Query 027975
Match_columns 216
No_of_seqs 132 out of 1122
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 06:25:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mal_A Stromal cell-derived fa 100.0 4.6E-58 1.6E-62 376.7 18.4 186 30-215 12-197 (199)
2 1t9f_A Protein 1D10; structura 100.0 1.8E-55 6.2E-60 358.5 17.9 183 31-215 2-185 (187)
3 3uj4_A Inositol 1,4,5-trisphos 100.0 7.2E-33 2.4E-37 259.1 11.6 146 29-178 169-319 (604)
4 3mal_A Stromal cell-derived fa 99.9 5.7E-26 1.9E-30 186.0 12.1 111 31-150 75-189 (199)
5 1t9f_A Protein 1D10; structura 99.9 3.8E-24 1.3E-28 173.7 12.0 109 31-149 64-176 (187)
6 2xoa_A Ryanodine receptor 1; m 99.9 4.5E-24 1.5E-28 198.6 12.5 152 29-194 156-317 (559)
7 3uj4_A Inositol 1,4,5-trisphos 99.9 6.1E-24 2.1E-28 198.8 13.1 167 30-206 109-286 (604)
8 2xoa_A Ryanodine receptor 1; m 99.8 2E-20 6.9E-25 174.0 17.7 161 30-206 95-264 (559)
9 1n4k_A Inositol 1,4,5-trisphos 99.7 6.8E-17 2.3E-21 144.1 10.3 174 31-206 6-211 (381)
10 1n4k_A Inositol 1,4,5-trisphos 99.5 2.4E-15 8.1E-20 134.1 4.5 85 94-178 7-96 (381)
11 3im6_A Cardiac Ca2+ release ch 99.0 2.7E-09 9.3E-14 86.5 12.1 108 30-149 107-216 (217)
12 1xzz_A Inositol 1,4,5-trisphos 99.0 3.7E-09 1.3E-13 88.8 11.8 113 30-150 124-238 (246)
13 3im6_A Cardiac Ca2+ release ch 98.4 1.9E-06 6.4E-11 69.9 11.3 101 94-205 109-215 (217)
14 1xzz_A Inositol 1,4,5-trisphos 98.4 1E-06 3.5E-11 73.9 9.9 107 94-207 126-238 (246)
15 3pg0_A Threefoil; symmetric de 95.8 0.45 1.5E-05 36.1 14.2 139 39-206 26-164 (165)
16 3vsf_A Ricin B lectin; GH43 CB 90.5 3.9 0.00013 37.0 12.7 138 39-208 360-500 (526)
17 3llp_A Fascin; beta-trefoil, a 90.1 1.1 3.7E-05 40.8 8.5 124 42-208 14-138 (493)
18 2fdb_M FGF8B, fibroblast growt 90.1 1.9 6.6E-05 33.4 8.9 61 103-178 31-91 (164)
19 1bfg_A Basic fibroblast growth 89.1 2.1 7.2E-05 32.5 8.3 63 100-178 17-79 (146)
20 1rg8_A Heparin-binding growth 88.4 4.3 0.00015 30.8 9.5 60 103-178 17-76 (146)
21 3ef2_A Agglutinin, lectin; bet 88.4 6.1 0.00021 33.4 11.5 116 41-177 7-126 (293)
22 1q1u_A FGF-12, fibrobast growt 88.0 3.2 0.00011 31.4 8.6 61 101-178 10-70 (144)
23 1qql_A Fibroblast growth facto 87.3 2.7 9.3E-05 31.6 7.8 60 103-178 9-70 (140)
24 3phz_A Ricin B-related lectin; 87.0 4.6 0.00016 34.1 9.7 137 41-206 8-148 (286)
25 3q7x_A De novo designed beta-t 86.6 7.9 0.00027 28.6 12.3 102 41-178 7-108 (132)
26 2p39_A Fibroblast growth facto 85.4 8.5 0.00029 29.4 9.8 61 101-178 13-75 (155)
27 1nun_A Fibroblast growth facto 85.1 10 0.00036 28.5 10.8 58 104-178 17-74 (145)
28 1ijt_A FGF4, fibroblast growth 82.3 13 0.00043 27.4 9.4 58 104-178 6-64 (128)
29 3nbc_A Ricin B-like lectin; la 81.4 15 0.00051 27.6 12.1 108 41-176 6-118 (148)
30 2yug_A Protein FRG1; spliceoso 77.9 20 0.00069 27.0 10.9 76 102-205 72-148 (155)
31 3llp_A Fascin; beta-trefoil, a 77.8 17 0.00057 33.0 10.4 111 40-195 58-168 (493)
32 3pg0_A Threefoil; symmetric de 77.5 19 0.00065 26.7 9.3 91 40-149 74-164 (165)
33 1ihk_A GLIA-activating factor; 72.7 26 0.00089 27.2 9.0 59 103-178 29-87 (174)
34 2f2f_C CDT C, cytolethal diste 70.9 22 0.00074 28.0 8.1 128 38-208 36-170 (186)
35 3phz_A Ricin B-related lectin; 70.8 39 0.0013 28.3 10.2 94 39-151 57-150 (286)
36 1qql_A Fibroblast growth facto 67.2 18 0.00061 27.0 6.7 61 39-119 7-69 (140)
37 3f1r_A FGF-20, fibroblast grow 65.7 50 0.0017 26.4 9.5 59 103-178 66-124 (211)
38 1bfg_A Basic fibroblast growth 64.9 22 0.00074 26.7 6.8 63 37-119 16-78 (146)
39 2p39_A Fibroblast growth facto 64.6 28 0.00095 26.5 7.4 62 38-120 12-75 (155)
40 1q1u_A FGF-12, fibrobast growt 59.1 30 0.001 25.9 6.7 60 39-119 10-69 (144)
41 1ups_A Glcnac-alpha-1,4-GAL-re 58.0 73 0.0025 27.9 10.1 88 37-150 331-419 (420)
42 2p23_A FGF-19, fibroblast grow 57.6 30 0.001 27.3 6.7 49 113-178 36-84 (194)
43 2yug_A Protein FRG1; spliceoso 57.6 58 0.002 24.4 9.8 79 40-150 72-150 (155)
44 3hbw_A Fibroblast growth facto 57.5 35 0.0012 27.0 7.0 63 99-178 14-76 (193)
45 1rg8_A Heparin-binding growth 57.4 52 0.0018 24.6 7.8 59 41-119 17-75 (146)
46 1pwa_A FGF-19, fibroblast grow 56.5 33 0.0011 26.2 6.6 49 113-178 24-72 (162)
47 1sr4_A CDT A, cytolethal diste 55.3 65 0.0022 25.6 8.3 90 38-148 106-196 (206)
48 2fdb_M FGF8B, fibroblast growt 53.8 48 0.0016 25.4 7.1 62 39-119 26-90 (164)
49 2y9f_A LSL-150, hemolytic lect 53.6 61 0.0021 24.1 7.3 91 101-208 10-102 (150)
50 3q7x_A De novo designed beta-t 48.2 77 0.0026 23.1 7.6 59 103-177 7-65 (132)
51 3vsf_A Ricin B lectin; GH43 CB 48.0 61 0.0021 29.0 8.1 94 40-152 408-501 (526)
52 3p6i_A De novo designed beta-t 47.9 84 0.0029 23.4 14.0 99 42-176 43-141 (142)
53 1sr4_A CDT A, cytolethal diste 42.8 1E+02 0.0034 24.6 7.5 88 101-206 107-197 (206)
54 3ef2_A Agglutinin, lectin; bet 41.2 1E+02 0.0035 25.7 7.9 97 39-152 57-158 (293)
55 2vse_A MTX holotoxin, mosquito 40.7 2.6E+02 0.0088 27.0 12.1 118 32-176 264-383 (841)
56 3nbc_A Ricin B-like lectin; la 40.7 63 0.0022 24.0 5.9 90 99-206 3-97 (148)
57 3p6j_A De novo designed beta-t 40.1 1.1E+02 0.0038 22.6 12.2 102 41-178 32-133 (142)
58 1pwa_A FGF-19, fibroblast grow 37.5 92 0.0031 23.7 6.4 60 39-119 5-71 (162)
59 2p23_A FGF-19, fibroblast grow 36.3 93 0.0032 24.5 6.4 60 39-119 17-83 (194)
60 1ijt_A FGF4, fibroblast growth 35.3 1.2E+02 0.0042 21.9 6.6 49 50-119 15-63 (128)
61 1sr4_C CDT C, cytolethal diste 34.4 81 0.0028 24.2 5.6 128 38-208 16-150 (166)
62 3iag_C Recombining binding pro 32.7 63 0.0022 28.5 5.2 72 32-115 151-233 (422)
63 1lgh_A LH II, B800/850, light 30.2 21 0.00072 22.5 1.4 15 2-16 27-41 (56)
64 3hbw_A Fibroblast growth facto 30.1 1.5E+02 0.0052 23.2 6.7 64 36-120 13-76 (193)
65 2y9f_A LSL-150, hemolytic lect 29.4 1.7E+02 0.006 21.6 10.4 118 39-181 10-128 (150)
66 2vse_A MTX holotoxin, mosquito 28.8 4E+02 0.014 25.6 11.7 92 41-150 319-411 (841)
67 1nun_A Fibroblast growth facto 27.8 1.8E+02 0.0063 21.4 8.1 51 49-119 23-73 (145)
68 3brd_A LIN-12 and GLP-1 phenot 25.8 91 0.0031 28.0 5.1 70 34-115 198-280 (477)
69 1jlx_A Agglutinin, amaranthin, 24.8 3.1E+02 0.011 23.0 9.0 44 78-121 73-127 (303)
70 3p6j_A De novo designed beta-t 24.2 2.2E+02 0.0074 21.0 8.8 59 103-177 32-90 (142)
71 3p6i_A De novo designed beta-t 22.1 2.4E+02 0.0083 20.8 10.2 60 102-177 41-100 (142)
72 3snv_A Symfoil-4T/permutation 22.1 2.4E+02 0.0081 20.7 11.4 83 68-178 29-111 (143)
73 3zx7_A Lysenin; toxin, pore fo 21.2 3.1E+02 0.011 21.7 7.4 48 94-151 248-296 (309)
74 1ihk_A GLIA-activating factor; 20.9 2.8E+02 0.0097 21.1 7.4 57 42-119 30-86 (174)
No 1
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=100.00 E-value=4.6e-58 Score=376.68 Aligned_cols=186 Identities=79% Similarity=1.347 Sum_probs=170.4
Q ss_pred cCCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeC
Q 027975 30 SSETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHM 109 (216)
Q Consensus 30 ~~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~ 109 (216)
..++..|.|||+|+|+|+.|++|||||.+.||.||+|||||||++.+|.||+|+|++..+.....+++|++||+|||+|+
T Consensus 12 ~~~~~~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~ 91 (199)
T 3mal_A 12 GKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHM 91 (199)
T ss_dssp ----CBCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEET
T ss_pred CCCCCEEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEEC
Confidence 56788999999999999999999999999999999999999999856889999999887655567889999999999999
Q ss_pred CCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCee
Q 027975 110 RTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQE 189 (216)
Q Consensus 110 ~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~E 189 (216)
.|++|||||++++|+++++||+|++..+.+|.++.|+||+.+.++.++.++.|||+|+.|||||.+|+.+||+|+++|+|
T Consensus 92 ~T~~~LhSH~~~~P~s~~~EVs~~~~~~~~D~~d~W~Vei~~~~~~~~~~~~fRL~H~~T~~yL~sh~~~lp~wg~~Q~E 171 (199)
T 3mal_A 92 KTRKWLHSHLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQE 171 (199)
T ss_dssp TTCCEEEEEEEECTTTCSEEEEEECBTTBCCGGGCEEEEESSSCCBCBTTCEEEEEETTTCCEEEEEEEECCSSSTTCEE
T ss_pred CCCCCEeECCcCCCCCCCeEEEEeccCCCCCCCCeEEEEEcCCCCEEEcCCeEEEEECCCCeEEeeCCCCCCCCCCcceE
Confidence 99999999999999999999999996666899999999998878889999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCcEEEeeeecCCCCCC
Q 027975 190 VCGVREKRADNVWLAAEGVYLPVTES 215 (216)
Q Consensus 190 V~c~~~~~~~~~W~i~~~~~~~~~~~ 215 (216)
|+|.+.++.+++|+|+|++|+|++++
T Consensus 172 V~~~~~~~~~~~W~vee~~~~~~~~~ 197 (199)
T 3mal_A 172 VCGIREKKADNIWLAAEGVYLPLNES 197 (199)
T ss_dssp EEEESSCCGGGCEEEEEEECCCCCC-
T ss_pred EEeeCCCCCCCeEEeCccccCCcccc
Confidence 99998888899999999999999864
No 2
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=100.00 E-value=1.8e-55 Score=358.49 Aligned_cols=183 Identities=43% Similarity=0.731 Sum_probs=163.6
Q ss_pred CCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCC
Q 027975 31 SETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMR 110 (216)
Q Consensus 31 ~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~ 110 (216)
++++.|+|||+|+|+|+.|++|||||.++||.+|+||+||||++..|.||+|+|++.....+..+++|++||+|||+|+.
T Consensus 2 s~~~~V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~ 81 (187)
T 1t9f_A 2 SDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLT 81 (187)
T ss_dssp CTTCBCBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETT
T ss_pred CCCCEEEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECC
Confidence 57889999999999999999999999999999999999999998448999999999877666678999999999999999
Q ss_pred CCCeEEecCCCCCCC-CceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCee
Q 027975 111 TRKWLHSHLHASPIS-GNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQE 189 (216)
Q Consensus 111 T~~~L~sh~~~~p~s-~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~E 189 (216)
|++||++|++++|++ +++||+|++....+|+++.|+||+. +..|+.++.|||+|+.|||||++++.+||+|+++|+|
T Consensus 82 T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d~W~vei~--~~~~~~~~~fRL~H~~tg~yL~~~~~~lp~w~~~Q~E 159 (187)
T 1t9f_A 82 TGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVICN--GDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQRE 159 (187)
T ss_dssp TCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGGCEEEECS--SSSCBTTSEEEEEETTTCCEEEEEEEECCTTSTTCEE
T ss_pred CCCCEeECCcCCCCCCCceEEEEecccCCCCCCCeEEEEEc--CCEEecCCeEEEEECCcCeEEecCCcccCCCCCCceE
Confidence 999999999999999 4899999987666899999999986 4568899999999999999999999999999999999
Q ss_pred EEEEeCCCCCCcEEEeeeecCCCCCC
Q 027975 190 VCGVREKRADNVWLAAEGVYLPVTES 215 (216)
Q Consensus 190 V~c~~~~~~~~~W~i~~~~~~~~~~~ 215 (216)
|+|.++++.+++|+|||++|++++++
T Consensus 160 V~~~~~~~~~~~W~vee~~~~~~~~~ 185 (187)
T 1t9f_A 160 VVGTDSITGGSAWKVAEGIYIKHQQK 185 (187)
T ss_dssp EEEESSCCTTCCEEEECCC-------
T ss_pred EEEecCCCCCCEEEECcccccCCCCC
Confidence 99998888899999999999998765
No 3
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.98 E-value=7.2e-33 Score=259.05 Aligned_cols=146 Identities=21% Similarity=0.293 Sum_probs=130.0
Q ss_pred ccCCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 29 ASSETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 29 ~~~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
.+.+++.|++||+|+|+|+.||+|||||...||.||++||||+ .|.|+.|+|++........+.+|++||+|||+|
T Consensus 169 ~~~eGe~V~~Gd~V~L~~~~tg~~LHSh~~~yp~gS~qQqVt~----~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H 244 (604)
T 3uj4_A 169 LRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGANEVNS----VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFH 244 (604)
T ss_dssp TSCTTSBCBTTCEEEEEESSSCSCEEEEEEECSSSTTCEEEEE----SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEE
T ss_pred cccCCCeEeeCCEEEEEEcCCCCcEEeecccCCCCCCceEEEE----EcCCCeEEEEecCCCCcccCcccccCCEEEEEE
Confidence 4677889999999999999999999999999999999999997 488999999987654445678999999999999
Q ss_pred CCCCCeEEecCCCCCCCCceEEEEecCC-CCCCCCCcEEEEEec----CCceeccCCcEEEEEccCCceeccCCC
Q 027975 109 MRTRKWLHSHLHASPISGNLEISCFGGE-EESDTGDYWRVMIEG----SGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 109 ~~T~~~L~sh~~~~p~s~~~EVs~~~~~-~~~d~~~~W~IE~~~----~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..|++|||||++++|....+||+|++.. ..+|++++|+||+.+ .|.++++++.|||+|+.|||||.++..
T Consensus 245 ~~T~~~LhSH~~~~P~~~~~eVs~yg~~~~~gd~ndlW~IEi~~~~~~~G~~~~~~s~fRLrH~~Tg~YL~s~~~ 319 (604)
T 3uj4_A 245 AEQEKFLTADEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPARGGAGYWNSLFRFKHLATGHYLAAEVD 319 (604)
T ss_dssp TTTTEEEEEEEETTEEEEEEECCC--CTTCCCCGGGEEEEEECCSSTTCCCBCBTTCEEEEEETTTCCEEEEEEC
T ss_pred CCCCCCeecCCCCCCCcceEEEeecccccCCCCCCCeEEEEEecCCcCCCCeEEecCeEEEEEcccCceeeeccC
Confidence 9999999999999998878999999854 578999999999974 367889999999999999999999865
No 4
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=99.93 E-value=5.7e-26 Score=186.02 Aligned_cols=111 Identities=26% Similarity=0.342 Sum_probs=97.5
Q ss_pred CCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCC--CCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 31 SETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDV--DDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 31 ~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~--~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
..++.|++||+|||+|+.|++|||||.+++|.+ ++||||||+.. +|.+++|+|++.+. +..++.++.|||+|
T Consensus 75 ~~~~~v~~gd~IRL~H~~T~~~LhSH~~~~P~s-~~~EVs~~~~~~~~D~~d~W~Vei~~~-----~~~~~~~~~fRL~H 148 (199)
T 3mal_A 75 KQGDAVKSGATIRLQHMKTRKWLHSHLHASPIS-GNLEVSCFGDDTNSDTGDHWKLIIEGS-----GKTWKQDQRVRLQH 148 (199)
T ss_dssp CTTSBCBTTCEEEEEETTTCCEEEEEEEECTTT-CSEEEEEECBTTBCCGGGCEEEEESSS-----CCBCBTTCEEEEEE
T ss_pred CCCcEeecCCEEEEEECCCCCCEeECCcCCCCC-CCeEEEEeccCCCCCCCCeEEEEEcCC-----CCEEEcCCeEEEEE
Confidence 346789999999999999999999999999995 79999999863 68999999998753 34567799999999
Q ss_pred CCCCCeEEecCCCCCCCC--ceEEEEecCCCCCCCCCcEEEEEe
Q 027975 109 MRTRKWLHSHLHASPISG--NLEISCFGGEEESDTGDYWRVMIE 150 (216)
Q Consensus 109 ~~T~~~L~sh~~~~p~s~--~~EVs~~~~~~~~d~~~~W~IE~~ 150 (216)
+.|+|||++|+.++|.|+ |+||+|... .+++++|.||..
