Query 027980
Match_columns 216
No_of_seqs 20 out of 22
Neff 2.0
Searched_HMMs 29240
Date Mon Mar 25 06:33:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027980.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027980hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aq4_A SN-glycerol-3-phosphate 84.5 2 6.9E-05 34.0 5.9 38 32-69 379-416 (419)
2 2uvj_A TOGB, ABC type periplas 74.9 3.7 0.00013 33.1 4.6 34 31-64 371-404 (408)
3 1ekq_A Hydroxyethylthiazole ki 74.0 7.4 0.00025 31.6 6.3 56 32-89 198-253 (272)
4 2b3f_A Glucose-binding protein 73.1 1.8 6.2E-05 35.0 2.4 40 31-71 357-396 (400)
5 4b3n_A Maltose-binding peripla 72.2 1.4 5E-05 39.1 1.8 35 31-65 354-388 (602)
6 4exk_A Maltose-binding peripla 68.1 5.5 0.00019 34.6 4.5 31 31-61 344-374 (487)
7 2ddm_A Pyridoxine kinase; pyri 68.1 8.7 0.0003 30.2 5.3 37 32-68 233-269 (283)
8 3mq9_A Bone marrow stromal ant 67.1 13 0.00043 31.8 6.4 40 31-70 354-393 (471)
9 3n94_A Fusion protein of malto 60.7 14 0.00048 30.9 5.5 38 31-68 342-379 (475)
10 2gh9_A Maltose/maltodextrin-bi 59.8 12 0.0004 30.0 4.6 32 32-63 346-378 (386)
11 2zyo_A Solute-binding protein; 59.2 15 0.00052 29.4 5.2 32 32-63 361-392 (397)
12 2yxt_A Pyridoxal kinase; beta 59.1 22 0.00074 28.4 6.1 43 32-74 235-278 (312)
13 4h1g_A Maltose binding protein 58.9 5.6 0.00019 36.7 3.0 34 31-64 341-374 (715)
14 3dzv_A 4-methyl-5-(beta-hydrox 58.1 19 0.00066 30.3 5.9 66 21-90 188-257 (273)
15 2z8f_A Galacto-N-biose/lacto-N 57.6 14 0.00047 30.0 4.7 33 32-64 372-404 (412)
16 3h3g_A Fusion protein of malto 57.5 5.1 0.00017 34.8 2.3 45 31-75 342-386 (539)
17 4hw8_A Bacterial extracellular 57.4 12 0.0004 30.4 4.3 37 31-68 376-412 (420)
18 2gha_A Maltose ABC transporter 56.0 14 0.00047 29.6 4.4 32 32-63 342-373 (382)
19 2r3b_A YJEF-related protein; p 55.0 15 0.00051 31.1 4.7 51 33-89 236-286 (310)
20 2w7y_A FCSSBP, probable sugar 54.2 12 0.00039 30.5 3.8 29 32-60 398-426 (430)
21 1eu8_A Trehalose/maltose bindi 52.7 19 0.00066 28.9 4.8 31 32-62 374-404 (409)
22 2xd3_A MALX, maltose/maltodext 52.1 20 0.00068 29.1 4.8 31 32-62 379-409 (416)
23 2xz3_A Maltose ABC transporter 51.6 19 0.00067 30.6 4.9 37 32-68 342-378 (463)
24 3oai_A Maltose-binding peripla 51.4 13 0.00044 30.7 3.7 35 31-65 340-374 (507)
25 3bgk_A SMU.573, putative uncha 51.0 24 0.00084 29.8 5.4 51 33-89 252-303 (311)
26 4g68_A ABC transporter; transp 48.9 18 0.00063 29.9 4.2 29 31-59 425-453 (456)
27 3i3v_A Probable secreted solut 48.3 17 0.00057 29.1 3.8 31 31-61 366-396 (405)
28 2dpo_A L-gulonate 3-dehydrogen 47.2 4 0.00014 34.5 -0.0 43 2-45 18-60 (319)
29 4hs7_A Bacterial extracellular 46.4 33 0.0011 27.7 5.3 32 32-64 377-408 (420)
30 1wdk_A Fatty oxidation complex 46.1 8.6 0.0003 36.0 2.0 45 1-46 325-369 (715)
31 3k01_A Acarbose/maltose bindin 45.0 30 0.001 27.8 4.8 31 32-62 377-407 (412)
32 4gqo_A LMO0859 protein; virule 44.8 31 0.0011 27.7 4.9 33 30-62 398-430 (433)
33 2vgq_A Maltose-binding peripla 44.7 74 0.0025 26.8 7.4 50 32-83 356-405 (477)
34 3quf_A Extracellular solute-bi 43.5 18 0.0006 29.1 3.2 31 31-61 380-410 (414)
35 3dm0_A Maltose-binding peripla 43.1 29 0.00098 29.9 4.7 30 32-61 341-370 (694)
36 1r6z_P Chimera of maltose-bind 42.9 8.1 0.00028 33.0 1.2 54 32-89 342-395 (509)
37 3h74_A Pyridoxal kinase; PSI-I 42.9 48 0.0016 26.9 5.8 55 32-90 215-269 (282)
38 4gfq_A Ribosome-recycling fact 42.5 45 0.0015 28.0 5.7 40 31-72 99-157 (209)
39 1elj_A Maltodextrin-binding pr 42.4 36 0.0012 27.1 4.9 30 32-61 346-377 (381)
40 3oo8_A ABC transporter binding 42.4 22 0.00076 28.5 3.7 30 32-61 381-412 (415)
41 3iot_A Maltose-binding protein 42.0 57 0.0019 27.1 6.2 35 31-65 340-374 (449)
42 1ub0_A THID, phosphomethylpyri 41.7 15 0.00053 28.2 2.6 37 31-67 209-245 (258)
43 2ap1_A Putative regulator prot 41.3 29 0.00098 27.9 4.2 63 33-96 217-281 (327)
44 3vov_A Glucokinase, hexokinase 39.7 24 0.00083 28.5 3.5 64 31-95 183-248 (302)
45 1v8a_A Hydroxyethylthiazole ki 39.7 48 0.0016 27.0 5.3 52 33-89 196-247 (265)
46 3uor_A ABC transporter sugar b 39.2 37 0.0013 28.2 4.6 34 31-64 381-414 (458)
47 1hsj_A Fusion protein consisti 38.6 1E+02 0.0035 25.8 7.2 60 32-91 341-416 (487)
48 1urs_A Maltose-binding protein 36.9 22 0.00076 28.6 2.9 31 32-63 367-397 (402)
49 2wtb_A MFP2, fatty acid multif 36.5 8.4 0.00029 36.2 0.4 44 1-45 323-366 (725)
50 3r8e_A Hypothetical sugar kina 36.4 41 0.0014 27.3 4.4 51 45-96 220-272 (321)
51 1y60_A Formaldehyde-activating 36.0 40 0.0014 28.0 4.3 41 30-70 86-144 (169)
52 3csg_A MBP, maltose-binding pr 36.0 37 0.0013 28.3 4.1 28 32-59 339-366 (461)
