence 34689999997 3477888899999999998643
No 69
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=33.12 E-value=56 Score=27.64 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=27.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||. ..|+.=..++++++..|++|+.+
T Consensus 163 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~Vi~~ 196 (340)
T 3s2e_A 163 DTRPGQWVVIS----GIGGLGHVAVQYARAMGLRVAAV 196 (340)
T ss_dssp TCCTTSEEEEE----CCSTTHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHCCCeEEEE
Confidence 45789999985 34778888999999999987554
No 70
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.87 E-value=47 Score=23.85 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=32.8
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcC---CEEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVG---VHVVECA 192 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~G---a~vv~va 192 (216)
.+.+|++++=|++.-.++-|...++++|+..+ ...+.+.
T Consensus 59 ~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~ 100 (109)
T 1wi4_A 59 RLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIA 100 (109)
T ss_dssp SCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEE
Confidence 37899999999999999999999999999987 5544433
No 71
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=31.56 E-value=77 Score=26.99 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=26.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|++|+.
T Consensus 165 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~Vi~ 197 (352)
T 1e3j_A 165 GVQLGTTVLVI----GAGPIGLVSVLAAKAYGAFVVC 197 (352)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCEEEE
Confidence 45689999996 3488888899999999998543
No 72
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=30.60 E-value=80 Score=27.20 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=26.4
Q ss_pred cc-CCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 155 VQ-AGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 155 i~-~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
+. +|++|||+ ..|+.=..++++++..|++|+.
T Consensus 184 ~~~~g~~VlV~----GaG~vG~~~~q~a~~~Ga~Vi~ 216 (366)
T 1yqd_A 184 LDEPGKHIGIV----GLGGLGHVAVKFAKAFGSKVTV 216 (366)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEE----CCCHHHHHHHHHHHHCCCEEEE
Confidence 45 89999997 3588889999999999997644
No 73
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=30.47 E-value=63 Score=26.83 Aligned_cols=33 Identities=27% Similarity=0.527 Sum_probs=27.3
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
+.+|++|||+ -++|+.=..++++++..|++|+.
T Consensus 123 ~~~g~~vlV~---Ga~G~vG~~~~~~a~~~Ga~Vi~ 155 (302)
T 1iz0_A 123 ARPGEKVLVQ---AAAGALGTAAVQVARAMGLRVLA 155 (302)
T ss_dssp CCTTCEEEES---STTBHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEE---CCCcHHHHHHHHHHHHCCCEEEE
Confidence 6789999885 35788889999999999997654
No 74
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=30.27 E-value=74 Score=27.25 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=26.7
Q ss_pred ccc-CCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQ-AGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~-~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+. +|++|||+ ..|+.=..++++++..|++|+.
T Consensus 176 ~~~~~g~~VlV~----GaG~vG~~a~qlak~~Ga~Vi~ 209 (357)
T 2cf5_A 176 GLKQPGLRGGIL----GLGGVGHMGVKIAKAMGHHVTV 209 (357)
T ss_dssp STTSTTCEEEEE----CCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCEEEEE----CCCHHHHHHHHHHHHCCCeEEE
Confidence 345 89999997 3588889999999999997643
No 75
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=30.19 E-value=70 Score=27.35 Aligned_cols=36 Identities=17% Similarity=0.380 Sum_probs=28.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA 192 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~va 192 (216)
.+.+|++|||+ -++|+.=..++++++..|++++.++
T Consensus 164 ~~~~g~~VlV~---Ga~G~vG~~aiqlak~~Ga~vi~~~ 199 (357)
T 1zsy_A 164 QLQPGDSVIQN---ASNSGVGQAVIQIAAALGLRTINVV 199 (357)
T ss_dssp CCCTTCEEEES---STTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCCEEEEe---CCcCHHHHHHHHHHHHcCCEEEEEe
Confidence 45789999984 3568888999999999999876544
No 76
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=29.78 E-value=48 Score=24.53 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=32.9
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++++=|++.-..+-|...++++++..+...+..
