Query 027979
Match_columns 216
No_of_seqs 198 out of 1486
Neff 8.0
Searched_HMMs 13730
Date Mon Mar 25 06:32:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027979.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027979hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nija1 c.37.1.10 (A:2-223) Hy 100.0 3.4E-36 2.5E-40 245.8 14.8 158 1-170 35-204 (222)
2 d1yrba1 c.37.1.10 (A:1-244) AT 98.5 1.5E-09 1.1E-13 86.2 -3.1 121 14-141 63-185 (244)
3 d2qm8a1 c.37.1.10 (A:5-327) Me 97.6 0.00035 2.6E-08 57.8 11.5 91 14-125 105-205 (323)
4 d2p67a1 c.37.1.10 (A:1-327) LA 97.3 0.00017 1.3E-08 59.8 6.1 95 36-151 140-239 (327)
5 d1wf3a1 c.37.1.8 (A:3-180) GTP 95.3 0.019 1.3E-06 42.0 6.4 93 44-150 53-150 (178)
6 d1svia_ c.37.1.8 (A:) Probable 94.2 0.032 2.3E-06 41.2 5.3 66 74-151 104-175 (195)
7 d1xjca_ c.37.1.10 (A:) Molybdo 90.0 0.015 1.1E-06 42.1 -1.4 74 13-89 61-138 (165)
8 d2c78a3 c.37.1.8 (A:9-212) Elo 89.9 0.33 2.4E-05 36.3 6.3 81 43-139 66-147 (204)
9 d2fh5b1 c.37.1.8 (B:63-269) Si 86.2 0.78 5.7E-05 33.5 6.3 48 76-125 72-124 (207)
10 d1udxa2 c.37.1.8 (A:157-336) O 86.2 0.61 4.5E-05 33.3 5.6 98 44-150 49-148 (180)
11 d2qn6a3 c.37.1.8 (A:2-206) Ini 85.0 0.38 2.8E-05 35.6 3.9 68 76-150 110-182 (205)
12 d1u0la2 c.37.1.8 (A:69-293) Pr 84.5 0.33 2.4E-05 37.2 3.3 47 111-161 43-90 (225)
13 d2cxxa1 c.37.1.8 (A:2-185) GTP 83.5 0.89 6.4E-05 32.2 5.4 51 75-125 81-137 (184)
14 d1d2ea3 c.37.1.8 (A:55-250) El 82.7 0.54 3.9E-05 34.9 3.9 91 44-151 66-165 (196)
15 d1puja_ c.37.1.8 (A:) Probable 82.3 0.25 1.9E-05 38.6 1.9 58 75-144 15-73 (273)
16 d1x1ra1 c.37.1.8 (A:10-178) Ra 81.8 3.3 0.00024 28.9 8.0 77 76-161 76-159 (169)
17 d1kk1a3 c.37.1.8 (A:6-200) Ini 81.8 0.76 5.6E-05 33.5 4.5 91 46-150 80-174 (195)
18 d1mkya1 c.37.1.8 (A:2-172) Pro 81.2 0.53 3.9E-05 33.3 3.3 41 76-124 81-124 (171)
19 d1f60a3 c.37.1.8 (A:2-240) Elo 80.2 2.4 0.00017 32.1 7.1 74 44-125 84-160 (239)
20 d1j8yf2 c.37.1.10 (F:87-297) G 79.5 7.8 0.00056 28.7 9.7 108 28-153 77-189 (211)
21 d1g7sa4 c.37.1.8 (A:1-227) Ini 78.7 1.9 0.00014 32.1 6.0 68 43-126 69-139 (227)
22 d1z2aa1 c.37.1.8 (A:8-171) Rab 78.4 2.8 0.0002 29.0 6.5 79 76-161 75-155 (164)
23 d1mkya2 c.37.1.8 (A:173-358) P 77.0 1.5 0.00011 31.0 4.8 68 76-150 92-162 (186)
24 d1xzpa2 c.37.1.8 (A:212-371) T 76.8 1.6 0.00012 30.0 4.7 62 75-151 80-142 (160)
25 d1jnya3 c.37.1.8 (A:4-227) Elo 76.8 1.3 9.8E-05 33.0 4.5 87 44-139 81-171 (224)
26 d1puia_ c.37.1.8 (A:) Probable 75.5 1.1 8.2E-05 31.3 3.6 45 107-151 125-169 (188)
27 d2gjsa1 c.37.1.8 (A:91-258) Ra 75.3 8.8 0.00064 26.4 8.6 75 76-161 72-154 (168)
28 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 75.2 9 0.00066 26.7 8.8 77 75-162 74-161 (184)
29 d1wb1a4 c.37.1.8 (A:1-179) Elo 72.8 1.4 0.0001 31.4 3.6 43 75-125 82-127 (179)
30 d2qy9a2 c.37.1.10 (A:285-495) 70.2 5.7 0.00042 29.5 6.7 112 27-153 73-190 (211)
31 d1e0sa_ c.37.1.8 (A:) ADP-ribo 70.0 13 0.00094 25.5 8.5 91 43-151 55-154 (173)
32 d1lnza2 c.37.1.8 (A:158-342) O 68.6 0.7 5.1E-05 33.0 1.0 31 113-149 121-151 (185)
33 d1zunb3 c.37.1.8 (B:16-237) Su 68.4 3.6 0.00026 30.7 5.1 65 45-125 90-158 (222)
34 d1r5ba3 c.37.1.8 (A:215-459) E 68.0 5.6 0.00041 30.0 6.4 72 45-125 103-178 (245)
35 d2erxa1 c.37.1.8 (A:6-176) di- 67.9 8.6 0.00062 26.3 7.0 98 45-161 51-157 (171)
36 d2g3ya1 c.37.1.8 (A:73-244) GT 67.9 15 0.0011 25.2 8.5 75 76-161 78-160 (172)
37 d1xtqa1 c.37.1.8 (A:3-169) GTP 65.7 11 0.00077 25.7 7.1 70 75-151 75-147 (167)
38 d1ksha_ c.37.1.8 (A:) ADP-ribo 65.2 7.7 0.00056 26.4 6.2 72 43-125 45-119 (165)
39 d3raba_ c.37.1.8 (A:) Rab3a {R 63.3 19 0.0014 24.5 8.4 75 76-161 78-159 (169)
40 d1u8za_ c.37.1.8 (A:) Ras-rela 62.8 19 0.0014 24.4 9.7 99 44-161 52-158 (168)
41 d2bv3a2 c.37.1.8 (A:7-282) Elo 61.3 5.9 0.00043 30.6 5.3 53 75-140 94-149 (276)
42 d1vmaa2 c.37.1.10 (A:82-294) G 60.6 25 0.0018 25.7 8.7 112 28-154 76-193 (213)
43 d1z06a1 c.37.1.8 (A:32-196) Ra 60.3 16 0.0011 24.6 7.2 66 75-151 75-147 (165)
44 d1nrjb_ c.37.1.8 (B:) Signal r 60.1 11 0.00084 26.3 6.6 50 74-125 72-127 (209)
45 d1ls1a2 c.37.1.10 (A:89-295) G 58.4 29 0.0021 25.1 10.1 100 42-160 91-191 (207)
46 d1fzqa_ c.37.1.8 (A:) ADP-ribo 58.3 6.1 0.00044 27.2 4.6 80 44-138 60-142 (176)
47 d1t9ha2 c.37.1.8 (A:68-298) Pr 57.4 2.2 0.00016 32.5 1.9 15 111-125 43-57 (231)
48 d2dy1a2 c.37.1.8 (A:8-274) Elo 56.0 2.1 0.00015 33.2 1.6 64 45-122 68-132 (267)
49 d1ky3a_ c.37.1.8 (A:) Rab-rela 54.0 28 0.002 23.5 8.5 76 77-161 77-163 (175)
50 d1z08a1 c.37.1.8 (A:17-183) Ra 52.9 29 0.0021 23.3 8.1 102 45-161 53-157 (167)
51 d1j6ua2 c.59.1.1 (A:296-446) U 51.4 14 0.001 25.1 5.5 83 56-147 26-109 (151)
52 d2erya1 c.37.1.8 (A:10-180) r- 48.7 34 0.0025 23.0 7.8 79 76-161 77-159 (171)
53 d2gj8a1 c.37.1.8 (A:216-376) P 46.3 1.7 0.00012 29.9 -0.4 13 113-125 116-128 (161)
54 d1g3qa_ c.37.1.10 (A:) Cell di 44.2 44 0.0032 23.4 7.7 66 42-125 110-179 (237)
55 d2atva1 c.37.1.8 (A:5-172) Ras 43.4 15 0.0011 25.1 4.5 97 45-161 51-156 (168)
56 d1r2qa_ c.37.1.8 (A:) Rab5a {H 42.9 43 0.0031 22.4 7.4 75 76-161 79-160 (170)
57 d1zd9a1 c.37.1.8 (A:18-181) AD 41.0 35 0.0025 22.8 6.3 14 75-88 70-83 (164)
58 d1qapa1 c.1.17.1 (A:130-296) Q 40.3 27 0.002 24.6 5.6 42 109-162 98-139 (167)
59 d1x3sa1 c.37.1.8 (A:2-178) Rab 39.0 27 0.002 23.8 5.5 96 46-161 58-161 (177)
60 d1z0ja1 c.37.1.8 (A:2-168) Rab 38.0 24 0.0017 23.8 5.0 95 48-161 57-158 (167)
61 d1egaa1 c.37.1.8 (A:4-182) GTP 34.1 33 0.0024 23.0 5.3 98 45-151 54-152 (179)
62 d1i2ma_ c.37.1.8 (A:) Ran {Hum 33.5 31 0.0023 23.3 5.0 63 76-151 76-143 (170)
63 d1yzqa1 c.37.1.8 (A:14-177) Ra 32.8 23 0.0017 23.7 4.1 95 48-161 53-154 (164)
64 d1pq4a_ c.92.2.2 (A:) Periplas 32.6 23 0.0017 26.8 4.5 43 102-153 43-85 (289)
65 d2f7sa1 c.37.1.8 (A:5-190) Rab 32.3 23 0.0017 24.3 4.1 75 76-161 88-170 (186)
66 d1np6a_ c.37.1.10 (A:) Molybdo 30.2 12 0.00089 25.0 2.1 73 13-87 62-141 (170)
67 d1okkd2 c.37.1.10 (D:97-303) G 29.6 91 0.0066 22.2 10.9 117 28-160 71-193 (207)
68 d1c1ya_ c.37.1.8 (A:) Rap1A {H 29.3 73 0.0053 21.0 6.8 76 76-161 75-158 (167)
69 d1kaoa_ c.37.1.8 (A:) Rap2a {H 29.1 23 0.0017 23.8 3.6 91 46-151 53-146 (167)
70 d1mlda1 c.2.1.5 (A:1-144) Mala 27.4 60 0.0043 21.8 5.6 48 105-152 63-118 (144)
71 d1n0ua2 c.37.1.8 (A:3-343) Elo 27.0 11 0.0008 29.9 1.5 62 48-123 100-162 (341)
72 d2az4a1 d.157.1.10 (A:56-238) 25.8 45 0.0033 22.9 4.8 41 15-58 122-169 (183)
73 d1ixra2 b.40.4.2 (A:1-62) DNA 25.4 13 0.00097 21.7 1.3 13 43-55 13-25 (62)
74 d1th5a1 d.52.8.1 (A:154-226) N 24.7 16 0.0011 22.2 1.6 33 14-50 38-70 (73)
75 d1h65a_ c.37.1.8 (A:) Chloropl 24.2 91 0.0066 22.7 6.6 75 43-126 79-164 (257)
76 d1bvsa3 b.40.4.2 (A:1-63) DNA 23.2 12 0.00088 21.9 0.8 14 43-56 13-26 (63)
77 d1o4ua1 c.1.17.1 (A:104-273) Q 23.1 94 0.0069 21.5 6.1 44 109-161 97-140 (170)
78 d1zj6a1 c.37.1.8 (A:2-178) ADP 23.0 24 0.0017 23.7 2.6 22 113-138 120-141 (177)
79 d1a5za1 c.2.1.5 (A:22-163) Lac 22.5 67 0.0049 21.3 5.0 46 106-151 63-116 (140)
80 d1moza_ c.37.1.8 (A:) ADP-ribo 22.2 37 0.0027 23.0 3.6 35 113-151 122-159 (182)
81 d1ttza_ c.47.1.1 (A:) Hypothet 21.3 21 0.0015 21.5 1.7 14 203-216 60-73 (75)
82 d1wmsa_ c.37.1.8 (A:) Rab9a {H 20.3 1.1E+02 0.0082 20.1 10.1 76 75-161 78-164 (174)
83 d2cmda1 c.2.1.5 (A:1-145) Mala 20.1 1E+02 0.0073 20.6 5.6 46 107-152 66-119 (145)
84 d1ctqa_ c.37.1.8 (A:) cH-p21 R 20.1 56 0.0041 21.6 4.2 74 76-161 75-156 (166)
No 1
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.4e-36 Score=245.84 Aligned_cols=158 Identities=28% Similarity=0.521 Sum_probs=138.6
Q ss_pred Cccc-C---CCceee----eeeeecCCCcEEeecchhHHHHHHHHHHh----cCCCCEEEEecCCCCCcHHHHHHhhcCc
Q 027979 1 MINE-G---EGGALV----EEWVELANGCICCTVKHSLVQALEQLVQR----KERLDHILLETTGLANPAPLASVLWLDD 68 (216)
Q Consensus 1 ~~ne-g---~dg~~~----~~v~eL~~GCiCCsl~~dl~~~L~~l~~~----~~~~d~IiIE~sG~a~P~~i~~~l~~~~ 68 (216)
++|| | +|+.++ ..++++.+||+||+.++++..++..++.+ ..+||+|+||+||+++|.+++..++.++
T Consensus 35 I~Ne~g~~~iD~~~~~~~~~~~~el~~gcicc~~~~~~~~~l~~~~~~~~~~~~~~d~iiIE~sG~~~p~~l~~~~~~~~ 114 (222)
T d1nija1 35 IENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHE 114 (222)
T ss_dssp ECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSH
T ss_pred EEecccchhhhhhhhcccccceEEecCCcceeccchhHHHHHHHHHHHHhhccCCcceeEEeecccchhhHHHHHHHhhh
Confidence 3688 4 455555 36899999999999999999998776642 3579999999999999999999987777
Q ss_pred ccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 69 QLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 69 ~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
.+...+.++++|+|||+.++..++.+ ++.+.+||++||+|||||+|++++ .+++++.++++||+|+|+
T Consensus 115 ~~~~~~~l~~vi~vVDa~~~~~~~~~------~~~~~~Qi~~AD~ivlNK~Dl~~~------~~~~~~~l~~lNP~a~Ii 182 (222)
T d1nija1 115 VLCQRYLLDGVIALVDAVHADEQMNQ------FTIAQSQVGYADRILLTKTDVAGE------AEKLHERLARINARAPVY 182 (222)
T ss_dssp HHHHHEEEEEEEEEEETTTHHHHHHH------CHHHHHHHHTCSEEEEECTTTCSC------THHHHHHHHHHCSSSCEE
T ss_pred cccccccccchhhhhhhhhhhhhhhh------hHHHHHHHHhCCcccccccccccH------HHHHHHHHHHHhCCCeEE
Confidence 77889999999999999999998876 467789999999999999999875 378999999999999999
Q ss_pred EeecCCCChhhhhccCCCCccc
Q 027979 149 RSVRCQVDLSEVLNCRAYDATH 170 (216)
Q Consensus 149 ~~~~~~v~~~~l~~~~~~~~~~ 170 (216)
.+++|++|++.|++.+.|+...
