Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>027980
MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGA
KAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG
RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQSEESEAHDAPVEEKFQDYEDSYA
NEAPSFWNSEASEDSKASDSSLYENSESETYENSEL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027980
        (216 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102688 - symbol:AT1G56423 "AT1G56423" spec...   547  8.0e-53   1


>TAIR|locus:4515102688 [details] [associations]
            symbol:AT1G56423 "AT1G56423" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            GO:GO:0005783 EMBL:CP002684 IPI:IPI00817987 RefSeq:NP_001117508.1
            UniGene:At.68611 PRIDE:F4I543 EnsemblPlants:AT1G56423.1
            GeneID:6240792 KEGG:ath:AT1G56423 OMA:ASKSGQF Uniprot:F4I543
        Length = 270

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 102/189 (53%), Positives = 133/189 (70%)

Query:     1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDXXXXXXXXXX 60
             M SGT+AC VKEGVKLYFYNIR+ HVE+ARNVAIEKA+ +AL  G+ + +          
Sbjct:    50 MSSGTLACAVKEGVKLYFYNIRSIHVEKARNVAIEKALHEALDNGMLAKEAAKEGQRAGE 109

Query:    61 XXXXXXXXXXXXIIGPIIAAGWDFFEAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLG 120
                         IIGPI+AAGWDFFEA+Y+GGT+TEGF+RGTGT+ GAY+GG++GE+R G
Sbjct:   110 KAAKLATRQAKRIIGPIVAAGWDFFEALYFGGTLTEGFLRGTGTMVGAYSGGYVGEQRFG 169

Query:   121 RFGYLVGSHLGSWAGGRIGLMIYDVVNGVHFLLQFVQS----EESEAHDAPVEEK-FQDY 175
             RFGYLVGS LG+W G R+GLM+YDVVNGV+F  +  QS    E+   +++P +   ++  
Sbjct:   170 RFGYLVGSTLGNWVGARVGLMVYDVVNGVNFFYETYQSGEIYEDQSTNESPEDRSTYESR 229

Query:   176 EDSYANEAP 184
             ED    E+P
Sbjct:   230 EDPSTYESP 238


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.140   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       166   0.00097  107 3  11 22  0.39    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.02u 0.16s 14.18t   Elapsed:  00:00:00
  Total cpu time:  14.02u 0.16s 14.18t   Elapsed:  00:00:00
  Start:  Tue May 21 03:18:21 2013   End:  Tue May 21 03:18:21 2013

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