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 112 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTI 112 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 57899999999999999999999999999987765443
No 77
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=29.78 E-value=82 Score=22.80 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=19.7
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 158 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 158 G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
..+||||||=- .......++|++.|..++
T Consensus 36 ~~~Ilivdd~~---~~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 36 PFNVLIVDDSV---FTVKQLTQIFTSEGFNII 64 (157)
T ss_dssp ECEEEEECSCH---HHHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEeCCH---HHHHHHHHHHHhCCCeEE
Confidence 35899999955 344455566677787765
No 78
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=29.75 E-value=85 Score=26.79 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=26.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~v 191 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.+
T Consensus 168 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~~ 202 (356)
T 1pl8_A 168 GVTLGHKVLVC----GAGPIGMVTLLVAKAMGAAQVVVT 202 (356)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEEE
Confidence 35689999986 348888889999999999 66443
No 79
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=29.69 E-value=72 Score=23.22 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=35.8
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 196 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~vavlie 196 (216)
+.+..|+.++=|++.-..|-|-.+++++|++.-....-.+.+++
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 35689999999999999999999999999997554444555554
No 80
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=29.67 E-value=74 Score=22.98 Aligned_cols=29 Identities=24% Similarity=0.314 Sum_probs=17.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+..+||||||=-.. .....+.|++.|..+
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~v 34 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ---AEHLKHILEETGYQT 34 (154)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHTTTCEE
T ss_pred CCCcEEEEeCCHHH---HHHHHHHHHHCCCEE
Confidence 45689999885533 334445555666654
No 81
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=29.51 E-value=68 Score=21.88 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+..|+.++=|++.-.+|.|...+.++++..+..+
T Consensus 39 ~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 39 NLHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp CCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 37899999999999999999999999999998764
No 82
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=29.46 E-value=79 Score=27.15 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=26.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 189 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~~Vi~ 222 (374)
T 1cdo_A 189 KVEPGSTCAVF----GLGAVGLAAVMGCHSAGAKRIIA 222 (374)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEE
Confidence 45789999997 358888899999999999 5544
No 83
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=29.25 E-value=98 Score=21.54 Aligned_cols=29 Identities=24% Similarity=0.215 Sum_probs=17.4
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+..+||||||=-.. .....+.|++.|..+
T Consensus 5 ~~~~iLivdd~~~~---~~~l~~~l~~~g~~v 33 (140)
T 3grc_A 5 PRPRILICEDDPDI---ARLLNLMLEKGGFDS 33 (140)
T ss_dssp CCSEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCCCEEEEcCCHHH---HHHHHHHHHHCCCeE
Confidence 34688888885533 334445556667654
No 84
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.77 E-value=64 Score=23.09 Aligned_cols=29 Identities=38% Similarity=0.445 Sum_probs=13.8
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
++.+||||||=-.. .....++|++.|..+
T Consensus 13 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~v 41 (143)
T 3m6m_D 13 RSMRMLVADDHEAN---RMVLQRLLEKAGHKV 41 (143)
T ss_dssp --CEEEEECSSHHH---HHHHHHHHHC--CEE
T ss_pred ccceEEEEeCCHHH---HHHHHHHHHHcCCeE
Confidence 45678888885433 233334445555544
No 85
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=28.74 E-value=83 Score=27.02 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=26.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 188 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~~Vi~ 221 (374)
T 2jhf_A 188 KVTQGSTCAVF----GLGGVGLSVIMGCKAAGAARIIG 221 (374)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 45789999997 358888899999999999 5544
No 86
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=28.48 E-value=84 Score=27.17 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=26.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 179 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~ 212 (370)
T 4ej6_A 179 GIKAGSTVAIL----GGGVIGLLTVQLARLAGATTVIL 212 (370)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEE
Confidence 35689999997 348888999999999999 5543
No 87
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=28.47 E-value=93 Score=23.81 Aligned_cols=34 Identities=35% Similarity=0.541 Sum_probs=23.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+ -++|+.=.+++++++..|++|+.
T Consensus 35 ~~~~g~~vlV~---Ga~ggiG~~~~~~~~~~G~~V~~ 68 (198)
T 1pqw_A 35 RLSPGERVLIH---SATGGVGMAAVSIAKMIGARIYT 68 (198)
T ss_dssp CCCTTCEEEET---TTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEEEe---eCCChHHHHHHHHHHHcCCEEEE
Confidence 34577777753 24677777888888888887643
No 88
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=28.46 E-value=77 Score=27.17 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=26.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 187 ~~~~g~~VlV~----GaG~vG~~avqla~~~Ga~~Vi~ 220 (373)
T 2fzw_A 187 KLEPGSVCAVF----GLGGVGLAVIMGCKVAGASRIIG 220 (373)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 45789999997 358888899999999999 5543
No 89
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=28.13 E-value=86 Score=26.94 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=26.7
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 192 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~ 225 (376)
T 1e3i_A 192 KVTPGSTCAVF----GLGCVGLSAIIGCKIAGASRIIA 225 (376)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 45789999996 358888899999999999 5543
No 90
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=27.81 E-value=91 Score=26.45 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+- ++|+.=..++++++..|++|+.
T Consensus 166 ~~~~g~~vlV~G---a~ggiG~~~~~~a~~~Ga~V~~ 199 (347)
T 2hcy_A 166 NLMAGHWVAISG---AAGGLGSLAVQYAKAMGYRVLG 199 (347)
T ss_dssp TCCTTCEEEEET---TTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEC---CCchHHHHHHHHHHHCCCcEEE
Confidence 356899998864 5788888999999999997654
No 91
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=27.28 E-value=83 Score=27.01 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=26.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++.+..|+ +|+.
T Consensus 188 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~ 221 (373)
T 1p0f_A 188 KVTPGSTCAVF----GLGGVGFSAIVGCKAAGASRIIG 221 (373)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 45789999997 358888899999999999 5543
No 92
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=26.81 E-value=1.2e+02 Score=21.29 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=31.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
.+.+|++++=|++.-.++.|...+.++++..+...+
T Consensus 62 ~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v 97 (108)
T 2d92_A 62 GLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLV 97 (108)
T ss_dssp CCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 378999999999999999999999999999765543
No 93
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.54 E-value=82 Score=21.54 Aligned_cols=26 Identities=38% Similarity=0.528 Sum_probs=13.1
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCE
Q 027972 159 ERALIVDDLVATGGTLSAAIRLLERVGVH 187 (216)
Q Consensus 159 ~rVLIVDDVitTGgTl~aai~lL~~~Ga~ 187 (216)
.+||||||=-.. .....+.|++.|..