T Consensus 183 ~~~~g~v~~~~ll~~~~~d~e~ 204 (222)
T d1nija1 183 TVTHGDIDLGLLFNTNGFMLEE 204 (222)
T ss_dssp ECCSSCCCGGGGSCCCTTSCCS
T ss_pred EeeCCccCHHHhhCCCCCCccc
Confidence 9999999999999999998754
No 2
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=98.53 E-value=1.5e-09 Score=86.18 Aligned_cols=121 Identities=16% Similarity=0.104 Sum_probs=72.6
Q ss_pred eeecCCCcEEee--cchhHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHH
Q 027979 14 WVELANGCICCT--VKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQ 91 (216)
Q Consensus 14 v~eL~~GCiCCs--l~~dl~~~L~~l~~~~~~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~ 91 (216)
..+.++||.||. ..+.+......+......+++++|+++|..++....... +.+.+....+.++.++|+....+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~g~~~~~~~~~~~---~~~~~~~~~~~~v~vvd~~~~~~~ 139 (244)
T d1yrba1 63 GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFG---VRLMENLPYPLVVYISDPEILKKP 139 (244)
T ss_dssp TCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCSEEEEECCSSHHHHHHSHHH---HHHHHTSSSCEEEEEECGGGCCSH
T ss_pred hhccCCchhhhhHhHHhhHHHHHHHHHhhccccceeeeccccchhHHHHHHHH---HHHHhhccCceEEEEeccccccCc
Confidence 456677887775 233333333333332346899999999998876554432 223455667789999999765432
Q ss_pred HhhcccCCChhHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhh
Q 027979 92 IDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEI 141 (216)
Q Consensus 92 l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~l 141 (216)
-..............|+..++++++||+|+++++ ..+.++.....+
T Consensus 140 ~~~~~~~l~~~~~~~~~~~~~ivvinK~D~~~~~----~~~~~~~~~~~~ 185 (244)
T d1yrba1 140 NDYCFVRFFALLIDLRLGATTIPALNKVDLLSEE----EKERHRKYFEDI 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEEEEECCGGGCCHH----HHHHHHHHHHCH
T ss_pred hhHhhHHHHHHHHHHHhCCCceeeeeccccccHH----HHHHHHHHHHHH
Confidence 2110000001123579999999999999999875 234444444333
No 3
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=97.56 E-value=0.00035 Score=57.75 Aligned_cols=91 Identities=19% Similarity=0.172 Sum_probs=53.4
Q ss_pred eeecC-CCcEEeec-c-----hhHHHHHHH---HHHhcCCCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEE
Q 027979 14 WVELA-NGCICCTV-K-----HSLVQALEQ---LVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVV 83 (216)
Q Consensus 14 v~eL~-~GCiCCsl-~-----~dl~~~L~~---l~~~~~~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vV 83 (216)
+.++. ++|+||.- . +.+...... +++ ...+|+|||||.|+..-..-+..+ .+.++.|+
T Consensus 105 m~~~~~~~~~~ir~~~~~~~~gg~~~~~~~~i~~~~-~~g~d~iiiETVG~gq~e~~~~~~-----------~D~~v~v~ 172 (323)
T d2qm8a1 105 MARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCE-AAGFDVILVETVGVGQSETAVADL-----------TDFFLVLM 172 (323)
T ss_dssp STTGGGCTTEEEECCCCCSSHHHHHHHHHHHHHHHH-HTTCCEEEEEECSSSSCHHHHHTT-----------SSEEEEEE
T ss_pred HHHHhcccceeeccccccccccchhHHHHHHHHhhc-cCCCCeEEEeehhhhhhhhhhhcc-----------cceEEEEe
Confidence 45553 45555532 1 344444443 333 457999999999998543222211 34457777
Q ss_pred cccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCCCC
Q 027979 84 DAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPE 125 (216)
Q Consensus 84 Da~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~~~ 125 (216)
.+....+ +... -..+++.||++|+||+|+.+..
T Consensus 173 ~p~~GD~-iQ~~--------k~gilE~aDi~vvNKaD~~~~~ 205 (323)
T d2qm8a1 173 LPGAGDE-LQGI--------KKGIFELADMIAVNKADDGDGE 205 (323)
T ss_dssp CSCC-------C--------CTTHHHHCSEEEEECCSTTCCH
T ss_pred eccchhh-hhhh--------hhhHhhhhheeeEeccccccch
Confidence 7765432 2111 1268999999999999987764
No 4
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=97.27 E-value=0.00017 Score=59.79 Aligned_cols=95 Identities=19% Similarity=0.213 Sum_probs=53.5
Q ss_pred HHHHhcCCCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEE
Q 027979 36 QLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVI 115 (216)
Q Consensus 36 ~l~~~~~~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~Iv 115 (216)
.+++ ...+|+|+|||.|++.-. +. . ....+.++.|+++.... .+... . ..-++.||++|
T Consensus 140 ~~~~-~~g~d~iliEtvG~gq~e-~~-i---------~~~aD~~l~v~~P~~Gd-~iq~~-----k---~gi~e~aDi~V 198 (327)
T d2p67a1 140 LLCE-AAGYDVVIVETVGVGQSE-TE-V---------ARMVDCFISLQIAGGGD-DLQGI-----K---KGLMEVADLIV 198 (327)
T ss_dssp HHHH-HTTCSEEEEEEECCTTHH-HH-H---------HTTCSEEEEEECC-------CCC-----C---HHHHHHCSEEE
T ss_pred HHHH-hcCCCeEEEeeccccccc-hh-h---------hhccceEEEEecCCCch-hhhhh-----c---hhhhccccEEE
Confidence 3444 457999999999997322 21 0 01234567777776543 22211 1 24578999999
Q ss_pred EccCCCCCCCCccchHHHHHHHHHhhCCC-----CEEEEee
Q 027979 116 LNKVDLVSPERSGDSLDELEKEIHEINSL-----AHVIRSV 151 (216)
Q Consensus 116 lnK~D~v~~~~~~~~l~~i~~~l~~lNP~-----A~iv~~~ 151 (216)
+||+|+-........+..++..++-+++. .+|+.++
T Consensus 199 vNKaD~~~~~~~~~~~~~~~~al~~~~~~~~~w~p~V~~~S 239 (327)
T d2p67a1 199 INKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCS 239 (327)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHSCCSBTTBCCEEEECB
T ss_pred EEeecccchHHHHHHHHHHHHHhhhcccCCCCCcceeEEEE
Confidence 99999876532112334555566655543 3677654
No 5
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=95.28 E-value=0.019 Score=42.00 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=53.0
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh--cc---EEEEcc
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF--AD---VVILNK 118 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~--AD---~IvlnK 118 (216)
....++-+.|....................-..+.++.|+|+..-....+ ..+.+++.. ++ ++|+||
T Consensus 53 ~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~ad~il~v~D~~~~~~~~~--------~~i~~~l~~~~~~~piilv~NK 124 (178)
T d1wf3a1 53 RQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED--------ELVARALKPLVGKVPILLVGNK 124 (178)
T ss_dssp EEEEEEECCCCCCCCSHHHHHHHHHHHHHTSSCSEEEEEEETTSCCCHHH--------HHHHHHHGGGTTTSCEEEEEEC
T ss_pred eeeeecccccccccccccchhcccccccccccccceeeeechhhhhcccc--------cchhhheeccccchhhhhhhcc
Confidence 35678899998766444332111101111123567899999976432211 112233332 23 778899
Q ss_pred CCCCCCCCccchHHHHHHHHHhhCCCCEEEEe
Q 027979 119 VDLVSPERSGDSLDELEKEIHEINSLAHVIRS 150 (216)
Q Consensus 119 ~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~ 150 (216)
+|+.+.. ++..+.++...+...++.+
T Consensus 125 ~Dl~~~~------~~~~~~~~~~~~~~~~~~i 150 (178)
T d1wf3a1 125 LDAAKYP------EEAMKAYHELLPEAEPRML 150 (178)
T ss_dssp GGGCSSH------HHHHHHHHHTSTTSEEEEC
T ss_pred cccccCH------HHHHHHHHhhcccCceEEE
Confidence 9997753 4555667777888887764
No 6
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=94.17 E-value=0.032 Score=41.25 Aligned_cols=66 Identities=17% Similarity=0.240 Sum_probs=39.2
Q ss_pred eeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCCCCCCCCccchHHHHHHHHH---hhCCCCEE
Q 027979 74 VRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVDLVSPERSGDSLDELEKEIH---EINSLAHV 147 (216)
Q Consensus 74 ~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~---~lNP~A~i 147 (216)
..++.++.|+|+....... ..++.+++.... +||+||+|++++.+ .++..+.++ ..++..++
T Consensus 104 ~~~~~vi~viD~~~~~~~~--------~~~~~~~l~~~~~piivv~NK~D~~~~~~----~~~~~~~~~~~l~~~~~~~~ 171 (195)
T d1svia_ 104 EELKAVVQIVDLRHAPSND--------DVQMYEFLKYYGIPVIVIATKADKIPKGK----WDKHAKVVRQTLNIDPEDEL 171 (195)
T ss_dssp TTEEEEEEEEETTSCCCHH--------HHHHHHHHHHTTCCEEEEEECGGGSCGGG----HHHHHHHHHHHHTCCTTSEE
T ss_pred cchhhhhhhhhcccccccc--------ccccccccccccCcceechhhccccCHHH----HHHHHHHHHHHhcccCCCCE
Confidence 4467889999997532221 112334444443 58889999988653 334333332 35788888
Q ss_pred EEee
Q 027979 148 IRSV 151 (216)
Q Consensus 148 v~~~ 151 (216)
+.++
T Consensus 172 ~~~S 175 (195)
T d1svia_ 172 ILFS 175 (195)
T ss_dssp EECC
T ss_pred EEEe
Confidence 7643
No 7
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=90.04 E-value=0.015 Score=42.08 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=46.0
Q ss_pred eeeecCCCcEEeecch----hHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccch
Q 027979 13 EWVELANGCICCTVKH----SLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNL 88 (216)
Q Consensus 13 ~v~eL~~GCiCCsl~~----dl~~~L~~l~~~~~~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~ 88 (216)
....+.++|.||.... .+...+..+ . ...+|+|++|..+.+++.++.- +..+.........+.++.+++....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~D~iivEg~~~~~~~ki~~-~~~~~~~~~~~~~~~iiavv~~~~~ 137 (165)
T d1xjca_ 61 VATAVEGDGLLQLHLRRPLWRLDDVLALY-A-PLRLDLVLVEGYKQERHPKVVL-VRSEEDWASLQHLANIRAVIAWEPL 137 (165)
T ss_dssp SEEEEEETTEEEEEECCSCCCHHHHHHHH-G-GGCCSEEEEECCTTSCSCEEEE-ESSHHHHHHHTTSTTEEEEEESSCC
T ss_pred ccccccChHHHHHHhhccccchhhHHHHH-h-hcccCeEeeecccccCcceeEE-EecccCcccccCCCCEEEEEeCccc
Confidence 4567788888887653 233333333 2 3578999999999998766541 1111122233456788999877654
Q ss_pred H
Q 027979 89 L 89 (216)
Q Consensus 89 ~ 89 (216)
.
T Consensus 138 ~ 138 (165)
T d1xjca_ 138 E 138 (165)
T ss_dssp C
T ss_pred c
Confidence 3
No 8
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=89.91 E-value=0.33 Score=36.27 Aligned_cols=81 Identities=23% Similarity=0.260 Sum_probs=42.9
Q ss_pred CCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEE-EEccCCC
Q 027979 43 RLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVV-ILNKVDL 121 (216)
Q Consensus 43 ~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~I-vlnK~D~ 121 (216)
+..+.||-|.|-.+=..-+ + ...-..|.+|.||||......=... +-.+......--+| ++||+|+
T Consensus 66 ~~~i~iiDtPGh~df~~~~--~------~~~~~aD~avlVvda~~Gv~~qt~~-----~~~~~~~~gi~~iiv~iNK~D~ 132 (204)
T d2c78a3 66 KRHYSHVDCPGHADYIKNM--I------TGAAQMDGAILVVSAADGPMPQTRE-----HILLARQVGVPYIVVFMNKVDM 132 (204)
T ss_dssp SCEEEEEECCCSGGGHHHH--H------HHHTTCSSEEEEEETTTCCCHHHHH-----HHHHHHHTTCCCEEEEEECGGG
T ss_pred CeEEEEEeCCCchhhHHHH--H------HHHHHCCEEEEEEECCCCCcHHHHH-----HHHHHHHcCCCeEEEEEEeccc
Confidence 4567889999976543211 1 2223567899999996543210000 00112222333455 5899999
Q ss_pred CCCCCccchHHHHHHHHH
Q 027979 122 VSPERSGDSLDELEKEIH 139 (216)
Q Consensus 122 v~~~~~~~~l~~i~~~l~ 139 (216)
++.++ ..+++.+.++
T Consensus 133 ~~~~~---~~~~~~~~i~ 147 (204)
T d2c78a3 133 VDDPE---LLDLVEMEVR 147 (204)
T ss_dssp CCCHH---HHHHHHHHHH
T ss_pred CCCHH---HHHHHHHHHH
Confidence 87532 2444444443
No 9
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.20 E-value=0.78 Score=33.46 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=25.2
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhh--cc---EEEEccCCCCCCC
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF--AD---VVILNKVDLVSPE 125 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~--AD---~IvlnK~D~v~~~ 125 (216)
.+.++.|+|+......+..... ....+..+... -+ +|+.||+|+.++.
T Consensus 72 ~~~~i~v~D~~d~~~~~~~~~~--~l~~~l~~~~~~~~~~pilvv~NK~Dl~~a~ 124 (207)
T d2fh5b1 72 ARAVVFVVDSAAFQREVKDVAE--FLYQVLIDSMALKNSPSLLIACNKQDIAMAK 124 (207)
T ss_dssp EEEEEEEEETTTHHHHHHHHHH--HHHHHHHHHHTSTTCCEEEEEEECTTSTTCC
T ss_pred ccccceEEEcccccccHHHHHH--HHHHHHHhHHHhhcCCcEEEEEECcccCCCC
Confidence 4568999999876654432100 00111111111 12 4566999998754
No 10
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=86.17 E-value=0.61 Score=33.26 Aligned_cols=98 Identities=20% Similarity=0.222 Sum_probs=47.9
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHH-HHhhcccCCChhHH-HHHHhhccEEEEccCCC
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLF-QIDKYRHLSSYPEA-IHQIAFADVVILNKVDL 121 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~-~l~~~~~~~~~~~~-~~QI~~AD~IvlnK~D~ 121 (216)
....++-+.|+.....-...+. ...+......+.++.++|+..... .+..... ..... ..+...-=++++||+|+
T Consensus 49 ~~~~~~DtpG~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~p~iiv~NK~D~ 125 (180)
T d1udxa2 49 ERFTLADIPGIIEGASEGKGLG-LEFLRHIARTRVLLYVLDAADEPLKTLETLRK--EVGAYDPALLRRPSLVALNKVDL 125 (180)
T ss_dssp CEEEEEECCCCCCCGGGSCCSC-HHHHHHHTSSSEEEEEEETTSCHHHHHHHHHH--HHHHHCHHHHHSCEEEEEECCTT
T ss_pred CeEEEcCCCeeecCchHHHHHH-HHHHHHHHhhhhhhhhcccccccccchhhhhh--hhhccccccchhhhhhhhhhhhh
Confidence 3567788999765432211110 011222334456778888754321 1111000 00000 01112224678899999
Q ss_pred CCCCCccchHHHHHHHHHhhCCCCEEEEe
Q 027979 122 VSPERSGDSLDELEKEIHEINSLAHVIRS 150 (216)
Q Consensus 122 v~~~~~~~~l~~i~~~l~~lNP~A~iv~~ 150 (216)
.+++ ..+.+.+.+.. ...+++.+
T Consensus 126 ~~~~----~~~~~~~~~~~--~~~~~~~i 148 (180)
T d1udxa2 126 LEEE----AVKALADALAR--EGLAVLPV 148 (180)
T ss_dssp SCHH----HHHHHHHHHHT--TTSCEEEC
T ss_pred hhHH----HHHHHHHHHHh--cCCeEEEE
Confidence 9874 35666666664 34566653
No 11
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=84.97 E-value=0.38 Score=35.60 Aligned_cols=68 Identities=22% Similarity=0.262 Sum_probs=33.2
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhhc---c-EEEEccCCCCCCCCccchHHHHHHHHHhhCC-CCEEEEe
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFA---D-VVILNKVDLVSPERSGDSLDELEKEIHEINS-LAHVIRS 150 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~A---D-~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP-~A~iv~~ 150 (216)
.+.+|.||||......-. -.+...++... - +|++||+|+++..+.......+.+.++..++ .+++++.
T Consensus 110 ad~ailvVda~~gi~~~~-------t~e~~~~~~~~~i~~iIV~vNK~Dl~~~~~~~~~~~~~~~~l~~~~~~~~p~ipi 182 (205)
T d2qn6a3 110 MDGAILVVAANEPFPQPQ-------TREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPV 182 (205)
T ss_dssp CSEEEEEEETTSCSSCHH-------HHHHHHHHHHTTCCCEEEEEECGGGSCHHHHHHHHHHHHHHHTTSTTTTCCEEEC
T ss_pred cccccccccccccccchh-------HHHHHHHHHHcCCceeeeccccCCCccchHHHHHHHHHHHHhccccCCCCeEEEE
Confidence 466788888865310000 01222333322 3 3458999999865321222334444544444 3556543
No 12
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.45 E-value=0.33 Score=37.24 Aligned_cols=47 Identities=17% Similarity=0.361 Sum_probs=29.8
Q ss_pred ccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEee-cCCCChhhhh
Q 027979 111 ADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSV-RCQVDLSEVL 161 (216)
Q Consensus 111 AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~-~~~v~~~~l~ 161 (216)
-=+||+||+|+++++ ..+.+.+.........+++.++ .....++.|.
T Consensus 43 ~pvIvlnK~DL~~~~----~~~~~~~~~~~~~~~~~v~~vSa~~~~g~~~L~ 90 (225)
T d1u0la2 43 ETVMVINKMDLYDED----DLRKVRELEEIYSGLYPIVKTSAKTGMGIEELK 90 (225)
T ss_dssp EEEEEECCGGGCCHH----HHHHHHHHHHHHTTTSCEEECCTTTCTTHHHHH
T ss_pred CEEEEEeCcccCCHH----HHHHHHHhhcccccceeEEEeccccchhHhhHH
Confidence 447888999999864 3566666666666666776544 2333344433
No 13
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=83.54 E-value=0.89 Score=32.19 Aligned_cols=51 Identities=24% Similarity=0.262 Sum_probs=29.6
Q ss_pred eeccEEEEEcccchHHHHhhcccC--CCh-hHHHHHHhhcc---EEEEccCCCCCCC
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHL--SSY-PEAIHQIAFAD---VVILNKVDLVSPE 125 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~--~~~-~~~~~QI~~AD---~IvlnK~D~v~~~ 125 (216)
.++.++.|+|+............. ... .++.+.+...+ +||+||+|+++..