53 4db3_A Glcnac kinase, N-acetyl 35.4 45 0.0015 27.3 4.5 64 32-96 216-281 (327)
54 2i5b_A Phosphomethylpyrimidine 35.3 23 0.00077 27.5 2.6 35 32-66 216-250 (271)
55 1d8w_A L-rhamnose isomerase; b 35.0 34 0.0012 32.0 4.1 56 23-85 343-398 (426)
56 3cay_A LPD-12; alpha helix, ac 34.9 33 0.0011 21.1 2.8 15 50-64 9-23 (27)
57 3pzs_A PM kinase, pyridoxamine 34.3 86 0.0029 25.1 6.0 37 32-68 226-262 (289)
58 3p14_A L-rhamnose isomerase; T 34.2 46 0.0016 30.8 4.8 49 32-85 348-396 (424)
59 1ge9_A Ribosome recycling fact 33.9 68 0.0023 26.2 5.3 39 31-72 78-135 (184)
60 3osq_A Maltose-binding peripla 32.9 37 0.0013 31.3 4.0 34 31-64 622-655 (661)
61 3py7_A Maltose-binding peripla 32.8 44 0.0015 28.7 4.3 32 31-62 341-372 (523)
62 3o3u_N Maltose-binding peripla 31.8 38 0.0013 28.3 3.5 30 31-60 340-369 (581)
63 1mh3_A Maltose binding-A1 home 31.8 36 0.0012 27.5 3.3 31 32-62 341-371 (421)
64 1f0y_A HCDH, L-3-hydroxyacyl-C 31.6 16 0.00056 29.2 1.3 39 7-46 32-70 (302)
65 2nvu_B Maltose binding protein 31.1 15 0.00052 34.0 1.1 31 32-62 345-375 (805)
66 4e12_A Diketoreductase; oxidor 30.9 27 0.00091 27.9 2.4 43 2-45 16-58 (283)
67 2apl_A Hypothetical protein PG 30.2 65 0.0022 26.5 4.6 30 29-58 36-65 (157)
68 3mp6_A MBP, SGF29, maltose-bin 30.1 54 0.0018 28.3 4.3 28 31-58 341-368 (522)
69 3ie7_A LIN2199 protein; phosph 28.2 92 0.0032 24.6 5.1 32 32-63 253-284 (320)
70 2gup_A ROK family protein; sug 28.1 64 0.0022 25.3 4.2 49 46-95 188-238 (292)
71 3ob4_A Conglutin, maltose ABC 28.0 51 0.0017 28.3 3.8 32 31-62 340-371 (500)
72 2qcv_A Putative 5-dehydro-2-de 27.5 1E+02 0.0035 24.3 5.3 32 32-63 273-304 (332)
73 2zxt_A Maltose-binding peripla 27.4 62 0.0021 27.5 4.2 28 32-59 341-368 (465)
74 3h49_A Ribokinase; transferase 27.0 98 0.0034 24.6 5.1 31 32-62 262-292 (325)
75 3oyv_A Imelysin; outer membran 27.0 1.4E+02 0.0048 26.2 6.5 65 17-84 233-300 (361)
76 1jxh_A Phosphomethylpyrimidine 26.9 77 0.0026 25.1 4.4 33 32-64 235-267 (288)
77 3umo_A 6-phosphofructokinase i 26.9 96 0.0033 24.3 4.9 31 32-62 256-286 (309)
78 2abq_A Fructose 1-phosphate ki 26.8 1.1E+02 0.0038 24.0 5.3 32 32-63 249-280 (306)
79 3h4z_A Maltose-binding peripla 26.7 1.2E+02 0.0043 26.8 6.2 29 31-59 340-368 (568)
80 1apy_B Aspartylglucosaminidase 26.7 60 0.0021 25.7 3.7 19 38-56 67-85 (141)
81 3pl2_A Sugar kinase, ribokinas 26.6 1E+02 0.0035 24.2 5.1 31 32-62 265-295 (319)
82 3mog_A Probable 3-hydroxybutyr 26.6 20 0.00067 32.1 1.0 45 1-46 16-60 (483)
83 2v78_A Fructokinase; transfera 26.4 1E+02 0.0036 24.2 5.1 32 32-63 258-289 (313)
84 4htl_A Beta-glucoside kinase; 26.3 71 0.0024 25.6 4.2 50 46-96 198-249 (297)
85 1v1a_A 2-keto-3-deoxygluconate 25.8 1.1E+02 0.0037 24.0 5.1 32 32-63 251-282 (309)
86 2c0n_A A197; thermophil protei 25.7 20 0.00068 30.4 0.8 39 1-40 10-51 (203)
87 3cqd_A 6-phosphofructokinase i 25.6 1E+02 0.0036 24.1 4.9 32 32-63 256-287 (309)
88 4du5_A PFKB; structural genomi 25.5 1.1E+02 0.0036 24.7 5.1 32 32-63 285-316 (336)
89 2c4e_A Sugar kinase MJ0406; tr 25.0 1.1E+02 0.0037 24.0 4.9 31 32-62 247-277 (302)
90 2jg5_A Fructose 1-phosphate ki 24.9 1.2E+02 0.004 23.6 5.1 32 32-63 249-280 (306)
91 3kzh_A Probable sugar kinase; 24.9 1.1E+02 0.0039 24.3 5.1 32 32-63 257-288 (328)
92 3mbh_A Putative phosphomethylp 24.8 1.1E+02 0.0038 24.8 5.1 53 32-89 225-277 (291)
93 2qhp_A Fructokinase; NP_810670 24.8 1.1E+02 0.0036 23.8 4.8 31 32-62 247-277 (296)
94 3osr_A Maltose-binding peripla 24.7 63 0.0022 29.8 4.0 28 32-59 624-651 (653)
95 2jg1_A Tagatose-6-phosphate ki 24.6 1.1E+02 0.0039 24.5 5.1 32 32-63 274-305 (330)
96 1rkd_A Ribokinase; carbohydrat 24.6 1.2E+02 0.0041 23.7 5.1 32 32-63 255-286 (309)
97 4e69_A 2-dehydro-3-deoxyglucon 24.4 1.2E+02 0.0039 24.5 5.1 31 32-62 279-309 (328)
98 3fxd_A Protein ICMQ; helix bun 24.4 39 0.0013 23.9 2.0 15 31-45 10-24 (57)
99 3bf5_A Ribokinase related prot 24.4 1.2E+02 0.0043 24.1 5.3 33 32-64 246-278 (306)
100 3iq0_A Putative ribokinase II; 24.1 1.1E+02 0.0038 24.4 4.9 31 32-62 260-290 (330)
101 3f5f_A Maltose-binding peripla 24.1 43 0.0015 29.9 2.7 32 31-62 340-371 (658)
102 2qm1_A Glucokinase; alpha-beta 24.0 70 0.0024 25.3 3.7 50 46-96 223-274 (326)
103 3k6j_A Protein F01G10.3, confi 23.9 34 0.0012 31.0 2.0 42 1-46 65-106 (460)
104 2f02_A Tagatose-6-phosphate ki 23.8 1.3E+02 0.0045 23.9 5.3 32 32-63 257-288 (323)
105 2heu_A Sugar ABC transporter, 23.8 67 0.0023 25.8 3.6 27 32-59 370-396 (401)
106 3ktn_A Carbohydrate kinase, PF 23.8 1.1E+02 0.0039 24.3 4.9 31 32-62 280-310 (346)