T Consensus 4 ~~ilivdd~~~~---~~~l~~~L~~~g~~ 29 (127)
T 3i42_A 4 QQALIVEDYQAA---AETFKELLEMLGFQ 29 (127)
T ss_dssp EEEEEECSCHHH---HHHHHHHHHHTTEE
T ss_pred ceEEEEcCCHHH---HHHHHHHHHHcCCC
Confidence 467777774432 23333444455543
No 94
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=26.46 E-value=99 Score=26.64 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=27.7
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+|++|||+- ++|+.-..++++.+..|++|+.+
T Consensus 163 ~~g~~VlV~G---a~G~vG~~a~qla~~~Ga~Vi~~ 195 (371)
T 3gqv_A 163 SKPVYVLVYG---GSTATATVTMQMLRLSGYIPIAT 195 (371)
T ss_dssp SSCCEEEEES---TTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEEC---CCcHHHHHHHHHHHHCCCEEEEE
Confidence 6899999863 66888899999999999987654
No 95
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.12 E-value=84 Score=26.43 Aligned_cols=36 Identities=31% Similarity=0.326 Sum_probs=28.3
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||. -++|+.=..++++++..|++|+.+
T Consensus 145 ~~~~~g~~vlI~---Ga~g~iG~~~~~~a~~~Ga~Vi~~ 180 (336)
T 4b7c_A 145 GQPKNGETVVIS---GAAGAVGSVAGQIARLKGCRVVGI 180 (336)
T ss_dssp TCCCTTCEEEES---STTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEE---CCCCHHHHHHHHHHHHCCCEEEEE
Confidence 356789999876 356888899999999999977543
No 96
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=26.06 E-value=90 Score=26.75 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=26.9
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCE-EEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH-VVE 190 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~-vv~ 190 (216)
..+.+|++|||+ ..|+.=..++++++..|+. |+.
T Consensus 186 ~~~~~g~~VlV~----GaG~vG~~a~qlak~~Ga~~Vi~ 220 (371)
T 1f8f_A 186 LKVTPASSFVTW----GAGAVGLSALLAAKVCGASIIIA 220 (371)
T ss_dssp TCCCTTCEEEEE----SCSHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 356789999998 3588788899999999994 544
No 97
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=25.45 E-value=84 Score=21.25 Aligned_cols=35 Identities=6% Similarity=0.161 Sum_probs=31.1
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
+.+|+.++=||+.-.++-+...+.++++..|..++
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 81 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 81 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 68999999999999999888999999999887753
No 98
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=25.40 E-value=1e+02 Score=26.94 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=27.2
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~v 191 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.+
T Consensus 210 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~~ 244 (404)
T 3ip1_A 210 GIRPGDNVVIL----GGGPIGLAAVAILKHAGASKVILS 244 (404)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEEE
Confidence 45789999997 348888999999999999 66443
No 99
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=25.26 E-value=1e+02 Score=26.82 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=25.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 182 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~ 215 (398)
T 2dph_A 182 GVKPGSHVYIA----GAGPVGRCAAAGARLLGAACVIV 215 (398)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEE
Confidence 45689999986 347777888999999998 6644
No 100
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=25.15 E-value=87 Score=26.62 Aligned_cols=35 Identities=34% Similarity=0.618 Sum_probs=27.9
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||.- ++|+.=..++++++..|++|+.+
T Consensus 156 ~~~~g~~VlV~G---asg~iG~~~~~~a~~~Ga~Vi~~ 190 (342)
T 4eye_A 156 QLRAGETVLVLG---AAGGIGTAAIQIAKGMGAKVIAV 190 (342)
T ss_dssp CCCTTCEEEESS---TTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEEC---CCCHHHHHHHHHHHHcCCEEEEE
Confidence 457899998763 46888899999999999987543
No 101
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=24.98 E-value=99 Score=20.96 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=30.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV 186 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga 186 (216)
.+.+|+.++=|++.-.+|.+...+.++++..+.
T Consensus 46 ~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 46 LIHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 378999999999999999999999999999875
No 102
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=24.44 E-value=90 Score=26.27 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+ -++|+.=..++++++..|++|+.
T Consensus 152 ~~~~g~~vlI~---Ga~g~iG~~~~~~a~~~G~~V~~ 185 (345)
T 2j3h_A 152 SPKEGETVYVS---AASGAVGQLVGQLAKMMGCYVVG 185 (345)
T ss_dssp CCCTTCEEEES---STTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEE---CCCcHHHHHHHHHHHHCCCEEEE
Confidence 45689999885 35788889999999999997644
No 103
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=24.21 E-value=1.3e+02 Score=25.29 Aligned_cols=34 Identities=29% Similarity=0.519 Sum_probs=24.2
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHc-CCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERV-GVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~-Ga~vv~v 191 (216)
.+.+|++|||+ ..|+....++++++.+ |++|+.+
T Consensus 160 ~~~~g~~VlV~----GaG~~g~~a~~~a~~~~g~~Vi~~ 194 (348)
T 4eez_A 160 GVKPGDWQVIF----GAGGLGNLAIQYAKNVFGAKVIAV 194 (348)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTSCCEEEEE
T ss_pred CCCCCCEEEEE----cCCCccHHHHHHHHHhCCCEEEEE
Confidence 34689999986 5577777788888876 5566443
No 104
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=24.04 E-value=85 Score=23.06 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=28.0
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHc
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERV 184 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~ 184 (216)
+..|+.++=||+.-.++-+...++++|+..