T Consensus 149 ~~T~~yL~sh~~~lp~wg~~Q~EV~~~~~---~~~~~~W~vee~ 189 (199)
T 3mal_A 149 IDTSGYLHSHDKKYQRIAGGQQEVCGIRE---KKADNIWLAAEG 189 (199)
T ss_dssp TTTCCEEEEEEEECCSSSTTCEEEEEESS---CCGGGCEEEEEE
T ss_pred CCCCeEEeeCCCCCCCCCCcceEEEeeCC---CCCCCeEEeCcc
Confidence 999999999999999986 999999863 478899999864
No 5
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=99.91 E-value=3.8e-24 Score=173.74 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=95.5
Q ss_pred CCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecC--CCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 31 SETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPD--VDDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 31 ~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~--~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
...++|+.||+|||+|+.|++|||||.++.|.+..++||+||+. .+|.+++|+|++.. ..++.++.|||+|
T Consensus 64 ~~~~~v~~Gd~IRL~H~~T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d~W~vei~~-------~~~~~~~~fRL~H 136 (187)
T 1t9f_A 64 NRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVICNG-------DEWLESEQFKLRH 136 (187)
T ss_dssp CTTCBCCTTCEEEEEETTTCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGGCEEEECSS-------SSCBTTSEEEEEE
T ss_pred CCCCEeccCCEEEEEECCCCCCEeECCcCCCCCCCceEEEEecccCCCCCCCeEEEEEcC-------CEEecCCeEEEEE
Confidence 34778999999999999999999999999998767899999986 36889999999763 3467799999999
Q ss_pred CCCCCeEEecCCCCCCCC--ceEEEEecCCCCCCCCCcEEEEE
Q 027975 109 MRTRKWLHSHLHASPISG--NLEISCFGGEEESDTGDYWRVMI 149 (216)
Q Consensus 109 ~~T~~~L~sh~~~~p~s~--~~EVs~~~~~~~~d~~~~W~IE~ 149 (216)
+.|+|||.+|+.++|.|+ |+||+|... .+++++|.||.
T Consensus 137 ~~tg~yL~~~~~~lp~w~~~Q~EV~~~~~---~~~~~~W~vee 176 (187)
T 1t9f_A 137 AVTGSYLSLSGQQFGRPIHGQREVVGTDS---ITGGSAWKVAE 176 (187)
T ss_dssp TTTCCEEEEEEEECCTTSTTCEEEEEESS---CCTTCCEEEEC
T ss_pred CCcCeEEecCCcccCCCCCCceEEEEecC---CCCCCEEEECc
Confidence 999999999999998875 999999864 37889999985
No 6
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.91 E-value=4.5e-24 Score=198.58 Aligned_cols=152 Identities=22% Similarity=0.296 Sum_probs=115.7
Q ss_pred ccCCCCeeeeCCEEEEEeCCCCCCee-eecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEE
Q 027975 29 ASSETVEITYGTVLKLMHEKTKFRLH-SHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQ 107 (216)
Q Consensus 29 ~~~~~~~V~~Gd~I~L~h~~T~~~Lh-Sh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~ 107 (216)
.+.+++.|++||+|+|+|+.|++||| || ||. .+||+|+ |.|+.|+|.+..... ...+|++||+|||+
T Consensus 156 ~r~~G~~V~~Gd~V~L~~~~t~~~LH~S~---~~g---s~eVt~~----d~nt~W~I~~~~~~~--~~~~l~~GDvIRL~ 223 (559)
T 2xoa_A 156 QRSEGEKVRVGDDLILVSVSSERYLHLST---ASG---ELQVDAS----FMQTLWNMNPICSCC--EEGYVTGGHVLRLF 223 (559)
T ss_dssp TSCTTSBCBTTCEEEEEETTTCCEEEEEC----------CEEEEE----SSCCCEEEEEEECCC--CTTBCBTTCEEEEE
T ss_pred ccCCCCccccCCEEEEEECCCCCcccccC---CCC---CeEEEec----cCCCeEEEEEcccCC--ccccccCCCEEEEE
Confidence 47788999999999999999999999 66 553 4589986 568999999886543 26799999999999
Q ss_pred eCCCCCeEEecCCCCCCCCceEEEEecCCC-CCCCCCcEEEEEec---CCceeccCCcEEEEEccCCceeccCCCCC---
Q 027975 108 HMRTRKWLHSHLHASPISGNLEISCFGGEE-ESDTGDYWRVMIEG---SGKTWRQDQRIRLQHVDTGGYLHSHPKKY--- 180 (216)
Q Consensus 108 H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~-~~d~~~~W~IE~~~---~~~~~~~~s~frL~H~~t~~yL~s~~~~l--- 180 (216)
|..|++|||++... ..+++||+|++... .+|++++|+||+.. .|..+++++.|||+|+.|||||+++...-
T Consensus 224 H~~t~~~L~~~~~~--s~~~~ev~~y~~~~~~~d~~~~W~VE~v~~~~~G~~~~~~~~fRLrH~~TG~YL~~~~~~~~~~ 301 (559)
T 2xoa_A 224 HGHMDECLTISAAD--SDDQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRIRHVTTGRYLALTEDQGLVV 301 (559)
T ss_dssp CC---CEEEECCTT--CTTTTCBEEEECGGGGGSGGGCEEEEESCSTTTTSBCCTTCCEEEEETTTCCEEEEETTTEEEE
T ss_pred ecCCCceeeccCCC--cccceEEEeecCCCcCCCCCceEEEEEeccccCCCceEeCCeEEEEECCcCCeeeEcCCCCccc
Confidence 99999999976543 12488999998543 36889999999975 36788999999999999999999986521
Q ss_pred --CCCCCCCeeEEEEe
Q 027975 181 --QRIAGGQQEVCGVR 194 (216)
Q Consensus 181 --p~~~~~q~EV~c~~ 194 (216)
++......++.|..
T Consensus 302 ~~~~~~~~~~s~F~f~ 317 (559)
T 2xoa_A 302 VDACKAHTKATSFCFR 317 (559)
T ss_dssp ECGGGCCHHHHCEEEE
T ss_pred ccccccCCCccEEEEe
Confidence 22234445666653
No 7
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.90 E-value=6.1e-24 Score=198.78 Aligned_cols=167 Identities=17% Similarity=0.287 Sum_probs=141.1
Q ss_pred cCCCCeeeeCCEEEEEeCCCCCCeeeec-ccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 30 SSETVEITYGTVLKLMHEKTKFRLHSHE-VPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 30 ~~~~~~V~~Gd~I~L~h~~T~~~LhSh~-~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
..-+..|.||+.|+|+|+.|+.||+++. ..+...+.++.|++.+. .+++.+|+|.+... ....++.|.+||.|+|+|
T Consensus 109 k~~g~~V~YGs~IqL~H~~S~kyL~~~~~~~a~~e~~~~~V~L~~~-~~e~s~F~I~P~~k-~~~eGe~V~~Gd~V~L~~ 186 (604)
T 3uj4_A 109 KLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYK-LRSIGDSVVIGDKVVLNP 186 (604)
T ss_dssp TTTTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTCEEEEEESS-CCGGGCEEEEESST-TSCTTSBCBTTCEEEEEE
T ss_pred HhcCCeEEeCCeEEEEEcccCcEEEEcCCCcccccCCceEEEEEec-CCCCeEEEEecCcc-cccCCCeEeeCCEEEEEE
Confidence 5667899999999999999999999987 45666778899999997 78999999998864 345788999999999999
Q ss_pred CCCCCeEEecCCCCCCC-CceEEEEecCCCCCCCCCcEEEEEec-----CCceeccCCcEEEEEccCCceeccCCCCCCC
Q 027975 109 MRTRKWLHSHLHASPIS-GNLEISCFGGEEESDTGDYWRVMIEG-----SGKTWRQDQRIRLQHVDTGGYLHSHPKKYQR 182 (216)
Q Consensus 109 ~~T~~~L~sh~~~~p~s-~~~EVs~~~~~~~~d~~~~W~IE~~~-----~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~ 182 (216)
..|++|||||...+|.. ++|||+| .|.|+.|+|+... .+.+++.++.+||+|..|++||++|..+.|
T Consensus 187 ~~tg~~LHSh~~~yp~gS~qQqVt~------~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H~~T~~~LhSH~~~~P- 259 (604)
T 3uj4_A 187 VNAGQPLHASSHQLVDNPGANEVNS------VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTADEHRKK- 259 (604)
T ss_dssp SSSCSCEEEEEEECSSSTTCEEEEE------SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEETTTTEEEEEEEETTE-
T ss_pred cCCCCcEEeecccCCCCCCceEEEE------EcCCCeEEEEecCCCCcccCcccccCCEEEEEECCCCCCeecCCCCCC-
Confidence 99999999999888864 6999998 2789999998754 246789999999999999999999987654
Q ss_pred CCCCCeeEEEEeC----CCCCCcEEEee
Q 027975 183 IAGGQQEVCGVRE----KRADNVWLAAE 206 (216)
Q Consensus 183 ~~~~q~EV~c~~~----~~~~~~W~i~~ 206 (216)
...++||+|+.. .+.+++|.||-
T Consensus 260 -~~~~~eVs~yg~~~~~gd~ndlW~IEi 286 (604)
T 3uj4_A 260 -QHVFLRTTGRQSATSATSSKALWEVEV 286 (604)
T ss_dssp -EEEEEECCC--CTTCCCCGGGEEEEEE
T ss_pred -CcceEEEeecccccCCCCCCCeEEEEE
Confidence 456789999753 25688999984
No 8
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.85 E-value=2e-20 Score=174.04 Aligned_cols=161 Identities=16% Similarity=0.259 Sum_probs=123.8
Q ss_pred cCCCCeeeeCCEEEEEeCCCCCCeeeecccCCCC-CCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 30 SSETVEITYGTVLKLMHEKTKFRLHSHEVPYGSG-SGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 30 ~~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~-s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
......|.||+.|+|+|+.|+.|||++...+..+ ...+.|++.+...+++.+|+|.|... .+..+++|++||.|+|+|
T Consensus 95 ~~~~~~v~yG~~iqL~H~~S~~~L~~~~~~~s~~ek~a~~V~L~~~~~~~~s~f~I~p~~k-~r~~G~~V~~Gd~V~L~~ 173 (559)
T 2xoa_A 95 GGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASK-QRSEGEKVRVGDDLILVS 173 (559)
T ss_dssp --CCCBCBTTCEEEEEETTTCCEEEECSCCC----CCCEEEEEESSCCSSTTEEEEEESST-TSCTTSBCBTTCEEEEEE
T ss_pred ccCCCcEEEeeEEEEeecccCeEEEEcCcCcccccccceEEEEEecCCCCCcEEEEEcCcc-ccCCCCccccCCEEEEEE
Confidence 3447889999999999999999999987665332 12479999954489999999999874 556899999999999999
Q ss_pred CCCCCeEE-ecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecC---CceeccCCcEEEEEccCCceeccCCCCCCCCC
Q 027975 109 MRTRKWLH-SHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGS---GKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIA 184 (216)
Q Consensus 109 ~~T~~~L~-sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~---~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~ 184 (216)
..|++||| || +| +.+||+|. +.++.|+|..... ..+++.++.|||+|..|+.||+++... .
T Consensus 174 ~~t~~~LH~S~---~~--gs~eVt~~------d~nt~W~I~~~~~~~~~~~l~~GDvIRL~H~~t~~~L~~~~~~----s 238 (559)
T 2xoa_A 174 VSSERYLHLST---AS--GELQVDAS------FMQTLWNMNPICSCCEEGYVTGGHVLRLFHGHMDECLTISAAD----S 238 (559)
T ss_dssp TTTCCEEEEEC---------CEEEEE------SSCCCEEEEEEECCCCTTBCBTTCEEEEECC---CEEEECCTT----C
T ss_pred CCCCCcccccC---CC--CCeEEEec------cCCCeEEEEEcccCCccccccCCCEEEEEecCCCceeeccCCC----c
Confidence 99999999 55 23 56799995 5788999987543 457899999999999999999976432 3
Q ss_pred CCCeeEEEEeCC----CCCCcEEEee
Q 027975 185 GGQQEVCGVREK----RADNVWLAAE 206 (216)
Q Consensus 185 ~~q~EV~c~~~~----~~~~~W~i~~ 206 (216)
..|.||+|+... +.+++|.||-
T Consensus 239 ~~~~ev~~y~~~~~~~d~~~~W~VE~ 264 (559)
T 2xoa_A 239 DDQRRLVYYEGGAVCTHARSLWRLEP 264 (559)
T ss_dssp TTTTCBEEEECGGGGGSGGGCEEEEE
T ss_pred ccceEEEeecCCCcCCCCCceEEEEE
Confidence 568899998752 4588999974
No 9
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=99.69 E-value=6.8e-17 Score=144.06 Aligned_cols=174 Identities=14% Similarity=0.149 Sum_probs=88.1
Q ss_pred CCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecC---CCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEE
Q 027975 31 SETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPD---VDDANSYWIVKPILGASAKQGDTIKSGTIIRLQ 107 (216)
Q Consensus 31 ~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~---~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~ 107 (216)
....+|++||+|||.|..|+++||||....+. .-..+++|++. .+|.+++|+||.+... ...+..++.|+.|||+
T Consensus 6 ~~~~~v~~GdvIRL~H~~t~~~Lhs~~~~~~~-~v~~~~s~~~s~~~~~d~~s~W~IE~~~~~-~~~G~~~~~~~~fRLr 83 (381)
T 1n4k_A 6 NKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQ-HVFLRTTGRQSATSATSSKALWEVEVVQHD-PCRGGAGYWNSLFRFK 83 (381)
T ss_dssp -------CCCEEEEEETTTTEEEEEEECSSSE-EEEEECCCSSSGGGCCCGGGCEEEEECC--------------CEEEE
T ss_pred ccCCcccCCcEEEEEEcccCCeeecCCCCCcc-ceeeeccCccCCCCCCCCCCeEEEEEeccC-CCCCCceeeCCeEEEE
Confidence 45678999999999999999999999765421 11223454433 3688999999998532 2357789999999999
Q ss_pred eCCCCCeEEecCCCCCCCCceE-EE---EecC---CC--CCCCCCcEEEEEecC------------------CceeccCC
Q 027975 108 HMRTRKWLHSHLHASPISGNLE-IS---CFGG---EE--ESDTGDYWRVMIEGS------------------GKTWRQDQ 160 (216)
Q Consensus 108 H~~T~~~L~sh~~~~p~s~~~E-Vs---~~~~---~~--~~d~~~~W~IE~~~~------------------~~~~~~~s 160 (216)
|..|||||++|..........+ .. +... .. ..+....|.+..... ...++.++
T Consensus 84 H~~Tg~yL~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~l~~~~~~~d~~s~f~l~~~~~~~~d~~v~~~S 163 (381)
T 1n4k_A 84 HLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNS 163 (381)
T ss_dssp ETTTCCEEEEEEC-------------------------------CCEEEEEESCSCSGGGCEEEEC--------------
T ss_pred ECCCCceeeEEecCcccccccccccccccccccccccccCCCcCceEEEEecCccCCchhhhccCcccccccccccccCc
Confidence 9999999999965432111111 00 0000 00 001244555544321 12456677
Q ss_pred cEEEEEccCCceeccCCCCCC-CC-CCCCeeEEEEeCCCCCCcEEEee
Q 027975 161 RIRLQHVDTGGYLHSHPKKYQ-RI-AGGQQEVCGVREKRADNVWLAAE 206 (216)
Q Consensus 161 ~frL~H~~t~~yL~s~~~~lp-~~-~~~q~EV~c~~~~~~~~~W~i~~ 206 (216)
-|||+|+.||.+|++....+. .+ ...-.++.|.......+...|..
T Consensus 164 y~rl~H~~t~~Wl~~~~~~~~~~~~~~~l~~l~~~~~~e~~~aF~I~~ 211 (381)
T 1n4k_A 164 YVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPLKEDKEAFAIVP 211 (381)
T ss_dssp CBEEEEGGGTEEEEEEEEESCCSSSSCCEEEEEEESSCCSSCCEEEEE
T ss_pred eEEEEEcccCceEEeeccccCcccccceeeeeeeccceeeccceEEEE
Confidence 789999999999998654331 11 11223566766556666666644
No 10
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=99.54 E-value=2.4e-15 Score=134.11 Aligned_cols=85 Identities=22% Similarity=0.366 Sum_probs=60.1
Q ss_pred CCCeeeeCCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCC-CCCCCCCcEEEEEec----CCceeccCCcEEEEEcc
Q 027975 94 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGE-EESDTGDYWRVMIEG----SGKTWRQDQRIRLQHVD 168 (216)
Q Consensus 94 ~~~~v~~gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~-~~~d~~~~W~IE~~~----~~~~~~~~s~frL~H~~ 168 (216)
...+|++||+|||.|..|+++||+|+..++..-..|++|++.. ..+|++++|+||+.. .|..+++++.|||+|+.
T Consensus 7 ~~~~v~~GdvIRL~H~~t~~~Lhs~~~~~~~~v~~~~s~~~s~~~~~d~~s~W~IE~~~~~~~~G~~~~~~~~fRLrH~~ 86 (381)
T 1n4k_A 7 KDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLA 86 (381)
T ss_dssp ------CCCEEEEEETTTTEEEEEEECSSSEEEEEECCCSSSGGGCCCGGGCEEEEECC-------------CEEEEETT
T ss_pred cCCcccCCcEEEEEEcccCCeeecCCCCCccceeeeccCccCCCCCCCCCCeEEEEEeccCCCCCCceeeCCeEEEEECC
Confidence 4578999999999999999999999887643236788887754 367999999999974 36678899999999999
Q ss_pred CCceeccCCC
Q 027975 169 TGGYLHSHPK 178 (216)
Q Consensus 169 t~~yL~s~~~ 178 (216)
|||||+++..