T Consensus 81 ~~d~~~~vvD~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~p~iiv~NK~D~~~~~ 137 (184)
T d2cxxa1 81 NIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNV 137 (184)
T ss_dssp GCCEEEEEEETTHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCEEEEEECGGGCSCH
T ss_pred ccchheeeeeccccchhhhhhhhccccHHHHHHHHHHHHcCCCEEEEEeeeehhhhH
Confidence 357789999998654433221100 001 12344555554 7889999998653
No 14
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=82.74 E-value=0.54 Score=34.88 Aligned_cols=91 Identities=22% Similarity=0.236 Sum_probs=46.0
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHH-HHhhcccCCChhHHHHHHhhccEE-EEccCCC
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLF-QIDKYRHLSSYPEAIHQIAFADVV-ILNKVDL 121 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~-~l~~~~~~~~~~~~~~QI~~AD~I-vlnK~D~ 121 (216)
..+-+|-+.|-.+ +.... ....-..|.++.||||..... +-.. +-.+...+...-+| ++||+|+
T Consensus 66 ~~~~~iDtPGh~~---f~~~~-----~~~~~~aD~allVVda~~G~~~QT~~------~~~~a~~~~~~~iIv~iNK~D~ 131 (196)
T d1d2ea3 66 RHYAHTDCPGHAD---YVKNM-----ITGTAPLDGCILVVAANDGPMPQTRE------HLLLARQIGVEHVVVYVNKADA 131 (196)
T ss_dssp CEEEEEECSSHHH---HHHHH-----HHTSSCCSEEEEEEETTTCSCHHHHH------HHHHHHHTTCCCEEEEEECGGG
T ss_pred eeEEeecCcchHH---HHHHH-----HHHHhhcCeEEEEEEcCCCCchhHHH------HHHHHHHhcCCcEEEEEecccc
Confidence 4566777777543 22211 122244678899999975321 1000 10111222334555 5899999
Q ss_pred CCCCCccchHH----HHHHHHHhhCC---CCEEEEee
Q 027979 122 VSPERSGDSLD----ELEKEIHEINS---LAHVIRSV 151 (216)
Q Consensus 122 v~~~~~~~~l~----~i~~~l~~lNP---~A~iv~~~ 151 (216)
++.++ ..+ +++..+..++. .++++..+
T Consensus 132 ~~~~~---~~~~i~~~i~~~l~~~~~~~~~~pii~iS 165 (196)
T d1d2ea3 132 VQDSE---MVELVELEIRELLTEFGYKGEETPIIVGS 165 (196)
T ss_dssp CSCHH---HHHHHHHHHHHHHHHTTSCTTTSCEEECC
T ss_pred cccHH---HHHHHHHHHHHHHHHhCCCcccCEEEEEE
Confidence 87532 233 34445554433 36676643
No 15
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=82.33 E-value=0.25 Score=38.57 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=34.1
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHh-hccEEEEccCCCCCCCCccchHHHHHHHHHhhCCC
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA-FADVVILNKVDLVSPERSGDSLDELEKEIHEINSL 144 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~-~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~ 144 (216)
..|-|+.|+||.......+ +.+.+-++ --=++|+||+|+++.+ ..++..+..+..+..
T Consensus 15 ~~DvIl~V~DaR~P~ss~~--------~~l~~~~~~Kp~IlVlNK~DLv~~~----~~~~w~~~f~~~~~~ 73 (273)
T d1puja_ 15 LIDIVYELVDARIPMSSRN--------PMIEDILKNKPRIMLLNKADKADAA----VTQQWKEHFENQGIR 73 (273)
T ss_dssp GCSEEEEEEETTSTTTTSC--------HHHHHHCSSSCEEEEEECGGGSCHH----HHHHHHHHHHTTTCC
T ss_pred hCCEEEEEEECCCCCCCCC--------HHHHHHHcCCCeEEEEECccCCchH----HHHHHHHHHHhcCCc
Confidence 3566899999975442211 12222222 2347888999999874 345566666555443
No 16
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.81 E-value=3.3 Score=28.88 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=44.0
Q ss_pred eccEEEEEcccchHHHH--hhcccCCChhHHHHHHhhcc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEe
Q 027979 76 LDSIITVVDAKNLLFQI--DKYRHLSSYPEAIHQIAFAD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRS 150 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l--~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~ 150 (216)
.+.++.|.|...-...- ... +.++.++....+ +++.||+|+...... ..+++.+..++.| ++.+++
T Consensus 76 ~~~~llv~d~~d~~Sf~~~~~~-----~~~i~~~~~~~~~p~ilvgnK~Dl~~~~~v--~~e~~~~~~~~~~--~~~~e~ 146 (169)
T d1x1ra1 76 GDGFLIVYSVTDKASFEHVDRF-----HQLILRVKDRESFPMILVANKVDLMHLRKV--TRDQGKEMATKYN--IPYIET 146 (169)
T ss_dssp CSEEEEEEETTCHHHHHTHHHH-----HHHHHHHHTSSCCCEEEEEECTTCSTTCCS--CHHHHHHHHHHHT--CCEEEE
T ss_pred ccEEEEecccccchhhhccchh-----hHHHHhhccccCccEEEEecccchhhhcee--ehhhHHHHHHHcC--CEEEEE
Confidence 46788888887543221 110 112223322223 466799998776432 3466777777776 577776
Q ss_pred ec--CCCChhhhh
Q 027979 151 VR--CQVDLSEVL 161 (216)
Q Consensus 151 ~~--~~v~~~~l~ 161 (216)
+. +++..+.++
T Consensus 147 Sak~~~~nV~~~F 159 (169)
T d1x1ra1 147 SAKDPPLNVDKTF 159 (169)
T ss_dssp BCSSSCBSHHHHH
T ss_pred cCCCCCcCHHHHH
Confidence 63 556666655
No 17
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=81.78 E-value=0.76 Score=33.46 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=46.2
Q ss_pred EEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchH--HHHhhcccCCChhHHHHHHhhcc-EEEEccCCCC
Q 027979 46 HILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLL--FQIDKYRHLSSYPEAIHQIAFAD-VVILNKVDLV 122 (216)
Q Consensus 46 ~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~--~~l~~~~~~~~~~~~~~QI~~AD-~IvlnK~D~v 122 (216)
+.+|-+.|-.+ +..... ......+.++.|||+.... .+... +-.+...+..-. +|++||+|++
T Consensus 80 ~~~iDtPGh~~---f~~~~~-----~~~~~~d~~ilvvda~~g~~~~~t~e------~~~~~~~~~~~~iiv~inK~D~~ 145 (195)
T d1kk1a3 80 VSFIDAPGHEA---LMTTML-----AGASLMDGAILVIAANEPCPRPQTRE------HLMALQIIGQKNIIIAQNKIELV 145 (195)
T ss_dssp EEEEECSSHHH---HHHHHH-----HCGGGCSEEEEEEETTSCSSCHHHHH------HHHHHHHHTCCCEEEEEECGGGS
T ss_pred Eeeeccchhhh---hhHHhh-----cccccccccccccchhhhhhhhhhHH------HHHHHHHhcCccceeeeecccch
Confidence 56777777432 222111 1223456778888887642 11111 111223333334 4469999999
Q ss_pred CCCCccchHHHHHHHHHhhCC-CCEEEEe
Q 027979 123 SPERSGDSLDELEKEIHEINS-LAHVIRS 150 (216)
Q Consensus 123 ~~~~~~~~l~~i~~~l~~lNP-~A~iv~~ 150 (216)
+..+.....+.+.+.+...++ .+++++.
T Consensus 146 d~~~~~~~~~~~~~~~~~~~~~~~~iIpi 174 (195)
T d1kk1a3 146 DKEKALENYRQIKEFIEGTVAENAPIIPI 174 (195)
T ss_dssp CHHHHHHHHHHHHHHHTTSTTTTCCEEEC
T ss_pred hhHHHHHHHHHHHHHhccccCCCCeEEEE
Confidence 864322234455566665554 3566654
No 18
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=81.18 E-value=0.53 Score=33.30 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=23.0
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCCCCCC
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVDLVSP 124 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v~~ 124 (216)
.+-++.++|+........ .++.++++..+ +|++||+|+.++
T Consensus 81 ad~i~~~~~~~~~~~~~~--------~~~~~~l~~~~~pviiv~NK~Dl~~~ 124 (171)
T d1mkya1 81 ADLVLFVVDGKRGITKED--------ESLADFLRKSTVDTILVANKAENLRE 124 (171)
T ss_dssp CSEEEEEEETTTCCCHHH--------HHHHHHHHHHTCCEEEEEESCCSHHH
T ss_pred CcEEEEeecccccccccc--------cccccccccccccccccchhhhhhhh
Confidence 445677888764322211 12334444333 667899999765
No 19
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.20 E-value=2.4 Score=32.13 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=40.4
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCC--hhHHHHHHhhccE-EEEccCC
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSS--YPEAIHQIAFADV-VILNKVD 120 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~--~~~~~~QI~~AD~-IvlnK~D 120 (216)
..+.||-|.|=.|=..-+. ...-..|..|.||||..-...-.-...... +-.+.+++..-.+ |++||+|
T Consensus 84 ~~i~iiDtPGH~df~~~~~--------~g~~~~D~ailvvda~~G~~e~g~~~~~QT~eh~~~~~~~gv~~iiv~iNKmD 155 (239)
T d1f60a3 84 YQVTVIDAPGHRDFIKNMI--------TGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMD 155 (239)
T ss_dssp EEEEEEECCCCTTHHHHHH--------HSSSCCSEEEEEEECSHHHHHHHTCTTSHHHHHHHHHHHTTCCEEEEEEECGG
T ss_pred EEEEEEECCCcHHHHHHHH--------HHHHHhCEEEEEEECCCCccccccCchHhHHHHHHHHHHcCCCeEEEEEECCC
Confidence 4589999999985532211 233567889999999854321100000000 0011223333354 4699999
Q ss_pred CCCCC
Q 027979 121 LVSPE 125 (216)
Q Consensus 121 ~v~~~ 125 (216)
+++.+
T Consensus 156 ~~~~d 160 (239)
T d1f60a3 156 SVKWD 160 (239)
T ss_dssp GGTTC
T ss_pred CCCCC
Confidence 98865
No 20
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=79.48 E-value=7.8 Score=28.67 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHH--hcCCCCEEEEecCCCCCcH---HHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChh
Q 027979 28 HSLVQALEQLVQ--RKERLDHILLETTGLANPA---PLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYP 102 (216)
Q Consensus 28 ~dl~~~L~~l~~--~~~~~d~IiIE~sG~a~P~---~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~ 102 (216)
.++...+.+-+. +....|+|+|=|.|...-. ..++-+. .+...+..+.++.|+||..-.+.+.. .
T Consensus 77 ~~~~~~~~~a~~~~~~~~~d~IlIDTaGr~~~~~~~~~~~el~---~~~~~~~~~~~~LVl~a~~~~~~~~~------~- 146 (211)
T d1j8yf2 77 KDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMK---NIYEAIKPDEVTLVIDASIGQKAYDL------A- 146 (211)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEEECCCSCCTTCHHHHHHHHH---HHHHHHCCSEEEEEEEGGGGGGHHHH------H-
T ss_pred hhhhHHHHHHHHHhhccCCceEEEecCCcCccchhhHHHHHHH---HHHhhcCCceEEEEEecccCcchHHH------H-
Confidence 456555544211 1346899999999984211 1122111 12233445678999999876544322 1
Q ss_pred HHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecC
Q 027979 103 EAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRC 153 (216)
Q Consensus 103 ~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~ 153 (216)
....+...-+-+|+||.|.... .-.+...+.+ -+.+|.....|
T Consensus 147 ~~~~~~~~~~~lI~TKlDet~~------~G~~l~~~~~--~~lPi~~it~G 189 (211)
T d1j8yf2 147 SKFNQASKIGTIIITKMDGTAK------GGGALSAVAA--TGATIKFIGTG 189 (211)
T ss_dssp HHHHHHCTTEEEEEECTTSCSC------HHHHHHHHHT--TTCCEEEEECS
T ss_pred hhhhcccCcceEEEecccCCCc------ccHHHHHHHH--HCcCEEEEeCC
Confidence 1122333446699999998654 3555555544 34677665565
No 21
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=78.68 E-value=1.9 Score=32.08 Aligned_cols=68 Identities=21% Similarity=0.153 Sum_probs=39.6
Q ss_pred CCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh---ccEEEEccC
Q 027979 43 RLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF---ADVVILNKV 119 (216)
Q Consensus 43 ~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~---AD~IvlnK~ 119 (216)
...+.+|=|.|-.+= . ..........|.+|.||||..-..... .+...++.. -=+|++||+
T Consensus 69 ~~~~~~iDtPGh~~f-------~-~~~~~~~~~~D~~ilVvda~~g~~~~~--------~~~~~~~~~~~~p~iivlNK~ 132 (227)
T d1g7sa4 69 LPGLFFIDTPGHEAF-------T-TLRKRGGALADLAILIVDINEGFKPQT--------QEALNILRMYRTPFVVAANKI 132 (227)
T ss_dssp CCEEEEECCCTTSCC-------T-TSBCSSSBSCSEEEEEEETTTCCCHHH--------HHHHHHHHHTTCCEEEEEECG
T ss_pred ccccccccccceecc-------c-ccchhcccccceEEEEEecccCcccch--------hHHHHHhhcCCCeEEEEEECc
Confidence 345778888885321 1 111223345788999999975321111 122334433 347899999
Q ss_pred CCCCCCC
Q 027979 120 DLVSPER 126 (216)
Q Consensus 120 D~v~~~~ 126 (216)
|+++...
T Consensus 133 D~~~~~~ 139 (227)
T d1g7sa4 133 DRIHGWR 139 (227)
T ss_dssp GGSTTCC
T ss_pred cCCCchh
Confidence 9988653
No 22
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.44 E-value=2.8 Score=29.01 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=42.4
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEE-ccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec-C
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVIL-NKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR-C 153 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~Ivl-nK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~ 153 (216)
.+.++.|+|..+-... .+.. .-++++.++....-+|++ ||+|+.++.+. ..+++++..++.+ +++++++. .