T Consensus 74 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 74 LRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp SCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 789999999999999999999999999987
No 105
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=23.96 E-value=1.1e+02 Score=20.53 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=30.4
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+.+|+.++=||+.-.++.+...+.++++..+..+
T Consensus 45 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 45 LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 6899999999999999988999999999887664
No 106
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=23.81 E-value=1.3e+02 Score=25.25 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||.- ++|+.=..++++++..|++|+.
T Consensus 142 ~~~~g~~vlV~G---a~ggiG~~~~~~~~~~G~~V~~ 175 (333)
T 1v3u_A 142 GVKGGETVLVSA---AAGAVGSVVGQIAKLKGCKVVG 175 (333)
T ss_dssp CCCSSCEEEEES---TTBHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEec---CCCcHHHHHHHHHHHCCCEEEE
Confidence 456899998863 5688889999999999998754
No 107
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=23.69 E-value=1.5e+02 Score=20.30 Aligned_cols=31 Identities=26% Similarity=0.416 Sum_probs=26.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH 187 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~ 187 (216)
.+.+++.|++.. .+|.....+...|++.|.+
T Consensus 52 ~l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~~ 82 (100)
T 3foj_A 52 YFNDNETYYIIC---KAGGRSAQVVQYLEQNGVN 82 (100)
T ss_dssp GSCTTSEEEEEC---SSSHHHHHHHHHHHTTTCE
T ss_pred hCCCCCcEEEEc---CCCchHHHHHHHHHHCCCC
Confidence 456788899987 6899999999999999983
No 108
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=23.69 E-value=89 Score=26.42 Aligned_cols=36 Identities=8% Similarity=0.052 Sum_probs=27.2
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||+ -++|+.=..++++++..|++|+.+
T Consensus 140 ~~~~~g~~VlV~---Ga~g~iG~~~~~~a~~~Ga~Vi~~ 175 (340)
T 3gms_A 140 LNLQRNDVLLVN---ACGSAIGHLFAQLSQILNFRLIAV 175 (340)
T ss_dssp SCCCTTCEEEES---STTSHHHHHHHHHHHHHTCEEEEE
T ss_pred cccCCCCEEEEe---CCccHHHHHHHHHHHHcCCEEEEE
Confidence 355789999875 345577788899999999987543
No 109
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=23.43 E-value=1.2e+02 Score=25.65 Aligned_cols=36 Identities=31% Similarity=0.372 Sum_probs=28.8
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||+ -++|+.=..++++++..|++|+.+
T Consensus 146 ~~~~~g~~VlV~---Ga~g~iG~~~~q~a~~~Ga~Vi~~ 181 (343)
T 3gaz_A 146 AQVQDGQTVLIQ---GGGGGVGHVAIQIALARGARVFAT 181 (343)
T ss_dssp TCCCTTCEEEEE---TTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEe---cCCCHHHHHHHHHHHHCCCEEEEE
Confidence 345789999986 347888899999999999987654
No 110
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.36 E-value=95 Score=22.12 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=15.9
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVG 185 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~G 185 (216)
.++.+||||||=-. ......++|++.|
T Consensus 13 ~~~~~iLivdd~~~---~~~~l~~~L~~~~ 39 (152)
T 3eul_A 13 PEKVRVVVGDDHPL---FREGVVRALSLSG 39 (152)
T ss_dssp -CCEEEEEECSSHH---HHHHHHHHHHHHS
T ss_pred CceEEEEEEcCCHH---HHHHHHHHHhhCC
Confidence 46778999998543 2333444455555
No 111
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=23.34 E-value=1.1e+02 Score=25.55 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=27.6
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||. -++|+.=..++++++..|++|+.+
T Consensus 137 ~~~~g~~VlV~---Ga~g~iG~~~~~~a~~~Ga~Vi~~ 171 (325)
T 3jyn_A 137 QVKPGEIILFH---AAAGGVGSLACQWAKALGAKLIGT 171 (325)
T ss_dssp CCCTTCEEEES---STTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCEEEEE---cCCcHHHHHHHHHHHHCCCEEEEE
Confidence 45789999874 347888899999999999987544
No 112
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=23.22 E-value=95 Score=26.45 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=27.3
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCE-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH-VVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~-vv~v 191 (216)
.+.+|++|||. ..|+.=..++++.+..|++ |+.+
T Consensus 176 ~~~~g~~VlV~----GaG~vG~~aiqlak~~Ga~~Vi~~ 210 (363)
T 3m6i_A 176 GVRLGDPVLIC----GAGPIGLITMLCAKAAGACPLVIT 210 (363)
T ss_dssp TCCTTCCEEEE----CCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEEE
Confidence 45789999996 3488889999999999998 5443
No 113
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=23.09 E-value=1.4e+02 Score=20.59 Aligned_cols=30 Identities=23% Similarity=0.340 Sum_probs=19.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
.+.+||||||=-..... ..++++..|..+.