107 3anp_C Transcriptional repress 23.6 1.4E+02 0.005 20.9 5.0 37 20-56 1-40 (204)
108 3lhx_A Ketodeoxygluconokinase; 23.5 1.1E+02 0.0038 24.2 4.8 31 32-62 266-296 (319)
109 4e84_A D-beta-D-heptose 7-phos 23.4 1.2E+02 0.0041 25.0 5.1 31 32-62 306-336 (352)
110 2hlz_A Ketohexokinase; non-pro 23.4 1.3E+02 0.0043 23.9 5.1 32 32-63 272-303 (312)
111 1vm7_A Ribokinase; TM0960, str 23.3 1.2E+02 0.0041 24.1 4.9 31 32-62 258-288 (311)
112 1vk4_A PFKB carbohydrate kinas 23.3 1.2E+02 0.0042 23.8 5.0 31 32-62 246-277 (298)
113 1z05_A Transcriptional regulat 23.2 92 0.0031 26.3 4.5 49 47-96 319-369 (429)
114 2jif_A Short/branched chain sp 23.2 3.1E+02 0.011 22.8 7.7 51 25-77 314-364 (404)
115 4gm6_A PFKB family carbohydrat 22.8 1.2E+02 0.0042 24.2 4.9 30 32-61 293-322 (351)
116 3b1n_A Ribokinase, putative; r 22.5 1.3E+02 0.0045 24.1 5.1 32 32-63 253-284 (326)
117 2dcn_A Hypothetical fructokina 22.5 1.2E+02 0.0042 23.7 4.8 31 32-62 256-286 (311)
118 3nf4_A Acyl-COA dehydrogenase; 22.3 3.2E+02 0.011 22.3 7.7 38 40-77 312-349 (387)
119 2abs_A Adenosine kinase, AK; r 22.3 1.3E+02 0.0045 24.7 5.1 32 32-63 338-369 (383)
120 3vas_A Putative adenosine kina 22.3 1.2E+02 0.0042 25.0 4.9 31 32-62 320-350 (370)
121 2qko_A Possible transcriptiona 22.0 74 0.0025 22.7 3.2 35 21-55 21-58 (215)
122 2rbc_A Sugar kinase, AGR_C_456 22.0 1.3E+02 0.0046 24.4 5.1 32 32-63 276-307 (343)
123 1bx4_A Protein (adenosine kina 21.9 1.2E+02 0.0042 24.1 4.8 31 32-62 300-330 (345)
124 2nwh_A AGR_C_3442P, carbohydra 21.7 1.4E+02 0.0049 23.6 5.1 32 32-63 255-286 (317)
125 3gt0_A Pyrroline-5-carboxylate 21.7 2E+02 0.0068 22.1 5.8 35 34-68 182-217 (247)
126 3otx_A Adenosine kinase, putat 21.5 1.4E+02 0.0046 24.0 4.9 31 32-62 301-331 (347)
127 3loo_A Anopheles gambiae adeno 21.3 1.5E+02 0.0052 24.2 5.3 32 32-63 317-348 (365)
128 3vgl_A Glucokinase; ROK family 21.2 85 0.0029 25.4 3.7 50 46-96 213-264 (321)
129 2pkf_A Adenosine kinase; trans 21.2 1.5E+02 0.005 23.9 5.1 32 32-63 267-298 (334)
130 3ewm_A Uncharacterized sugar k 21.0 1.4E+02 0.0049 23.5 4.9 31 32-62 247-279 (313)
131 1sz2_A Glucokinase, glucose ki 20.8 1.4E+02 0.0049 24.1 5.0 50 46-96 224-277 (332)
132 3kwp_A Predicted methyltransfe 20.2 22 0.00074 30.0 0.0 27 34-60 254-280 (296)
No 1
>4aq4_A SN-glycerol-3-phosphate-binding periplasmic prote; diester-binding protein; HET: G3P; 1.80A {Escherichia coli}
Probab=84.52 E-value=2 Score=34.02 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQ 69 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQ 69 (216)
.++..+|+..+...+++++|.+++|++..+.-|...+.
T Consensus 379 ~~~~~~~~~~~~g~~t~e~al~~~~~~~~~~L~~y~k~ 416 (419)
T 4aq4_A 379 VIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKS 416 (419)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999999988877665443
No 2
>2uvj_A TOGB, ABC type periplasmic sugar-binding protein; periplasmic binding protein, pectin degradation, trigalacturonic acid; HET: ADA; 1.8A {Yersinia enterocolitica} PDB: 2uvi_A* 2uvh_A* 2uvg_A 3u1o_A
Probab=74.85 E-value=3.7 Score=33.10 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
+.++..+|++++...+++++|++++|++..+.-+
T Consensus 371 ~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~ 404 (408)
T 2uvj_A 371 VSLFGDAIQYIDYGQKTVQETAEYFNKQGDRILK 404 (408)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578888999999999999999999998776544
No 3
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=74.03 E-value=7.4 Score=31.57 Aligned_cols=56 Identities=20% Similarity=0.059 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
.++-.++.-.+.+|+++.||++.|......|+..|..+ ++-.|| =+.--|+++.||
T Consensus 198 D~lag~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~~-~~~~g~-g~~~~~~id~l~ 253 (272)
T 1ekq_A 198 CLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQ-TADKGP-GSFQIELLNKLS 253 (272)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHH-HTTSCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhc-cCCCCC-ChHHHHHHHHHH
Confidence 56777788888999999999999999888888888764 112366 345678888887
No 4
>2b3f_A Glucose-binding protein; protein-carbohydrate complex, periplasmic binding protein, galactose, GBP, sugar binding protein; HET: GAL; 1.56A {Thermus thermophilus HB27} PDB: 2b3b_A*
Probab=73.07 E-value=1.8 Score=35.03 Aligned_cols=40 Identities=15% Similarity=-0.018 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhh
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAK 71 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAk 71 (216)
+.++..+|++.+... +++||++++|+...++-+...||-.