T Consensus 87 Tg~yL~~~~~ 96 (381)
T 1n4k_A 87 TGHYLAAEVD 96 (381)
T ss_dssp TCCEEEEEEC
T ss_pred CCceeeEEec
Confidence 9999999843
No 11
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=99.03 E-value=2.7e-09 Score=86.51 Aligned_cols=108 Identities=15% Similarity=0.309 Sum_probs=79.2
Q ss_pred cCCCCeeeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEe--ecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEE
Q 027975 30 SSETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTG--FPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQ 107 (216)
Q Consensus 30 ~~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~--~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~ 107 (216)
....+.|.||..|+|+|..++.||..+..... .+..-.|+. .....++..+|+|.|.-+.. ..+++|+.||.|.|.
T Consensus 107 ~~~~r~v~YGq~IQLlH~~SnkyLtv~~~~~s-ek~~lrv~LgL~d~~~se~swF~I~P~yK~R-seGd~V~~GD~ViL~ 184 (217)
T 3im6_A 107 GGGHRTLLYGHAILLRHSYSGMYLCCLSTSRS-STDKLAFDVGLQEDTTGEACWWTIHPASKQR-SEGEKVRVGDDLILV 184 (217)
T ss_dssp ---CCBCBTTCEEEEEETTTCCEEEECSCC-------CCEEEEEESCCSSSTTEEEEEESSSCC-CTTCBCBTTCEEEEE
T ss_pred CCCCceEEeccEEEeeecccCcEEEEcCCCcc-cccCcEEEEEeccCCCCcceEEEEEccEeec-cCCCceeeCCEEEEE
Confidence 34467899999999999999999988765433 223344444 33336788999999986532 478999999999999
Q ss_pred eCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEE
Q 027975 108 HMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMI 149 (216)
Q Consensus 108 H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~ 149 (216)
++.++.|||.+.. .+..||.|. ..++.|.|-.
T Consensus 185 sv~s~~yLH~S~~----~g~~eVn~s------~~~T~W~i~p 216 (217)
T 3im6_A 185 SMSSERYLHLSYG----NSSWHVDAA------FQQTLWSVAP 216 (217)
T ss_dssp ETTTCCEEEEEEC----SSSEEEEEE------SSCCCEEEEE
T ss_pred ECCCCceEEeecC----CCceEEeee------cCCceeEEee
Confidence 9999999997633 367899986 3678899853
No 12
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=98.99 E-value=3.7e-09 Score=88.78 Aligned_cols=113 Identities=19% Similarity=0.280 Sum_probs=89.1
Q ss_pred cCCCCeeeeCCEEEEEeCCCCCCeeeeccc-CCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEe
Q 027975 30 SSETVEITYGTVLKLMHEKTKFRLHSHEVP-YGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQH 108 (216)
Q Consensus 30 ~~~~~~V~~Gd~I~L~h~~T~~~LhSh~~~-y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H 108 (216)
..-+..|.||..|+|+|+.|+.||-..... .........|++... .+++.+|+|.|...-. ..+++|+.||.|.|.+
T Consensus 124 k~~g~~v~YG~~iqLlHv~S~kyLt~~~~~~a~~ek~a~~v~L~~~-~se~s~F~I~P~~k~r-~eGd~V~~gD~V~l~~ 201 (246)
T 1xzz_A 124 KLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYKLR-SIGDSVVIGDKVVLNP 201 (246)
T ss_dssp HTTTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTSEEEEEESS-CCGGGCEEEEESSTTS-CTTSBCBTTCEEEEEE
T ss_pred hcCCCeEEeccEEEEEEcCCCcEEEEcCcCchhhcccceEEEEecC-CCCceEEEEeeceeec-ccCCceEECCEEEEEE
Confidence 455789999999999999999999876543 333334578888766 7889999999986532 4689999999999999
Q ss_pred CCCCCeEEecCCCCCCC-CceEEEEecCCCCCCCCCcEEEEEe
Q 027975 109 MRTRKWLHSHLHASPIS-GNLEISCFGGEEESDTGDYWRVMIE 150 (216)
Q Consensus 109 ~~T~~~L~sh~~~~p~s-~~~EVs~~~~~~~~d~~~~W~IE~~ 150 (216)
+.++.|||.+...++.. +..||.|. ..++.|+|...
T Consensus 202 ~~~~~~Lh~S~~~l~d~~~~~eVn~~------~~~T~Wki~l~ 238 (246)
T 1xzz_A 202 VNAGQPLHASSHQLVDNPGCNEVNSV------NCNTSWKIVLF 238 (246)
T ss_dssp SSSCSCEEEEEEECSSSSSCEEEEES------SCCCEEEEEEE
T ss_pred CCCCCcccccccccCCCCCCcEEEee------cCCceeEEeeh
Confidence 99999999876555533 58999884 35679999753
No 13
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=98.45 E-value=1.9e-06 Score=69.91 Aligned_cols=101 Identities=17% Similarity=0.251 Sum_probs=74.4
Q ss_pred CCCeeeeCCEEEEEeCCCCCeEEecCCCCCCCCceEEEE--ecCCCCCCCCCcEEEEEec----CCceeccCCcEEEEEc
Q 027975 94 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISC--FGGEEESDTGDYWRVMIEG----SGKTWRQDQRIRLQHV 167 (216)
Q Consensus 94 ~~~~v~~gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~--~~~~~~~d~~~~W~IE~~~----~~~~~~~~s~frL~H~ 167 (216)
..+.|.+|..|.|.|+.+++||..+...+.......|.. ..+ .+....+|+|...- +|+.+..++.+.|.++
T Consensus 109 ~~r~v~YGq~IQLlH~~SnkyLtv~~~~~sek~~lrv~LgL~d~--~~se~swF~I~P~yK~RseGd~V~~GD~ViL~sv 186 (217)
T 3im6_A 109 GHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQED--TTGEACWWTIHPASKQRSEGEKVRVGDDLILVSM 186 (217)
T ss_dssp -CCBCBTTCEEEEEETTTCCEEEECSCC------CCEEEEEESC--CSSSTTEEEEEESSSCCCTTCBCBTTCEEEEEET
T ss_pred CCceEEeccEEEeeecccCcEEEEcCCCcccccCcEEEEEeccC--CCCcceEEEEEccEeeccCCCceeeCCEEEEEEC
Confidence 357899999999999999999999876433333333333 222 23578999998863 4788899999999999
Q ss_pred cCCceeccCCCCCCCCCCCCeeEEEEeCCCCCCcEEEe
Q 027975 168 DTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAA 205 (216)
Q Consensus 168 ~t~~yL~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~i~ 205 (216)
+++.||+.+.. .+-.||+|. ...+.|.|.
T Consensus 187 ~s~~yLH~S~~------~g~~eVn~s---~~~T~W~i~ 215 (217)
T 3im6_A 187 SSERYLHLSYG------NSSWHVDAA---FQQTLWSVA 215 (217)
T ss_dssp TTCCEEEEEEC------SSSEEEEEE---SSCCCEEEE
T ss_pred CCCceEEeecC------CCceEEeee---cCCceeEEe
Confidence 99999997632 356799997 467889985
No 14
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=98.44 E-value=1e-06 Score=73.88 Aligned_cols=107 Identities=19% Similarity=0.330 Sum_probs=82.5
Q ss_pred CCCeeeeCCEEEEEeCCCCCeEEecCCC-CCCC-CceEEEEecCCCCCCCCCcEEEEEec----CCceeccCCcEEEEEc
Q 027975 94 QGDTIKSGTIIRLQHMRTRKWLHSHLHA-SPIS-GNLEISCFGGEEESDTGDYWRVMIEG----SGKTWRQDQRIRLQHV 167 (216)
Q Consensus 94 ~~~~v~~gd~IrL~H~~T~~~L~sh~~~-~p~s-~~~EVs~~~~~~~~d~~~~W~IE~~~----~~~~~~~~s~frL~H~ 167 (216)
.+.+|.+|..|.|.|+.+++||...... +-.. ....|.-.. .+..+++|+|...- .|+.+..++.+.|.++
T Consensus 126 ~g~~v~YG~~iqLlHv~S~kyLt~~~~~~a~~ek~a~~v~L~~---~~se~s~F~I~P~~k~r~eGd~V~~gD~V~l~~~ 202 (246)
T 1xzz_A 126 LGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDE---AGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPV 202 (246)
T ss_dssp TTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTSEEEEEES---SCCGGGCEEEEESSTTSCTTSBCBTTCEEEEEES
T ss_pred CCCeEEeccEEEEEEcCCCcEEEEcCcCchhhcccceEEEEec---CCCCceEEEEeeceeecccCCceEECCEEEEEEC
Confidence 4678999999999999999999986533 2222 366777643 34678899998854 4777788999999999
Q ss_pred cCCceeccCCCCCCCCCCCCeeEEEEeCCCCCCcEEEeee
Q 027975 168 DTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEG 207 (216)
Q Consensus 168 ~t~~yL~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~i~~~ 207 (216)
.++.||+++...+++ -.+-.||+|. ...+.|+|.-.
T Consensus 203 ~~~~~Lh~S~~~l~d-~~~~~eVn~~---~~~T~Wki~l~ 238 (246)
T 1xzz_A 203 NAGQPLHASSHQLVD-NPGCNEVNSV---NCNTSWKIVLF 238 (246)
T ss_dssp SSCSCEEEEEEECSS-SSSCEEEEES---SCCCEEEEEEE
T ss_pred CCCCcccccccccCC-CCCCcEEEee---cCCceeEEeeh
Confidence 999999988666765 3566899884 56779999643
No 15
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=95.76 E-value=0.45 Score=36.07 Aligned_cols=139 Identities=13% Similarity=0.170 Sum_probs=82.6
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
+...+|++..+|..|-.....-..+ ..|..+...+..+-.|.+.... +..++|++..++++|-..
T Consensus 26 ~g~y~i~n~~sg~cLdv~~~~~~~g---~~v~~~~c~~~~~Q~W~~~~~~------------~g~y~i~~~~sg~cLdv~ 90 (165)
T 3pg0_A 26 DGYYKLVARHSGKALDVENASTSDG---ANVIQYSYSGGDNQQWRLVDLG------------DGYYKLVARHSGKALDVE 90 (165)
T ss_dssp CCEEEEEETTTCCEEEEGGGCCSTT---CBEEEECCCCCGGGCEEEEEEE------------TTEEEEEETTTCCEEEEG
T ss_pred CCEEEEEECCCCCEEEeCCCCCCCC---CEEEEECCCCCccceEEEEECC------------CCEEEEEECCCCCEEEeC
Confidence 6678999999999998754332333 2343443323456789988652 246899999999999865
Q ss_pred CCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeEEEEeCCCC
Q 027975 119 LHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRA 198 (216)
Q Consensus 119 ~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV~c~~~~~~ 198 (216)
+... ..+ ..|.-+.. .+..+..|+++...+ ..|+|++..+|++|-....... .+..=.--.|.. ..
T Consensus 91 ~~~~-~~G-~~v~~~~c--~~~~~Q~W~~~~~g~-------g~~~i~~~~sg~cLdv~~~~~~-~G~~v~~~~c~g--~~ 156 (165)
T 3pg0_A 91 NAST-SDG-ANVIQYSY--SGGDNQQWRLVDLGD-------GYYKLVARHSGKALDVENASTS-DGANVIQYSYSG--GD 156 (165)
T ss_dssp GGCC-STT-CBEEEECC--CCCGGGCEEEEECSS-------SCEEEEETTTCCEEEEGGGCCS-TTCBEEEECCCC--CG
T ss_pred CCCC-CCC-CEEEEEcC--CCCCccEEEEEECCC-------CEEEEEECCCCcEEEcCCCCCC-CCCEEEEeCCCC--Cc
Confidence 4321 112 22333322 124677899886543 4589999999999976543211 111111113432 45
Q ss_pred CCcEEEee
Q 027975 199 DNVWLAAE 206 (216)
Q Consensus 199 ~~~W~i~~ 206 (216)
+-.|.++.
T Consensus 157 nQ~W~~~~ 164 (165)
T 3pg0_A 157 NQQWRLVD 164 (165)
T ss_dssp GGCEEEEE
T ss_pred cceEEEEE
Confidence 66898864
No 16
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=90.49 E-value=3.9 Score=37.05 Aligned_cols=138 Identities=10% Similarity=0.173 Sum_probs=83.6
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
|...+|++..+|..|-.-...-..+ ..|..+...+..+-.|.+..... ..++|++..++++|-..
T Consensus 360 ~~~y~i~n~~sg~cLdv~~~~~~~G---~~v~~~~c~g~~~Q~W~~~~~g~------------g~y~i~n~~sg~cLdv~ 424 (526)
T 3vsf_A 360 TTRYKLVNKNSGKVLDVLDGSVDNA---AQIVQWTDNGSLSQQWYLVDVGG------------GYKKIVNVKSGRALDVK 424 (526)
T ss_dssp CCCEEEEETTTCCEEEEGGGCCSTT---EEEEEECCCCCGGGCEEEEECST------------TEEEEEESSSCCEEEEG
T ss_pred CccEEEEECCCCceEEecCCCCCCC---cEEEEccCCCCcceEEEEEECCC------------CEEEEEECCCCCEEEeC
Confidence 6778999999999998754332222 34443433244566799986532 46899999999999765
Q ss_pred CCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeE---EEEeC
Q 027975 119 LHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEV---CGVRE 195 (216)
Q Consensus 119 ~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV---~c~~~ 195 (216)
+... ..+ ..|.-+.. .+..+..|+++...+ ..++|++..+|++|-..+.... .+ ..| .|..
T Consensus 425 ~~~~-~~G-~~v~~~~c--~g~~nQ~W~~~~~g~-------g~y~i~~~~sg~cLdv~~~s~~---~G-~~v~~~~c~g- 488 (526)
T 3vsf_A 425 DESK-EDG-GVLIQYTS--NGGYNQHWKFTDIGD-------GYYKISSRHCGKLIDVRKWSTE---DG-GIIQQWSDAG- 488 (526)
T ss_dssp GGCC-STT-EEEEEECC--CCCGGGCEEEEEEET-------TEEEEEESSSCCEEEEGGGCCS---TT-EEEEEECCCC-
T ss_pred CCCC-CCC-CEEEEecC--CCCcccEEEEEECCC-------CeEEEEECCCCCEEEeCCCCCC---CC-CEEEEEcCCC-
Confidence 4321 112 22333322 124677899887644 3589999999999976433211 11 122 3432
Q ss_pred CCCCCcEEEeeee
Q 027975 196 KRADNVWLAAEGV 208 (216)
Q Consensus 196 ~~~~~~W~i~~~~ 208 (216)
..+-.|.++...
T Consensus 489 -~~nQ~W~~~~v~ 500 (526)
T 3vsf_A 489 -GTNQHWKLVLVS 500 (526)
T ss_dssp -CGGGCEEEEEC-
T ss_pred -CccCeEEEEecC
Confidence 456689887644
No 17
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=90.15 E-value=1.1 Score=40.83 Aligned_cols=124 Identities=10% Similarity=0.166 Sum_probs=78.3
Q ss_pred EEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecCCC
Q 027975 42 LKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHA 121 (216)
Q Consensus 42 I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~~~ 121 (216)
+=|+|.. ++||..-.+.+. |++....---.-.|+++...+.. .++.|+|+ ...|+||.+...
T Consensus 14 ~gl~~~~-~~ylt~e~fg~~-------vna~~~~l~~rQvw~l~~~~~~~--------~~~~~~lk-s~~G~yL~~d~~- 75 (493)
T 3llp_A 14 FGLINCG-NKYLTAEAFGFK-------VNASASSLKKKQIWTLEQPPDEA--------GSAAVCLR-SHLGRYLAADKD- 75 (493)
T ss_dssp EEEECTT-SCEEEECSGGGC-------EEEEESSCCGGGCEEEC-----C--------CCCCBCEE-CTTSCEEEECTT-
T ss_pred EEEEecC-CceEEeeccCCE-------EEeccCCccceEEEEEEecCCCC--------CccEEEEe-cCCCcEeecCCC-
Confidence 4477754 599987644432 33322211122369998664321 12457777 458999988644
Q ss_pred CCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeEEEEeC-CCCCC
Q 027975 122 SPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE-KRADN 200 (216)
Q Consensus 122 ~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV~c~~~-~~~~~ 200 (216)
.-|+|..+ ..++...|.|+...+ ..+.|+...+|.||.++.- .|.|+.. .....
T Consensus 76 ------G~v~~~~~--~~~~~~~f~~~~~~d-------G~w~lq~~~~g~yl~~~~~----------~~~c~~~~~~~~~ 130 (493)
T 3llp_A 76 ------GNVTCERE--VPGPDCRFLIVAHDD-------GRWSLQSEAHRRYFGGTED----------RLSCFAQTVSPAE 130 (493)
T ss_dssp ------SCEEEEES--SCCGGGCEEEEECTT-------SEEEEEETTTCCEEEEEBT----------EEEEEESSCCGGG
T ss_pred ------CcEEeCcc--cCCCCceEEEEECCC-------CeEEEEEcccCceecCCCc----------eEEEEeccCCccc
Confidence 55888764 346778899987644 4688999999999998743 5688875 56788
Q ss_pred cEEEeeee
Q 027975 201 VWLAAEGV 208 (216)
Q Consensus 201 ~W~i~~~~ 208 (216)
+|.|.--.
T Consensus 131 ~w~~~la~ 138 (493)
T 3llp_A 131 KWSVHIAM 138 (493)
T ss_dssp CEEEEECS
T ss_pred eeeeeecc
Confidence 99885443
No 18
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=90.14 E-value=1.9 Score=33.36 Aligned_cols=61 Identities=20% Similarity=0.236 Sum_probs=43.5
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..+|+-..++.+|..+. ...|.|..+ .++..+.|.|+.. ..+..|+|+.+.|+.||..+..