T Consensus 6 ~~~~ILivdd~~~~~~~---l~~~L~~~g~~v~ 35 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMV---TKGLLVHLGCEVT 35 (136)
T ss_dssp TTCEEEEECSCHHHHHH---HHHHHHHTTCEEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHHcCCeEE
Confidence 56789999997654433 3444556676653
No 114
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=23.07 E-value=1.2e+02 Score=26.22 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=23.8
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH 187 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~ 187 (216)
.+.+|++|||+ ..|+.=..++++++..|+.
T Consensus 182 ~~~~g~~VlV~----GaG~vG~~aiqlAk~~Ga~ 211 (398)
T 1kol_A 182 GVGPGSTVYVA----GAGPVGLAAAASARLLGAA 211 (398)
T ss_dssp TCCTTCEEEEE----CCSHHHHHHHHHHHHTTCS
T ss_pred CCCCCCEEEEE----CCcHHHHHHHHHHHHCCCC
Confidence 45688999885 3588888889999999984
No 115
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=23.05 E-value=1.2e+02 Score=25.82 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=27.8
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||.- ++|+.=..++++++..|++|+.
T Consensus 167 ~~~~g~~vlV~G---asggiG~~~~~~a~~~Ga~Vi~ 200 (351)
T 1yb5_A 167 CVKAGESVLVHG---ASGGVGLAACQIARAYGLKILG 200 (351)
T ss_dssp CCCTTCEEEEET---CSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcCEEEEEC---CCChHHHHHHHHHHHCCCEEEE
Confidence 457899998863 5788889999999999998754
No 116
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=23.03 E-value=1.5e+02 Score=20.56 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=19.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
..+.+||||||=-.....+ .+.|++.|..+.
T Consensus 16 ~~~~~ilivdd~~~~~~~l---~~~L~~~g~~v~ 46 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEI---EKGLNVKGFMAD 46 (137)
T ss_dssp TTCSEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred CCCCeEEEEeCCHHHHHHH---HHHHHHcCcEEE
Confidence 4678999999876444433 444555676543
No 117
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=22.82 E-value=1.3e+02 Score=25.22 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||. ..|+.-..++++++..|+.++.+
T Consensus 157 ~~~~g~~VlV~----GaG~vG~~aiq~ak~~G~~~vi~ 190 (346)
T 4a2c_A 157 QGCENKNVIII----GAGTIGLLAIQCAVALGAKSVTA 190 (346)
T ss_dssp TCCTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred ccCCCCEEEEE----CCCCcchHHHHHHHHcCCcEEEE
Confidence 45789999986 45888888999999999987543
No 118
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=22.74 E-value=1.1e+02 Score=25.68 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=28.5
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||+ -.+|+.=..++++++..|++++.+
T Consensus 148 ~~~~~g~~vlV~---Ga~G~vG~~a~q~a~~~Ga~vi~~ 183 (321)
T 3tqh_A 148 AEVKQGDVVLIH---AGAGGVGHLAIQLAKQKGTTVITT 183 (321)
T ss_dssp TTCCTTCEEEES---STTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEE---cCCcHHHHHHHHHHHHcCCEEEEE
Confidence 345789999874 248899999999999999987543
No 119
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.64 E-value=1e+02 Score=21.37 Aligned_cols=30 Identities=7% Similarity=-0.006 Sum_probs=19.7
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcC-CEEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVG-VHVV 189 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~G-a~vv 189 (216)
...+||||||=-.. .....+.|++.| ..+.
T Consensus 13 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~~v~ 43 (135)
T 3snk_A 13 KRKQVALFSSDPNF---KRDVATRLDALAIYDVR 43 (135)
T ss_dssp CCEEEEEECSCHHH---HHHHHHHHHHTSSEEEE
T ss_pred CCcEEEEEcCCHHH---HHHHHHHHhhcCCeEEE
Confidence 45689999996544 444556667777 5543
No 120
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=22.61 E-value=79 Score=22.16 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=25.6
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+.+++.|+++++ +|.....+...|++.|.+-
T Consensus 49 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~ 79 (106)
T 3hix_A 49 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEH 79 (106)
T ss_dssp SCTTSCEEEECS---SHHHHHHHHHHHHHTTCSC
T ss_pred CCCCCeEEEEEC---CCChHHHHHHHHHHcCCcC
Confidence 456788998875 7888889999999999863
No 121
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=22.61 E-value=92 Score=21.78 Aligned_cols=29 Identities=21% Similarity=0.210 Sum_probs=18.5
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 158 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 158 G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
..+||||||=-.. .....++|++.|..+.
T Consensus 6 ~~~ilivdd~~~~---~~~l~~~L~~~g~~v~ 34 (136)
T 3kto_A 6 HPIIYLVDHQKDA---RAALSKLLSPLDVTIQ 34 (136)
T ss_dssp -CEEEEECSCHHH---HHHHHHHHTTSSSEEE
T ss_pred CCeEEEEcCCHHH---HHHHHHHHHHCCcEEE
Confidence 4589999996543 3444556667777654
No 122
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=22.59 E-value=89 Score=21.63 Aligned_cols=27 Identities=26% Similarity=0.340 Sum_probs=15.1
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCE
Q 027972 158 GERALIVDDLVATGGTLSAAIRLLERVGVH 187 (216)
Q Consensus 158 G~rVLIVDDVitTGgTl~aai~lL~~~Ga~ 187 (216)
+.+||||||=-... ....+.|++.|..