T Consensus 357 ~~~~~~~~~~~~~g~-~~~~al~~~~~~~~~~~~~~~~~~~ 396 (400)
T 2b3f_A 357 MSQFGTVMEIFLQTR-NPQAAANAAQAIADQVGLGRLGQHH 396 (400)
T ss_dssp HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTTCC----
T ss_pred HHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHhhhccccccc
Confidence 357788888888888 9999999999988887777777643
No 5
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=72.18 E-value=1.4 Score=39.15 Aligned_cols=35 Identities=26% Similarity=0.205 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 65 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 65 (216)
..++..+|++++...+|++||+++||++-++..+.
T Consensus 354 ~~~l~~~l~~vl~G~~tpeeAl~~aq~~I~~~i~~ 388 (602)
T 4b3n_A 354 WYAVRTAVINAASGRQTVDEALKDAQTRITRRVFR 388 (602)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999999999987765443
No 6
>4exk_A Maltose-binding periplasmic protein, uncharacteri protein chimera; MCSG, pcsep, MBP-fused target, structural genomics; HET: MTT; 1.28A {Escherichia coli} PDB: 3g7v_A* 3g7w_A* 3sev_A* 3ser_A* 3sew_A* 3set_A* 3ses_A* 3seu_A* 3sex_A* 3sey_A* 3q27_A* 3q28_A* 3q26_A* 3q25_A* 3q29_A* 1nmu_A* 2ok2_A* 3pgf_A* 1t0k_A* 3rum_A* ...
Probab=68.15 E-value=5.5 Score=34.65 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 61 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 61 (216)
..++..+|++++...+||+||.++||++...
T Consensus 344 ~~~l~~al~~vl~G~~tpeeAL~~aq~~a~A 374 (487)
T 4exk_A 344 WYAVRTAVINAASGRQTVDAALAAAQTNAAA 374 (487)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 3578889999999999999999999998754
No 7
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=68.08 E-value=8.7 Score=30.20 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
.+.-.++.-++.+|+++.+|++.|...+..+.+.+..
T Consensus 233 Daf~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 233 DLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5677889999999999999999999988888777665
No 8
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=67.08 E-value=13 Score=31.78 Aligned_cols=40 Identities=25% Similarity=0.175 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHh
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQA 70 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQA 70 (216)
..++..++.+++...+++++|.+.+++...++-+....++
T Consensus 354 ~~~~~~~~~~vl~G~~t~eeal~~~~~~i~~~l~~~~~~~ 393 (471)
T 3mq9_A 354 WYAVRTAVINAASGRQTVDEALKDAQTRITAARDGLRAVM 393 (471)
T ss_dssp HHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3478899999999999999999999999988877766554
No 9
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=60.74 E-value=14 Score=30.95 Aligned_cols=38 Identities=29% Similarity=0.310 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
+.++..++.+++...+++++|.+++++...++-++-.+
T Consensus 342 ~~~~~~~~~~~~~G~~t~eeal~~~~~~~~~~l~~l~~ 379 (475)
T 3n94_A 342 WYAVRTAVINAASGRQTVDEALKDAQTNAAAEFAIFKK 379 (475)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35788899999999999999999999998887766554
No 10
>2gh9_A Maltose/maltodextrin-binding protein; MBP, maltose binding protein, thermoph protein, periplasmic binding protein, sugar binding protein; HET: MLR; 1.95A {Thermus thermophilus}
Probab=59.82 E-value=12 Score=30.01 Aligned_cols=32 Identities=16% Similarity=0.008 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGL-SSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGl-s~~eaAk~Aqk~g~kAA 63 (216)
.++..+|++++...+ ++++|++++|++..+..
T Consensus 346 ~~~~~~~~~~~~g~~~t~~~al~~~~~~~~~~~ 378 (386)
T 2gh9_A 346 GPWGNAISLAIQRPDSNVKKIVEDMVAEIKKAI 378 (386)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHh
Confidence 467888888888889 99999999988765543
No 11
>2zyo_A Solute-binding protein; open form, sugar binding protein; HET: GLC; 1.55A {Thermoactinomyces vulgaris} PDB: 2zyk_A* 2zym_A* 2zyn_A* 2dfz_A*
Probab=59.22 E-value=15 Score=29.39 Aligned_cols=32 Identities=16% Similarity=-0.003 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.++..+|.+++...+++++|++++|+...+..
T Consensus 361 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l 392 (397)
T 2zyo_A 361 EPINNAHTFVAQGKQTPEQALNDAVKIMKEKI 392 (397)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 56788888888888999999999998876554
No 12
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=59.11 E-value=22 Score=28.43 Aligned_cols=43 Identities=7% Similarity=-0.107 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 027980 32 VAIEKAVVDALSQ-GLSSNDAAKQAQKEGAKAAKLAKRQAKRII 74 (216)
Q Consensus 32 ~A~e~AL~da~~q-Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~ 74 (216)
.+.-.++.-++.+ |+++.+|++.|...+..+.+.+....+.+.