T Consensus 31 ~~qLY~rt~g~~LqI~~-------dG~V~Gt~~--~~~~~s~L~~~s~------~~g~~V~I~gv~s~~YLcMn~~ 91 (164)
T 2fdb_M 31 TYQLYSRTSGKHVQVLA-------NKRINAMAE--DGDPFAKLIVETD------TFGSRVRVRGAETGLYICMNKK 91 (164)
T ss_dssp EEEEEETTTSSEEEECT-------TSCEEEEEC--TTCGGGCEEEEEE------ETTTEEEEEETTTCCEEEECTT
T ss_pred EEEEEEccCCeEEEECC-------CCcEEeecc--CCCcceEEEEEEe------ccceEEEEEEeccCcEEEEcCC
Confidence 35555555588998763 356888764 2356678888865 3445799999999999998754
No 19
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=89.14 E-value=2.1 Score=32.48 Aligned_cols=63 Identities=16% Similarity=0.107 Sum_probs=45.3
Q ss_pred eCCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 100 SGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 100 ~gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
.+...||+....+.+|..+.. .-|.+..+ ..+..+.|.|+... . ..|+|+.+.|+.||..+..
T Consensus 17 ~~r~~rLY~r~~g~~LqI~~d-------G~V~Gt~~--~~~~~s~l~i~sv~------~-G~V~I~gv~s~~YLcMn~~ 79 (146)
T 1bfg_A 17 FKDPKRLYCKNGGFFLRIHPD-------GRVDGVRE--KSDPHIKLQLQAEE------R-GVVSIKGVSANRYLAMKED 79 (146)
T ss_dssp --CCEEEEETTTTEEEEECTT-------SCEEEECC--TTCGGGCEEEEECS------T-TEEEEEETTTTEEEEECTT
T ss_pred cCccEEEEEcCCCEEEEECCC-------CeEEeecC--CCCCceEEEEEecc------C-CEEEEEEcccCcEEEEcCC
Confidence 356788988755899987632 46888764 23567789887652 2 3899999999999998744
No 20
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=88.44 E-value=4.3 Score=30.77 Aligned_cols=60 Identities=15% Similarity=0.113 Sum_probs=44.7
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..+|+-...+.+|..+. ...|.+..+ ..+..+.|.|+...- ..|+|+.+.|+.||..+..
T Consensus 17 ~~qLY~r~~g~~LqI~~-------dG~V~Gt~~--~~~~~s~l~i~sv~~-------G~V~I~gv~s~~YLcMn~~ 76 (146)
T 1rg8_A 17 PKLLYCSNGGHFLRILP-------DGTVDGTRD--RSDQHIQLQLSAESV-------GEVYIKSTETGQYLAMDTD 76 (146)
T ss_dssp CEEEEETTTTEEEEECT-------TSCEEEECC--TTCTTCCEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred EEEEEEcCCCEEEEECC-------CCcEeeecc--CCCCceEEEEEeecC-------CeEEEEEcccCcEEEECCC
Confidence 57777765688998753 356888764 246788999887532 3899999999999998754
No 21
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=88.40 E-value=6.1 Score=33.39 Aligned_cols=116 Identities=9% Similarity=0.263 Sum_probs=72.3
Q ss_pred EEEEEeCCCCCCeeeecccCCCCCCccEEEeec---CCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEe
Q 027975 41 VLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFP---DVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHS 117 (216)
Q Consensus 41 ~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~---~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~s 117 (216)
.-+|+++.+|..|-........| ..|..+. .....+-.|+++.... .+...+|+++.++++|-.
T Consensus 7 ~Y~I~N~~SGk~LDV~g~stanG---a~Vqqw~~~g~ng~~nQqW~~~~~~G----------~~G~Y~I~n~~SGkcLDV 73 (293)
T 3ef2_A 7 IYHIENAGVPSAIDLKDGSSSDG---TPIVGWQFTPDTINWHQLWLAEPIPN----------VADTFTLCNLFSGTYMDL 73 (293)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTT---EEEEEECCCTTSCCTTCEEEEEECTT----------STTEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEcCCCCCCCC---cEEEEeecCCCCCCccEEEEEeeccC----------CCceEEEEECCCCCEEec
Confidence 66899999999998765444433 3444443 2234677899997421 124689999999999976
Q ss_pred cCCCCCCCCceEEEEecCC-CCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCC
Q 027975 118 HLHASPISGNLEISCFGGE-EESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 177 (216)
Q Consensus 118 h~~~~p~s~~~EVs~~~~~-~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~ 177 (216)
.... .-.| -.|.-+... .....+..|+|+.... +..++|++..+|++|-...
T Consensus 74 ~~~s-tanG-t~V~qw~~~~~~~g~nQqW~l~~~~g------~G~y~I~n~~SGk~LDV~g 126 (293)
T 3ef2_A 74 YNGS-SEAG-TAVNGWQGTAFTTNPHQLWTIKKSSD------GTSYKIQNYGSKTFVDLVN 126 (293)
T ss_dssp GGGC-CSTT-EEEEEECCCTTCCCGGGCEEEEECTT------SSSEEEEETTTCCEEEEGG
T ss_pred CCCC-CCCC-CEEEEeccCCCCCCCCcEEEEEEeCC------CCEEEEEECCCCcEEEeCC
Confidence 5322 1122 223333200 0112377899886522 1368999999999997543
No 22
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=88.01 E-value=3.2 Score=31.38 Aligned_cols=61 Identities=18% Similarity=0.224 Sum_probs=45.3
Q ss_pred CCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 101 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 101 gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
|.+.||+-. ++.+|..+.. ..|.+..+. .+..+.|.|+.... ..|+|+.+.|+.||..+..
T Consensus 10 g~~~~Ly~r-~g~~LqI~~d-------G~V~Gt~~~--~~~~sile~~sv~~-------g~V~I~gv~s~~YLcMn~~ 70 (144)
T 1q1u_A 10 GIVTRLFSQ-QGYFLQMHPD-------GTIDGTKDE--NSDYTLFNLIPVGL-------RVVAIQGVKASLYVAMNGE 70 (144)
T ss_dssp CEEEEEEET-TTEEEEECTT-------SCEEEESCT--TSGGGCEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred CceEEEEEc-CCeEEEECCC-------CcEeeecCC--CCCceeEEEEeccC-------CEEEEEEcccCcEEEEcCC
Confidence 667788887 5999987633 568887642 35567898876532 4689999999999998754
No 23
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=87.32 E-value=2.7 Score=31.60 Aligned_cols=60 Identities=13% Similarity=0.168 Sum_probs=41.7
Q ss_pred EEEEEeC--CCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 103 IIRLQHM--RTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 103 ~IrL~H~--~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
.+|+++. .++.+|..+. ...|.+..+ ..+..+.|.|+... .+ .|+|+.+.|+.||..+..
T Consensus 9 ~~R~~~LY~r~g~~L~I~~-------dG~V~Gt~~--~~~~~s~l~~~sv~------~g-~V~I~gv~s~~YLcmn~~ 70 (140)
T 1qql_A 9 DIRVRRLFCRTQWYLRIDK-------RGKVKGTQE--MRNSYNIMEIRTVA------VG-IVAIKGVESEYYLAMNKE 70 (140)
T ss_dssp CEEEECCEETTTEEEEECT-------TCCEEEESC--TTCSTTCEEEEEEE------TT-EEEEEETTTCCCCEECTT
T ss_pred eeEEEEEEecCCeEEEECC-------CCeEEeecC--CCCCceEEEEEeec------CC-EEEEEEcccCcEEEEcCC
Confidence 3444443 3477887653 356888764 23678899988753 33 799999999999998744
No 24
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=87.00 E-value=4.6 Score=34.07 Aligned_cols=137 Identities=13% Similarity=0.214 Sum_probs=79.0
Q ss_pred EEEEEeCCCC-CCeeeecccCCCCCC-ccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 41 VLKLMHEKTK-FRLHSHEVPYGSGSG-QQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 41 ~I~L~h~~T~-~~LhSh~~~y~~~s~-~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
.-+|++..+| ..|-.-...-..|.. -|+=+|.. +..+-.|+++... .|...+|+++.+++.|-..
T Consensus 8 ~Y~I~N~~SGnKcLDV~g~STanGt~~Vqqw~c~n--G~~nQqW~l~~~G-----------~G~~Y~I~N~~SGKcLDV~ 74 (286)
T 3phz_A 8 IYYIASAYVANTRLALSEDSSANKSPDVIISSDAV--DPLNNLWLIEPVG-----------EADTYTVRNAFAGSYMDLA 74 (286)
T ss_dssp EEEEEESSSTTEEEEECC----CCCCBEEEEETTC--CCGGGCEEEEECS-----------STTEEEEEETTTCCEEEEG
T ss_pred EEEEEEcCCCCeEEEcCCCCCCCCCceEEEEeCCC--CChHHEEEEEECC-----------CCcEEEEEECCCCcEEEeC
Confidence 5689999998 888765433334443 33333322 3456679998743 2457899999999999765
Q ss_pred CCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeEEEEeC--C
Q 027975 119 LHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE--K 196 (216)
Q Consensus 119 ~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV~c~~~--~ 196 (216)
.... -. .-.|--+.. .+.++..|+++.. +..++|++..+|++|-.....-.. .+- |.-... .
T Consensus 75 g~sT-ad-Ga~V~qW~~--nGg~NQqW~l~~~--------~G~y~I~n~~SGkcLDV~~gstta--nGa--V~qWt~~tg 138 (286)
T 3phz_A 75 GHAA-TD-GTAIIGYRP--TGGDNQKWIISQI--------NDVWKIKSKETGTFVTLLNGDGGG--TGT--VVGWQNITN 138 (286)
T ss_dssp GGCC-ST-TEEEEEECC--CCCGGGCEEEEES--------SSCEEEEETTTCCEEEEETC---C--CCE--EEEESCCCS
T ss_pred CCcC-CC-CCeEEEeCC--CCChhcEEEEEcC--------CCeEEEEECCCCcEEEeCCCCcCC--Cce--EEEccCCCC
Confidence 4321 11 223333332 2456788998754 246899999999999843221101 221 222221 2
Q ss_pred CCCCcEEEee
Q 027975 197 RADNVWLAAE 206 (216)
Q Consensus 197 ~~~~~W~i~~ 206 (216)
..+-.|.++.
T Consensus 139 g~NQqW~~~~ 148 (286)
T 3phz_A 139 NTSQNWTFQK 148 (286)
T ss_dssp SCTTCEEEEE
T ss_pred CccCcEEEEE
Confidence 4567898864
No 25
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=86.63 E-value=7.9 Score=28.58 Aligned_cols=102 Identities=23% Similarity=0.315 Sum_probs=67.5
Q ss_pred EEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecCC
Q 027975 41 VLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLH 120 (216)
Q Consensus 41 ~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~~ 120 (216)
.|-|+-..+|.+|..+ |.| .|.+.....+....|.|.++. .| +|+|+-+.|+.||.....
T Consensus 7 ~~~~~~~~~g~~L~I~----~dG----~V~Gt~~~~~~~s~l~~~~v~-----------~G-~V~I~g~~sg~yL~m~~~ 66 (132)
T 3q7x_A 7 EVLLRSTETGQFLRIN----PDG----TVDGTRDRSDPGIQFQISPEG-----------NG-EVLLRSTETGQFLRINPD 66 (132)
T ss_dssp CEEEEETTTCCEEEEC----TTS----BEEEECCTTCGGGCEEEEEEE-----------TT-EEEEEETTTCCEEEECTT
T ss_pred hheeeeccCcEEEEEC----CCC----cEEeecCCCCCCcEEEEEecc-----------cC-EEEEEEEcccEEEEECCC
Confidence 3667888889988886 333 455655434667777777553 23 799999999999987532
Q ss_pred CCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 121 ASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 121 ~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..|.+... ..+....+.+...+. ..+.++.+.+|.||..++.
T Consensus 67 -------G~v~Gs~~--~s~ec~flE~~~~~~-------g~v~ikg~~sg~YLamnk~ 108 (132)
T 3q7x_A 67 -------GTVDGTRD--RSDPGIQFQISPEGN-------GEVLLRSTETGQFLRINPD 108 (132)
T ss_dssp -------SBEEEECC---CCGGGCEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred -------CCEeeccC--CCCCceeEEEEeecC-------cEEEEEeccCCeEEEECCC
Confidence 34555542 123334555544322 4578889999999998754
No 26
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=85.38 E-value=8.5 Score=29.42 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=46.7
Q ss_pred CCEEEEEeCC--CCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 101 GTIIRLQHMR--TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 101 gd~IrL~H~~--T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
|..++|+-.. |+.+|..+. ...|.|..+ .+..+.|.|+.... ..|+|+.+.|+.||..+..
T Consensus 13 ~~~~~LY~~~~rtg~~LqI~~-------dG~V~Gt~d---~~~~s~Lei~sv~~-------g~V~Ikgv~s~~YLcMn~~ 75 (155)
T 2p39_A 13 GGLIHLYTATARNSYHLQIHK-------NGHVDGAPH---QTIYSALMIRSEDA-------GFVVITGVMSRRYLCMDFR 75 (155)
T ss_dssp TTCEEEECTTSSSCCEEEECT-------TSCEEEESS---CCTTTCEEEEECGG-------GEEEEEETTTTEEEEECTT
T ss_pred CCEEEEEEccCCCceEEEECC-------CCcEeCccC---CCCcEEEEEEeecC-------CEEEEEEeccCcEEEECCC
Confidence 6688898864 899998763 356888764 36788898876532 4799999999999998754
No 27
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=85.06 E-value=10 Score=28.50 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=41.9
Q ss_pred EEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 104 IRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 104 IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
++|+-. |+.+|..+. ...|.+..+ ..+..+.|.|+.. ..+ .|+|+.+.|+.||..+..
T Consensus 17 ~~LY~~-~g~~LqI~~-------dG~V~Gt~~--~~~~~s~l~~~sv------~~g-~V~I~gv~s~~YLcmn~~ 74 (145)
T 1nun_A 17 RKLFSF-TKYFLKIEK-------NGKVSGTKK--ENCPYSILEITSV------EIG-VVAVKAINSNYYLAMNKK 74 (145)
T ss_dssp EEEEET-TSCEEEECT-------TSCEEEECC--SCCTTSCEEEEEE------ETT-EEEEEETTTTEEEEECTT
T ss_pred EEEEEc-CCeEEEECC-------CCcEeeecC--CCCCceeEEEEEe------cCC-eEEEEEcccCcEEEEcCC
Confidence 555555 488888763 246888764 2467888998765 233 799999999999998754
No 28
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=82.27 E-value=13 Score=27.37 Aligned_cols=58 Identities=10% Similarity=-0.017 Sum_probs=40.8
Q ss_pred EEEEeCCC-CCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 104 IRLQHMRT-RKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 104 IrL~H~~T-~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
.+|.-... +.+|..+.. ..|.+..+. .+ .+.|.|+... . ..|+|+.+.|+.||..+..
T Consensus 6 ~~LY~~~~~g~~LqI~~d-------G~V~Gt~~~--~~-~s~l~~~sv~------~-g~V~I~gv~s~~YLcmn~~ 64 (128)
T 1ijt_A 6 RRLYCNVGIGFHLQALPD-------GRIGGAHAD--TR-DSLLELSPVE------R-GVVSIFGVASRFFVAMSSK 64 (128)
T ss_dssp EEEEECSTTCEEEEECTT-------SCEEEESSC--CG-GGCEEEEEEE------T-TEEEEEETTTTEEEEECTT
T ss_pred EEEEEecCCCeEEEECCC-------CcEecccCC--Cc-cceEEEEecc------C-CEEEEEEcccCcEEEEcCC
Confidence 45655544 788887643 568887642 23 7788887653 2 3799999999999998754
No 29
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=81.43 E-value=15 Score=27.61 Aligned_cols=108 Identities=8% Similarity=0.091 Sum_probs=69.7
Q ss_pred EEEEEeCC-CCCCeeeecccCCCCCCccEEEeecCCCCCCCc----EEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeE
Q 027975 41 VLKLMHEK-TKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSY----WIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWL 115 (216)
Q Consensus 41 ~I~L~h~~-T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~----W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L 115 (216)
.-+|+++. +|..|-.....-.. .-.|..+...+-.|-. |++++..+.. ....+|+++ ++||
T Consensus 6 ~Y~I~n~~~sgk~lDv~~~sta~---Gt~V~~w~~~g~~nQ~~~~~W~~~~~~~~~---------~g~y~i~n~--G~~L 71 (148)
T 3nbc_A 6 TYNITNVAYTNRLIDLTGSNPAE---NTLIIGHHLNKTPSGYGNQQWTLVQLPHTT---------IYTMQAVNP--QSYV 71 (148)
T ss_dssp EEEEEESSCTTCEEEEGGGCCST---TEEEEEECCCSTTTCCGGGCEEEEECTTSS---------EEEEEESSS--CCEE
T ss_pred EEEEEEecCCCCeEECCCCcCCC---CcEEEEeCCCCChhheeecEEEEEECCCcc---------cceEEEEEC--CcEE
Confidence 37899999 99999886543333 3466677654556777 9999764311 145788888 8999
Q ss_pred EecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccC
Q 027975 116 HSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSH 176 (216)
Q Consensus 116 ~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~ 176 (216)
-.... ..-.+ ..|.... .+..|+|+....+ ..+||+...+++.|-..
T Consensus 72 dv~~~-~ta~G-t~v~~~~------~~q~W~i~~~~~~------G~y~I~~~~sg~~Ldv~ 118 (148)
T 3nbc_A 72 RVRDD-NLVDG-AALVGSQ------QPTPVSIESAGNS------GQFRIKIPNLGLALTLP 118 (148)
T ss_dssp EEGGG-CCSTT-CBEEEES------SCCCEEEEECSST------TCEEEECTTSSEEEECC
T ss_pred EccCC-CCCCC-cEEecCC------CCcEEEEEEccCC------CeEEEEeCCCCeEEEee
Confidence 65432 11122 3344432 3568998764321 25889999999988644
No 30
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=77.90 E-value=20 Score=27.04 Aligned_cols=76 Identities=11% Similarity=0.182 Sum_probs=50.0
Q ss_pred CEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCC
Q 027975 102 TIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQ 181 (216)
Q Consensus 102 d~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp 181 (216)
+.|+|+-. .++||..... .-|+|... ...+...|.++.. +..+.|++ .+|+||.....