T Consensus 5 ~~~iLivdd~~~~~---~~l~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSSTMR---RIIKNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHHHH---HHHHHHHHHTTCC
T ss_pred CcEEEEEeCCHHHH---HHHHHHHHHcCCc
Confidence 45788888855333 3334445566654
No 123
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=22.58 E-value=1.2e+02 Score=25.23 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=27.2
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||.-- |+.=..++++++..|++|+.+
T Consensus 138 ~~~~~g~~VlV~Ga----G~vG~~a~qlak~~Ga~Vi~~ 172 (315)
T 3goh_A 138 IPLTKQREVLIVGF----GAVNNLLTQMLNNAGYVVDLV 172 (315)
T ss_dssp SCCCSCCEEEEECC----SHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCCCCEEEEECC----CHHHHHHHHHHHHcCCEEEEE
Confidence 34578999998743 777788899999999987554
No 124
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=22.49 E-value=1.1e+02 Score=26.20 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=28.5
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
..+.+|++|||. -.+|+.=..++++++..|++|+.+
T Consensus 163 ~~~~~g~~VlV~---Gg~g~iG~~~~~~a~~~Ga~Vi~~ 198 (353)
T 4dup_A 163 AGLTEGESVLIH---GGTSGIGTTAIQLARAFGAEVYAT 198 (353)
T ss_dssp TCCCTTCEEEES---STTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEE---cCCCHHHHHHHHHHHHcCCEEEEE
Confidence 345789999874 268888999999999999987544
No 125
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=22.31 E-value=82 Score=22.27 Aligned_cols=13 Identities=31% Similarity=0.378 Sum_probs=8.8
Q ss_pred cCCCEEEEEeccc
Q 027972 156 QAGERALIVDDLV 168 (216)
Q Consensus 156 ~~G~rVLIVDDVi 168 (216)
.++.+|+||||=-
T Consensus 11 ~~~~~vlivdd~~ 23 (145)
T 3kyj_B 11 GSPYNVMIVDDAA 23 (145)
T ss_dssp CCSEEEEEECSCH
T ss_pred CCCCeEEEEcCCH
Confidence 3556788888754
No 126
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=22.23 E-value=15 Score=28.86 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=36.2
Q ss_pred HHhhcccCCCCCCCCcEEEechhhhcCH--HHHHHHHHHHHHHhcCCCcc
Q 027972 81 ISSAIRVIPDFPKPGIMFQDITTLLLDT--KAFRDTIDLFVERYKDKNIS 128 (216)
Q Consensus 81 l~~~Ir~~PdfPk~Gi~f~Dit~Ll~dP--~~~~~l~~~lae~~~~~~iD 128 (216)
+.++... -++|.||.+|.+|..+..+. +.+.++++.|.+++.+.+..
T Consensus 16 V~~ATs~-d~~~~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~ 64 (140)
T 1vdy_A 16 IDAVTSD-EDKVAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPI 64 (140)
T ss_dssp HHHTTCS-CSSCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHH
T ss_pred HHHHhcC-CCCCCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcc
Confidence 4455444 45778999999998887653 67899999999999886654
No 127
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=22.22 E-value=1.2e+02 Score=25.72 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=27.7
Q ss_pred cccCC-CEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAG-ERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G-~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+| ++|||. -++|+.=..++++++..|++++.+
T Consensus 163 ~~~~g~~~VlV~---Ga~G~vG~~aiqlak~~Ga~vi~~ 198 (364)
T 1gu7_A 163 KLTPGKDWFIQN---GGTSAVGKYASQIGKLLNFNSISV 198 (364)
T ss_dssp CCCTTTCEEEES---CTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCCCCcEEEEC---CCCcHHHHHHHHHHHHCCCEEEEE
Confidence 45688 899874 356888889999999999987544
No 128
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=22.11 E-value=1.4e+02 Score=21.60 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=31.2
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH 187 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~ 187 (216)
.+.+|++++=|++.-.++-+...++++++..|..
T Consensus 71 gL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 104 (120)
T 2iwo_A 71 KLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGS 104 (120)
T ss_dssp CCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5679999999999999999999999999999876
No 129
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=22.09 E-value=1.3e+02 Score=23.61 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=31.5
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+..|+++|=|++.-.+|.|...++++++..|..+
T Consensus 129 ~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v 163 (170)
T 3egg_C 129 RIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRV 163 (170)
T ss_dssp CCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 37899999999999999999999999999987654
No 130
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=22.04 E-value=1.3e+02 Score=23.21 Aligned_cols=28 Identities=36% Similarity=0.528 Sum_probs=17.8
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCC
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGV 186 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga 186 (216)
..+.+||||||=-. ......++|++.|.