T Consensus 235 Daf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~~~~~ 278 (312)
T 2yxt_A 235 DLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQA 278 (312)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 5677888899998 999999999999999888887776554444
No 13
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=58.91 E-value=5.6 Score=36.70 Aligned_cols=34 Identities=26% Similarity=0.209 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
..++..+|.+++...++|+||.++||++.+++.+
T Consensus 341 ~~~l~~al~~vl~G~~tpeeAL~~Aq~~~~~il~ 374 (715)
T 4h1g_A 341 WYAVRTAVINAASGRQTVDAALAAAQTNAAALKG 374 (715)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHh
Confidence 3578889999999999999999999998777643
No 14
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=58.07 E-value=19 Score=30.29 Aligned_cols=66 Identities=15% Similarity=0.061 Sum_probs=48.4
Q ss_pred chhHHHHHHH----HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhhh
Q 027980 21 IRAAHVERAR----NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYY 90 (216)
Q Consensus 21 IRs~hvE~~R----~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalYy 90 (216)
+++.|..+.| =-.+-.++...+.+|.++.+|+..|...-..|+.+|.++++ || =|--.+|+.+||-
T Consensus 188 ~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~~~Age~A~~~~~---g~-Gsf~~~llD~L~~ 257 (273)
T 3dzv_A 188 LQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAKTKSQ---GL-ADFRQNTLNQLSL 257 (273)
T ss_dssp ECCCCGGGGSSTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCS---SH-HHHHHHHHHHHHH
T ss_pred eCCCCcccCCcCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhCC---CC-ccHHHHHHHHHHc
Confidence 4555554444 13455677777889999999999999999999999887754 55 3445688888874
No 15
>2z8f_A Galacto-N-biose/lacto-N-biose I transporter subst binding protein; ABC transporter, mucin core-1, human MILK oligosacchalide; HET: BGC GAL NAG MES; 1.65A {Bifidobacterium longum} PDB: 2z8e_A* 2z8d_A*
Probab=57.60 E-value=14 Score=30.00 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
.++..+|.+++...+++++|++++|++..+..+
T Consensus 372 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l~ 404 (412)
T 2z8f_A 372 AKMNETAAKATDGSGKVADIFSDAQTTSVDTLK 404 (412)
T ss_dssp HHHHHHHHHGGGTSSCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 567788888888889999999999988765543
No 16
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=57.50 E-value=5.1 Score=34.77 Aligned_cols=45 Identities=24% Similarity=0.217 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIG 75 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~G 75 (216)
..++..++.+++...+++++|.+++++...++.+....+.++++-
T Consensus 342 ~~~~~~~~~~~~~G~~s~eeAl~~~~~~i~~~l~~~~~~~~~~~~ 386 (539)
T 3h3g_A 342 WYAVRTAVINAASGRQTVDEALKDAQTNAAAEFDDVMTKEEQIFL 386 (539)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHTC----CCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 357888999999999999999999999988776665555555543
No 17
>4hw8_A Bacterial extracellular solute-binding protein, P; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MAL; 2.25A {Staphylococcus aureus subsp} PDB: 4hs7_A*
Probab=57.36 E-value=12 Score=30.38 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
..++..+|++.+... ++++|.++++++..++.+...+
T Consensus 376 ~~~~~~~~~~~~~G~-~~~~al~~~~~~~~~~l~~~~~ 412 (420)
T 4hw8_A 376 WEPMGNASIFISNGK-NPKQALDEATNDITQNIKILHP 412 (420)
T ss_dssp HHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHhCC
Confidence 356788888888877 9999999999998887766544
No 18
>2gha_A Maltose ABC transporter, periplasmic maltose-BIND protein; periplasmic binding protein, MBP, maltotriose; HET: MLR; 1.60A {Thermotoga maritima} PDB: 2ghb_A 2fnc_A*
Probab=55.96 E-value=14 Score=29.57 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.++..++++++...+++++|++++|+...++.
T Consensus 342 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l 373 (382)
T 2gha_A 342 AAMNDALNLVVNGKATVEEALKNAVERIKAQI 373 (382)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 46778888888888999999999988765543
No 19
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=55.03 E-value=15 Score=31.08 Aligned_cols=51 Identities=8% Similarity=-0.059 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 33 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 33 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
.+-.++.-.+.+|+++.||++.|.-....|+.+|.++ ||- ..--|+++.|+
T Consensus 236 ~Lag~Iaa~lA~g~~~~eA~~~A~~~~~~ag~~a~~~-----g~~-~~a~dl~~~l~ 286 (310)
T 2r3b_A 236 TLAGIIAGFLAQFKPTIETIAGAVYLHSLIGDDLAKT-----DYV-VLPTKISQALP 286 (310)
T ss_dssp HHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTT-----CSS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh-----CCC-CCHHHHHHHHH
Confidence 3666777777899999999999988877777776654 643 34458887775
No 20
>2w7y_A FCSSBP, probable sugar ABC transporter, sugar-binding protein; solute-binding protein, blood group antigen, carbohydrate transport; HET: A2G GAL FUC; 2.35A {Streptococcus pneumoniae}
Probab=54.18 E-value=12 Score=30.53 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGA 60 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~ 60 (216)
.++..+|.+++..++++++|++++|++..
T Consensus 398 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~ 426 (430)
T 2w7y_A 398 TAIINALTESAAENVDVDQKVKSTQDVLK 426 (430)
T ss_dssp HHHHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 46677777777888999999999887543
No 21
>1eu8_A Trehalose/maltose binding protein; protein-carbohydrate complex, MBP 2 fold, ABC transporter fold, thermophilic protein; HET: TRE; 1.90A {Thermococcus litoralis} SCOP: c.94.1.1
Probab=52.68 E-value=19 Score=28.88 Aligned_cols=31 Identities=35% Similarity=0.383 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.++..++.+++...+++++|.+++|++..++
T Consensus 374 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~ 404 (409)
T 1eu8_A 374 EIIQKYVNSALAGKISPQEALDKAQKEAEEL 404 (409)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 5677888888888899999999999876543
No 22
>2xd3_A MALX, maltose/maltodextrin-binding protein; solute-binding protein, sugar binding protein, virulence, alpha-glucan, sugar transport; HET: GLC; 2.00A {Streptococcus pneumoniae} PDB: 2xd2_A*
Probab=52.11 E-value=20 Score=29.09 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.++..++++++...++++||++++|+...+.
T Consensus 379 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 409 (416)
T 2xd3_A 379 DPAKNMLFDAVSGQKDAKTAANDAVTLIKET 409 (416)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4678888898888899999999999876654
No 23
>2xz3_A Maltose ABC transporter periplasmic protein, ENVE glycoprotein; viral protein, viral membrane fusion, hairpin, chimera; HET: MAL; 1.95A {Escherichia coli} PDB: 1mg1_A*
Probab=51.64 E-value=19 Score=30.55 Aligned_cols=37 Identities=24% Similarity=0.213 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
.++..++.+++...+++++|.+++|+...+..+...+
T Consensus 342 ~~~~~~l~~~~~G~~t~eeal~~~~~~~~~~l~~~~~ 378 (463)
T 2xz3_A 342 YAVRTAVINAASGRQTVDAALAAAQTNAAALSHQRLT 378 (463)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhHH
Confidence 4677888888888899999999999987665554333
No 24
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=51.39 E-value=13 Score=30.66 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 65 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 65 (216)
+.++..++.+++...+++++|.+++++.-.++.+.