T Consensus 72 ~~v~LRs~-~GkYLs~~~~-------G~v~a~a~--~~g~~E~F~l~~~--------~G~~aLra-~nG~yl~~~~~--- 129 (155)
T 2yug_A 72 SRIALKSG-YGKYLGINSD-------GLVVGRSD--AIGPREQWEPVFQ--------DGKMALLA-SNSCFIRCNEA--- 129 (155)
T ss_dssp SCEEEEET-TSCBEEECSS-------SBEEECCS--SCCTTTBEEEECS--------TTCCEEEE-TTSCBEEECSS---
T ss_pred CEEEEEeC-CCCEEEecCC-------CcEEeccC--CCCCCCEEEEEEE--------CCEEEEEe-CCCCEEEEcCC---
Confidence 46888875 4999987532 24666543 2347788987753 34678999 68999998642
Q ss_pred CCCCCCeeEEEEeC-CCCCCcEEEe
Q 027975 182 RIAGGQQEVCGVRE-KRADNVWLAA 205 (216)
Q Consensus 182 ~~~~~q~EV~c~~~-~~~~~~W~i~ 205 (216)
+ .+.|... ......|.++
T Consensus 130 ----g--~l~a~a~~~~~~E~f~v~ 148 (155)
T 2yug_A 130 ----G--DIEAKNKTAGEEEMIKIR 148 (155)
T ss_dssp ----S--CEEECCSCCCTTTCCEEE
T ss_pred ----C--cEEEecCCCCCCcEEEEE
Confidence 1 3667543 3456677775
No 31
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=77.84 E-value=17 Score=32.97 Aligned_cols=111 Identities=17% Similarity=0.243 Sum_probs=75.3
Q ss_pred CEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 40 TVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 40 d~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
+.|+|+.. .|+||-.- +.=.|+|-....+....|.|++..+ -...|+....++||.+++
T Consensus 58 ~~~~lks~-~G~yL~~d--------~~G~v~~~~~~~~~~~~f~~~~~~d------------G~w~lq~~~~g~yl~~~~ 116 (493)
T 3llp_A 58 AAVCLRSH-LGRYLAAD--------KDGNVTCEREVPGPDCRFLIVAHDD------------GRWSLQSEAHRRYFGGTE 116 (493)
T ss_dssp CCBCEECT-TSCEEEEC--------TTSCEEEEESSCCGGGCEEEEECTT------------SEEEEEETTTCCEEEEEB
T ss_pred cEEEEecC-CCcEeecC--------CCCcEEeCcccCCCCceEEEEECCC------------CeEEEEEcccCceecCCC
Confidence 44555533 35666553 2335777666567777898886632 368899999999998763
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeEEEEeC
Q 027975 120 HASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE 195 (216)
Q Consensus 120 ~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV~c~~~ 195 (216)
..|+|+... -.+...|.+.. ..-..+.|+++...+|.+.+.. ++.||.+...
T Consensus 117 --------~~~~c~~~~--~~~~~~w~~~l-------a~hpqv~l~s~~r~~y~~l~~~-------~~~~~~~d~~ 168 (493)
T 3llp_A 117 --------DRLSCFAQT--VSPAEKWSVHI-------AMHPQVNIYSVTRKRYAHLSAR-------PADEIAVDRD 168 (493)
T ss_dssp --------TEEEEEESS--CCGGGCEEEEE-------CSCCEEEEEETTTTEEEEEEC---------CCEEEEEES
T ss_pred --------ceEEEEecc--CCccceeeeee-------ccCcEEEEeecccceeEEcCCC-------CCCeEEECCC
Confidence 468898742 23567898765 4557789999999999987532 1457777765
No 32
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=77.46 E-value=19 Score=26.69 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=54.8
Q ss_pred CEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 40 TVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 40 d~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
...+|++..++..|-........| ..|..+...+..+-.|+++.... ..++|++..++..|-..+
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~~~G---~~v~~~~c~~~~~Q~W~~~~~g~------------g~~~i~~~~sg~cLdv~~ 138 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENASTSDG---ANVIQYSYSGGDNQQWRLVDLGD------------GYYKLVARHSGKALDVEN 138 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCCSTT---CBEEEECCCCCGGGCEEEEECSS------------SCEEEEETTTCCEEEEGG
T ss_pred CEEEEEECCCCCEEEeCCCCCCCC---CEEEEEcCCCCCccEEEEEECCC------------CEEEEEECCCCcEEEcCC
Confidence 478899999998888754433333 23433443244667899986532 348899999999997754
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCcEEEEE
Q 027975 120 HASPISGNLEISCFGGEEESDTGDYWRVMI 149 (216)
Q Consensus 120 ~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~ 149 (216)
... ..+ ..|..+... +..+-.|+++.
T Consensus 139 ~~~-~~G-~~v~~~~c~--g~~nQ~W~~~~ 164 (165)
T 3pg0_A 139 AST-SDG-ANVIQYSYS--GGDNQQWRLVD 164 (165)
T ss_dssp GCC-STT-CBEEEECCC--CCGGGCEEEEE
T ss_pred CCC-CCC-CEEEEeCCC--CCccceEEEEE
Confidence 321 112 223333321 34567798864
No 33
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=72.69 E-value=26 Score=27.17 Aligned_cols=59 Identities=17% Similarity=0.055 Sum_probs=41.8
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
.++|+-. |+.+|..+.. .-|.+..+ ..+..+.|.|+... . ..|+|+.+.|+.||..+..
T Consensus 29 ~~qLY~r-~g~~LqI~~d-------G~V~Gt~~--~~s~~silei~sv~------~-g~V~I~gv~s~~YLcMn~~ 87 (174)
T 1ihk_A 29 RRQLYCR-TGFHLEIFPN-------GTIQGTRK--DHSRFGILEFISIA------V-GLVSIRGVDSGLYLGMNEK 87 (174)
T ss_dssp EEEEEET-TSCEEEECTT-------SCEEEESS--TTCGGGCEEEEEEE------T-TEEEEEETTTCCEEEECTT
T ss_pred EEEEEec-CCcEEEECCC-------CcEEeecC--CCCCcceEEEEecc------C-ceEEEEEcccCcEEEEcCC
Confidence 4566665 4778877532 45888763 23567788887652 2 4799999999999998754
No 34
>2f2f_C CDT C, cytolethal distending toxin C; actinobacillus actinomycetemcomitans, oligomerization, stability and toxic activity; 2.40A {Aggregatibacter actinomycetemcomitans} SCOP: b.42.2.1
Probab=70.93 E-value=22 Score=27.99 Aligned_cols=128 Identities=11% Similarity=0.091 Sum_probs=77.6
Q ss_pred eCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeee-eCCEEEEEeCCCCCeEE
Q 027975 38 YGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIK-SGTIIRLQHMRTRKWLH 116 (216)
Q Consensus 38 ~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~-~gd~IrL~H~~T~~~L~ 116 (216)
....+.||+..||--|+- ..|..+ +-....|.++.+.-.. .+.+. .+-.|+++++.++..|.
T Consensus 36 ~tp~fsiRsl~TG~~l~~--~~~~~~------------~~~~~nW~l~ei~~~~---~d~~~~~~G~VqFvn~~t~tCL~ 98 (186)
T 2f2f_C 36 PPPRISLRSLLTAQPIKN--DHYDSH------------NYLSTHWELIDYKGKE---YEKLRDGGTLVQFKVVGAAKCFA 98 (186)
T ss_dssp CCCEEEEEETTTCCBCCC--SSSCTT------------SGGGGCEEEEECCCST---TTTTCTTCEEEEEECTTSSEEEC
T ss_pred CCCcEEEEecccCccccc--cccccc------------ccccCCcEEEEecccc---cccccCCCCeEEEEeCCCCeeee
Confidence 488999999999998763 122211 1123458888664332 23342 34789999999999997
Q ss_pred ecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeE-EEE-e
Q 027975 117 SHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEV-CGV-R 194 (216)
Q Consensus 117 sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV-~c~-~ 194 (216)
.-+. .--+|-. .+ ...|.|-.- .+..|+|+.+.++..|.+ .+ | +.+-+ -|. +
T Consensus 99 ~~~~-------~~~~C~~----~~-~t~FsliPT-------tnGAVQIrS~~~~~Ci~~-~n--~----~~fgl~~C~~~ 152 (186)
T 2f2f_C 99 FPGE-------GTTDCKD----ID-HTVFNLIPT-------NTGAFLIKDALLGFCMTS-HD--F----DDLRLEPCGIS 152 (186)
T ss_dssp TTCS-------SEEETTC----HH-HHCEEEEEB-------SSSCEEEEETTTCCEEEC-CS--T----TCCEEECCCSC
T ss_pred ecCC-------ccccCCC----CC-cceEEEEec-------CCccEEEEecCCCceEee-cC--c----CceEEeecCCC
Confidence 5221 1112311 22 567887654 446799999999999998 43 2 22222 354 1
Q ss_pred CC----CCCCcEEEeeee
Q 027975 195 EK----RADNVWLAAEGV 208 (216)
Q Consensus 195 ~~----~~~~~W~i~~~~ 208 (216)
.+ +-+.+|.|..-.
T Consensus 153 d~~~~i~L~~Lw~ItPP~ 170 (186)
T 2f2f_C 153 VSGRTFSLAYQWGILPPF 170 (186)
T ss_dssp CTTCEECGGGCEEEECCS
T ss_pred CcccccCHHHceeeccCc
Confidence 21 346799986544
No 35
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=70.85 E-value=39 Score=28.34 Aligned_cols=94 Identities=11% Similarity=0.199 Sum_probs=58.7
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
|...+|++..+|..|-.....-..| -.|-.+...+..|-.|+++... ...+|+++.++++|-..
T Consensus 57 G~~Y~I~N~~SGKcLDV~g~sTadG---a~V~qW~~nGg~NQqW~l~~~~-------------G~y~I~n~~SGkcLDV~ 120 (286)
T 3phz_A 57 ADTYTVRNAFAGSYMDLAGHAATDG---TAIIGYRPTGGDNQKWIISQIN-------------DVWKIKSKETGTFVTLL 120 (286)
T ss_dssp TTEEEEEETTTCCEEEEGGGCCSTT---EEEEEECCCCCGGGCEEEEESS-------------SCEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCcEEEeCCCcCCCC---CeEEEeCCCCChhcEEEEEcCC-------------CeEEEEECCCCcEEEeC
Confidence 5578999999999998754433333 3343343324567789998641 24799999999999744
Q ss_pred CCCCCCCCceEEEEecCCCCCCCCCcEEEEEec
Q 027975 119 LHASPISGNLEISCFGGEEESDTGDYWRVMIEG 151 (216)
Q Consensus 119 ~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~ 151 (216)
.-...-.|- |.-.. ...+.++-.|+++...
T Consensus 121 ~gsttanGa--V~qWt-~~tgg~NQqW~~~~vs 150 (286)
T 3phz_A 121 NGDGGGTGT--VVGWQ-NITNNTSQNWTFQKLS 150 (286)
T ss_dssp TC---CCCE--EEEES-CCCSSCTTCEEEEECE
T ss_pred CCCcCCCce--EEEcc-CCCCCccCcEEEEEcc
Confidence 322101222 54444 1224678899998764
No 36
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=67.16 E-value=18 Score=27.01 Aligned_cols=61 Identities=15% Similarity=0.312 Sum_probs=41.7
Q ss_pred CCEEEEEeCC--CCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEE
Q 027975 39 GTVLKLMHEK--TKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLH 116 (216)
Q Consensus 39 Gd~I~L~h~~--T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~ 116 (216)
|..+|+++.. ||.+|..+ |.| .|.+.....+....|.|+.+. .| .|+|+.+.|+.||.
T Consensus 7 G~~~R~~~LY~r~g~~L~I~----~dG----~V~Gt~~~~~~~s~l~~~sv~-----------~g-~V~I~gv~s~~YLc 66 (140)
T 1qql_A 7 GGDIRVRRLFCRTQWYLRID----KRG----KVKGTQEMRNSYNIMEIRTVA-----------VG-IVAIKGVESEYYLA 66 (140)
T ss_dssp --CEEEECCEETTTEEEEEC----TTC----CEEEESCTTCSTTCEEEEEEE-----------TT-EEEEEETTTCCCCE
T ss_pred CceeEEEEEEecCCeEEEEC----CCC----eEEeecCCCCCceEEEEEeec-----------CC-EEEEEEcccCcEEE
Confidence 6567777764 46677776 433 366665544667788888653 34 89999999999998
Q ss_pred ecC
Q 027975 117 SHL 119 (216)
Q Consensus 117 sh~ 119 (216)
-+.
T Consensus 67 mn~ 69 (140)
T 1qql_A 67 MNK 69 (140)
T ss_dssp ECT
T ss_pred EcC
Confidence 764
No 37
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=65.68 E-value=50 Score=26.40 Aligned_cols=59 Identities=15% Similarity=0.052 Sum_probs=42.8
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..+|+-. |+.+|..+. ...|.+..+ ..+..+.|.|+.... ..|+|+.+.|+.||..+..
T Consensus 66 ~rqLYcr-tg~hLqI~~-------dG~V~GT~~--~~s~yslLei~sv~~-------G~V~IkGv~S~~YLcMn~~ 124 (211)
T 3f1r_A 66 RRQLYCR-TGFHLQILP-------DGSVQGTRQ--DHSLFGILEFISVAV-------GLVSIRGVDSGLYLGMNDK 124 (211)
T ss_dssp EEEEEET-TTEEEEECT-------TSCEEEESC--TTCSSSEEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred EEEEEEc-CCeEEEECC-------CCcEEeccC--CCCCcceeeEEeccC-------CEEEEEEeecceEEEECCC
Confidence 4667665 588887753 346888764 245788898876532 4799999999999998754
No 38
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=64.89 E-value=22 Score=26.74 Aligned_cols=63 Identities=16% Similarity=0.294 Sum_probs=43.0
Q ss_pred eeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEE
Q 027975 37 TYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLH 116 (216)
Q Consensus 37 ~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~ 116 (216)
..+..++|....+|.+|..+ |.| .|.+.....+....|.|+.+. .| +|+|+.+.|+.||.
T Consensus 16 ~~~r~~rLY~r~~g~~LqI~----~dG----~V~Gt~~~~~~~s~l~i~sv~-----------~G-~V~I~gv~s~~YLc 75 (146)
T 1bfg_A 16 HFKDPKRLYCKNGGFFLRIH----PDG----RVDGVREKSDPHIKLQLQAEE-----------RG-VVSIKGVSANRYLA 75 (146)
T ss_dssp ---CCEEEEETTTTEEEEEC----TTS----CEEEECCTTCGGGCEEEEECS-----------TT-EEEEEETTTTEEEE
T ss_pred CcCccEEEEEcCCCEEEEEC----CCC----eEEeecCCCCCceEEEEEecc-----------CC-EEEEEEcccCcEEE
Confidence 45677888876557888886 333 366655534566778887653 24 89999999999998
Q ss_pred ecC
Q 027975 117 SHL 119 (216)
Q Consensus 117 sh~ 119 (216)
-+.
T Consensus 76 Mn~ 78 (146)
T 1bfg_A 76 MKE 78 (146)
T ss_dssp ECT
T ss_pred EcC
Confidence 764
No 39
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=64.57 E-value=28 Score=26.49 Aligned_cols=62 Identities=18% Similarity=0.410 Sum_probs=45.5
Q ss_pred eCCEEEEEeCC--CCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeE
Q 027975 38 YGTVLKLMHEK--TKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWL 115 (216)
Q Consensus 38 ~Gd~I~L~h~~--T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L 115 (216)
+|..++|.-.. ||.+|..+ |.| .|.|..+ .+....|.|+.+.. .+|+|+.+.|+.||
T Consensus 12 ~~~~~~LY~~~~rtg~~LqI~----~dG----~V~Gt~d-~~~~s~Lei~sv~~------------g~V~Ikgv~s~~YL 70 (155)
T 2p39_A 12 WGGLIHLYTATARNSYHLQIH----KNG----HVDGAPH-QTIYSALMIRSEDA------------GFVVITGVMSRRYL 70 (155)
T ss_dssp STTCEEEECTTSSSCCEEEEC----TTS----CEEEESS-CCTTTCEEEEECGG------------GEEEEEETTTTEEE
T ss_pred CCCEEEEEEccCCCceEEEEC----CCC----cEeCccC-CCCcEEEEEEeecC------------CEEEEEEeccCcEE
Confidence 67788888764 88999887 333 4555555 46677888876531 48999999999999
Q ss_pred EecCC
Q 027975 116 HSHLH 120 (216)
Q Consensus 116 ~sh~~ 120 (216)
.-...
T Consensus 71 cMn~~ 75 (155)
T 2p39_A 71 CMDFR 75 (155)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 87643
No 40
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=59.14 E-value=30 Score=25.89 Aligned_cols=60 Identities=17% Similarity=0.350 Sum_probs=43.0
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
|...+|.-. ||.+|..+ |.| .|.|.....+....|.|..+.. -+|+|+.+.|+.||.-.
T Consensus 10 g~~~~Ly~r-~g~~LqI~----~dG----~V~Gt~~~~~~~sile~~sv~~------------g~V~I~gv~s~~YLcMn 68 (144)
T 1q1u_A 10 GIVTRLFSQ-QGYFLQMH----PDG----TIDGTKDENSDYTLFNLIPVGL------------RVVAIQGVKASLYVAMN 68 (144)
T ss_dssp CEEEEEEET-TTEEEEEC----TTS----CEEEESCTTSGGGCEEEEEEET------------TEEEEEETTTCCEEEEC
T ss_pred CceEEEEEc-CCeEEEEC----CCC----cEeeecCCCCCceeEEEEeccC------------CEEEEEEcccCcEEEEc
Confidence 777788776 58888886 333 3666655345567888886532 47999999999999876
Q ss_pred C
Q 027975 119 L 119 (216)
Q Consensus 119 ~ 119 (216)
.
T Consensus 69 ~ 69 (144)
T 1q1u_A 69 G 69 (144)
T ss_dssp T
T ss_pred C
Confidence 4
No 41
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=57.96 E-value=73 Score=27.86 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=53.5
Q ss_pred eeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCC-CCeE
Q 027975 37 TYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRT-RKWL 115 (216)
Q Consensus 37 ~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T-~~~L 115 (216)
+.+..++|+|..||.||+.-. .++-.++.-++. .-..-.|.++.. .| .+||++..+ +.||
T Consensus 331 ~~~g~~~ikn~~tg~y~~~~~-----~~~~~~~~~~~~-~w~~~~w~~~~~------------~G-~~~i~~~~~~~~~l 391 (420)
T 1ups_A 331 YRDGYTLLKNNETGEYLNIEN-----QTGYIEHGKVPK-TWWSAQWSEVPV------------DG-YTRFVNRWKPNMSI 391 (420)
T ss_dssp EETTEEEEEETTTCCEEECTT-----CCSBCEEECCCT-TCGGGCEEEEEE------------TT-EEEEEESSSTTCEE
T ss_pred ecCCcEEEeeccccceEcccc-----CCCccccccCCC-CcccceEEEecC------------CC-eEEEEEeccCCceE
Confidence 345788999999999999743 123344443222 113445776532 22 789999877 7888
Q ss_pred EecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEe
Q 027975 116 HSHLHASPISGNLEISCFGGEEESDTGDYWRVMIE 150 (216)
Q Consensus 116 ~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~ 150 (216)
+.-+ ..|.-|-+-. ..++....|.|+..