T Consensus 75 ~~~~i~v~d~~~~~s~-~~~~--~~~~~i~~~~~~~~iilVgnK~Dl~~~~~v--~~~~~~~~~~~~~--~~~~e~Sak~ 147 (164)
T d1z2aa1 75 AQACVLVFSTTDRESF-EAIS--SWREKVVAEVGDIPTALVQNKIDLLDDSCI--KNEEAEGLAKRLK--LRFYRTSVKE 147 (164)
T ss_dssp CCEEEEEEETTCHHHH-HTHH--HHHHHHHHHHCSCCEEEEEECGGGGGGCSS--CHHHHHHHHHHHT--CEEEECBTTT
T ss_pred CceEEEEEeccchhhh-hhcc--cccccccccCCCceEEEeeccCCcccceee--eehhhHHHHHHcC--CEEEEeccCC
Confidence 5667889988765432 1100 002233344445566655 99999765432 3355666666654 57776543 2
Q ss_pred CCChhhhh
Q 027979 154 QVDLSEVL 161 (216)
Q Consensus 154 ~v~~~~l~ 161 (216)
..+.++++
T Consensus 148 g~~v~e~f 155 (164)
T d1z2aa1 148 DLNVSEVF 155 (164)
T ss_dssp TBSSHHHH
T ss_pred CcCHHHHH
Confidence 33444443
No 23
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=77.00 E-value=1.5 Score=30.98 Aligned_cols=68 Identities=26% Similarity=0.305 Sum_probs=37.4
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCC---CCEEEEe
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINS---LAHVIRS 150 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP---~A~iv~~ 150 (216)
.+.++.|+|+.......... +-........--++++||+|++...+ ....++.+.+++..+ .++++.+
T Consensus 92 ~dvii~v~d~~~~~~~~~~~-----~~~~~~~~~~~~i~v~nK~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~v 162 (186)
T d1mkya2 92 ADVVVIVLDATQGITRQDQR-----MAGLMERRGRASVVVFNKWDLVVHRE--KRYDEFTKLFREKLYFIDYSPLIFT 162 (186)
T ss_dssp CSEEEEEEETTTCCCHHHHH-----HHHHHHHTTCEEEEEEECGGGSTTGG--GCHHHHHHHHHHHCGGGTTSCEEEC
T ss_pred CCEEEEeecccccchhhHHH-----HHHHHHHcCCceeeeccchhhhcchh--hhhhhHHHHHHHHhcccCCCeEEEE
Confidence 45689999997532211110 11112333444577789999976653 245666666665443 4566654
No 24
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=76.83 E-value=1.6 Score=30.00 Aligned_cols=62 Identities=23% Similarity=0.365 Sum_probs=37.3
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc-EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEee
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD-VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD-~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
..+.++.|+|+....... ...+..++.... ++++||+|+.+... .+++.+ .+.+..+++.++
T Consensus 80 ~ad~ii~v~d~~~~~~~~--------~~~~~~~~~~~~~i~~~~k~d~~~~~~----~~~~~~---~~~~~~~~~~vS 142 (160)
T d1xzpa2 80 KADIVLFVLDASSPLDEE--------DRKILERIKNKRYLVVINKVDVVEKIN----EEEIKN---KLGTDRHMVKIS 142 (160)
T ss_dssp HCSEEEEEEETTSCCCHH--------HHHHHHHHTTSSEEEEEEECSSCCCCC----HHHHHH---HHTCSTTEEEEE
T ss_pred hCCEEEEEEeCCCCcchh--------hhhhhhhcccccceeeeeeccccchhh----hHHHHH---HhCCCCcEEEEE
Confidence 356789999998643221 112334544444 45579999988753 344444 456667777643
No 25
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=76.79 E-value=1.3 Score=33.01 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=41.9
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhH---HHHHHhhccE-EEEccC
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPE---AIHQIAFADV-VILNKV 119 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~---~~~QI~~AD~-IvlnK~ 119 (216)
...-+|-|.|=.+=..-.. ......|+.|.||||......-... ......+ +...+..--+ |++||+
T Consensus 81 ~~i~iiDtPGH~df~~~~~--------~g~~~~D~allVVda~~G~~~~t~~-~~~qt~e~l~~~~~~~~~~iIv~iNK~ 151 (224)
T d1jnya3 81 YFFTIIDAPGHRDFVKNMI--------TGASQADAAILVVSAKKGEYEAGMS-VEGQTREHIILAKTMGLDQLIVAVNKM 151 (224)
T ss_dssp CEEEECCCSSSTTHHHHHH--------HTSSCCSEEEEEEECSTTHHHHHHS-TTCHHHHHHHHHHHTTCTTCEEEEECG
T ss_pred ceeEEeeCCCcHHHHHHHH--------HHHHhhceEEEEEecccCccccccc-ccchhHHHHHHHHHhCCCceEEEEEcc
Confidence 3456677888764432221 2234468899999998753211000 0000001 1122222234 459999
Q ss_pred CCCCCCCccchHHHHHHHHH
Q 027979 120 DLVSPERSGDSLDELEKEIH 139 (216)
Q Consensus 120 D~v~~~~~~~~l~~i~~~l~ 139 (216)
|+..+......++.+...++
T Consensus 152 D~~~~~~~~~~~~~v~~~i~ 171 (224)
T d1jnya3 152 DLTEPPYDEKRYKEIVDQVS 171 (224)
T ss_dssp GGSSSTTCHHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHH
Confidence 99875432223344444444
No 26
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=75.51 E-value=1.1 Score=31.35 Aligned_cols=45 Identities=18% Similarity=0.196 Sum_probs=30.6
Q ss_pred HHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEee
Q 027979 107 QIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 107 QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
+.....++++||+|+++..+.....+.+++.++...+..+++.++
T Consensus 125 ~~~~~~~~v~~k~D~~~~~~~~~~~~~~~~~l~~~~~~~~~i~vS 169 (188)
T d1puia_ 125 DSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFS 169 (188)
T ss_dssp HTTCCEEEEEECGGGSCHHHHHHHHHHHHHHHGGGCSCEEEEECB
T ss_pred hccccccchhhhhhccCHHHHHHHHHHHHHHHHhhCCCCcEEEEe
Confidence 344567788899999987543234456666777777777777643
No 27
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.26 E-value=8.8 Score=26.38 Aligned_cols=75 Identities=20% Similarity=0.160 Sum_probs=39.5
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhh----cc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF----AD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~----AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
.+++|.|.|..+-...- + ...+..++.. .+ ++|.||+|+.+..+. ...+.++..+..+ ++.+
T Consensus 72 ~d~~ilv~d~t~~~s~~-~------~~~~~~~i~~~~~~~~~piilvgnK~Dl~~~~~v--~~~~~~~~~~~~~--~~~~ 140 (168)
T d2gjsa1 72 GDAYVIVYSVTDKGSFE-K------ASELRVQLRRARQTDDVPIILVGNKSDLVRSREV--SVDEGRACAVVFD--CKFI 140 (168)
T ss_dssp CSEEEEEEETTCHHHHH-H------HHHHHHHHHHHCC--CCCEEEEEECTTCGGGCCS--CHHHHHHHHHHHT--SEEE
T ss_pred hhhhceecccccccccc-c------cccccchhhcccccccceEEEeecccchhhhcch--hHHHHHHHHHhcC--CEEE
Confidence 46789999987654321 1 2233344432 22 455599998765332 2344555555444 5777
Q ss_pred Eee-cCCCChhhhh
Q 027979 149 RSV-RCQVDLSEVL 161 (216)
Q Consensus 149 ~~~-~~~v~~~~l~ 161 (216)
+++ ..+.+.+.++
T Consensus 141 e~Sak~~~~v~~~f 154 (168)
T d2gjsa1 141 ETSAALHHNVQALF 154 (168)
T ss_dssp ECBTTTTBSHHHHH
T ss_pred EEeCCCCcCHHHHH
Confidence 654 2234444444
No 28
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=75.24 E-value=9 Score=26.67 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=41.3
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhc----------cEEEEccCCCCCCCCccchHHHHHHHHHhhCCC
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFA----------DVVILNKVDLVSPERSGDSLDELEKEIHEINSL 144 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~A----------D~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~ 144 (216)
..+.++.++|...-... .. ...+..++... =++|.||+|+.+... ..+...+.... ...
T Consensus 74 ~~~~~i~~~d~~~~~~~-~~------~~~~~~~i~~~~~~~~~~~ip~ilv~nK~Dl~~~~~---~~~~~~~~~~~-~~~ 142 (184)
T d1vg8a_ 74 GADCCVLVFDVTAPNTF-KT------LDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQV---ATKRAQAWCYS-KNN 142 (184)
T ss_dssp TCSEEEEEEETTCHHHH-HT------HHHHHHHHHHHHCCSSGGGSCEEEEEECTTSSCCCS---CHHHHHHHHHH-TTS
T ss_pred CccEEEEeecccchhhh-hc------chhhHHHHHHHhccccccCCCEEEEEEeecccccch---hHHHHHHHHHH-hcC
Confidence 44778999998754321 11 22223333221 267779999876543 23444444333 446
Q ss_pred CEEEEeec-CCCChhhhhc
Q 027979 145 AHVIRSVR-CQVDLSEVLN 162 (216)
Q Consensus 145 A~iv~~~~-~~v~~~~l~~ 162 (216)
++.++++- .......++.
T Consensus 143 ~~~~e~Sak~~~gI~e~f~ 161 (184)
T d1vg8a_ 143 IPYFETSAKEAINVEQAFQ 161 (184)
T ss_dssp CCEEECBTTTTBSHHHHHH
T ss_pred CeEEEEcCCCCcCHHHHHH
Confidence 77776552 3445666553
No 29
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=72.76 E-value=1.4 Score=31.36 Aligned_cols=43 Identities=26% Similarity=0.222 Sum_probs=25.7
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh---ccEEEEccCCCCCCC
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF---ADVVILNKVDLVSPE 125 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~---AD~IvlnK~D~v~~~ 125 (216)
..+.++.++|+......- ..+...++.. .=++++||+|+++.+
T Consensus 82 ~~d~~ilv~d~~~g~~~~--------~~~~~~~~~~~~~p~iiv~NKiD~~~~~ 127 (179)
T d1wb1a4 82 IIDLALIVVDAKEGPKTQ--------TGEHMLILDHFNIPIIVVITKSDNAGTE 127 (179)
T ss_dssp SCCEEEEEEETTTCSCHH--------HHHHHHHHHHTTCCBCEEEECTTSSCHH
T ss_pred hccccccccccccccchh--------hhhhhhhhhhcCCcceeccccccccCHH
Confidence 356778888887532110 0122233333 347899999999864
No 30
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=70.20 E-value=5.7 Score=29.48 Aligned_cols=112 Identities=11% Similarity=0.058 Sum_probs=61.8
Q ss_pred chhHHHHHHHHHH--hcCCCCEEEEecCCCCCc-HHHHHHhhc-Ccccc--cceeeccEEEEEcccchHHHHhhcccCCC
Q 027979 27 KHSLVQALEQLVQ--RKERLDHILLETTGLANP-APLASVLWL-DDQLE--SAVRLDSIITVVDAKNLLFQIDKYRHLSS 100 (216)
Q Consensus 27 ~~dl~~~L~~l~~--~~~~~d~IiIE~sG~a~P-~~i~~~l~~-~~~l~--~~~~l~~vI~vVDa~~~~~~l~~~~~~~~ 100 (216)
..|+...+.+..+ +...+|.|+|=|.|...- ..+++.+.. ..... .......++.|+||..-...+..
T Consensus 73 ~~d~~~~l~~~~~~a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~------ 146 (211)
T d2qy9a2 73 GADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQ------ 146 (211)
T ss_dssp TCCHHHHHHHHHHHHHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHH------
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHH------
Confidence 3567777766543 134689999999997532 223322210 00000 11123467889999876655432
Q ss_pred hhHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecC
Q 027979 101 YPEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRC 153 (216)
Q Consensus 101 ~~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~ 153 (216)
. ...-+-..-+-+|++|.|-...- -.+.....+. +.+|.....|
T Consensus 147 ~-~~~~~~~~~~~lIlTKlDe~~~~------G~~l~~~~~~--~~Pi~~i~~G 190 (211)
T d2qy9a2 147 A-KLFHEAVGLTGITLTKLDGTAKG------GVIFSVADQF--GIPIRYIGVG 190 (211)
T ss_dssp H-HHHHHHSCCCEEEEECCTTCTTT------THHHHHHHHH--CCCEEEEECS
T ss_pred H-hhhhhccCCceEEEeecCCCCCc------cHHHHHHHHH--CCCEEEEeCC
Confidence 1 11233446788999999986543 2233333322 4567666666
No 31
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=69.95 E-value=13 Score=25.47 Aligned_cols=91 Identities=20% Similarity=0.178 Sum_probs=46.9
Q ss_pred CCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHh---hcc---EEEE
Q 027979 43 RLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA---FAD---VVIL 116 (216)
Q Consensus 43 ~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~---~AD---~Ivl 116 (216)
.....+..+.|...-....... .-..+++|.|+|+........- ...+...+. ..+ +|+.
T Consensus 55 ~~~~~i~D~~g~~~~~~~~~~~--------~~~~~~ii~v~D~s~~~~~~~~------~~~l~~~~~~~~~~~~piiiv~ 120 (173)
T d1e0sa_ 55 NVKFNVWDVGGQDKIRPLWRHY--------YTGTQGLIFVVDCADRDRIDEA------RQELHRIINDREMRDAIILIFA 120 (173)
T ss_dssp TEEEEEEEESCCGGGHHHHGGG--------TTTCCEEEEEEETTCGGGHHHH------HHHHHHHHTSGGGTTCEEEEEE
T ss_pred ceeeEEecCCCcchhhhHHHhh--------hcccceEEEEEecccchhHHHH------HHHHHHHhhhcccccceeeeee
Confidence 3456677788865444333322 2246789999999765432211 111222222 112 5778
Q ss_pred ccCCCCCCCCccchHHHHHHHH--HhhCC-CCEEEEee
Q 027979 117 NKVDLVSPERSGDSLDELEKEI--HEINS-LAHVIRSV 151 (216)
Q Consensus 117 nK~D~v~~~~~~~~l~~i~~~l--~~lNP-~A~iv~~~ 151 (216)
||+|+.+... ..++...+ ..+.. ...+++++
T Consensus 121 NK~Dl~~~~~----~~~i~~~~~~~~~~~~~~~~~e~S 154 (173)
T d1e0sa_ 121 NKQDLPDAMK----PHEIQEKLGLTRIRDRNWYVQPSC 154 (173)
T ss_dssp ECTTSTTCCC----HHHHHHHTTGGGCCSSCEEEEECB
T ss_pred eccccccccc----HHHHHHHHHHHHHHhCCCEEEEee
Confidence 9999976542 34555543 23333 34555543
No 32
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=68.62 E-value=0.7 Score=33.02 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=20.4
Q ss_pred EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEE
Q 027979 113 VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIR 149 (216)
Q Consensus 113 ~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~ 149 (216)
+|++||+|+.+.. +.+....+.+....+++.
T Consensus 121 ivv~NK~Dl~~~~------~~~~~~~~~~~~~~~v~~ 151 (185)
T d1lnza2 121 IIVANKMDMPEAA------ENLEAFKEKLTDDYPVFP 151 (185)
T ss_dssp CBEEECTTSTTHH------HHHHHHHHHCCSCCCBCC
T ss_pred hhhccccchHhHH------HHHHHHHHHhccCCcEEE
Confidence 7899999998753 334444455666666654
No 33
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=68.36 E-value=3.6 Score=30.72 Aligned_cols=65 Identities=23% Similarity=0.195 Sum_probs=36.1
Q ss_pred CEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc----EEEEccCC
Q 027979 45 DHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD----VVILNKVD 120 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD----~IvlnK~D 120 (216)
.+-+|-++|=.+=..-+. ......|.+|.||||......= -.+....+.... +|++||+|
T Consensus 90 ~~~iiD~PGH~dfv~~~~--------~g~~~aD~ailVvda~~G~~~Q--------t~e~~~~~~~~gv~~iiv~vNK~D 153 (222)
T d1zunb3 90 KFIIADTPGHEQYTRNMA--------TGASTCDLAIILVDARYGVQTQ--------TRRHSYIASLLGIKHIVVAINKMD 153 (222)
T ss_dssp EEEEEECCCSGGGHHHHH--------HHHTTCSEEEEEEETTTCSCHH--------HHHHHHHHHHTTCCEEEEEEECTT
T ss_pred EEEEEeccchhhhhhhhc--------cccccCceEEEEeccccCcccc--------hHHHHHHHHHcCCCEEEEEEEccc
Confidence 466788888764422111 2234567789999997543110 011122222222 56789999
Q ss_pred CCCCC
Q 027979 121 LVSPE 125 (216)
Q Consensus 121 ~v~~~ 125 (216)
+++..
T Consensus 154 ~~~~~ 158 (222)
T d1zunb3 154 LNGFD 158 (222)
T ss_dssp TTTSC
T ss_pred ccccc
Confidence 98854
No 34
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=67.98 E-value=5.6 Score=29.95 Aligned_cols=72 Identities=19% Similarity=0.210 Sum_probs=31.7
Q ss_pred CEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHH---HHHhhccE-EEEccCC
Q 027979 45 DHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAI---HQIAFADV-VILNKVD 120 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~---~QI~~AD~-IvlnK~D 120 (216)
.+.+|-+.|-.+= .. ..+......+.+|.||||......-... ....-.+.. ..+..-.+ +++||+|
T Consensus 103 ~i~~iDtPGH~df---~~-----~~~~g~~~aD~ailVVda~~G~~~~~~~-~~~QT~e~l~l~~~~~i~~iiv~iNKmD 173 (245)
T d1r5ba3 103 RFSLLDAPGHKGY---VT-----NMINGASQADIGVLVISARRGEFEAGFE-RGGQTREHAVLARTQGINHLVVVINKMD 173 (245)
T ss_dssp EEEECCCCC-------------------TTSCSEEEEEEECSTTHHHHTTS-TTCCHHHHHHHHHHTTCSSEEEEEECTT
T ss_pred eeeeecccccccc---hh-----hhhhhhhhhcceeeEEEcCCCccCCccc-cccchHHHHHHHHHcCCCeEEEEEEcCC
Confidence 4556666666432 11 1223445677889999997533211000 000011111 11212234 7889999
Q ss_pred CCCCC
Q 027979 121 LVSPE 125 (216)
Q Consensus 121 ~v~~~ 125 (216)
+++.+
T Consensus 174 ~~~~~ 178 (245)
T d1r5ba3 174 EPSVQ 178 (245)
T ss_dssp STTCS
T ss_pred CCccc
Confidence 98654
No 35
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.93 E-value=8.6 Score=26.34 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=50.6
Q ss_pred CEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHh---h--cc---EEEE
Q 027979 45 DHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA---F--AD---VVIL 116 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~---~--AD---~Ivl 116 (216)
..-+..+.|...-..+..... -..+.++.|.|..+-...-. ......++. . .+ +||.