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l~~ 374 (507)
T 3oai_A 340 WYAVRTAVINAASGRQTVDEALKDAQTNNNNNNNN 374 (507)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhc
Confidence 35788999999999999999999999988777654
No 25
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=51.00 E-value=24 Score=29.76 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 33 AIEKAVVDALSQ-GLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 33 A~e~AL~da~~q-Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
.+-.++.-.+.+ |+++.||++.|.-....|+.+|.++ ||- ..--|+++.|+
T Consensus 252 ~Lag~iaa~lA~~g~~~~eA~~~A~~~~~~ag~~a~~~-----g~~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 252 TLAGMIAGFVAQFHTDRFEVAAAAVFLHSYIADQLSKE-----AYV-VLPTRISAEIT 303 (311)
T ss_dssp HHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHTT-----CSS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhh-----CCC-CCHHHHHHHHH
Confidence 456667777789 9999999999988888888777654 643 33447887775
No 26
>4g68_A ABC transporter; transport protein; HET: XYS; 1.80A {Caldanaerobius} PDB: 4g68_B*
Probab=48.85 E-value=18 Score=29.88 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
..++..+++..+...++|+||++++|++-
T Consensus 425 ~~~~~~~~~~~~~G~~t~eea~~~~q~~i 453 (456)
T 4g68_A 425 AQTHKDLVAQLFAKQITPEEYSKQMQQKI 453 (456)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 35677888888888899999999999864
No 27
>3i3v_A Probable secreted solute-binding lipoprotein; transporter, PSI-II, structural genomics, protein structure initiative; 2.30A {Streptomyces coelicolor}
Probab=48.32 E-value=17 Score=29.10 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 61 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 61 (216)
..++..++..++...++|+||++++|+...+
T Consensus 366 ~~~~~~~~~~~~~g~~t~e~a~~~~~~~~~~ 396 (405)
T 3i3v_A 366 AQPLITATSTSFTRGTSPARVRAALESAYRS 396 (405)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHhhC
Confidence 3678888999999999999999999876543
No 28
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=47.16 E-value=4 Score=34.49 Aligned_cols=43 Identities=19% Similarity=0.272 Sum_probs=32.7
Q ss_pred CCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcC
Q 027980 2 GSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG 45 (216)
Q Consensus 2 GsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qG 45 (216)
|++--.+..+.|.++++|++....+++++++ +++.|...+..|
T Consensus 18 G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~-i~~~l~~l~~~G 60 (319)
T 2dpo_A 18 GRSWAMLFASGGFRVKLYDIEPRQITGALEN-IRKEMKSLQQSG 60 (319)
T ss_dssp HHHHHHHHHHTTCCEEEECSCHHHHHHHHHH-HHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHHHHHHHHHcC
Confidence 3444455678899999999999999998765 566777766666
No 29
>4hs7_A Bacterial extracellular solute-binding protein, P; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: P33; 2.60A {Staphylococcus aureus subsp}
Probab=46.40 E-value=33 Score=27.72 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
.++..++.. +..|.+|++|.++|+++-.+.-|
T Consensus 377 ~~~~~~~~~-v~~g~~~~~al~~a~~~i~~~ik 408 (420)
T 4hs7_A 377 EPMGNASIF-ISNGKNPKQALDEATNDITQNIK 408 (420)
T ss_dssp HHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 356666654 55789999999999988777654
No 30
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=46.08 E-value=8.6 Score=35.97 Aligned_cols=45 Identities=20% Similarity=0.339 Sum_probs=36.9
Q ss_pred CCCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcCC
Q 027980 1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGL 46 (216)
Q Consensus 1 mGsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGl 46 (216)
||+|--.+..+.|..+++|++....+++++++ +++.|...+..|.
T Consensus 325 MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~-i~~~l~~~~~~G~ 369 (715)
T 1wdk_A 325 MGGGIAYQSASKGTPILMKDINEHGIEQGLAE-AAKLLVGRVDKGR 369 (715)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-HHHHHHHHHTTTS
T ss_pred hhHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHHHHHHHHhcCC
Confidence 45555566678899999999999999998888 6888888888884
No 31
>3k01_A Acarbose/maltose binding protein GACH; ABC transporter, acarbose-binding protein, transport protein; 1.35A {Streptomyces glaucescens} PDB: 3jzj_A* 3k00_A* 3k02_A*
Probab=45.02 E-value=30 Score=27.78 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.++..++.+++...+++++|.+++|+...+.
T Consensus 377 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~ 407 (412)
T 3k01_A 377 EPIRLQMANVLSGETSPDEAAANTGDAYRKL 407 (412)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4688889999998999999999998876554
No 32
>4gqo_A LMO0859 protein; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: MSE PGE; 2.10A {Listeria monocytogenes}
Probab=44.85 E-value=31 Score=27.71 Aligned_cols=33 Identities=12% Similarity=0.021 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 30 RNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 30 R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+...+.+++..+...+++++|++++|++.++.
T Consensus 398 ~~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 430 (433)
T 4gqo_A 398 QQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGV 430 (433)
T ss_dssp HHHHHHHTHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 333345667778888899999999998876654
No 33
>2vgq_A Maltose-binding periplasmic protein, mitochondrial antiviral-signaling protein; immune system/transport, IPS1/MAVS/VISA/cardif; HET: MTT; 2.1A {Escherichia coli}
Probab=44.67 E-value=74 Score=26.85 Aligned_cols=50 Identities=26% Similarity=0.205 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWD 83 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWD 83 (216)
.++..++.+++...+++++|++++|+...++.+... .-+-+.|-+...-|
T Consensus 356 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 405 (477)
T 2vgq_A 356 YAVRTAVINAASGRQTVDEALKDAQTNSAMAFAEDK--TYKYICRNFSNFCN 405 (477)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH--HHHHHHHTGGGGTT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhhhh--HHHHHHhccccccc
Confidence 457788888898889999999999998877655322 11255555555444
No 34
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=43.48 E-value=18 Score=29.07 Aligned_cols=31 Identities=19% Similarity=0.090 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 61 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 61 (216)
+.++..++++.+...++++||++++|+.-++
T Consensus 380 ~~~~~~~~~~~~~G~~t~e~al~~~~~~~~~ 410 (414)
T 3quf_A 380 STEGIAQQQKIVQGQISAKDAAKALDAKWAT 410 (414)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhHHHHhCCCCHHHHHHHHHHHHHH
Confidence 3467888999999999999999988876544
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=43.11 E-value=29 Score=29.89 Aligned_cols=30 Identities=30% Similarity=0.306 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAK 61 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 61 (216)
.++..++.+++....++++|.++||+..+.