T Consensus 392 ~~e~----~~g~~~~g~v---~~~~~~~~w~~~~~ 419 (420)
T 1ups_A 392 HTES----YEGVLQYGNV---PNTYWTSQWQLIPV 419 (420)
T ss_dssp ECTT----CCSBCEEECC---CTTCGGGCEEEEEE
T ss_pred EEec----cCCceeeccc---CCccCCceEEEEec
Confidence 7543 2233333332 24677788998864
No 42
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=57.62 E-value=30 Score=27.32 Aligned_cols=49 Identities=12% Similarity=0.213 Sum_probs=36.2
Q ss_pred CeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 113 KWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 113 ~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
++|..+. ...|.|..+ .+..+.|.|+.... ..|+|+.+.|+.||..+..
T Consensus 36 ~~LqI~~-------dG~V~Gt~d---~s~~siLei~sv~~-------G~V~IkGv~S~~YLcMn~~ 84 (194)
T 2p23_A 36 CFLRIRA-------DGVVDCARG---QSAHSLLEIKAVAL-------RTVAIKGVHSVRYLCMGAD 84 (194)
T ss_dssp EEEEECT-------TSBEEEESS---CCTTTCEEEEEEET-------TEEEEEETTTCCEEEECGG
T ss_pred eEEEECC-------CCcEeCccC---CCcccEEEEEeccC-------CEEEEEEcccCcEEEECCC
Confidence 4887653 356888753 36778898876532 4799999999999998754
No 43
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=57.61 E-value=58 Score=24.42 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=50.6
Q ss_pred CEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 40 TVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 40 d~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
+.|+||... |+||-.-. .+ .|++..........|.++.. +..+.|++ .+++||.+..
T Consensus 72 ~~v~LRs~~-GkYLs~~~------~G--~v~a~a~~~g~~E~F~l~~~-------------~G~~aLra-~nG~yl~~~~ 128 (155)
T 2yug_A 72 SRIALKSGY-GKYLGINS------DG--LVVGRSDAIGPREQWEPVFQ-------------DGKMALLA-SNSCFIRCNE 128 (155)
T ss_dssp SCEEEEETT-SCBEEECS------SS--BEEECCSSCCTTTBEEEECS-------------TTCCEEEE-TTSCBEEECS
T ss_pred CEEEEEeCC-CCEEEecC------CC--cEEeccCCCCCCCEEEEEEE-------------CCEEEEEe-CCCCEEEEcC
Confidence 588898754 88988742 12 45554443456777887743 12478999 6999998753
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCcEEEEEe
Q 027975 120 HASPISGNLEISCFGGEEESDTGDYWRVMIE 150 (216)
Q Consensus 120 ~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~ 150 (216)
. ..+.|.... -.....|+|+..
T Consensus 129 ~-------g~l~a~a~~--~~~~E~f~v~l~ 150 (155)
T 2yug_A 129 A-------GDIEAKNKT--AGEEEMIKIRSC 150 (155)
T ss_dssp S-------SCEEECCSC--CCTTTCCEEEEC
T ss_pred C-------CcEEEecCC--CCCCcEEEEEEe
Confidence 2 247775421 234678988864
No 44
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=57.50 E-value=35 Score=26.95 Aligned_cols=63 Identities=19% Similarity=0.197 Sum_probs=45.6
Q ss_pred eeCCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 99 KSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 99 ~~gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
--|.+-+|+-. ++.+|..+. ...|.|..+ ..+..+.|.|..... ..|+|+.+.|+.||..+..
T Consensus 14 l~g~~rqLYcr-~G~hLqI~~-------dG~V~GT~~--~~s~~slLei~sv~~-------GvV~IkGv~S~~YLcMn~~ 76 (193)
T 3hbw_A 14 LKGIVTKLYSR-QGYHLQLQA-------DGTIDGTKD--EDSTYTLFNLIPVGL-------RVVAIQGVQTKLYLAMNSE 76 (193)
T ss_dssp EEEEEEEEEET-TSCEEEECT-------TSCEEEESC--TTCGGGCEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred ccceeeEEEEc-CCeEEEEcC-------CCcEEcccC--CCCCceEEEEEeccC-------CEEEEEEeeceeEEEEcCC
Confidence 34666788887 599998764 356888753 235678888775533 4689999999999998754
No 45
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=57.38 E-value=52 Score=24.61 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=40.8
Q ss_pred EEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 41 VLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 41 ~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
.++|.-..+|.+|..+ |.| .|.|.....+....|.|+.+. .| +|+|+.+.|+.||.-+.
T Consensus 17 ~~qLY~r~~g~~LqI~----~dG----~V~Gt~~~~~~~s~l~i~sv~-----------~G-~V~I~gv~s~~YLcMn~ 75 (146)
T 1rg8_A 17 PKLLYCSNGGHFLRIL----PDG----TVDGTRDRSDQHIQLQLSAES-----------VG-EVYIKSTETGQYLAMDT 75 (146)
T ss_dssp CEEEEETTTTEEEEEC----TTS----CEEEECCTTCTTCCEEEEEEE-----------TT-EEEEEETTTCCEEEECT
T ss_pred EEEEEEcCCCEEEEEC----CCC----cEeeeccCCCCceEEEEEeec-----------CC-eEEEEEcccCcEEEECC
Confidence 4555555457788775 333 366666544667788888652 24 89999999999998764
No 46
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=56.46 E-value=33 Score=26.25 Aligned_cols=49 Identities=12% Similarity=0.216 Sum_probs=35.6
Q ss_pred CeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 113 KWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 113 ~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
++|..+. ...|.|..+ .+..+.|.|+... . ..|+|+.+.|+.||..+..
T Consensus 24 ~~LqI~~-------dG~V~Gt~d---~~~~siLei~sv~------~-g~V~I~gv~s~~YLcMn~~ 72 (162)
T 1pwa_A 24 CFLRIRA-------DGVVDCARG---QSAHSLLEIKAVA------L-RTVAIKGVHSVRYLCMGAD 72 (162)
T ss_dssp EEEEECT-------TSBEEEESS---CCGGGCEEEEEEE------T-TEEEEEETTTCCEEEECGG
T ss_pred eEEEECC-------CCcEeCCcC---CCCccEEEEEeec------C-CEEEEEEcccCcEEEEcCC
Confidence 3787653 356888742 3567788887652 2 5899999999999998754
No 47
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=55.27 E-value=65 Score=25.64 Aligned_cols=90 Identities=10% Similarity=0.232 Sum_probs=52.7
Q ss_pred eCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEe
Q 027975 38 YGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHS 117 (216)
Q Consensus 38 ~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~s 117 (216)
....|+|+|..||.-|++. +.| . ++..-..++..-.|.|.+... |. |+|+++.++..|.+
T Consensus 106 p~G~VqFvN~~TgtCL~ay----~nG---v-v~~~C~~s~~~Q~wsiiPttn-----------GA-VQIKnvatg~CL~t 165 (206)
T 1sr4_A 106 HREYFRFVNQSLGTCVEAY----GNG---L-IHDICSLDKLAQEFELLPTDS-----------GA-VVIKSVSQGRCVTY 165 (206)
T ss_dssp STTCEEEEETTTCCEEEEE----TTE---E-EEECCCTTCGGGCEEEEEBTT-----------SC-EEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCceeeec----cCC---e-EEecCCCCCcccEEEEecCCC-----------cc-EEEEECCCCccCCc
Confidence 4788999999999999984 322 1 221111133356799997642 22 79999999999987
Q ss_pred cCCCCCCCCce-EEEEecCCCCCCCCCcEEEE
Q 027975 118 HLHASPISGNL-EISCFGGEEESDTGDYWRVM 148 (216)
Q Consensus 118 h~~~~p~s~~~-EVs~~~~~~~~d~~~~W~IE 148 (216)
.....-.-... -..|. +....+.+..|.|-
T Consensus 166 ~~~s~~~~~~i~l~~C~-d~~~~~l~QlW~it 196 (206)
T 1sr4_A 166 NPVSTTFYSTVTLSVCD-GATEPSRDQTWYLA 196 (206)
T ss_dssp CSSCSSSCBCEEEECCC-CCEETTEECCEEEE
T ss_pred cCCCCceeeeEEEeecC-CCCCCCHHHCEEec
Confidence 43321110111 22333 12234566778764
No 48
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=53.76 E-value=48 Score=25.36 Aligned_cols=62 Identities=10% Similarity=0.140 Sum_probs=39.8
Q ss_pred CCEEEEEeC---CCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeE
Q 027975 39 GTVLKLMHE---KTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWL 115 (216)
Q Consensus 39 Gd~I~L~h~---~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L 115 (216)
|..||+++. .+|.+|..+ |.| .|.+.....+....|.|+... .|..|+|+.+.|+.||
T Consensus 26 ~~~~R~~qLY~rt~g~~LqI~----~dG----~V~Gt~~~~~~~s~L~~~s~~-----------~g~~V~I~gv~s~~YL 86 (164)
T 2fdb_M 26 RRLIRTYQLYSRTSGKHVQVL----ANK----RINAMAEDGDPFAKLIVETDT-----------FGSRVRVRGAETGLYI 86 (164)
T ss_dssp CCCEEEEEEEETTTSSEEEEC----TTS----CEEEEECTTCGGGCEEEEEEE-----------TTTEEEEEETTTCCEE
T ss_pred CCcceEEEEEEccCCeEEEEC----CCC----cEEeeccCCCcceEEEEEEec-----------cceEEEEEEeccCcEE
Confidence 445566554 347788886 333 355554423555677777432 3458999999999999
Q ss_pred EecC
Q 027975 116 HSHL 119 (216)
Q Consensus 116 ~sh~ 119 (216)
.-..
T Consensus 87 cMn~ 90 (164)
T 2fdb_M 87 CMNK 90 (164)
T ss_dssp EECT
T ss_pred EEcC
Confidence 8764
No 49
>2y9f_A LSL-150, hemolytic lectin LSLA; sugar binding protein; 1.47A {Laetiporus sulphureus} PDB: 2y9g_A*
Probab=53.58 E-value=61 Score=24.11 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=58.5
Q ss_pred CCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCC
Q 027975 101 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKY 180 (216)
Q Consensus 101 gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~l 180 (216)
|=.|||.|-.+.+-|.+.....|.-+..+|+ ....+.|-.-+.+.| +..-.+-++-..||.-|.+...+-
T Consensus 10 glyfRll~f~S~~Vi~a~~~~sp~v~~~~v~-------~~y~dQ~F~lI~g~g---e~~G~yaIkSk~Tg~vlfsr~~~~ 79 (150)
T 2y9f_A 10 GLYFRLLGFASRQVIFARNSPSPDVGLSPVN-------DQATDQYFSLIYGTG---EHAGLYAIKSKATGKVLFSRRPAE 79 (150)
T ss_dssp TCCBEEEETTTCEEEEECSSSSCCEEEEEGG-------GCCGGGCEEEEECCG---GGTTCEEEEETTTCCEEEECSSSS
T ss_pred ceeeeeeccceeeEEEecCCCCccccccccc-------cccCcEEEEEeccCC---CcCceEEEEecCcCcEEEEecCCC
Confidence 4569999999999999877777765544442 234455655555443 234567778899999998865433
Q ss_pred CCCCCCCeeEEEEeC--CCCCCcEEEeeee
Q 027975 181 QRIAGGQQEVCGVRE--KRADNVWLAAEGV 208 (216)
Q Consensus 181 p~~~~~q~EV~c~~~--~~~~~~W~i~~~~ 208 (216)
| -|-|.+. +-.++++.+|++-
T Consensus 80 p-------~vG~~d~Dgky~dnwF~~E~gk 102 (150)
T 2y9f_A 80 P-------YVGQIDGDGRYPDNWFKIEPGK 102 (150)
T ss_dssp S-------SEEEESSSSCSGGGCBEEEECC
T ss_pred C-------ccceeCCCCccccccEEEccCC
Confidence 3 2344433 2346677777764
No 50
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=48.18 E-value=77 Score=23.06 Aligned_cols=59 Identities=22% Similarity=0.367 Sum_probs=43.7
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 177 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~ 177 (216)
.|-|+-..++.+|..+. ...|.+..+ ..++.+.|.|....- ..++|+-+.||.||....
T Consensus 7 ~~~~~~~~~g~~L~I~~-------dG~V~Gt~~--~~~~~s~l~~~~v~~-------G~V~I~g~~sg~yL~m~~ 65 (132)
T 3q7x_A 7 EVLLRSTETGQFLRINP-------DGTVDGTRD--RSDPGIQFQISPEGN-------GEVLLRSTETGQFLRINP 65 (132)
T ss_dssp CEEEEETTTCCEEEECT-------TSBEEEECC--TTCGGGCEEEEEEET-------TEEEEEETTTCCEEEECT
T ss_pred hheeeeccCcEEEEECC-------CCcEEeecC--CCCCCcEEEEEeccc-------CEEEEEEEcccEEEEECC
Confidence 46778888999997653 356888763 246778898876532 268999999999998864
No 51
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=47.96 E-value=61 Score=29.04 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=55.8
Q ss_pred CEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 40 TVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 40 d~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
...+|++..+|..|-.....-..| ..|..+...+..+-.|+++... +..++|++..+++.|-..+
T Consensus 408 g~y~i~n~~sg~cLdv~~~~~~~G---~~v~~~~c~g~~nQ~W~~~~~g------------~g~y~i~~~~sg~cLdv~~ 472 (526)
T 3vsf_A 408 GYKKIVNVKSGRALDVKDESKEDG---GVLIQYTSNGGYNQHWKFTDIG------------DGYYKISSRHCGKLIDVRK 472 (526)
T ss_dssp TEEEEEESSSCCEEEEGGGCCSTT---EEEEEECCCCCGGGCEEEEEEE------------TTEEEEEESSSCCEEEEGG
T ss_pred CEEEEEECCCCCEEEeCCCCCCCC---CEEEEecCCCCcccEEEEEECC------------CCeEEEEECCCCCEEEeCC
Confidence 568899998998888654333333 2343333323467779988653 2468999999999997653
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCcEEEEEecC
Q 027975 120 HASPISGNLEISCFGGEEESDTGDYWRVMIEGS 152 (216)
Q Consensus 120 ~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~ 152 (216)
... -. ...|.-.... +..+..|+++....
T Consensus 473 ~s~-~~-G~~v~~~~c~--g~~nQ~W~~~~v~~ 501 (526)
T 3vsf_A 473 WST-ED-GGIIQQWSDA--GGTNQHWKLVLVSS 501 (526)
T ss_dssp GCC-ST-TEEEEEECCC--CCGGGCEEEEEC--
T ss_pred CCC-CC-CCEEEEEcCC--CCccCeEEEEecCC
Confidence 211 11 2233333321 34677899987654
No 52
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=47.94 E-value=84 Score=23.42 Aligned_cols=99 Identities=23% Similarity=0.309 Sum_probs=55.9
Q ss_pred EEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecCCC
Q 027975 42 LKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHA 121 (216)
Q Consensus 42 I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~~~ 121 (216)
.+|.-..+|.+|-.. |.| .|.+.....+....+.|.++. .| +|+|+-+.|+.||.....
T Consensus 43 r~LYcr~~g~hLqI~----~dG----~V~Gt~~~~s~~s~Lei~sv~-----------~G-vV~I~Gv~tg~yL~Mn~d- 101 (142)
T 3p6i_A 43 VLLKSTETGQYLRIN----PDG----TVDGTRDRSDTHIQFQISPEG-----------NG-EVLLKSTETGQYLRINPD- 101 (142)
T ss_dssp EEEEETTTCCEEEEC----TTS----BEEEECCTTCTTCCEEEEEEE-----------TT-EEEEEETTTCCEEEECTT-
T ss_pred EEEEEcCCCEEEEEC----CCC----cCcCcCCCCCCceEEEEEecc-----------CC-EEEEEEecCceEEeECCC-
Confidence 344444335555543 322 344444323555556665442 34 899999999999987532
Q ss_pred CCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccC
Q 027975 122 SPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSH 176 (216)
Q Consensus 122 ~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~ 176 (216)
..|.+... ..+.-....+...+ .-.+.|+-+++|.||+.+
T Consensus 102 ------G~l~Gs~~--~s~ec~flEi~~v~-------~G~V~Ikgv~Sg~YLaMn 141 (142)
T 3p6i_A 102 ------GTVDGTRD--RSDTHIQFQISPEG-------NGEVLLKSTETGQYLRIN 141 (142)
T ss_dssp ------SBEEEECC--TTCTTCCEEEEECS-------SSCEEEEETTTTEEEEEC
T ss_pred ------CCCccccC--CCCCeEEEEEEEEe-------CCEEEEEEEecceEEEEC
Confidence 34555532 11222222222221 246899999999999875
No 53
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=42.77 E-value=1e+02 Score=24.57 Aligned_cols=88 Identities=11% Similarity=0.138 Sum_probs=54.3
Q ss_pred CCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCC
Q 027975 101 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKY 180 (216)
Q Consensus 101 gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~l 180 (216)
...|+|+|..|+..|.+... |-.--+|.. +.....|+|....+ ..++|+++.+|..|.+....-
T Consensus 107 ~G~VqFvN~~TgtCL~ay~n-----Gvv~~~C~~----s~~~Q~wsiiPttn-------GAVQIKnvatg~CL~t~~~s~ 170 (206)
T 1sr4_A 107 REYFRFVNQSLGTCVEAYGN-----GLIHDICSL----DKLAQEFELLPTDS-------GAVVIKSVSQGRCVTYNPVST 170 (206)
T ss_dssp TTCEEEEETTTCCEEEEETT-----EEEEECCCT----TCGGGCEEEEEBTT-------SCEEEEETTTCCEEEECSSCS
T ss_pred CCEEEEEECCCCceeeeccC-----CeEEecCCC----CCcccEEEEecCCC-------ccEEEEECCCCccCCccCCCC
Confidence 56799999999999987432 211222321 23457899876533 457999999999999743211
Q ss_pred CCCCCCCeeE-EEEeC--CCCCCcEEEee
Q 027975 181 QRIAGGQQEV-CGVRE--KRADNVWLAAE 206 (216)
Q Consensus 181 p~~~~~q~EV-~c~~~--~~~~~~W~i~~ 206 (216)
. .+.+.-. .|.+. .+-+.+|+|..