T Consensus 51 ~l~~~d~~g~~~~~~~~~~~~--------~~a~~~ilv~d~~~~~s~~~-------~~~~~~~~~~~~~~~~~~piilVg 115 (171)
T d2erxa1 51 TLQITDTTGSHQFPAMQRLSI--------SKGHAFILVYSITSRQSLEE-------LKPIYEQICEIKGDVESIPIMLVG 115 (171)
T ss_dssp EEEEEECCSCSSCHHHHHHHH--------HHCSEEEEEEETTCHHHHHT-------THHHHHHHHHHHC---CCCEEEEE
T ss_pred eeccccccccccccccccccc--------cceeEEEEEeecccccchhc-------ccchhhhhhhhhccCCCCcEEEEe
Confidence 344566777665554443322 12356899999886543221 122222221 1 22 5556
Q ss_pred ccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 117 NKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 117 nK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
||+|+....+. ..+++++..+..+ ++.++++. .....+.++
T Consensus 116 nK~Dl~~~~~v--~~~e~~~~~~~~~--~~~~e~Sak~~~~v~e~f 157 (171)
T d2erxa1 116 NKCDESPSREV--QSSEAEALARTWK--CAFMETSAKLNHNVKELF 157 (171)
T ss_dssp ECGGGGGGCCS--CHHHHHHHHHHHT--CEEEECBTTTTBSHHHHH
T ss_pred ecccccccccc--cHHHHHHHHHHcC--CeEEEEcCCCCcCHHHHH
Confidence 99998654332 3355666666554 57776542 233444444
No 36
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.88 E-value=15 Score=25.15 Aligned_cols=75 Identities=21% Similarity=0.164 Sum_probs=39.6
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhh----cc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF----AD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~----AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
-+++|.|.|..+-...- + ...+..++.. .+ +||.||+|+.+..+. ..++.++..+..+ ++.+
T Consensus 78 ~~~~ilvfd~t~~~s~~-~------~~~~~~~i~~~~~~~~~piilvgnK~Dl~~~~~v--~~~~~~~~a~~~~--~~~~ 146 (172)
T d2g3ya1 78 GDAYLIVYSITDRASFE-K------ASELRIQLRRARQTEDIPIILVGNKSDLVRCREV--SVSEGRACAVVFD--CKFI 146 (172)
T ss_dssp CSEEEEEEETTCHHHHH-H------HHHHHHHHHTSGGGTTSCEEEEEECTTCGGGCCS--CHHHHHHHHHHHT--CEEE
T ss_pred cceeeeeecccccchhh-h------hhhhhhhhhhccccCCceEEEEeccccccccccc--cHHHHHHHHHHcC--CeEE
Confidence 46788888987654321 1 1122233321 23 566799998665332 3455555555443 6777
Q ss_pred Eee-cCCCChhhhh
Q 027979 149 RSV-RCQVDLSEVL 161 (216)
Q Consensus 149 ~~~-~~~v~~~~l~ 161 (216)
+++ .-..+.+.++
T Consensus 147 e~Sak~g~~i~~~f 160 (172)
T d2g3ya1 147 ETSAAVQHNVKELF 160 (172)
T ss_dssp ECBTTTTBSHHHHH
T ss_pred EEeCCCCcCHHHHH
Confidence 654 2334555544
No 37
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.71 E-value=11 Score=25.74 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=36.5
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEee
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
..+.+|.|.|...-...- ... .-+..+.+.....+ +++.||+|+....+. ..+++++..++++ ++.++++
T Consensus 75 ~~d~~ilv~d~~~~~s~~-~~~--~~~~~i~~~~~~~~~piilvgnK~Dl~~~r~v--~~~~~~~~a~~~~--~~~~e~S 147 (167)
T d1xtqa1 75 DINGYILVYSVTSIKSFE-VIK--VIHGKLLDMVGKVQIPIMLVGNKKDLHMERVI--SYEEGKALAESWN--AAFLESS 147 (167)
T ss_dssp SCCEEEEEEETTCHHHHH-HHH--HHHHHHHHHHCSSCCCEEEEEECTTCGGGCCS--CHHHHHHHHHHHT--CEEEECC
T ss_pred hhhhhhhhcccchhhhhh-hhh--hhhhhhhhcccccccceeeeccccccccccch--hHHHHHHHHHHcC--CEEEEEe
Confidence 456788888987654321 100 00112223333344 466699998654322 3455666666655 5566543
No 38
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=65.17 E-value=7.7 Score=26.38 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=35.4
Q ss_pred CCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccC
Q 027979 43 RLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKV 119 (216)
Q Consensus 43 ~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~ 119 (216)
.....++.++|.. -.+..+ .. ..-..+.++.++|+........... .......+....+ +||.||+
T Consensus 45 ~~~~~~~D~~G~~----~~~~~~-~~---~~~~~~~~i~v~d~~d~~~~~~~~~---~~~~~~~~~~~~~~p~iiv~nK~ 113 (165)
T d1ksha_ 45 GFKLNIWDVGGQK----SLRSYW-RN---YFESTDGLIWVVDSADRQRMQDCQR---ELQSLLVEERLAGATLLIFANKQ 113 (165)
T ss_dssp TEEEEEEEECCSH----HHHTTG-GG---GCTTCSEEEEEEETTCGGGHHHHHH---HHHHHHTCGGGTTCEEEEEEECT
T ss_pred ccceeeeecCcch----hhhhHH-Hh---hhhhhhcceeeeecccchhHHHHHH---hhhhhhhhcccCCCceEEEEecc
Confidence 3456777888842 122221 11 1223577899999875432211100 0111222223333 5666999
Q ss_pred CCCCCC
Q 027979 120 DLVSPE 125 (216)
Q Consensus 120 D~v~~~ 125 (216)
|+.+..
T Consensus 114 Dl~~~~ 119 (165)
T d1ksha_ 114 DLPGAL 119 (165)
T ss_dssp TSTTCC
T ss_pred cccccc
Confidence 997654
No 39
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=63.25 E-value=19 Score=24.45 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=39.2
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHH---HHHh--hcc-EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAI---HQIA--FAD-VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIR 149 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~---~QI~--~AD-~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~ 149 (216)
.+.+|.|+|......... ..... .+.. ..- +|+.||+|+.+.... ..+++++..+..+ ++.++
T Consensus 78 ad~~ilv~d~~~~~s~~~-------~~~~~~~~~~~~~~~~~iivv~nK~D~~~~~~v--~~~~~~~~~~~~~--~~~~e 146 (169)
T d3raba_ 78 AMGFILMYDITNEESFNA-------VQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVV--SSERGRQLADHLG--FEFFE 146 (169)
T ss_dssp CCEEEEEEETTCHHHHHT-------HHHHHHHHHHHCCSCCEEEEEEECTTCGGGCCS--CHHHHHHHHHHHT--CEEEE
T ss_pred CCEEEEEEECccchhhhh-------hhhhhhhhhcccCCcceEEEEEeeccccccccc--chhhhHHHHHHcC--CEEEE
Confidence 467899999987654321 12222 2221 222 345599998654321 2345555555543 67777
Q ss_pred eec-CCCChhhhh
Q 027979 150 SVR-CQVDLSEVL 161 (216)
Q Consensus 150 ~~~-~~v~~~~l~ 161 (216)
++. .....++++
T Consensus 147 ~Sak~g~gv~e~f 159 (169)
T d3raba_ 147 ASAKDNINVKQTF 159 (169)
T ss_dssp CBTTTTBSHHHHH
T ss_pred ecCCCCcCHHHHH
Confidence 653 233444443
No 40
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=62.83 E-value=19 Score=24.44 Aligned_cols=99 Identities=15% Similarity=0.217 Sum_probs=52.2
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHh----hcc---EEEE
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA----FAD---VVIL 116 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~----~AD---~Ivl 116 (216)
+...+.++.|..+...+...... ..+++|.|.|.......- + ...+..++. ..+ +||.
T Consensus 52 ~~l~i~d~~g~~~~~~~~~~~~~--------~~~~~ilv~d~~~~~s~~-~------~~~~~~~i~~~~~~~~~piiivg 116 (168)
T d1u8za_ 52 VQIDILDTAGQEDYAAIRDNYFR--------SGEGFLCVFSITEMESFA-A------TADFREQILRVKEDENVPFLLVG 116 (168)
T ss_dssp EEEEEEECCC---CHHHHHHHHH--------HCSEEEEEEETTCHHHHH-H------HHHHHHHHHHHHCCTTSCEEEEE
T ss_pred ccccccccccccchhhhhhhccc--------ccceeEEEeeccchhhhh-h------HHHHHHHHHHhhCCCCCcEEEEe
Confidence 34456677787766655543321 246789999987654321 1 122333332 222 3566
Q ss_pred ccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 117 NKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 117 nK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
||+|+.+..+. ..+++++..+..+ ++.++++. .....+.++
T Consensus 117 nK~Dl~~~~~v--~~~~~~~~~~~~~--~~~~e~Sak~g~gv~e~f 158 (168)
T d1u8za_ 117 NKSDLEDKRQV--SVEEAKNRADQWN--VNYVETSAKTRANVDKVF 158 (168)
T ss_dssp ECGGGGGGCCS--CHHHHHHHHHHHT--CEEEECCTTTCTTHHHHH
T ss_pred ccccccccccc--cHHHHHHHHHHcC--CeEEEEcCCCCcCHHHHH
Confidence 99998654321 3466677777665 67776542 233444443
No 41
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=61.25 E-value=5.9 Score=30.64 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=30.6
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh---ccEEEEccCCCCCCCCccchHHHHHHHHHh
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF---ADVVILNKVDLVSPERSGDSLDELEKEIHE 140 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~---AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~ 140 (216)
..|+.|.||||......-. ..+.+|... -=++++||+|....+ ..++.+.|++
T Consensus 94 ~~D~avlVvda~~Gv~~~T--------~~~w~~a~~~~lP~i~fINKmDr~~ad-----~~~~l~ei~~ 149 (276)
T d2bv3a2 94 VLDGAIVVFDSSQGVEPQS--------ETVWRQAEKYKVPRIAFANKMDKTGAD-----LWLVIRTMQE 149 (276)
T ss_dssp HCCEEEEEEETTTSSCHHH--------HHHHHHHHTTTCCEEEEEECTTSTTCC-----HHHHHHHHHH
T ss_pred hhhheEEeccccCCcchhH--------HHHHHHHHHcCCCEEEEEecccccccc-----cchhHHHHHH
Confidence 3566788888865432110 112233333 338999999997754 4566666665
No 42
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=60.56 E-value=25 Score=25.74 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=59.9
Q ss_pred hhHHHHHHHHH--HhcCCCCEEEEecCCCCCcH-HHHHHhh-cCccccc--ceeeccEEEEEcccchHHHHhhcccCCCh
Q 027979 28 HSLVQALEQLV--QRKERLDHILLETTGLANPA-PLASVLW-LDDQLES--AVRLDSIITVVDAKNLLFQIDKYRHLSSY 101 (216)
Q Consensus 28 ~dl~~~L~~l~--~~~~~~d~IiIE~sG~a~P~-~i~~~l~-~~~~l~~--~~~l~~vI~vVDa~~~~~~l~~~~~~~~~ 101 (216)
.|+...+.... ....+.|+|+|-|.|...-. .+++.+. .....+. .-....++.|+||..-...+...
T Consensus 76 ~d~~~~~~~~~~~~~~~~~d~ilIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~------ 149 (213)
T d1vmaa2 76 ADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQA------ 149 (213)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHH------
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEEeccccccchHHHHHHHHHHHhhhhhccccccceeEEeeccccCcchhhhh------
Confidence 35555443322 12347899999999986432 2222211 0000010 01135578999998766554321
Q ss_pred hHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecCC
Q 027979 102 PEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRCQ 154 (216)
Q Consensus 102 ~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~~ 154 (216)
....+--..+-+|++|.|-...- -.+...+.+. +.+|.....|+
T Consensus 150 -~~~~~~~~~~~lI~TKlDe~~~~------G~~l~~~~~~--~~Pi~~i~~Gq 193 (213)
T d1vmaa2 150 -KIFKEAVNVTGIILTKLDGTAKG------GITLAIAREL--GIPIKFIGVGE 193 (213)
T ss_dssp -HHHHHHSCCCEEEEECGGGCSCT------THHHHHHHHH--CCCEEEEECSS
T ss_pred -hhhccccCCceEEEecccCCCcc------cHHHHHHHHH--CCCEEEEeCCC
Confidence 11245556889999999975532 2333443333 35666656663
No 43
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.33 E-value=16 Score=24.63 Aligned_cols=66 Identities=18% Similarity=0.180 Sum_probs=37.6
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh------c-cEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEE
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF------A-DVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHV 147 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~------A-D~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~i 147 (216)
..+.+|.|.|..+-...- + ......++.. + =+||.||+|+.++.+. ..+++++..+..| ++.
T Consensus 75 ~~d~~ilv~d~~~~~s~~-~------~~~~~~~i~~~~~~~~~pi~lvgnK~Dl~~~~~v--~~~~~~~~~~~~~--~~~ 143 (165)
T d1z06a1 75 NVHAVVFVYDMTNMASFH-S------LPAWIEECKQHLLANDIPRILVGNKCDLRSAIQV--PTDLAQKFADTHS--MPL 143 (165)
T ss_dssp TCCEEEEEEETTCHHHHH-T------HHHHHHHHHHHCCCSCCCEEEEEECTTCGGGCCS--CHHHHHHHHHHTT--CCE
T ss_pred CCCceEEEEEeehhhhhh-h------hhhhhHHHHhhccCCCCeEEEEeccccchhccch--hHHHHHHHHHHCC--CEE
Confidence 357789999988654321 1 2222333321 1 2356699998765432 3456666666654 577
Q ss_pred EEee
Q 027979 148 IRSV 151 (216)
Q Consensus 148 v~~~ 151 (216)
++++
T Consensus 144 ~e~S 147 (165)
T d1z06a1 144 FETS 147 (165)
T ss_dssp EECC
T ss_pred EEEe
Confidence 7755
No 44
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.09 E-value=11 Score=26.34 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=25.2
Q ss_pred eeeccEEEEEcccchHHHHhhcccCCChhHHH---HHHhhcc---EEEEccCCCCCCC
Q 027979 74 VRLDSIITVVDAKNLLFQIDKYRHLSSYPEAI---HQIAFAD---VVILNKVDLVSPE 125 (216)
Q Consensus 74 ~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~---~QI~~AD---~IvlnK~D~v~~~ 125 (216)
...+.++.++|+......+..... ...... .+....+ +|++||+|+.+..
T Consensus 72 ~~~~~~i~~vd~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~piiiv~NK~D~~~~~ 127 (209)
T d1nrjb_ 72 KFVKGLIFMVDSTVDPKKLTTTAE--FLVDILSITESSCENGIDILIACNKSELFTAR 127 (209)
T ss_dssp GGEEEEEEEEETTSCTTCCHHHHH--HHHHHHHHHHHHSTTCCCEEEEEECTTSTTCC
T ss_pred hhccccceEEEEecccccHHHHHH--HHHHHHHHHHHHHhccCCeEEEEEeecccccC
Confidence 445678888998764322111000 000111 2222222 6788999998764
No 45
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=58.43 E-value=29 Score=25.09 Aligned_cols=100 Identities=19% Similarity=0.140 Sum_probs=55.8
Q ss_pred CCCCEEEEecCCCCCcH-HHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCC
Q 027979 42 ERLDHILLETTGLANPA-PLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVD 120 (216)
Q Consensus 42 ~~~d~IiIE~sG~a~P~-~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D 120 (216)
...|.|+|=|.|...-. ..++.+. .+......+.++.|+|+..-...+.. ...+.+.-.-+-+|++|.|
T Consensus 91 ~~~d~vlIDTaGr~~~d~~~~~el~---~~~~~~~~~~~llv~~a~~~~~~~~~-------~~~f~~~~~~~~~I~TKlD 160 (207)
T d1ls1a2 91 EARDLILVDTAGRLQIDEPLMGELA---RLKEVLGPDEVLLVLDAMTGQEALSV-------ARAFDEKVGVTGLVLTKLD 160 (207)
T ss_dssp HTCCEEEEECCCCSSCCHHHHHHHH---HHHHHHCCSEEEEEEEGGGTHHHHHH-------HHHHHHHTCCCEEEEECGG
T ss_pred ccCcceeecccccchhhhhhHHHHH---HHHhhcCCceEEEEeccccchhHHHH-------HHHHHhhCCCCeeEEeecC
Confidence 46899999999986432 2222221 12333455678999999877655432 1112343456779999999
Q ss_pred CCCCCCccchHHHHHHHHHhhCCCCEEEEeecCCCChhhh
Q 027979 121 LVSPERSGDSLDELEKEIHEINSLAHVIRSVRCQVDLSEV 160 (216)
Q Consensus 121 ~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~~v~~~~l 160 (216)
.... .-.+.......+ .+|.....|++ +++|
T Consensus 161 e~~~------~G~~l~~~~~~~--~Pi~~i~~Gq~-pedl 191 (207)
T d1ls1a2 161 GDAR------GGAALSARHVTG--KPIYFAGVSEK-PEGL 191 (207)
T ss_dssp GCSS------CHHHHHHHHHHC--CCEEEEC-------CC
T ss_pred cccc------chHHHHHHHHHC--CCEEEEeCCCC-hhhc
Confidence 7543 234444444333 57776677764 4443
No 46
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=58.30 E-value=6.1 Score=27.24 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=37.9
Q ss_pred CCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCC
Q 027979 44 LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVD 120 (216)
Q Consensus 44 ~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D 120 (216)
....+..+.|...-........ -.-+.+|.++|+........... ...+...+....+ +|+.||+|
T Consensus 60 ~~~~i~d~~g~~~~~~~~~~~~--------~~~~~ii~v~d~~d~~s~~~~~~---~~~~~~~~~~~~~~pillv~nK~D 128 (176)
T d1fzqa_ 60 FKLNVWDIGGQRKIRPYWRSYF--------ENTDILIYVIDSADRKRFEETGQ---ELTELLEEEKLSCVPVLIFANKQD 128 (176)
T ss_dssp EEEEEEECSSCGGGHHHHHHHH--------TTCSEEEEEEETTCGGGHHHHHH---HHHHHTTCGGGTTCCEEEEEECTT
T ss_pred eeEeEeeccccccchhHHHHHh--------hccceeEEeeccccccchhhhhh---hhhhhhhhhccCCCeEEEEEEecc
Confidence 4455566666544333332211 22467899999876432211000 0111112222222 44569999
Q ss_pred CCCCCCccchHHHHHHHH
Q 027979 121 LVSPERSGDSLDELEKEI 138 (216)
Q Consensus 121 ~v~~~~~~~~l~~i~~~l 138 (216)
+.++.+ ...+.+.+
T Consensus 129 l~~~~~----~~~~~~~~ 142 (176)
T d1fzqa_ 129 LLTAAP----ASEIAEGL 142 (176)
T ss_dssp STTCCC----HHHHHHHT
T ss_pred cccccc----HHHHHHHH
Confidence 987653 35555544
No 47
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=57.42 E-value=2.2 Score=32.50 Aligned_cols=15 Identities=20% Similarity=0.563 Sum_probs=12.1
Q ss_pred ccEEEEccCCCCCCC
Q 027979 111 ADVVILNKVDLVSPE 125 (216)
Q Consensus 111 AD~IvlnK~D~v~~~ 125 (216)
-=+||+||+|+++++
T Consensus 43 ~pvIvlnK~DL~~~~ 57 (231)
T d1t9ha2 43 QPIICITKMDLIEDQ 57 (231)
T ss_dssp EEEEEEECGGGCCCH
T ss_pred CEEEEEecccccccH
Confidence 347889999999864
No 48
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=56.03 E-value=2.1 Score=33.25 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=36.6
Q ss_pred CEEEEecCCCCCcH-HHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCC
Q 027979 45 DHILLETTGLANPA-PLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLV 122 (216)
Q Consensus 45 d~IiIE~sG~a~P~-~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v 122 (216)
.+-+|-|.|-.|=. ++...+ -..|+.|.||||......-... .=....+-...=+|++||+|..