T Consensus 341 ~~~~~~~~~~~~G~~~~~~al~~a~~~~~~ 370 (694)
T 3dm0_A 341 YAVRTAVINAASGRQTVDAALAAAQTNAAA 370 (694)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhhc
Confidence 478889999999889999999999987543
No 36
>1r6z_P Chimera of maltose-binding periplasmic protein AN argonaute 2; deviant OB fold, RNAI, gene regulation; HET: MAL; 2.80A {Escherichia coli} SCOP: b.34.14.1 c.94.1.1
Probab=42.87 E-value=8.1 Score=33.04 Aligned_cols=54 Identities=22% Similarity=0.192 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
.++..+|++++...+++++|++++|+...++.+. ...|.+.=|+ ...||+...-
T Consensus 342 ~~~~~~~~~~~~G~~t~~eal~~~~~~~~~~l~~--~~~~~~~~~~--p~~~~~~~~~ 395 (509)
T 1r6z_P 342 YAVRTAVINAASGRQTVDEALKDAQTNAAAEFVD--ISHKSFPISM--PMIEYLERFS 395 (509)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHCCCCC--SSCCCSSCEE--EHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh--hhhhccCCCc--cHHHHHHHHh
Confidence 4678888888988899999999999887655432 2234454454 4557776543
No 37
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=42.86 E-value=48 Score=26.90 Aligned_cols=55 Identities=11% Similarity=0.024 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhhh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYY 90 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalYy 90 (216)
.+.-.++...+.+|+++.||++.|......+.+.+...-+ || -.-|.+|-+.|+.
T Consensus 215 D~fsaai~a~l~~g~~l~~A~~~A~~~~~~ai~~~~~~~~---g~-~~~Gv~~e~~L~~ 269 (282)
T 3h74_A 215 DTLAAVIAGLLGRGYPLAPTLARANQWLNMAVAETIAQNR---TD-DRQGVALGDLLQA 269 (282)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC---SC-TTSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHhhCCC---Cc-hhcCCcHHHHHHH
Confidence 5778899999999999999999999888888777654321 23 2456666666665
No 38
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=42.53 E-value=45 Score=28.03 Aligned_cols=40 Identities=38% Similarity=0.466 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcCCCh-------------------HHHHHHHHHHHHHHHHHHHHHhhh
Q 027980 31 NVAIEKAVVDALSQGLSS-------------------NDAAKQAQKEGAKAAKLAKRQAKR 72 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~-------------------~eaAk~Aqk~g~kAAKlA~rQAkR 72 (216)
-.+||+|+.++ .-|++| +|-+|+|.+.+.+| |.|-|.+||
T Consensus 99 i~~IekAI~~S-~LglnP~~dG~~Iri~iP~LTeErRkelvK~ak~~~E~a-KvaIRniRr 157 (209)
T 4gfq_A 99 IGDIEKAILKA-DLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEA-KVAVRNVRR 157 (209)
T ss_dssp HHHHHHHHHHH-TSSCCCEECSSCEEEECCBCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCCCCcCCCceeeeCCCccHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 36789999887 567776 57888888887764 888888887
No 39
>1elj_A Maltodextrin-binding protein; protein-carbohydrate complex, maltose binding protein, MBP fold, ABC transporter fold, thermophilic protein; HET: CME GLC; 1.85A {Pyrococcus furiosus} SCOP: c.94.1.1
Probab=42.42 E-value=36 Score=27.10 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcCCC--hHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLS--SNDAAKQAQKEGAK 61 (216)
Q Consensus 32 ~A~e~AL~da~~qGls--~~eaAk~Aqk~g~k 61 (216)
.++..++++++...++ +++|.+++|++..+
T Consensus 346 ~~~~~~~~~~~~g~~~~~~~~al~~~~~~~~~ 377 (381)
T 1elj_A 346 GGVDGAINEILQDPQNADIEGILKKYQQEILN 377 (381)
T ss_dssp HHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH
Confidence 4577888888888899 99999999887544
No 40
>3oo8_A ABC transporter binding protein ACBH; class 2 SBP fold, ABC transporter extracellular solute bindi protein, D-galactose binding; 1.60A {Actinoplanes} PDB: 3oo6_A* 3oo7_A 3oo9_A 3ooa_A
Probab=42.38 E-value=22 Score=28.49 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcC--CChHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQG--LSSNDAAKQAQKEGAK 61 (216)
Q Consensus 32 ~A~e~AL~da~~qG--ls~~eaAk~Aqk~g~k 61 (216)
.++..+|++.+... +++++|.+++|++.++
T Consensus 381 ~~~~~~~~~~~~g~~~~t~~~al~~~~~~~~~ 412 (415)
T 3oo8_A 381 NAMIKLIQQFIDQPTPETIATVQKSAEDQAKT 412 (415)
T ss_dssp HHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHH
Confidence 67888899999988 8999998888876543
No 41
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=41.99 E-value=57 Score=27.05 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 65 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 65 (216)
..++..++.+++...+++++|.+.++++.+.+..+
T Consensus 340 ~~~~~~~~~~~~~G~~~~eeal~~~~~~~~~i~~~ 374 (449)
T 3iot_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAMATL 374 (449)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhh
Confidence 34788899999999999999999999998887754
No 42
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=41.71 E-value=15 Score=28.16 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAK 67 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~ 67 (216)
=.+.-.++.-++.+|+++.+|++.|...+..+.+.+.
T Consensus 209 GD~f~a~~~~~l~~g~~~~~a~~~a~~~~~~~~~~~~ 245 (258)
T 1ub0_A 209 GCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTAP 245 (258)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhh
Confidence 3567788999999999999999999887777665543
No 43
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=41.26 E-value=29 Score=27.91 Aligned_cols=63 Identities=10% Similarity=0.132 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 33 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 33 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
++.+.+.+...+.++..+..+.| +.++..|+...+++=+.+|-.|+.-...| |.+++||.+..
T Consensus 217 ~l~~~~~~~~~~~~~~~~i~~~a-~~gd~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgG~i~~ 281 (327)
T 2ap1_A 217 GFAWLYQHYYDQSLQAPEIIALW-EQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSN 281 (327)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred HHHHHHHHhcCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhc
Confidence 33333333333345666655544 56788888888888888888887665554 67888988764
No 44
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=39.75 E-value=24 Score=28.54 Aligned_cols=64 Identities=20% Similarity=0.259 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccc
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTIT 95 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~t 95 (216)
.+++.+.+.....+.+++.+..+.| +.++..|+...+++=+.+|-.|+.-...| |.+++||.+.