T Consensus 171 ~--~~~~i~l~~C~d~~~~~l~QlW~itp 197 (206)
T 1sr4_A 171 T--FYSTVTLSVCDGATEPSRDQTWYLAP 197 (206)
T ss_dssp S--SCBCEEEECCCCCEETTEECCEEEEC
T ss_pred c--eeeeEEEeecCCCCCCCHHHCEEecc
Confidence 0 1233333 46532 34577998854
No 54
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=41.24 E-value=1e+02 Score=25.71 Aligned_cols=97 Identities=12% Similarity=0.212 Sum_probs=59.0
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeec----CCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCe
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFP----DVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKW 114 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~----~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~ 114 (216)
+...+|++..+|.+|-.....-..| -.|..+. . ...+-.|+|++.... ..++|++..+++.
T Consensus 57 ~G~Y~I~n~~SGkcLDV~~~stanG---t~V~qw~~~~~~-~g~nQqW~l~~~~g~-----------G~y~I~n~~SGk~ 121 (293)
T 3ef2_A 57 ADTFTLCNLFSGTYMDLYNGSSEAG---TAVNGWQGTAFT-TNPHQLWTIKKSSDG-----------TSYKIQNYGSKTF 121 (293)
T ss_dssp TTEEEEEETTTCCEEEEGGGCCSTT---EEEEEECCCTTC-CCGGGCEEEEECTTS-----------SSEEEEETTTCCE
T ss_pred CceEEEEECCCCCEEecCCCCCCCC---CEEEEeccCCCC-CCCCcEEEEEEeCCC-----------CEEEEEECCCCcE
Confidence 4688999999999998765443333 3344444 2 233778999976321 2478999999999
Q ss_pred EEecCCCCCCCCceEEEEec-CCCCCCCCCcEEEEEecC
Q 027975 115 LHSHLHASPISGNLEISCFG-GEEESDTGDYWRVMIEGS 152 (216)
Q Consensus 115 L~sh~~~~p~s~~~EVs~~~-~~~~~d~~~~W~IE~~~~ 152 (216)
|-..+.. .-.| -.|.-+. .-..+.++-.|+++....
T Consensus 122 LDV~g~s-tanG-t~V~qw~~~~~~g~~nQqW~l~~~s~ 158 (293)
T 3ef2_A 122 VDLVNGD-SSDG-AKIAGWTGTWDEGNPHQKWYFNRMSV 158 (293)
T ss_dssp EEEGGGC-CSTT-EEEEEECCCSSCCCGGGCEEEEECEE
T ss_pred EEeCCCC-CCCC-CEEEEEeccCCCCCcccEEEEEecCC
Confidence 9765421 1122 2233322 000245778899988753
No 55
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=40.73 E-value=2.6e+02 Score=26.98 Aligned_cols=118 Identities=16% Similarity=0.245 Sum_probs=71.3
Q ss_pred CCCeeeeCCEEEEEeCCCCC-CeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCC
Q 027975 32 ETVEITYGTVLKLMHEKTKF-RLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMR 110 (216)
Q Consensus 32 ~~~~V~~Gd~I~L~h~~T~~-~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~ 110 (216)
....|..| ..+|.+...+. .|-. .-.+ ....|..+......+-.|++...... ...||+++.
T Consensus 264 ~~~~i~~G-~Y~I~~~~~~~~vldv-~s~~----~g~~VqLw~~~~~~nQ~W~f~yd~~~-----------g~Y~IrN~~ 326 (841)
T 2vse_A 264 SLNVIQNS-EYQIKNKKDRNIVVTL-DSDY----GGSPVESYKNFGFENQKWNIKYDSKK-----------NAYKIYNRE 326 (841)
T ss_dssp CCCSCCSE-EEEEEESSCTTEEEEE-CSSS----TTEEEEEEECCCCGGGCEEEEEETTT-----------TEEEEEESS
T ss_pred cCCcCCCC-EEEEEEccCCCEEEec-ccCC----CCCeEEEEcCCCCccceEEEEECCCC-----------CEEEEEEcC
Confidence 34446555 78899886554 6644 1111 12356666643566778999865421 357999999
Q ss_pred CCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEc-cCCceeccC
Q 027975 111 TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHV-DTGGYLHSH 176 (216)
Q Consensus 111 T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~-~t~~yL~s~ 176 (216)
++++|.+-+... -.+..-|..+.. .+.....|+|+...+| .++|++. .++.+|-..
T Consensus 327 sgk~L~~~~~~s-~~G~~~V~~~~~--~gs~~Q~W~i~~~gdG-------~y~I~N~~~sglvLDv~ 383 (841)
T 2vse_A 327 TPTLLLSWNSNS-SNGEQVIRGYTE--SGSNNQYWTIEKNVNG-------FYKFRNLSDPSKILDLK 383 (841)
T ss_dssp STTCEEECCTTC-GGGCCBCEEECC--CSCGGGCEEEEECTTS-------CEEEEESSCTTCEEEEG
T ss_pred CCCEEEEcCCCC-CCCceEEEEecC--CCCcccEEEEEECCCc-------eEEEEecCCCceEEEec
Confidence 999987754321 122223444432 2345678999876443 4888887 678888654
No 56
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=40.68 E-value=63 Score=24.04 Aligned_cols=90 Identities=11% Similarity=0.151 Sum_probs=52.9
Q ss_pred eeCCEEEEEeCC-CCCeEEecCCCCCCCCceEEEEecCCCCCCCCCc----EEEEEecCCceeccCCcEEEEEccCCcee
Q 027975 99 KSGTIIRLQHMR-TRKWLHSHLHASPISGNLEISCFGGEEESDTGDY----WRVMIEGSGKTWRQDQRIRLQHVDTGGYL 173 (216)
Q Consensus 99 ~~gd~IrL~H~~-T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~----W~IE~~~~~~~~~~~s~frL~H~~t~~yL 173 (216)
..|. .+|+++. ++++|-...... ...-.|..+... +..+-. |+|+...+.. ...++|+++ |+||
T Consensus 3 ~~G~-Y~I~n~~~sgk~lDv~~~st--a~Gt~V~~w~~~--g~~nQ~~~~~W~~~~~~~~~----~g~y~i~n~--G~~L 71 (148)
T 3nbc_A 3 TPGT-YNITNVAYTNRLIDLTGSNP--AENTLIIGHHLN--KTPSGYGNQQWTLVQLPHTT----IYTMQAVNP--QSYV 71 (148)
T ss_dssp CSEE-EEEEESSCTTCEEEEGGGCC--STTEEEEEECCC--STTTCCGGGCEEEEECTTSS----EEEEEESSS--CCEE
T ss_pred cCCE-EEEEEecCCCCeEECCCCcC--CCCcEEEEeCCC--CChhheeecEEEEEECCCcc----cceEEEEEC--CcEE
Confidence 3443 8999999 999997654311 123556666642 456778 9998764411 034677777 8999
Q ss_pred ccCCCCCCCCCCCCeeEEEEeCCCCCCcEEEee
Q 027975 174 HSHPKKYQRIAGGQQEVCGVREKRADNVWLAAE 206 (216)
Q Consensus 174 ~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~i~~ 206 (216)
-..... . ..+. .|.... ....|+|+.
T Consensus 72 dv~~~~-t--a~Gt-~v~~~~---~~q~W~i~~ 97 (148)
T 3nbc_A 72 RVRDDN-L--VDGA-ALVGSQ---QPTPVSIES 97 (148)
T ss_dssp EEGGGC-C--STTC-BEEEES---SCCCEEEEE
T ss_pred EccCCC-C--CCCc-EEecCC---CCcEEEEEE
Confidence 644321 1 1222 233332 245788875
No 57
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=40.13 E-value=1.1e+02 Score=22.61 Aligned_cols=102 Identities=24% Similarity=0.320 Sum_probs=61.4
Q ss_pred EEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecCC
Q 027975 41 VLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLH 120 (216)
Q Consensus 41 ~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~~ 120 (216)
..+|.-..+|.+|..+ |.| .|.+.....+....|.|..+. .| +|+|+-+.|+.||.....
T Consensus 32 ~~~LYcr~~g~~LqI~----~dG----~V~Gt~~~~~~~s~lei~sv~-----------~G-~V~L~g~~sg~yL~mn~~ 91 (142)
T 3p6j_A 32 EVLLKSTETGQYLRIN----PDG----TVDGTRDRSDTHIQFQISPEG-----------NG-EVLLKSTETGQYLRINPD 91 (142)
T ss_dssp CEEEEETTTCCEEEEC----TTS----BEEEECCTTCGGGCEEEEEEE-----------TT-EEEEEETTTTEEEEECTT
T ss_pred EEEEEEeCCCEEEEEC----CCC----CEeeecCCCCCceEEEEEEcc-----------CC-EEEEEEecCCEEEeECCC
Confidence 3467776667777775 332 344444323556666666542 34 799999999999987532
Q ss_pred CCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 121 ASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 121 ~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
..|.+... ..+.-....+...+ .-.+.++.+.+|.||+.++.
T Consensus 92 -------G~l~Gs~~--~t~ecsflEi~~en-------~y~v~i~g~~sg~YLamnk~ 133 (142)
T 3p6j_A 92 -------GTVDGTRD--RSDTHIQFQISPEG-------NGEVLLKSTETGQYLRINPD 133 (142)
T ss_dssp -------SBEEEECC--TTCGGGCEEEEECS-------TTCEEEEETTTCCEEEECTT
T ss_pred -------CCEeeccc--CCCCceEEEEEeec-------CcEEEEEEecCCEEEEECCC
Confidence 45666542 11222233332222 24567888999999998754
No 58
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=37.53 E-value=92 Score=23.71 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=39.2
Q ss_pred CCEEEEEeCC--CCC-----CeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCC
Q 027975 39 GTVLKLMHEK--TKF-----RLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRT 111 (216)
Q Consensus 39 Gd~I~L~h~~--T~~-----~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T 111 (216)
|-.+|+++.. |+. +|..+ |.| .|.|..+ .+....|.|+.+.. .+|+|+.+.|
T Consensus 5 g~~~R~~~LY~~~~~g~~~~~LqI~----~dG----~V~Gt~d-~~~~siLei~sv~~------------g~V~I~gv~s 63 (162)
T 1pwa_A 5 GDPIRLRHLYTSGPHGLSSCFLRIR----ADG----VVDCARG-QSAHSLLEIKAVAL------------RTVAIKGVHS 63 (162)
T ss_dssp --CEEEEEEEECCTTSCCCEEEEEC----TTS----BEEEESS-CCGGGCEEEEEEET------------TEEEEEETTT
T ss_pred CCceEEEEEEEccCCCCceeEEEEC----CCC----cEeCCcC-CCCccEEEEEeecC------------CEEEEEEccc
Confidence 5567777764 342 66665 333 3555544 56667777776532 5899999999
Q ss_pred CCeEEecC
Q 027975 112 RKWLHSHL 119 (216)
Q Consensus 112 ~~~L~sh~ 119 (216)
+.||.-..
T Consensus 64 ~~YLcMn~ 71 (162)
T 1pwa_A 64 VRYLCMGA 71 (162)
T ss_dssp CCEEEECG
T ss_pred CcEEEEcC
Confidence 99998764
No 59
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=36.27 E-value=93 Score=24.46 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=40.9
Q ss_pred CCEEEEEeCCC--CC-----CeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCC
Q 027975 39 GTVLKLMHEKT--KF-----RLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRT 111 (216)
Q Consensus 39 Gd~I~L~h~~T--~~-----~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T 111 (216)
|..+|+++..+ +. +|..+ |.| .|.|..+ .+....|.|+.+. . -+|+|+.+.|
T Consensus 17 g~~~R~~qLY~rtg~g~~~~~LqI~----~dG----~V~Gt~d-~s~~siLei~sv~-----------~-G~V~IkGv~S 75 (194)
T 2p23_A 17 GDPIRLRHLYTSGPHGLSSCFLRIR----ADG----VVDCARG-QSAHSLLEIKAVA-----------L-RTVAIKGVHS 75 (194)
T ss_dssp -CCCEEEEEEEECTTSCCEEEEEEC----TTS----BEEEESS-CCTTTCEEEEEEE-----------T-TEEEEEETTT
T ss_pred CCccEEEEEEEccCCCCcceEEEEC----CCC----cEeCccC-CCcccEEEEEecc-----------C-CEEEEEEccc
Confidence 67888888644 43 66665 333 4555554 5667778777653 2 4899999999
Q ss_pred CCeEEecC
Q 027975 112 RKWLHSHL 119 (216)
Q Consensus 112 ~~~L~sh~ 119 (216)
+.||.-..
T Consensus 76 ~~YLcMn~ 83 (194)
T 2p23_A 76 VRYLCMGA 83 (194)
T ss_dssp CCEEEECG
T ss_pred CcEEEECC
Confidence 99998764
No 60
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=35.27 E-value=1.2e+02 Score=21.87 Aligned_cols=49 Identities=18% Similarity=0.355 Sum_probs=33.5
Q ss_pred CCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 50 KFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 50 ~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
|.+|..+ |.| .|.+..+ .++...|.|+.+. .| .|+|+.+.|+.||.-+.
T Consensus 15 g~~LqI~----~dG----~V~Gt~~-~~~~s~l~~~sv~-----------~g-~V~I~gv~s~~YLcmn~ 63 (128)
T 1ijt_A 15 GFHLQAL----PDG----RIGGAHA-DTRDSLLELSPVE-----------RG-VVSIFGVASRFFVAMSS 63 (128)
T ss_dssp CEEEEEC----TTS----CEEEESS-CCGGGCEEEEEEE-----------TT-EEEEEETTTTEEEEECT
T ss_pred CeEEEEC----CCC----cEecccC-CCccceEEEEecc-----------CC-EEEEEEcccCcEEEEcC
Confidence 6777776 333 3555554 3336777777553 34 89999999999998764
No 61
>1sr4_C CDT C, cytolethal distending toxin protein C; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1
Probab=34.39 E-value=81 Score=24.23 Aligned_cols=128 Identities=10% Similarity=0.071 Sum_probs=77.0
Q ss_pred eCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeee-eCCEEEEEeCCCCCeEE
Q 027975 38 YGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIK-SGTIIRLQHMRTRKWLH 116 (216)
Q Consensus 38 ~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~-~gd~IrL~H~~T~~~L~ 116 (216)
.-..+.||+..||--|+- ..|..+ +-....|.|+...-.. .+.+. .+-.|+++++.++..|.
T Consensus 16 ~tp~fsiRsl~TG~~l~~--~~~~~~------------~~e~~NW~l~ei~l~~---~d~~~~~~G~VqFvn~~t~tCL~ 78 (166)
T 1sr4_C 16 PPPRISLRSLLTAQPVKN--DHYDSH------------NYLSTHWELIDYKGKE---YEKLRDGGTLVQFKVVGAAKCFA 78 (166)
T ss_dssp CCCEEEEEETTTCCBCCC--SSSCTT------------SGGGGCEEEEECCCCT---TCTTCTTCEEEEEECTTSSEEEC
T ss_pred CCCcEEEEecccCccccc--cccccc------------ChhhCCcEEEEeccCc---cccccCCCCeEEEEeCCCCeeee
Confidence 456799999999998763 122211 1233458888654322 23332 27789999999999996
Q ss_pred ecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCCCCCCCCCCCCeeE-EEEe-
Q 027975 117 SHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEV-CGVR- 194 (216)
Q Consensus 117 sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp~~~~~q~EV-~c~~- 194 (216)
.-+. .--+|-. +....|.|..- .+..|+|+.+.++..|.+ .+ | +..-+ -|..
T Consensus 79 ~~~~-------~~~~C~~-----~~~t~FsiiPT-------ttgAVQIrS~~~~~CI~~-~n--~----~~~gl~~C~~~ 132 (166)
T 1sr4_C 79 FLGK-------GTTDCKD-----TDHTVFNLIPT-------NTGAFLIKDALLGFCITS-HD--F----DDLKLEPCGGS 132 (166)
T ss_dssp SSTT-------SEEETTC-----HHHHCEEEEEB-------TTSCEEEEETTTCCEEEC-CS--T----TCCEEECCCSC
T ss_pred ecCC-------ccccCCC-----ChhceEEEEec-------CCccEEEEecCCCceEee-cC--C----CcEEEeeCCCC
Confidence 5222 1112211 24456887553 446799999999999998 43 2 11222 3542
Q ss_pred C----CCCCCcEEEeeee
Q 027975 195 E----KRADNVWLAAEGV 208 (216)
Q Consensus 195 ~----~~~~~~W~i~~~~ 208 (216)
+ ..-+.+|.|..-.