T Consensus 68 ~~n~iDtPGh~dF~~e~~~al---------~~~D~avlvvda~~Gv~~~t~~-----~~~~~~~~~~p~~i~iNk~D~~ 132 (267)
T d2dy1a2 68 RVFLLDAPGYGDFVGEIRGAL---------EAADAALVAVSAEAGVQVGTER-----AWTVAERLGLPRMVVVTKLDKG 132 (267)
T ss_dssp EEEEEECCCSGGGHHHHHHHH---------HHCSEEEEEEETTTCSCHHHHH-----HHHHHHHTTCCEEEEEECGGGC
T ss_pred ceeEEccCchhhhhhhhhhhh---------cccCceEEEeeccCCccchhHH-----HHHhhhhccccccccccccccc
Confidence 45677888876532 222222 3456788999987543211100 0112345556678999999984
No 49
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.03 E-value=28 Score=23.47 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=39.0
Q ss_pred ccEEEEEcccchHHHHhhcccCCChhHHHHHHhhc----------cEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCE
Q 027979 77 DSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFA----------DVVILNKVDLVSPERSGDSLDELEKEIHEINSLAH 146 (216)
Q Consensus 77 ~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~A----------D~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~ 146 (216)
+.++.+.|....... .. ...+.+|+... =+|+.||+|+.+..+. ...+..++..+.+ ...+
T Consensus 77 ~~~ilv~d~~~~~s~-~~------~~~~~~~i~~~~~~~~~~~~piilv~nK~Dl~~~~~~-v~~~~~~~~~~~~-~~~~ 147 (175)
T d1ky3a_ 77 DCCVLVYDVTNASSF-EN------IKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKI-VSEKSAQELAKSL-GDIP 147 (175)
T ss_dssp CEEEEEEETTCHHHH-HT------HHHHHHHHHHHHCCSCTTTCCEEEEEECTTSCGGGCC-SCHHHHHHHHHHT-TSCC
T ss_pred ceEEEEeeccccccc-ch------hhhcchhhhhhhhhcccccCcEEEEecccchhhhhcc-hhHHHHHHHHHHc-CCCe
Confidence 567888898765532 11 22333444211 1577799998764321 1224444444444 3456
Q ss_pred EEEeec-CCCChhhhh
Q 027979 147 VIRSVR-CQVDLSEVL 161 (216)
Q Consensus 147 iv~~~~-~~v~~~~l~ 161 (216)
+++++. -....+.++
T Consensus 148 ~~e~SA~~g~gv~e~f 163 (175)
T d1ky3a_ 148 LFLTSAKNAINVDTAF 163 (175)
T ss_dssp EEEEBTTTTBSHHHHH
T ss_pred EEEEeCCCCcCHHHHH
Confidence 676542 233444544
No 50
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.88 E-value=29 Score=23.31 Aligned_cols=102 Identities=17% Similarity=0.158 Sum_probs=47.4
Q ss_pred CEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHH-hhcc-EEEEccCCCC
Q 027979 45 DHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQI-AFAD-VVILNKVDLV 122 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI-~~AD-~IvlnK~D~v 122 (216)
...+..+.|..+...+.... + -..+.+|.|.|...-... .+... .......+. ..+- +++.||+|+.
T Consensus 53 ~~~~~d~~g~~~~~~~~~~~-----~---~~~~~~i~v~d~~~~~Sf-~~~~~--~~~~~~~~~~~~~~~ilvgnK~Dl~ 121 (167)
T d1z08a1 53 NLAIWDTAGQERFHALGPIY-----Y---RDSNGAILVYDITDEDSF-QKVKN--WVKELRKMLGNEICLCIVGNKIDLE 121 (167)
T ss_dssp EEEEEECCCC-------CCS-----S---TTCSEEEEEEETTCHHHH-HHHHH--HHHHHHHHHGGGSEEEEEEECGGGG
T ss_pred eeeeeccCCcceecccchhh-----c---cCCceeEEEEeCCchhHH-Hhhhh--hhhhcccccccccceeeeccccccc
Confidence 33455666665443332211 1 124678999998765432 11000 011111222 2222 3445999987
Q ss_pred CCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 123 SPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 123 ~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
+..+. ..+++++..++.| ++.++++- ...+.+.++
T Consensus 122 ~~~~v--~~~e~~~~a~~~~--~~~~e~Sak~~~~v~e~F 157 (167)
T d1z08a1 122 KERHV--SIQEAESYAESVG--AKHYHTSAKQNKGIEELF 157 (167)
T ss_dssp GGCCS--CHHHHHHHHHHTT--CEEEEEBTTTTBSHHHHH
T ss_pred ccccc--chHHHHHHHHHcC--CeEEEEecCCCcCHHHHH
Confidence 65432 3466667766654 67776653 344455544
No 51
>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=51.43 E-value=14 Score=25.11 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=44.3
Q ss_pred CcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCCCCCc-cchHHHH
Q 027979 56 NPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVSPERS-GDSLDEL 134 (216)
Q Consensus 56 ~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~~~~~-~~~l~~i 134 (216)
+|.+|..+|. .++..+.=..+|+|+-+..+...-.. .+++..=++.||.++|+...-..++.. +..-+.+
T Consensus 26 ~P~~i~a~l~---a~r~~~~~~~ii~vf~p~~~~r~~~~------~~~~~~~~~~aD~vilt~~y~a~E~~~~~i~~~~i 96 (151)
T d1j6ua2 26 TPDEIRNLLQ---TAKEVFENEKIVVIFQPHRYSRLERE------DGNFAKALQLADEVVVTEVYDAFEEKKNGISGKMI 96 (151)
T ss_dssp SHHHHHHHHH---HHHHHCSSSEEEEEECCBC--------------CHHHHHHTTSSEEEECCCBC---------CHHHH
T ss_pred CHHHHHHHHH---HhhhhhcccceeeeeeccccchhhHH------HHHHHHHhhcccceeeecccccccccccccCHHHH
Confidence 5777777653 22333443468999999877543221 345556678999999986543332210 0112466
Q ss_pred HHHHHhhCCCCEE
Q 027979 135 EKEIHEINSLAHV 147 (216)
Q Consensus 135 ~~~l~~lNP~A~i 147 (216)
.+.++..+..+.+
T Consensus 97 ~~~i~~~~~~~~~ 109 (151)
T d1j6ua2 97 WDSLKSLGKEAYF 109 (151)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHhcCCCeEE
Confidence 6777777776544
No 52
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.67 E-value=34 Score=22.97 Aligned_cols=79 Identities=9% Similarity=0.122 Sum_probs=40.8
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR 152 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~ 152 (216)
.+.++.|.|....... ..... -..+..++....+ +||.||+|+...... ..++..+..+.++ ++.++++-
T Consensus 77 ~~~~ilv~d~~~~~s~-~~~~~--~~~~~~~~~~~~~~p~ilvgnK~Dl~~~~~v--~~~~~~~~~~~~~--~~~~e~Sa 149 (171)
T d2erya1 77 GEGFLLVFSVTDRGSF-EEIYK--FQRQILRVKDRDEFPMILIGNKADLDHQRQV--TQEEGQQLARQLK--VTYMEASA 149 (171)
T ss_dssp CSEEEEEEETTCHHHH-HTHHH--HHHHHHHHHTSSCCSEEEEEECTTCTTSCSS--CHHHHHHHHHHTT--CEEEECBT
T ss_pred cceEEEeeccccccch-hhHHH--HhHHHHhhcccCCCCEEEEEeccchhhhccc--hHHHHHHHHHHcC--CEEEEEcC
Confidence 4667888888765422 11000 0111223332333 466799998665332 3456667776665 46666542
Q ss_pred -CCCChhhhh
Q 027979 153 -CQVDLSEVL 161 (216)
Q Consensus 153 -~~v~~~~l~ 161 (216)
...+.+.++
T Consensus 150 k~~~~i~e~f 159 (171)
T d2erya1 150 KIRMNVDQAF 159 (171)
T ss_dssp TTTBSHHHHH
T ss_pred CCCcCHHHHH
Confidence 334455554
No 53
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=46.30 E-value=1.7 Score=29.86 Aligned_cols=13 Identities=31% Similarity=0.480 Sum_probs=9.0
Q ss_pred EEEEccCCCCCCC
Q 027979 113 VVILNKVDLVSPE 125 (216)
Q Consensus 113 ~IvlnK~D~v~~~ 125 (216)
++|+||+|+.++.
T Consensus 116 ilv~NK~Dl~~~~ 128 (161)
T d2gj8a1 116 TVVRNKADITGET 128 (161)
T ss_dssp EEEEECHHHHCCC
T ss_pred eeccchhhhhhhH
Confidence 5777888876653
No 54
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=44.18 E-value=44 Score=23.41 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=37.7
Q ss_pred CCCCEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccE----EEEc
Q 027979 42 ERLDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADV----VILN 117 (216)
Q Consensus 42 ~~~d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~----Ivln 117 (216)
..+|+|||.+.+...+. ....+. .-|.++.++.+.... +.. .....++++..++ ||+|
T Consensus 110 ~~~d~IiiD~~~~~~~~-~~~~l~---------~aD~viiv~~~~~~s--~~~------~~~~~~~~~~~~~~~~giv~N 171 (237)
T d1g3qa_ 110 DKFDFILIDCPAGLQLD-AMSAML---------SGEEALLVTNPEISC--LTD------TMKVGIVLKKAGLAILGFVLN 171 (237)
T ss_dssp GGCSEEEEECCSSSSHH-HHHHHT---------TCSEEEEEECSCHHH--HHH------HHHHHHHHHHTTCEEEEEEEE
T ss_pred hcCCEEEEccccccccc-chhhhh---------hhhccccccccccee--cch------hhHHHHHHhhhhhhhhhhhhc
Confidence 36899999999876543 223321 246788888876322 111 1122233333332 8999
Q ss_pred cCCCCCCC
Q 027979 118 KVDLVSPE 125 (216)
Q Consensus 118 K~D~v~~~ 125 (216)
|.+..+.+
T Consensus 172 ~~~~~~~~ 179 (237)
T d1g3qa_ 172 RYGRSDRD 179 (237)
T ss_dssp EETSCTTC
T ss_pred ccccccch
Confidence 99876543
No 55
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.35 E-value=15 Score=25.13 Aligned_cols=97 Identities=16% Similarity=0.131 Sum_probs=49.7
Q ss_pred CEEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhH---HHHHH---hhc-cEEEEc
Q 027979 45 DHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPE---AIHQI---AFA-DVVILN 117 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~---~~~QI---~~A-D~Ivln 117 (216)
..-+.+++|.-.-. ...... -.-++++.|.|..+-...-. ... ...+. ... =++|.|
T Consensus 51 ~l~i~D~~g~~~~~-~~~~~~--------~~~~~~ilv~d~~~~~s~~~-------~~~~~~~~~~~~~~~~~piilvgn 114 (168)
T d2atva1 51 SMEILDTAGQEDTI-QREGHM--------RWGEGFVLVYDITDRGSFEE-------VLPLKNILDEIKKPKNVTLILVGN 114 (168)
T ss_dssp EEEEEECCCCCCCH-HHHHHH--------HHCSEEEEEEETTCHHHHHT-------HHHHHHHHHHHHTTSCCCEEEEEE
T ss_pred EEEEeecccccccc-cchhhh--------cccccceeecccCCccchhh-------hhhhcccccccccccCcceeeecc
Confidence 44566777765432 211111 12466889999887543211 111 11111 112 245669
Q ss_pred cCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec--CCCChhhhh
Q 027979 118 KVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR--CQVDLSEVL 161 (216)
Q Consensus 118 K~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~--~~v~~~~l~ 161 (216)
|+|+.+.... ..++.++..++.+ ++.++++- |..+.+.+|
T Consensus 115 K~Dl~~~r~V--~~~e~~~~a~~~~--~~~~e~Saktg~gnV~e~F 156 (168)
T d2atva1 115 KADLDHSRQV--STEEGEKLATELA--CAFYECSACTGEGNITEIF 156 (168)
T ss_dssp CGGGGGGCCS--CHHHHHHHHHHHT--SEEEECCTTTCTTCHHHHH
T ss_pred chhhhhhccC--cHHHHHHHHHHhC--CeEEEEccccCCcCHHHHH
Confidence 9998654321 3456666666664 67777663 333455544
No 56
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.87 E-value=43 Score=22.41 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=38.8
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHhh--cc----EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF--AD----VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIR 149 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~--AD----~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~ 149 (216)
.+.+|.++|..+....-. ......++.. .. +|+.||+|+....+. ..+..++..+..+ ++.++
T Consensus 79 ~~~~ilv~d~~~~~s~~~-------~~~~~~~~~~~~~~~~~iilvgnK~Dl~~~~~v--~~e~~~~~~~~~~--~~~~e 147 (170)
T d1r2qa_ 79 AQAAIVVYDITNEESFAR-------AKNWVKELQRQASPNIVIALSGNKADLANKRAV--DFQEAQSYADDNS--LLFME 147 (170)
T ss_dssp CSEEEEEEETTCHHHHHH-------HHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCS--CHHHHHHHHHHTT--CEEEE
T ss_pred cceEEEEeccchhhHHHH-------HHHHhhhhhhccCCCceEEeecccccccccccc--cHHHHHHHHHhcC--CEEEE
Confidence 456788888877653221 1122233321 12 466699998665432 3455555555433 57776
Q ss_pred eecC-CCChhhhh
Q 027979 150 SVRC-QVDLSEVL 161 (216)
Q Consensus 150 ~~~~-~v~~~~l~ 161 (216)
++.- ....+.++
T Consensus 148 ~SAk~g~~V~e~f 160 (170)
T d1r2qa_ 148 TSAKTSMNVNEIF 160 (170)
T ss_dssp CCTTTCTTHHHHH
T ss_pred eeCCCCCCHHHHH
Confidence 5532 23344443
No 57
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=40.97 E-value=35 Score=22.78 Aligned_cols=14 Identities=29% Similarity=0.475 Sum_probs=10.2
Q ss_pred eeccEEEEEcccch
Q 027979 75 RLDSIITVVDAKNL 88 (216)
Q Consensus 75 ~l~~vI~vVDa~~~ 88 (216)
..+.++.|+|+..-
T Consensus 70 ~~~~~i~v~d~~~~ 83 (164)
T d1zd9a1 70 GVSAIVYMVDAADQ 83 (164)
T ss_dssp TCSEEEEEEETTCG
T ss_pred ccchhhcccccccc
Confidence 35678999998753
No 58
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=40.28 E-value=27 Score=24.61 Aligned_cols=42 Identities=19% Similarity=0.375 Sum_probs=31.3
Q ss_pred hhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecCCCChhhhhc
Q 027979 109 AFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRCQVDLSEVLN 162 (216)
Q Consensus 109 ~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~~v~~~~l~~ 162 (216)
..+|+|.|-|.+ .+++++.++.+||++.+ +. .|.|+++.+-.