T Consensus 59 ~~~~~ILiVdDd~~---~~~~l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFI---SRKVATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred cCCCEEEEEeCCHH---HHHHHHHHHHHcCC
Confidence 46779999999543 33334455556665
No 131
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=22.02 E-value=1.1e+02 Score=25.62 Aligned_cols=35 Identities=29% Similarity=0.438 Sum_probs=27.4
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
.+.+|++|||+- ++|+.=..++++++..|++|+.+
T Consensus 145 ~~~~g~~vlV~G---a~g~iG~~~~~~a~~~Ga~Vi~~ 179 (334)
T 3qwb_A 145 HVKKGDYVLLFA---AAGGVGLILNQLLKMKGAHTIAV 179 (334)
T ss_dssp CCCTTCEEEESS---TTBHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEEC---CCCHHHHHHHHHHHHCCCEEEEE
Confidence 457899998752 37888899999999999987543
No 132
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=21.82 E-value=1.3e+02 Score=25.66 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=26.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||+- + |+.=..++++++..|++|+.
T Consensus 176 ~~~~g~~VlV~G---a-G~vG~~~~qlak~~Ga~Vi~ 208 (360)
T 1piw_A 176 GCGPGKKVGIVG---L-GGIGSMGTLISKAMGAETYV 208 (360)
T ss_dssp TCSTTCEEEEEC---C-SHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEEEEC---C-CHHHHHHHHHHHHCCCEEEE
Confidence 456899999974 3 77778889999999998643
No 133
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=21.74 E-value=1.3e+02 Score=26.74 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=29.1
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA 192 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~va 192 (216)
.+.+|++|||+ -++|+.=..++++++..|++++.+.
T Consensus 225 ~~~~g~~VlV~---GasG~vG~~avqlak~~Ga~vi~~~ 260 (456)
T 3krt_A 225 GMKQGDNVLIW---GASGGLGSYATQFALAGGANPICVV 260 (456)
T ss_dssp CCCTTCEEEET---TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEE---CCCCHHHHHHHHHHHHcCCeEEEEE
Confidence 45789999885 4578889999999999999876543
No 134
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=21.72 E-value=91 Score=26.51 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=25.8
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
.+.+|++|||+ ..|+.=..++++.+..|+ +|+.
T Consensus 163 ~~~~g~~VlV~----GaG~vG~~a~qla~~~Ga~~Vi~ 196 (352)
T 3fpc_A 163 NIKLGDTVCVI----GIGPVGLMSVAGANHLGAGRIFA 196 (352)
T ss_dssp TCCTTCCEEEE----CCSHHHHHHHHHHHTTTCSSEEE
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHHHcCCcEEEE
Confidence 45789999987 358888889999999998 5643
No 135
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=21.72 E-value=1.3e+02 Score=25.48 Aligned_cols=32 Identities=28% Similarity=0.479 Sum_probs=26.4
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 191 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~v 191 (216)
+|++|||+ -.+|+.=..++++++..|++|+.+
T Consensus 150 ~g~~VlV~---gg~G~vG~~a~qla~~~Ga~Vi~~ 181 (346)
T 3fbg_A 150 EGKTLLII---NGAGGVGSIATQIAKAYGLRVITT 181 (346)
T ss_dssp TTCEEEEE---STTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE---cCCCHHHHHHHHHHHHcCCEEEEE
Confidence 79999875 368888899999999999987554
No 136
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=21.65 E-value=1.7e+02 Score=19.05 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=12.8
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 159 ERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 159 ~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+||||||=-... ....+.+++.|..+
T Consensus 2 ~~iliv~~~~~~~---~~l~~~l~~~g~~v 28 (119)
T 2j48_A 2 GHILLLEEEDEAA---TVVCEMLTAAGFKV 28 (119)
T ss_dssp CEEEEECCCHHHH---HHHHHHHHHTTCEE
T ss_pred CEEEEEeCCHHHH---HHHHHHHHhCCcEE
Confidence 4667776644322 23333344455544
No 137
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=21.57 E-value=1.5e+02 Score=19.60 Aligned_cols=26 Identities=27% Similarity=0.323 Sum_probs=13.4
Q ss_pred EEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 160 RALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 160 rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+|+||||=-.....+ ...++..|..+
T Consensus 3 ~ilivdd~~~~~~~l---~~~l~~~~~~v 28 (120)
T 2a9o_A 3 KILIVDDEKPISDII---KFNMTKEGYEV 28 (120)
T ss_dssp EEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred eEEEEcCCHHHHHHH---HHHHHhcCcEE
Confidence 677777754333332 33444555544
No 138
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.56 E-value=1.4e+02 Score=20.80 Aligned_cols=27 Identities=33% Similarity=0.372 Sum_probs=13.8
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 159 ERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 159 ~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+||||||=-. ......+.|++.|..+
T Consensus 4 ~~ilivdd~~~---~~~~l~~~l~~~g~~v 30 (143)
T 3jte_A 4 AKILVIDDEST---ILQNIKFLLEIDGNEV 30 (143)
T ss_dssp CEEEEECSCHH---HHHHHHHHHHHTTCEE
T ss_pred CEEEEEcCCHH---HHHHHHHHHHhCCceE
Confidence 46777777432 3333344445555443
No 139
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=21.48 E-value=1.1e+02 Score=26.17 Aligned_cols=34 Identities=29% Similarity=0.544 Sum_probs=26.8
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
.+.+|++|||. -++|+.=..++++++..|++|+.