T Consensus 133 d~~~~i~l~~Lw~ItPP~ 150 (166)
T 1sr4_C 133 VSGRTFSLAYQWGILPPF 150 (166)
T ss_dssp CTTCEECGGGCEEEECCS
T ss_pred CcccccCHHHceeeccCc
Confidence 2 2346799986544
No 62
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=32.66 E-value=63 Score=28.49 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=44.3
Q ss_pred CCCeeeeCCEEEEEeC-CC----CCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCC------CCCCeeee
Q 027975 32 ETVEITYGTVLKLMHE-KT----KFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASA------KQGDTIKS 100 (216)
Q Consensus 32 ~~~~V~~Gd~I~L~h~-~T----~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~------~~~~~v~~ 100 (216)
....|..|+.|.|-|. .+ -+|||.-...+-.++ ..=+-++|..+++... ....+|.+
T Consensus 151 ~dlcI~sGs~VaLFNRlrSQTVsTrYL~ve~g~f~ass------------~~W~aF~I~lvd~~~~~~~~~~~~~g~I~Y 218 (422)
T 3iag_C 151 ADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASS------------QQWGAFYIHLLDDDESEGEEFTVRDGYIHY 218 (422)
T ss_dssp GGGBCBTTEEEEEEECSSSCGGGCEEEEEETTEEEEES------------SCCCCEEEEECCTTCCSSSCCCCBCSBCBT
T ss_pred cceeecCCCEEEEeeccccceeeeeEEEeeCCceEeec------------CceecEEEEEecCcccccccCCcCCCeEEe
Confidence 3467999999999995 33 579997432111111 1111244444433221 13458999
Q ss_pred CCEEEEEeCCCCCeE
Q 027975 101 GTIIRLQHMRTRKWL 115 (216)
Q Consensus 101 gd~IrL~H~~T~~~L 115 (216)
|+.|+|.-..||..|
T Consensus 219 Gs~V~Lv~~~TGv~s 233 (422)
T 3iag_C 219 GQTVKLVCSVTGMAL 233 (422)
T ss_dssp TCEEEEEETTTCCBC
T ss_pred CCEEEEEECCCcccC
Confidence 999999999998743
No 63
>1lgh_A LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=30.21 E-value=21 Score=22.46 Aligned_cols=15 Identities=13% Similarity=0.142 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHhcC
Q 027975 2 AMVFFALAVFLFLGL 16 (216)
Q Consensus 2 ~~~~~~~~~~~~~~~ 16 (216)
+++.++|||++|.+-
T Consensus 27 ~vlAllIH~~lLs~~ 41 (56)
T 1lgh_A 27 TVVAIAVHAAVLAAP 41 (56)
T ss_dssp HHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHcCC
Confidence 466789999999764
No 64
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=30.11 E-value=1.5e+02 Score=23.20 Aligned_cols=64 Identities=20% Similarity=0.351 Sum_probs=44.1
Q ss_pred eeeCCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeE
Q 027975 36 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWL 115 (216)
Q Consensus 36 V~~Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L 115 (216)
.--|.+.+|.-. +|.||..+ |.| .|.|..+..+....|.|..+.. -+|+|+.+.|+.||
T Consensus 13 ~l~g~~rqLYcr-~G~hLqI~----~dG----~V~GT~~~~s~~slLei~sv~~------------GvV~IkGv~S~~YL 71 (193)
T 3hbw_A 13 QLKGIVTKLYSR-QGYHLQLQ----ADG----TIDGTKDEDSTYTLFNLIPVGL------------RVVAIQGVQTKLYL 71 (193)
T ss_dssp CEEEEEEEEEET-TSCEEEEC----TTS----CEEEESCTTCGGGCEEEEEEET------------TEEEEEETTTCCEE
T ss_pred cccceeeEEEEc-CCeEEEEc----CCC----cEEcccCCCCCceEEEEEeccC------------CEEEEEEeeceeEE
Confidence 335767677776 58888886 333 3666654345667788876532 47999999999999
Q ss_pred EecCC
Q 027975 116 HSHLH 120 (216)
Q Consensus 116 ~sh~~ 120 (216)
.-...
T Consensus 72 cMn~~ 76 (193)
T 3hbw_A 72 AMNSE 76 (193)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 87643
No 65
>2y9f_A LSL-150, hemolytic lectin LSLA; sugar binding protein; 1.47A {Laetiporus sulphureus} PDB: 2y9g_A*
Probab=29.38 E-value=1.7e+02 Score=21.64 Aligned_cols=118 Identities=18% Similarity=0.171 Sum_probs=65.4
Q ss_pred CCEEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEec
Q 027975 39 GTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 118 (216)
Q Consensus 39 Gd~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh 118 (216)
|=-+||.|..+.+-|-+....- .+|...+......+.|...+..... .. -..-++...|++-|.|-
T Consensus 10 glyfRll~f~S~~Vi~a~~~~s------p~v~~~~v~~~y~dQ~F~lI~g~ge-~~-------G~yaIkSk~Tg~vlfsr 75 (150)
T 2y9f_A 10 GLYFRLLGFASRQVIFARNSPS------PDVGLSPVNDQATDQYFSLIYGTGE-HA-------GLYAIKSKATGKVLFSR 75 (150)
T ss_dssp TCCBEEEETTTCEEEEECSSSS------CCEEEEEGGGCCGGGCEEEEECCGG-GT-------TCEEEEETTTCCEEEEC
T ss_pred ceeeeeeccceeeEEEecCCCC------ccccccccccccCcEEEEEeccCCC-cC-------ceEEEEecCcCcEEEEe
Confidence 4446777777766666654332 2343333212333444444443211 11 23555668899999886
Q ss_pred CCCCCCCCceEEEEecCCCCCCCCCc-EEEEEecCCceeccCCcEEEEEccCCceeccCCCCCC
Q 027975 119 LHASPISGNLEISCFGGEEESDTGDY-WRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQ 181 (216)
Q Consensus 119 ~~~~p~s~~~EVs~~~~~~~~d~~~~-W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~~~lp 181 (216)
..+-| -|.|... .+.-.|. +.+|.-. + ....-|||+-..|+|.|.+....-|
T Consensus 76 ~~~~p-----~vG~~d~--Dgky~dnwF~~E~gk-~---~l~g~frLv~pst~~~LvsRT~~~p 128 (150)
T 2y9f_A 76 RPAEP-----YVGQIDG--DGRYPDNWFKIEPGK-T---YLSKYFRLVQPSTGTALVSRTHLQP 128 (150)
T ss_dssp SSSSS-----SEEEESS--SSCSGGGCBEEEECC-G---GGTTCEEEEETTTTEEEEECSSSSS
T ss_pred cCCCC-----ccceeCC--CCccccccEEEccCC-c---cccceEEEEeecCCcEEEeccCCCc
Confidence 54433 3666542 2223344 4666532 1 3456799999999999998754334
No 66
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=28.81 E-value=4e+02 Score=25.64 Aligned_cols=92 Identities=16% Similarity=0.331 Sum_probs=51.8
Q ss_pred EEEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeC-CCCCeEEecC
Q 027975 41 VLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHM-RTRKWLHSHL 119 (216)
Q Consensus 41 ~I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~-~T~~~L~sh~ 119 (216)
..+|+++.++.+|-+.. .+..++...|..+......+-.|+|+.... -.++|++. .++..|-...
T Consensus 319 ~Y~IrN~~sgk~L~~~~--~~s~~G~~~V~~~~~~gs~~Q~W~i~~~gd------------G~y~I~N~~~sglvLDv~~ 384 (841)
T 2vse_A 319 AYKIYNRETPTLLLSWN--SNSSNGEQVIRGYTESGSNNQYWTIEKNVN------------GFYKFRNLSDPSKILDLKD 384 (841)
T ss_dssp EEEEEESSSTTCEEECC--TTCGGGCCBCEEECCCSCGGGCEEEEECTT------------SCEEEEESSCTTCEEEEGG
T ss_pred EEEEEEcCCCCEEEEcC--CCCCCCceEEEEecCCCCcccEEEEEECCC------------ceEEEEecCCCceEEEecc
Confidence 67999999988887743 222222334444544244556899996542 14888888 6788887653
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCcEEEEEe
Q 027975 120 HASPISGNLEISCFGGEEESDTGDYWRVMIE 150 (216)
Q Consensus 120 ~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~ 150 (216)
-.. ..| -.|..+.. .+..+..|+|+..
T Consensus 385 gst-anG-T~Vq~~~~--ngs~~Q~W~i~~~ 411 (841)
T 2vse_A 385 GNT-LNK-TPLVVSSE--NSSSSQEWLIEKT 411 (841)
T ss_dssp GCC-STT-CBEEEECC--CSCGGGCEEEEEC
T ss_pred CcC-CCC-CEEEEecC--CCCcccceecccc
Confidence 211 122 12222322 1234556887653
No 67
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=27.82 E-value=1.8e+02 Score=21.43 Aligned_cols=51 Identities=18% Similarity=0.295 Sum_probs=36.2
Q ss_pred CCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 49 TKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 49 T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
||.+|..+ |.| .|.+.....+....|.|+.+. .| .|+|+.+.|+.||.-..
T Consensus 23 ~g~~LqI~----~dG----~V~Gt~~~~~~~s~l~~~sv~-----------~g-~V~I~gv~s~~YLcmn~ 73 (145)
T 1nun_A 23 TKYFLKIE----KNG----KVSGTKKENCPYSILEITSVE-----------IG-VVAVKAINSNYYLAMNK 73 (145)
T ss_dssp TSCEEEEC----TTS----CEEEECCSCCTTSCEEEEEEE-----------TT-EEEEEETTTTEEEEECT
T ss_pred CCeEEEEC----CCC----cEeeecCCCCCceeEEEEEec-----------CC-eEEEEEcccCcEEEEcC
Confidence 46778776 333 466665544567788887552 35 89999999999998754
No 68
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=25.78 E-value=91 Score=27.97 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=41.3
Q ss_pred CeeeeCCEEEEEeC-CC----CCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCC--------CCCCeeee
Q 027975 34 VEITYGTVLKLMHE-KT----KFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASA--------KQGDTIKS 100 (216)
Q Consensus 34 ~~V~~Gd~I~L~h~-~T----~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~--------~~~~~v~~ 100 (216)
.-|..|++|.|-|. .+ -+|||.-...+-.++ ..=.-++|..+++... ....+|.+
T Consensus 198 lcI~sGs~VaLFNRlRSQTVsTrYL~Ve~g~f~ass------------~~W~aF~I~Lvd~~~~~~e~~~f~~~dg~I~Y 265 (477)
T 3brd_A 198 LCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASS------------TKWGAFTIHLFDDERGLQETDNFAVRDGFVYY 265 (477)
T ss_dssp HBCBTTSEEEEEECSTTCGGGCEEEEEETTEEEEES------------SCCCCEEEEEECC----CCCSEEEEECSBCBT
T ss_pred eeecCCCEEEeeeeecccccceeEEEecCCceEeec------------CccccEEEEEecCcccccccccccccCCeEEe
Confidence 34899999999995 32 589998532111111 1111234443332111 12347999
Q ss_pred CCEEEEEeCCCCCeE
Q 027975 101 GTIIRLQHMRTRKWL 115 (216)
Q Consensus 101 gd~IrL~H~~T~~~L 115 (216)
|+.|+|....||..|
T Consensus 266 Gs~V~Lvc~~TGv~s 280 (477)
T 3brd_A 266 GSVVKLVDSVTGIAL 280 (477)
T ss_dssp TCEEEEEETTTCCBC
T ss_pred CCEEEEEECCCCccC
Confidence 999999999998754
No 69
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=24.80 E-value=3.1e+02 Score=23.01 Aligned_cols=44 Identities=18% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCCCC-------CCCeeee--C--CEEEEEeCCCCCeEEecCCC
Q 027975 78 ANSYWIVKPILGASAK-------QGDTIKS--G--TIIRLQHMRTRKWLHSHLHA 121 (216)
Q Consensus 78 ~n~~W~I~~~~~~~~~-------~~~~v~~--g--d~IrL~H~~T~~~L~sh~~~ 121 (216)
.+..|++-..++.... .-++|+- | -.++|+|+..|.||......
T Consensus 73 ~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~ 127 (303)
T 1jlx_A 73 PNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVG 127 (303)
T ss_dssp TTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCS
T ss_pred CCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecC
Confidence 5566777764433221 1124442 2 48999999999999887544
No 70
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=24.17 E-value=2.2e+02 Score=20.98 Aligned_cols=59 Identities=24% Similarity=0.353 Sum_probs=42.5
Q ss_pred EEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCC
Q 027975 103 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 177 (216)
Q Consensus 103 ~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~ 177 (216)
..+|.-..++.+|.... ...|.+..+ ..++...|.|....- ..++|+-+.+|.||..+.
T Consensus 32 ~~~LYcr~~g~~LqI~~-------dG~V~Gt~~--~~~~~s~lei~sv~~-------G~V~L~g~~sg~yL~mn~ 90 (142)
T 3p6j_A 32 EVLLKSTETGQYLRINP-------DGTVDGTRD--RSDTHIQFQISPEGN-------GEVLLKSTETGQYLRINP 90 (142)
T ss_dssp CEEEEETTTCCEEEECT-------TSBEEEECC--TTCGGGCEEEEEEET-------TEEEEEETTTTEEEEECT
T ss_pred EEEEEEeCCCEEEEECC-------CCCEeeecC--CCCCceEEEEEEccC-------CEEEEEEecCCEEEeECC
Confidence 46888887789998753 356777753 235677888765522 368999999999998864
No 71
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=22.12 E-value=2.4e+02 Score=20.81 Aligned_cols=60 Identities=23% Similarity=0.341 Sum_probs=43.2
Q ss_pred CEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEecCCceeccCCcEEEEEccCCceeccCC
Q 027975 102 TIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 177 (216)
Q Consensus 102 d~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~~~~~~~~~s~frL~H~~t~~yL~s~~ 177 (216)
...+|+-...+.+|.... ...|.+..+ ..+..+.+.|+...- ..++|+-+.||.||..+.
T Consensus 41 ~~r~LYcr~~g~hLqI~~-------dG~V~Gt~~--~~s~~s~Lei~sv~~-------GvV~I~Gv~tg~yL~Mn~ 100 (142)
T 3p6i_A 41 GEVLLKSTETGQYLRINP-------DGTVDGTRD--RSDTHIQFQISPEGN-------GEVLLKSTETGQYLRINP 100 (142)
T ss_dssp SCEEEEETTTCCEEEECT-------TSBEEEECC--TTCTTCCEEEEEEET-------TEEEEEETTTCCEEEECT
T ss_pred ceEEEEEcCCCEEEEECC-------CCcCcCcCC--CCCCceEEEEEeccC-------CEEEEEEecCceEEeECC
Confidence 356888775588987652 357888763 246778888876532 268999999999999864
No 72
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=22.08 E-value=2.4e+02 Score=20.67 Aligned_cols=83 Identities=24% Similarity=0.362 Sum_probs=50.2
Q ss_pred EEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEE
Q 027975 68 SVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRV 147 (216)
Q Consensus 68 ~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~I 147 (216)
.|.+.....+....|.|.++. .| .|+|+-+.|+.||..... ..|.+... ..+.-..+.+
T Consensus 29 ~V~Gt~~~~~~~s~l~~~sv~-----------~G-~V~I~gv~sg~yL~m~~~-------G~v~Gs~~--~~~ec~flE~ 87 (143)
T 3snv_A 29 TVDGTRDRSDTHIQFQISPEG-----------NG-EVLLKSTETGQYLRINPD-------GTVDGTRD--RSDTHIQFQI 87 (143)
T ss_dssp BEEEESCTTCTTSEEEEEEEE-----------TT-EEEEEETTTTEEEEECTT-------SBEEEECC--TTCTTSEEEE
T ss_pred CEeeecCCCCCceEEEEEecc-----------CC-eEEEEEEcccEEEeECCC-------CCEeeccc--CCCcceEEEE
Confidence 344444434566667776552 23 799999999999987542 34666542 1233333333
Q ss_pred EEecCCceeccCCcEEEEEccCCceeccCCC
Q 027975 148 MIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 178 (216)
Q Consensus 148 E~~~~~~~~~~~s~frL~H~~t~~yL~s~~~ 178 (216)
...+ ...+.++-+.+|.||..+..
T Consensus 88 ~~e~-------~g~v~i~~~~sg~Ylamnk~ 111 (143)
T 3snv_A 88 SPEG-------NGEVLLKSTETGQYLRINPD 111 (143)
T ss_dssp EECS-------TTEEEEEETTTCCEEEECTT
T ss_pred EecC-------CcEEEEEEeeCCEEEEEcCC
Confidence 2221 24567777889999998764
No 73
>3zx7_A Lysenin; toxin, pore forming toxin; HET: PC; 2.84A {Eisenia fetida} PDB: 3zxd_A* 3zxg_A*
Probab=21.15 E-value=3.1e+02 Score=21.74 Aligned_cols=48 Identities=17% Similarity=0.338 Sum_probs=32.1
Q ss_pred CCCeeeeCCEEEEEeC-CCCCeEEecCCCCCCCCceEEEEecCCCCCCCCCcEEEEEec
Q 027975 94 QGDTIKSGTIIRLQHM-RTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEG 151 (216)
Q Consensus 94 ~~~~v~~gd~IrL~H~-~T~~~L~sh~~~~p~s~~~EVs~~~~~~~~d~~~~W~IE~~~ 151 (216)
...++|.||+|.+.+. -|+.-|.-.+-+ .-.|-|.. ...|.|++|..+
T Consensus 248 kalplrhgdvvtf~n~~ft~sglcyddgp-----atnvycld-----kredkwilevvg 296 (309)
T 3zx7_A 248 KSLPLRHGDVVTFMNKYFTRSGLCYDDGP-----ATNVYCLD-----KREDKWILEVVG 296 (309)
T ss_dssp SCSSCBTTCEECEEESSSTTEEEEECCCS-----SCCEEEEE-----TCCCCEEEEECC
T ss_pred ccCccccCcEEEEehhhcccCceeccCCC-----cceeEeec-----ccCcceEEEEEe
Confidence 3568999999999887 444444433322 24588875 356789999874
No 74
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=20.90 E-value=2.8e+02 Score=21.14 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=37.0
Q ss_pred EEEEeCCCCCCeeeecccCCCCCCccEEEeecCCCCCCCcEEEEEcCCCCCCCCCeeeeCCEEEEEeCCCCCeEEecC
Q 027975 42 LKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 119 (216)
Q Consensus 42 I~L~h~~T~~~LhSh~~~y~~~s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~v~~gd~IrL~H~~T~~~L~sh~ 119 (216)
++|.-. ||.+|..+ |.| .|.+.....+....|.|+.+. .| .|+|+.+.|+.||.-..
T Consensus 30 ~qLY~r-~g~~LqI~----~dG----~V~Gt~~~~s~~silei~sv~-----------~g-~V~I~gv~s~~YLcMn~ 86 (174)
T 1ihk_A 30 RQLYCR-TGFHLEIF----PNG----TIQGTRKDHSRFGILEFISIA-----------VG-LVSIRGVDSGLYLGMNE 86 (174)
T ss_dssp EEEEET-TSCEEEEC----TTS----CEEEESSTTCGGGCEEEEEEE-----------TT-EEEEEETTTCCEEEECT
T ss_pred EEEEec-CCcEEEEC----CCC----cEEeecCCCCCcceEEEEecc-----------Cc-eEEEEEcccCcEEEEcC
Confidence 344443 36667775 333 366655434566677777552 23 89999999999998764
Done!