T Consensus 98 ~g~diImLDN~~----------pe~~~~av~~i~~~~~l-Ea-SGgI~~~ni~~ 139 (167)
T d1qapa1 98 AGADIIMLDNFN----------TDQMREAVKRVNGQARL-EV-SGNVTAETLRE 139 (167)
T ss_dssp TTCSEEEESSCC----------HHHHHHHHHTTCTTCCE-EE-CCCSCHHHHHH
T ss_pred cCCcEEEecCCC----------HHHHHHHHHhcCCceEE-EE-eCCCCHHHHHH
Confidence 469999997654 26788889999999876 43 47788877653
No 59
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.02 E-value=27 Score=23.77 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=51.1
Q ss_pred EEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHh----hcc---EEEEcc
Q 027979 46 HILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA----FAD---VVILNK 118 (216)
Q Consensus 46 ~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~----~AD---~IvlnK 118 (216)
..+.+++|.-+...+...+. -..+.+|.|+|.......- . ......++. ... +++.||
T Consensus 58 ~~i~Dt~G~~~~~~~~~~~~--------~~~~~ii~v~d~~~~~s~~-~------~~~~~~~i~~~~~~~~~~i~~~~nk 122 (177)
T d1x3sa1 58 LAIWDTAGQERFRTLTPSYY--------RGAQGVILVYDVTRRDTFV-K------LDNWLNELETYCTRNDIVNMLVGNK 122 (177)
T ss_dssp EEEEEECSSGGGCCSHHHHH--------TTCCEEEEEEETTCHHHHH-T------HHHHHHHHTTCCSCSCCEEEEEEEC
T ss_pred EEEEECCCchhhHHHHHHHH--------hcCCEEEEEEECCCccccc-c------chhhhhhhcccccccceeeEEEeec
Confidence 45557777654433333221 2346789999987644321 1 222334442 333 678899
Q ss_pred CCCCCCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 119 VDLVSPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 119 ~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
.|.....- ...+.++..+..+ .++++++. .....++++
T Consensus 123 ~d~~~~~v---~~~~~~~~~~~~~--~~~~e~Sa~tg~gv~e~f 161 (177)
T d1x3sa1 123 IDKENREV---DRNEGLKFARKHS--MLFIEASAKTCDGVQCAF 161 (177)
T ss_dssp TTSSSCCS---CHHHHHHHHHHTT--CEEEECCTTTCTTHHHHH
T ss_pred cccccccc---cHHHHHHHHHHCC--CEEEEEeCCCCCCHHHHH
Confidence 99765432 3456666666655 56776542 233444444
No 60
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.96 E-value=24 Score=23.76 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=46.9
Q ss_pred EEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHH-----hhcc-EEEEccCCC
Q 027979 48 LLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQI-----AFAD-VVILNKVDL 121 (216)
Q Consensus 48 iIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI-----~~AD-~IvlnK~D~ 121 (216)
+..++|.-....+..... -.-+++|.+.|..+-... .+ ......++ ...- ++|.||+|+
T Consensus 57 i~d~~g~~~~~~~~~~~~--------~~~~~~i~v~d~~~~~s~-~~------~~~~~~~~~~~~~~~~~iilvgnK~Dl 121 (167)
T d1z0ja1 57 IWDTAGLERFRALAPMYY--------RGSAAAIIVYDITKEETF-ST------LKNWVRELRQHGPPSIVVAIAGNKCDL 121 (167)
T ss_dssp EEEECCSGGGGGGTHHHH--------TTCSEEEEEEETTCHHHH-HH------HHHHHHHHHHHSCTTSEEEEEEECTTC
T ss_pred eeecCCchhhhHHHHHHH--------hhccceEEEeeechhhhh-hh------HHHhhhhhhhccCCcceEEEecccchh
Confidence 446666654444433221 123678889998654322 11 11111111 1122 366799999
Q ss_pred CCCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 122 VSPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 122 v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
.+.... ..++.++..+..+ ++.++++- ...+.++++
T Consensus 122 ~~~~~v--~~~~~~~~~~~~~--~~~~e~SAk~~~nV~e~f 158 (167)
T d1z0ja1 122 TDVREV--MERDAKDYADSIH--AIFVETSAKNAININELF 158 (167)
T ss_dssp GGGCCS--CHHHHHHHHHHTT--CEEEECBTTTTBSHHHHH
T ss_pred ccccch--hHHHHHHHHHHcC--CEEEEEecCCCCCHHHHH
Confidence 654332 3345556555544 67776542 234444443
No 61
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.13 E-value=33 Score=22.99 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=46.9
Q ss_pred CEEEEecCCCCCcHHHH-HHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCC
Q 027979 45 DHILLETTGLANPAPLA-SVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVS 123 (216)
Q Consensus 45 d~IiIE~sG~a~P~~i~-~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~ 123 (216)
..+++.+.|........ ............-..+.++.++|+......... .-....+-..--++++||.|.+.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~------~~~~l~~~~~~~i~v~~k~d~~~ 127 (179)
T d1egaa1 54 QAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEM------VLNKLREGKAPVILAVNKVDNVQ 127 (179)
T ss_dssp EEEEESSSSCCHHHHHHHHHHHTCCTTSCCCCEEEEEEEEETTCCCHHHHH------HHHHHHSSSSCEEEEEESTTTCC
T ss_pred eeEeecCCCceecchhhhhhhhhhccccchhhcceeEEEEecCccchhHHH------HHHHhhhccCceeeeeeeeeccc
Confidence 44566777765443221 111111111222345566778887765433222 10111111122477889999877
Q ss_pred CCCccchHHHHHHHHHhhCCCCEEEEee
Q 027979 124 PERSGDSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 124 ~~~~~~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
... .+....+.++..-+..++++++
T Consensus 128 ~~~---~~~~~~~~~~~~~~~~~~~~vS 152 (179)
T d1egaa1 128 EKA---DLLPHLQFLASQMNFLDIVPIS 152 (179)
T ss_dssp CHH---HHHHHHHHHHTTSCCSEEEECC
T ss_pred hhh---hhhhHhhhhhhhcCCCCEEEEe
Confidence 642 3444445555555566776643
No 62
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.47 E-value=31 Score=23.32 Aligned_cols=63 Identities=13% Similarity=0.060 Sum_probs=33.1
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHH-HHHhhcc----EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEe
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAI-HQIAFAD----VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRS 150 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~-~QI~~AD----~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~ 150 (216)
.++++.|.|..+-.. +.+ ..... ...+.+. ++|.||+|+...... ++.....+ ..+.+.+++
T Consensus 76 ~~~~ilv~d~~~~~S-f~~------~~~~~~~~~~~~~~~piilvgnK~Dl~~~~~~----~~~~~~~~--~~~~~~~e~ 142 (170)
T d1i2ma_ 76 AQCAIIMFDVTSRVT-YKN------VPNWHRDLVRVCENIPIVLCGNKVDIKDRKVK----AKSIVFHR--KKNLQYYDI 142 (170)
T ss_dssp CCEEEEEEETTSGGG-GTT------HHHHHHHHHHHHCSCCEEEEEECCCCSCSCCT----TTSHHHHS--SCSSEEEEE
T ss_pred ccchhhccccccccc-cch------hHHHHHHHhhccCCCceeeecchhhhhhhhhh----hHHHHHHH--HcCCEEEEE
Confidence 567899999887432 111 22222 2223333 567799999765432 22222322 335666665
Q ss_pred e
Q 027979 151 V 151 (216)
Q Consensus 151 ~ 151 (216)
+
T Consensus 143 S 143 (170)
T d1i2ma_ 143 S 143 (170)
T ss_dssp B
T ss_pred e
Confidence 4
No 63
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.75 E-value=23 Score=23.69 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=48.2
Q ss_pred EEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHh-----hccEEE-EccCCC
Q 027979 48 LLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA-----FADVVI-LNKVDL 121 (216)
Q Consensus 48 iIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~-----~AD~Iv-lnK~D~ 121 (216)
+..+.|.-....+..... -..+.++.+.|......... ......++. .+-+++ .||+|+
T Consensus 53 i~d~~g~~~~~~~~~~~~--------~~~~~~ilv~d~~~~~s~~~-------i~~~~~~~~~~~~~~~~iilvgnK~Dl 117 (164)
T d1yzqa1 53 LWDTAGQERFRSLIPSYI--------RDSAAAVVVYDITNVNSFQQ-------TTKWIDDVRTERGSDVIIMLVGNKTDL 117 (164)
T ss_dssp EEEECCSGGGGGGHHHHH--------TTCSEEEEEEETTCHHHHHT-------HHHHHHHHHHHHTTSSEEEEEEECTTC
T ss_pred ecccCCcchhccchHHHh--------hccceEEEeeccccccchhh-------hHhhHHHHHHhcCCCceEEEEecccch
Confidence 456666554443333221 13456788888876553321 122222221 233444 499998
Q ss_pred CCCCCccchHHHHHHHHHhhCCCCEEEEeec-CCCChhhhh
Q 027979 122 VSPERSGDSLDELEKEIHEINSLAHVIRSVR-CQVDLSEVL 161 (216)
Q Consensus 122 v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~-~~v~~~~l~ 161 (216)
.+.... ..++.++..+..+ ++.++++- .....++++
T Consensus 118 ~~~~~~--~~~~~~~~~~~~~--~~~~e~SAk~g~~v~e~f 154 (164)
T d1yzqa1 118 ADKRQV--SIEEGERKAKELN--VMFIETSAKAGYNVKQLF 154 (164)
T ss_dssp GGGCCS--CHHHHHHHHHHTT--CEEEECCTTTCTTHHHHH
T ss_pred hhhhhh--hHHHHHHHHHHcC--CEEEEecCCCCcCHHHHH
Confidence 765432 4566667766655 56666542 233444444
No 64
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=32.60 E-value=23 Score=26.80 Aligned_cols=43 Identities=16% Similarity=0.301 Sum_probs=30.3
Q ss_pred hHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecC
Q 027979 102 PEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRC 153 (216)
Q Consensus 102 ~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~ 153 (216)
+.-+++|+.||+||.|..++-.. +.+.+++.++..+++....+
T Consensus 43 psd~~~l~~ADliv~~G~~lE~~---------~~~~~~~~~~~~~~v~~~~~ 85 (289)
T d1pq4a_ 43 PQQLAALSEAEAYVLIGLGFEQP---------WLEKLKAANANMKLIDSAQG 85 (289)
T ss_dssp HHHHHHGGGCSEEEECCTTTTTT---------THHHHHHHCSSSEEEETTTT
T ss_pred HHHHHHHhcCCEEEEeCcchhHH---------HHHHHHHhccCCCccccccc
Confidence 44568999999999998765332 33445567889998876543
No 65
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.31 E-value=23 Score=24.34 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=39.6
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHH------hhcc-EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQI------AFAD-VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI------~~AD-~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
.+++|.|.|....... .. ......++ ...- +||.||+|+.+..+. ..+++++..++.+ ++.+
T Consensus 88 ~~~~i~v~d~~~~~s~-~~------~~~~~~~~~~~~~~~~~~iilv~nK~Dl~~~~~v--~~~e~~~~~~~~~--~~~~ 156 (186)
T d2f7sa1 88 AMGFLLMFDLTSQQSF-LN------VRNWMSQLQANAYCENPDIVLIGNKADLPDQREV--NERQARELADKYG--IPYF 156 (186)
T ss_dssp CCEEEEEEETTCHHHH-HH------HHHHHHTCCCCCTTTCCEEEEEEECTTCGGGCCS--CHHHHHHHHHHTT--CCEE
T ss_pred CCEEEEEEeccccccc-ee------eeeccchhhhhccCCCceEEEEeeeccchhhhcc--hHHHHHHHHHHcC--CEEE
Confidence 5789999998764321 11 11111111 1122 466799999665332 3355666666654 6777
Q ss_pred Eeec-CCCChhhhh
Q 027979 149 RSVR-CQVDLSEVL 161 (216)
Q Consensus 149 ~~~~-~~v~~~~l~ 161 (216)
+++- .+.+.+.++
T Consensus 157 e~Sak~~~~i~e~f 170 (186)
T d2f7sa1 157 ETSAATGQNVEKAV 170 (186)
T ss_dssp EEBTTTTBTHHHHH
T ss_pred EEeCCCCCCHHHHH
Confidence 6543 233444444
No 66
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=30.15 E-value=12 Score=25.03 Aligned_cols=73 Identities=15% Similarity=0.049 Sum_probs=39.4
Q ss_pred eeeecCCCcEEeecch------hHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHH-hhcCcccccceeeccEEEEEcc
Q 027979 13 EWVELANGCICCTVKH------SLVQALEQLVQRKERLDHILLETTGLANPAPLASV-LWLDDQLESAVRLDSIITVVDA 85 (216)
Q Consensus 13 ~v~eL~~GCiCCsl~~------dl~~~L~~l~~~~~~~d~IiIE~sG~a~P~~i~~~-l~~~~~l~~~~~l~~vI~vVDa 85 (216)
.+..++.+|.||.... .+...+..+. ....|.+++|..+......+... -..+...........++++++.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 139 (170)
T d1np6a_ 62 QTIVASQQRWALMTETPDEEELDLQFLASRMD--TSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASD 139 (170)
T ss_dssp EEEEECSSEEEEEEECSSSCCCCHHHHHHHSC--GGGCSEEEEESCSSCCSEEEEEECTTSSCCGGGCCCCTTEEEEEES
T ss_pred heeeecCcceEEEeecccccccchHHHHHHhc--ccccCceeEeecccCCCccceeeccccccccccccCCCeEEEEecC
Confidence 3555666666665442 2233333332 34689999999987654333221 1112223344566778888776
Q ss_pred cc
Q 027979 86 KN 87 (216)
Q Consensus 86 ~~ 87 (216)
..
T Consensus 140 ~~ 141 (170)
T d1np6a_ 140 VP 141 (170)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 67
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=29.62 E-value=91 Score=22.24 Aligned_cols=117 Identities=14% Similarity=0.092 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHH--hcCCCCEEEEecCCCCCcH-HHHHHhh-cCccc--ccceeeccEEEEEcccchHHHHhhcccCCCh
Q 027979 28 HSLVQALEQLVQ--RKERLDHILLETTGLANPA-PLASVLW-LDDQL--ESAVRLDSIITVVDAKNLLFQIDKYRHLSSY 101 (216)
Q Consensus 28 ~dl~~~L~~l~~--~~~~~d~IiIE~sG~a~P~-~i~~~l~-~~~~l--~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~ 101 (216)
.|+...+.+... +....|+|+|=|.|...-. .+++.+. ..... .....-..++.|+||..-...+...
T Consensus 71 ~d~~~~~~~~~~~~~~~~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~------ 144 (207)
T d1okkd2 71 TDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQA------ 144 (207)
T ss_dssp CCHHHHHHHHHHHHHHHTCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHH------
T ss_pred ccHHHHHHHHHHHHHHCCCCEEEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHH------
Confidence 466666554321 1236899999999986432 2222211 00000 0112335578999998766554321
Q ss_pred hHHHHHHhhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecCCCChhhh
Q 027979 102 PEAIHQIAFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRCQVDLSEV 160 (216)
Q Consensus 102 ~~~~~QI~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~~v~~~~l 160 (216)
....+.-..+-+|++|.|-...-. .+....... +.+|.....|+- +++|
T Consensus 145 -~~~~~~~~~~~lI~TKlDet~~~G------~~l~~~~~~--~~Pi~~i~~Gq~-p~Dl 193 (207)
T d1okkd2 145 -KKFHEAVGLTGVIVTKLDGTAKGG------VLIPIVRTL--KVPIKFVGVGEG-PDDL 193 (207)
T ss_dssp -HHHHHHHCCSEEEEECTTSSCCCT------THHHHHHHH--CCCEEEEECSSS-TTCE
T ss_pred -HHhhhccCCceEEEeccCCCCCcc------HHHHHHHHH--CCCEEEEeCCCC-hHhC
Confidence 112345567899999999765432 223333322 457766667765 5555
No 68
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.30 E-value=73 Score=21.02 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=40.0
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHH----hhcc---EEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQI----AFAD---VVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI----~~AD---~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
.+++|.|.|..+-... .+ ......++ ...+ ++|.||+|+...... ..++.....++. ...+.+
T Consensus 75 ~~~~ilv~d~~~~~sf-~~------~~~~~~~~~~~~~~~~~p~ilvgnK~Dl~~~~~~--~~~~~~~~~~~~-~~~~~~ 144 (167)
T d1c1ya_ 75 GQGFALVYSITAQSTF-ND------LQDLREQILRVKDTEDVPMILVGNKCDLEDERVV--GKEQGQNLARQW-CNCAFL 144 (167)
T ss_dssp CSEEEEEEETTCHHHH-HT------HHHHHHHHHHHHCCSCCCEEEEEECTTCGGGCCS--CHHHHHHHHHHT-TSCEEE
T ss_pred cceeEEeeeccchhhh-Hh------HHHHHHHHHHhcCCCCCeEEEEEEecCccccccc--chhHHHHHHHHh-CCCEEE
Confidence 4678889998764322 11 22222222 2233 667799998765432 334444544443 456777
Q ss_pred Eeec-CCCChhhhh
Q 027979 149 RSVR-CQVDLSEVL 161 (216)
Q Consensus 149 ~~~~-~~v~~~~l~ 161 (216)
+++. .....+++|
T Consensus 145 e~Sak~g~gv~e~F 158 (167)
T d1c1ya_ 145 ESSAKSKINVNEIF 158 (167)
T ss_dssp ECBTTTTBSHHHHH
T ss_pred EEcCCCCcCHHHHH
Confidence 6542 234444443
No 69
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.09 E-value=23 Score=23.77 Aligned_cols=91 Identities=20% Similarity=0.129 Sum_probs=43.3
Q ss_pred EEEEecCCCCCcHHHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhcc---EEEEccCCCC
Q 027979 46 HILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFAD---VVILNKVDLV 122 (216)
Q Consensus 46 ~IiIE~sG~a~P~~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD---~IvlnK~D~v 122 (216)
.-+..+.|-.....+..... -.-+.++.+.|...-.....-.. -..++...-...+ +||.||+|+.