T Consensus 160 ~~~~g~~VlV~---Ga~G~iG~~~~q~a~~~Ga~Vi~ 193 (362)
T 2c0c_A 160 GLSEGKKVLVT---AAAGGTGQFAMQLSKKAKCHVIG 193 (362)
T ss_dssp CCCTTCEEEET---TTTBTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEe---CCCcHHHHHHHHHHHhCCCEEEE
Confidence 45789999883 34788888999999999997644
No 140
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=21.41 E-value=1.5e+02 Score=25.39 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=27.0
Q ss_pred ccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEE
Q 027972 155 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 190 (216)
Q Consensus 155 i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv~ 190 (216)
+.+|++|||. -++|+.=..++++++..|++|+.
T Consensus 181 ~~~g~~VlV~---Ga~G~vG~~~~qla~~~Ga~Vi~ 213 (375)
T 2vn8_A 181 NCTGKRVLIL---GASGGVGTFAIQVMKAWDAHVTA 213 (375)
T ss_dssp TCTTCEEEEE---TTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCEEEEE---CCCCHHHHHHHHHHHhCCCEEEE
Confidence 6789999885 34788888999999999998754
No 141
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=21.13 E-value=1.4e+02 Score=20.82 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=31.5
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+.+|+.++=|++.-.++.+...+.+++++.+..+
T Consensus 53 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v 87 (103)
T 2dc2_A 53 GLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 87 (103)
T ss_dssp CCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 56789999999999999999999999999988754
No 142
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=21.10 E-value=1.3e+02 Score=25.44 Aligned_cols=30 Identities=37% Similarity=0.574 Sum_probs=25.7
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
..|+++|| +-+||+.++++-.|.+.|+..+
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i 152 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASI 152 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEE
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeE
Confidence 57899986 5799999999999999998653
No 143
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=20.80 E-value=1.5e+02 Score=19.49 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=25.1
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 189 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~vv 189 (216)
.+++.|+++.+ +|.....+...|++.|.+.+
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCE
Confidence 46788888875 68888889999999998643
No 144
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.55 E-value=1.2e+02 Score=21.34 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=21.5
Q ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcC-CEEEE
Q 027972 156 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVE 190 (216)
Q Consensus 156 ~~G~rVLIVDDVitTGgTl~aai~lL~~~G-a~vv~ 190 (216)
.++.+||||||=-.. .....++|++.| ..++.
T Consensus 18 ~~~~~ilivdd~~~~---~~~l~~~L~~~g~~~v~~ 50 (146)
T 4dad_A 18 QGMINILVASEDASR---LAHLARLVGDAGRYRVTR 50 (146)
T ss_dssp GGGCEEEEECSCHHH---HHHHHHHHHHHCSCEEEE
T ss_pred CCCCeEEEEeCCHHH---HHHHHHHHhhCCCeEEEE
Confidence 467899999996644 344556667777 66543
No 145
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=20.53 E-value=95 Score=23.21 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=26.3
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+.+++.|+++++ +|.....+...|++.|.+-
T Consensus 52 ~l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~ 83 (141)
T 3ilm_A 52 SLEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEH 83 (141)
T ss_dssp TSCTTSEEEEECS---SHHHHHHHHHHHHHTTCCS
T ss_pred cCCCCCeEEEEEC---CChHHHHHHHHHHHcCCCC
Confidence 3467888999887 7888889999999999863
No 146
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=20.28 E-value=36 Score=25.38 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=18.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 157 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 157 ~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
+.-|||||||=-.....+... |++.|.+|
T Consensus 7 r~~rILiVdD~~~~~~~l~~~---L~~~G~~v 35 (123)
T 2lpm_A 7 RRLRVLVVEDESMIAMLIEDT---LCELGHEV 35 (123)
T ss_dssp CCCCEEEESSSTTTSHHHHHH---HHHHCCCC
T ss_pred CCCEEEEEeCCHHHHHHHHHH---HHHCCCEE
Confidence 345899999976655554433 34556654
No 147
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=20.17 E-value=1.3e+02 Score=21.86 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=31.5
Q ss_pred cccCCCEEEEEeccccccHHHHHHHHHHHHcCCEE
Q 027972 154 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 188 (216)
Q Consensus 154 ~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga~v 188 (216)
.+.+|+.++=|++.-.+|-|...+.++++..|..+
T Consensus 71 ~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 105 (118)
T 3b76_A 71 RIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSI 105 (118)
T ss_dssp SSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 37899999999999999999999999999887663
No 148
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=20.09 E-value=1e+02 Score=26.58 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=27.1
Q ss_pred CcccCCCEEEEEeccccccHHHHHHHHHHHHcCC-EEEE
Q 027972 153 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGV-HVVE 190 (216)
Q Consensus 153 ~~i~~G~rVLIVDDVitTGgTl~aai~lL~~~Ga-~vv~ 190 (216)
..+.+|++|||+ ..|+.=..++++++..|+ +|+.
T Consensus 189 ~~~~~g~~VlV~----GaG~vG~~a~q~a~~~Ga~~Vi~ 223 (378)
T 3uko_A 189 AKVEPGSNVAIF----GLGTVGLAVAEGAKTAGASRIIG 223 (378)
T ss_dssp TCCCTTCCEEEE----CCSHHHHHHHHHHHHHTCSCEEE
T ss_pred cCCCCCCEEEEE----CCCHHHHHHHHHHHHcCCCeEEE
Confidence 355789999997 348888999999999999 5643
Done!