T Consensus 53 l~~~d~~g~~~~~~~~~~~~--------~~a~~~ilv~d~~~~~s~~~~~~---~~~~~~~~~~~~~~piilvgnK~Dl~ 121 (167)
T d1kaoa_ 53 LEILDTAGTEQFASMRDLYI--------KNGQGFILVYSLVNQQSFQDIKP---MRDQIIRVKRYEKVPVILVGNKVDLE 121 (167)
T ss_dssp EEEEECCCTTCCHHHHHHHH--------HHCSEEEEEEETTCHHHHHHHHH---HHHHHHHHTTTSCCCEEEEEECGGGG
T ss_pred eccccCCCccccccchHHHh--------hcccceeeeeeecchhhhhhhhc---hhhhhhhhccCCCCCEEEEEEccchh
Confidence 34456666555444433321 12356788888875443221100 0011111122233 4567999986
Q ss_pred CCCCccchHHHHHHHHHhhCCCCEEEEee
Q 027979 123 SPERSGDSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 123 ~~~~~~~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
+.... ..++.+...+..| ++.++++
T Consensus 122 ~~~~~--~~~~~~~~~~~~~--~~~~e~S 146 (167)
T d1kaoa_ 122 SEREV--SSSEGRALAEEWG--CPFMETS 146 (167)
T ss_dssp GGCCS--CHHHHHHHHHHHT--SCEEEEC
T ss_pred hcccc--hHHHHHHHHHHcC--CeEEEEC
Confidence 64332 3345555555554 5666654
No 70
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=27.42 E-value=60 Score=21.77 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=31.8
Q ss_pred HHHHhhccEEEEccCCCCCCCCc--------cchHHHHHHHHHhhCCCCEEEEeec
Q 027979 105 IHQIAFADVVILNKVDLVSPERS--------GDSLDELEKEIHEINSLAHVIRSVR 152 (216)
Q Consensus 105 ~~QI~~AD~IvlnK~D~v~~~~~--------~~~l~~i~~~l~~lNP~A~iv~~~~ 152 (216)
.+-++.||+||++=.-.-.+.+. ...++++...+.+.+|.+.++-.++
T Consensus 63 ~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN 118 (144)
T d1mlda1 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (144)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 36689999999983322122111 1345677778889999999887554
No 71
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.99 E-value=11 Score=29.94 Aligned_cols=62 Identities=21% Similarity=0.230 Sum_probs=33.6
Q ss_pred EEecCCCCCcH-HHHHHhhcCcccccceeeccEEEEEcccchHHHHhhcccCCChhHHHHHHhhccEEEEccCCCCC
Q 027979 48 LLETTGLANPA-PLASVLWLDDQLESAVRLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAFADVVILNKVDLVS 123 (216)
Q Consensus 48 iIE~sG~a~P~-~i~~~l~~~~~l~~~~~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~AD~IvlnK~D~v~ 123 (216)
+|=|.|=.|=. ++...+. -.|+.|.||||......-... ... ...+-..-=+++|||+|+..
T Consensus 100 liDtPGh~dF~~ev~~al~---------~~D~allVVda~eGv~~qT~~----~~~-~a~~~~~p~i~viNKiDr~~ 162 (341)
T d1n0ua2 100 LIDSPGHVDFSSEVTAALR---------VTDGALVVVDTIEGVCVQTET----VLR-QALGERIKPVVVINKVDRAL 162 (341)
T ss_dssp EECCCCCCSSCHHHHHHHH---------TCSEEEEEEETTTBSCHHHHH----HHH-HHHHTTCEEEEEEECHHHHH
T ss_pred EEcCCCcHHHHHHHHHHHh---------hcCceEEEEecccCcchhHHH----HHH-HHHHcCCCeEEEEECccccc
Confidence 57788766543 3333332 257889999997643211100 000 11223344589999999643
No 72
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]}
Probab=25.77 E-value=45 Score=22.90 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=25.0
Q ss_pred eecCCCcEEeecc-------hhHHHHHHHHHHhcCCCCEEEEecCCCCCcH
Q 027979 15 VELANGCICCTVK-------HSLVQALEQLVQRKERLDHILLETTGLANPA 58 (216)
Q Consensus 15 ~eL~~GCiCCsl~-------~dl~~~L~~l~~~~~~~d~IiIE~sG~a~P~ 58 (216)
++..+|.|+-|.. .+....+.+.. .+.|.+|+|+|.+..|.
T Consensus 122 i~~~~~~i~ysGD~~~~g~~~~~~~~~~~~~---~~~DlLI~E~T~~~~p~ 169 (183)
T d2az4a1 122 IRTPDHFITYTGDLRLHGHNREETLAFCEKA---KHTELLMMEGVSISFPE 169 (183)
T ss_dssp EEETTEEEEECCSCCSSSTTHHHHHHHHHHH---TTCSEEEEECCGGGSCC
T ss_pred eeccCceEEEcCcccccCCCCchhhhHHhhC---CCCCEEEECCCCCCCCC
Confidence 3445566655544 23344444433 46899999999877664
No 73
>d1ixra2 b.40.4.2 (A:1-62) DNA helicase RuvA subunit, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=25.38 E-value=13 Score=21.67 Aligned_cols=13 Identities=15% Similarity=0.266 Sum_probs=11.7
Q ss_pred CCCEEEEecCCCC
Q 027979 43 RLDHILLETTGLA 55 (216)
Q Consensus 43 ~~d~IiIE~sG~a 55 (216)
.+++++||++|++
T Consensus 13 ~~~~ivi~~~GvG 25 (62)
T d1ixra2 13 EAGGFVLLAGGVG 25 (62)
T ss_dssp CSSEEEEECSSEE
T ss_pred cCCEEEEEECCEE
Confidence 6899999999986
No 74
>d1th5a1 d.52.8.1 (A:154-226) NifU-like protein 1, NIFUL1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=24.71 E-value=16 Score=22.22 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=22.1
Q ss_pred eeecCCCcEEeecchhHHHHHHHHHHhcCCCCEEEEe
Q 027979 14 WVELANGCICCTVKHSLVQALEQLVQRKERLDHILLE 50 (216)
Q Consensus 14 v~eL~~GCiCCsl~~dl~~~L~~l~~~~~~~d~IiIE 50 (216)
.+.|.|+|-.|. .+...+++.+...- |+...||
T Consensus 38 ~v~l~GaC~gC~---Tl~~gIe~~L~~~i-Pei~~V~ 70 (73)
T d1th5a1 38 KVRLTGPAAVVR---TVRIAVSKKLREKI-PSIQIVQ 70 (73)
T ss_dssp EECCCSSSSSSS---SHHHHHHHHHHHHC-TTCSEEE
T ss_pred EEEecCCCcccc---hHHHHHHHHHHHHC-CCccEEE
Confidence 578999999993 46566777665433 5554444
No 75
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=24.16 E-value=91 Score=22.67 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=39.0
Q ss_pred CCCEEEEecCCCCCcHH----HHHHhhcCcccccceeeccEEEEEccc--chHHHHhhcccCCChhHHHHHH-----hhc
Q 027979 43 RLDHILLETTGLANPAP----LASVLWLDDQLESAVRLDSIITVVDAK--NLLFQIDKYRHLSSYPEAIHQI-----AFA 111 (216)
Q Consensus 43 ~~d~IiIE~sG~a~P~~----i~~~l~~~~~l~~~~~l~~vI~vVDa~--~~~~~l~~~~~~~~~~~~~~QI-----~~A 111 (216)
....++|-|.|+.++.. +...+. .......++.++.|++.. ++...-... .. ...++ -.-
T Consensus 79 g~~i~viDTPGl~~~~~~~~~~~~~i~---~~~~~~~~~~il~v~~~~~~r~~~~~~~~-----l~-~l~~~fg~~~~~~ 149 (257)
T d1h65a_ 79 GFTLNIIDTPGLIEGGYINDMALNIIK---SFLLDKTIDVLLYVDRLDAYRVDNLDKLV-----AK-AITDSFGKGIWNK 149 (257)
T ss_dssp TEEEEEEECCCSEETTEECHHHHHHHH---HHTTTCEECEEEEEEESSCCCCCHHHHHH-----HH-HHHHHHCGGGGGG
T ss_pred cEEEEEEeeecccCCcchHHHHHHHHH---HHHhcCCCCeEEEEEECCCCCCCHHHHHH-----HH-HHHHHcchhhhhC
Confidence 45689999999987632 222111 112234567777776654 332211110 10 11111 111
Q ss_pred cEEEEccCCCCCCCC
Q 027979 112 DVVILNKVDLVSPER 126 (216)
Q Consensus 112 D~IvlnK~D~v~~~~ 126 (216)
=+||+||+|...++.
T Consensus 150 ~ivv~t~~D~~~~~~ 164 (257)
T d1h65a_ 150 AIVALTHAQFSPPDG 164 (257)
T ss_dssp EEEEEECCSCCCGGG
T ss_pred EEEEEECcccCCcCC
Confidence 278899999987543
No 76
>d1bvsa3 b.40.4.2 (A:1-63) DNA helicase RuvA subunit, N-terminal domain {Mycobacterium leprae [TaxId: 1769]}
Probab=23.20 E-value=12 Score=21.91 Aligned_cols=14 Identities=36% Similarity=0.743 Sum_probs=12.2
Q ss_pred CCCEEEEecCCCCC
Q 027979 43 RLDHILLETTGLAN 56 (216)
Q Consensus 43 ~~d~IiIE~sG~a~ 56 (216)
.+++|+||++|++-
T Consensus 13 ~~~~ivi~v~GvGY 26 (63)
T d1bvsa3 13 ALDHAVIEAAGIGY 26 (63)
T ss_dssp CSSCEEEEETTEEE
T ss_pred CCCEEEEEECCEEE
Confidence 68999999999874
No 77
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.12 E-value=94 Score=21.53 Aligned_cols=44 Identities=30% Similarity=0.421 Sum_probs=31.2
Q ss_pred hhccEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEEEeecCCCChhhhh
Q 027979 109 AFADVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVIRSVRCQVDLSEVL 161 (216)
Q Consensus 109 ~~AD~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv~~~~~~v~~~~l~ 161 (216)
..+|+|.|-|. +++ .+.++.+.++..+|+..+-. .|.|+++.+-
T Consensus 97 ~g~d~i~LDn~---~pe----~~k~~~~~lk~~~~~i~lEa--SGGI~~~ni~ 140 (170)
T d1o4ua1 97 AGADIVMLDNL---SPE----EVKDISRRIKDINPNVIVEV--SGGITEENVS 140 (170)
T ss_dssp TTCSEEEEESC---CHH----HHHHHHHHHHHHCTTSEEEE--EECCCTTTGG
T ss_pred cCccEEEEcCc---Chh----hHhHHHHHHHhhCCcEEEEE--ECCCCHHHHH
Confidence 34999998655 443 46778889999999876533 3568776664
No 78
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=23.01 E-value=24 Score=23.72 Aligned_cols=22 Identities=18% Similarity=0.280 Sum_probs=13.5
Q ss_pred EEEEccCCCCCCCCccchHHHHHHHH
Q 027979 113 VVILNKVDLVSPERSGDSLDELEKEI 138 (216)
Q Consensus 113 ~IvlnK~D~v~~~~~~~~l~~i~~~l 138 (216)
+|+.||+|+..... ..++.+.+
T Consensus 120 iiv~nK~Dl~~~~~----~~~i~~~~ 141 (177)
T d1zj6a1 120 LIFANKQDVKECMT----VAEISQFL 141 (177)
T ss_dssp EEEEECTTSTTCCC----HHHHHHHH
T ss_pred EEEEEcccccccCc----HHHHHHHH
Confidence 46669999866542 34455544
No 79
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=22.52 E-value=67 Score=21.27 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=29.5
Q ss_pred HHHhhccEEEEccCCCCCCCCcc--------chHHHHHHHHHhhCCCCEEEEee
Q 027979 106 HQIAFADVVILNKVDLVSPERSG--------DSLDELEKEIHEINSLAHVIRSV 151 (216)
Q Consensus 106 ~QI~~AD~IvlnK~D~v~~~~~~--------~~l~~i~~~l~~lNP~A~iv~~~ 151 (216)
+.++.||+|+++=.-.-.+.+.+ .-+..+.+.+.+.+|+|-++-.+
T Consensus 63 ~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence 45789999999832222222211 23556667888999999887644
No 80
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=22.16 E-value=37 Score=23.03 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=18.2
Q ss_pred EEEEccCCCCCCCCccchHHHHHHHHH--hhCC-CCEEEEee
Q 027979 113 VVILNKVDLVSPERSGDSLDELEKEIH--EINS-LAHVIRSV 151 (216)
Q Consensus 113 ~IvlnK~D~v~~~~~~~~l~~i~~~l~--~lNP-~A~iv~~~ 151 (216)
+|+.||+|+.+... .+++.+.+. .+.. ..++++++
T Consensus 122 liv~NK~Dl~~~~~----~~~i~~~~~~~~~~~~~~~~~e~S 159 (182)
T d1moza_ 122 LVFANKQDQPGALS----ASEVSKELNLVELKDRSWSIVASS 159 (182)
T ss_dssp EEEEECTTSTTCCC----HHHHHHHTTTTTCCSSCEEEEEEB
T ss_pred EEEEEeeccccccC----HHHHHHHHHHHHHhhCCCEEEEEE
Confidence 34459999976432 355555432 2222 34555543
No 81
>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}
Probab=21.31 E-value=21 Score=21.54 Aligned_cols=14 Identities=0% Similarity=0.045 Sum_probs=11.9
Q ss_pred CCCCHHHHHHhHcC
Q 027979 203 LAVNLDKVILQIAS 216 (216)
Q Consensus 203 ~p~~~~~~~~~l~~ 216 (216)
-||+++++.+||+.
T Consensus 60 w~fd~~~l~~~L~~ 73 (75)
T d1ttza_ 60 WPFDAPRLRAWLDA 73 (75)
T ss_dssp SCCCHHHHHHHHHT
T ss_pred CccCHHHHHHHHhc
Confidence 48999999999974
No 82
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.34 E-value=1.1e+02 Score=20.08 Aligned_cols=76 Identities=9% Similarity=0.104 Sum_probs=40.9
Q ss_pred eeccEEEEEcccchHHHHhhcccCCChhHHHHHHhh----c--c----EEEEccCCCCCCCCccchHHHHHHHHHhhCCC
Q 027979 75 RLDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIAF----A--D----VVILNKVDLVSPERSGDSLDELEKEIHEINSL 144 (216)
Q Consensus 75 ~l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~~----A--D----~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~ 144 (216)
..+.++.+.|.......- . .....+|+.. . + ++|.||+|+.+.. ...+++++..++.+ .
T Consensus 78 ~~~~~i~~~d~~~~~s~~-~------~~~~~~~i~~~~~~~~~~~~piilVgnK~Dl~~~~---v~~~~~~~~~~~~~-~ 146 (174)
T d1wmsa_ 78 GSDCCLLTFSVDDSQSFQ-N------LSNWKKEFIYYADVKEPESFPFVILGNKIDISERQ---VSTEEAQAWCRDNG-D 146 (174)
T ss_dssp TCSEEEEEEETTCHHHHH-T------HHHHHHHHHHHHTCSCTTTSCEEEEEECTTCSSCS---SCHHHHHHHHHHTT-C
T ss_pred ccceEEEEEeeecccccc-h------hhhHHHHHHHHhccccCCCceEEEeccccchhhcc---CcHHHHHHHHHHcC-C
Confidence 446678888887544321 1 1222333321 1 1 6777999986532 23566777776643 3
Q ss_pred CEEEEee-cCCCChhhhh
Q 027979 145 AHVIRSV-RCQVDLSEVL 161 (216)
Q Consensus 145 A~iv~~~-~~~v~~~~l~ 161 (216)
.++++++ ..+...+.++
T Consensus 147 ~~~~e~Sak~~~gI~e~f 164 (174)
T d1wmsa_ 147 YPYFETSAKDATNVAAAF 164 (174)
T ss_dssp CCEEECCTTTCTTHHHHH
T ss_pred CeEEEEcCCCCcCHHHHH
Confidence 5666654 2344455544
No 83
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=20.14 E-value=1e+02 Score=20.56 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=29.4
Q ss_pred HHhhccEEEEccCCCCCCCCc--------cchHHHHHHHHHhhCCCCEEEEeec
Q 027979 107 QIAFADVVILNKVDLVSPERS--------GDSLDELEKEIHEINSLAHVIRSVR 152 (216)
Q Consensus 107 QI~~AD~IvlnK~D~v~~~~~--------~~~l~~i~~~l~~lNP~A~iv~~~~ 152 (216)
=++.||+||++-.-.-.+.+. ..-++++-+.+.+.+|++.++-.++
T Consensus 66 ~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 66 ALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred ccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 368999999974322122111 1345666778889999998776544
No 84
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.08 E-value=56 Score=21.63 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=37.8
Q ss_pred eccEEEEEcccchHHHHhhcccCCChhHHHHHHh----hc---cEEEEccCCCCCCCCccchHHHHHHHHHhhCCCCEEE
Q 027979 76 LDSIITVVDAKNLLFQIDKYRHLSSYPEAIHQIA----FA---DVVILNKVDLVSPERSGDSLDELEKEIHEINSLAHVI 148 (216)
Q Consensus 76 l~~vI~vVDa~~~~~~l~~~~~~~~~~~~~~QI~----~A---D~IvlnK~D~v~~~~~~~~l~~i~~~l~~lNP~A~iv 148 (216)
.+.++.|.|..+-... .. ...+..++. .. =+++.||+|+..... ..+++++..+..+ ++.+
T Consensus 75 ~~~~iiv~d~~~~~s~-~~------~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~---~~~~~~~~~~~~~--~~~~ 142 (166)
T d1ctqa_ 75 GEGFLCVFAINNTKSF-ED------IHQYREQIKRVKDSDDVPMVLVGNKCDLAARTV---ESRQAQDLARSYG--IPYI 142 (166)
T ss_dssp CSEEEEEEETTCHHHH-HT------HHHHHHHHHHHHTCSSCCEEEEEECTTCSCCCS---CHHHHHHHHHHHT--CCEE
T ss_pred ccccceeecccccccH-HH------HHHHHHHHHHhcCCCCCeEEEEecccccccccc---cHHHHHHHHHHhC--CeEE
Confidence 3567888888765432 11 122222222 22 235669999865432 3455555555544 5676
Q ss_pred Eeec-CCCChhhhh
Q 027979 149 RSVR-CQVDLSEVL 161 (216)
Q Consensus 149 ~~~~-~~v~~~~l~ 161 (216)
+++. -+...++++
T Consensus 143 e~Sak~g~gi~e~f 156 (166)
T d1ctqa_ 143 ETSAKTRQGVEDAF 156 (166)
T ss_dssp ECCTTTCTTHHHHH
T ss_pred EEcCCCCcCHHHHH
Confidence 6543 233344443
Done!