T Consensus 183 ~~~l~~~~~~~~~~~~~~~~i~~~a-~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~p~~ivlgG~i~ 248 (302)
T 3vov_A 183 GRALERDATYAFQRPVDTRELFRLF-QAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVA 248 (302)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESHHH
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhH
Confidence 3455555555555667777766555 45788888888888888888887766655 5788898876
No 45
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=39.68 E-value=48 Score=26.96 Aligned_cols=52 Identities=17% Similarity=0.059 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 33 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 33 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
..-.++.-.+.+|++ -+|+..|...-.+|+.+|.++.+ ||= +---|+++.||
T Consensus 196 ~Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~Ag~~a~~~~~---g~g-~~~~~l~d~l~ 247 (265)
T 1v8a_A 196 MVAALTGAFVAVTEP-LKATTSALVTFGIAAEKAYEEAK---YPG-SFHVKLYDWLY 247 (265)
T ss_dssp HHHHHHHHHHTTSCH-HHHHHHHHHHHHHHHHHHHHHCC---SHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHhCC---CCc-hHHHHHHHHHH
Confidence 456788888999999 99999999888889888877653 552 22368888887
No 46
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=39.19 E-value=37 Score=28.18 Aligned_cols=34 Identities=9% Similarity=0.072 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
+.++..++.+.+...+++++|.+++|+...++-+
T Consensus 381 ~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~ 414 (458)
T 3uor_A 381 VQEMRLVTERVVRGGQSHDAAVQELDQRVDEILA 414 (458)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 3478889999999999999999999998877644
No 47
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=38.59 E-value=1e+02 Score=25.75 Aligned_cols=60 Identities=22% Similarity=0.154 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH----------HHHHHhhhhhcchh------hcchhhhhhhhhc
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK----------LAKRQAKRIIGPII------AAGWDFFEAIYYG 91 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK----------lA~rQAkRI~GPii------ssgWDfFEalYyG 91 (216)
.++..++++++...+++++|++++|+...++.+ .+.++.++++-+++ ..-|.++..|+--
T Consensus 341 ~~~~~~~~~~~~G~~t~~eal~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lt~~q~~vl~~l~~~ 416 (487)
T 1hsj_A 341 YAVRTAVINAASGRQTVDEALAAAQTNAAAEFMSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRS 416 (487)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTCCCCCCCCSHHHHHHHHHHHHHHHHHHSSSCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhC
Confidence 467788888888889999999999988654221 23444444444443 3447777777654
No 48
>1urs_A Maltose-binding protein; maltodextrin-binding protein, acidophIle, thermoacidophIle, hyperthermophIle, thermophIle; HET: MLR; 1.45A {Alicyclobacillus acidocaldarius} SCOP: c.94.1.1 PDB: 1urg_A* 1urd_A*
Probab=36.87 E-value=22 Score=28.57 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.++.. |.+++...+++++|++++|+...+..
T Consensus 367 ~~~~~-~~~~~~g~~~~~~al~~~~~~~~~~l 397 (402)
T 1urs_A 367 QAMSI-LQNIIAGKVSPEQGAKDFVQNIQKGI 397 (402)
T ss_dssp HHTTH-HHHHHHTSSCHHHHHHHHHHHHHC--
T ss_pred HHHHH-HHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45666 88888888999999999998765543
No 49
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=36.50 E-value=8.4 Score=36.19 Aligned_cols=44 Identities=14% Similarity=0.270 Sum_probs=33.4
Q ss_pred CCCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcC
Q 027980 1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG 45 (216)
Q Consensus 1 mGsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qG 45 (216)
||+|--.+..+.|..+.+|++....+++++++ +++.|...+..|
T Consensus 323 MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~-i~~~l~~~~~~G 366 (725)
T 2wtb_A 323 MGSGIATALILSNYPVILKEVNEKFLEAGIGR-VKANLQSRVRKG 366 (725)
T ss_dssp HHHHHHHHHHTTTCCEEEECSSHHHHHHHHHH-HHHHHHHTTC--
T ss_pred hhHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHHHHHHHHhcC
Confidence 34444456678899999999999999999887 677887777776
No 50
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=36.40 E-value=41 Score=27.25 Aligned_cols=51 Identities=24% Similarity=0.246 Sum_probs=38.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 45 GLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 45 Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
.+++.+-.+. .+.++..|+..-+++=+.+|-.|+.-...| |.++.||.+..
T Consensus 220 ~~~~~~i~~~-a~~gD~~a~~~~~~~~~~La~~i~~l~~~ldP~~IvlgG~i~~ 272 (321)
T 3r8e_A 220 ELSPKVIADH-AAQGDALALAVWADIGTIIGESLVNIVRVMDLNNILLGGGISG 272 (321)
T ss_dssp SCCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGG
T ss_pred cCCHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhcc
Confidence 4455555544 456888888889999999998888766665 67888888764
No 51
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=36.03 E-value=40 Score=28.00 Aligned_cols=41 Identities=32% Similarity=0.396 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhcCCChHHHH------------------HHHHHHHHHHHHHHHHHh
Q 027980 30 RNVAIEKAVVDALSQGLSSNDAA------------------KQAQKEGAKAAKLAKRQA 70 (216)
Q Consensus 30 R~~A~e~AL~da~~qGls~~eaA------------------k~Aqk~g~kAAKlA~rQA 70 (216)
=|.|+-+|..|++.+|.=|+|-+ +.-++---.|+|+|.+.|
T Consensus 86 aQ~avA~AVaD~V~eG~iP~~~a~dl~Iiv~Vfi~p~a~D~~kiy~~NY~ATKlAI~RA 144 (169)
T 1y60_A 86 AQHGVAMAVQDAVAEGIIPADEADDLYVLVGVFIHWEAADDAKIQKYNYEATKLSIQRA 144 (169)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTTGGGEEEEEEECCCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCChhhcCcEEEEEEeecCccccCHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999998776654 445566667888887765
No 52
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=36.00 E-value=37 Score=28.31 Aligned_cols=28 Identities=32% Similarity=0.330 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
.++..+|++++...+++++|++++|+..
T Consensus 339 ~~~~~~~~~~~~G~~t~~~al~~~~~~~ 366 (461)
T 3csg_A 339 YAVRTAVINAASGRQTVDEALKDAQTRI 366 (461)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhh
Confidence 4677888888888899999998887754
No 53
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=35.40 E-value=45 Score=27.27 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
+++.+.+.....+.++..+-.+.| +.++..|+..-+++-+.+|-.|+.-...| |.++.||.+..
T Consensus 216 ~al~~~~~~~~~~~~~~~~i~~~a-~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~ 281 (327)
T 4db3_A 216 RGFELLYAHYYGEEKKAIDIIKAN-AAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSN 281 (327)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccc
Confidence 344444444444567777766554 46788888888898888888887665554 67888887764
No 54
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=35.32 E-value=23 Score=27.52 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLA 66 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA 66 (216)
.+.-.++.-++.+|+++.||++.|...+..+.+.+
T Consensus 216 D~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 216 CTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 56778899999999999999999988877777654
No 55
>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} SCOP: c.1.15.2 PDB: 1de5_A* 1de6_A*
Probab=35.05 E-value=34 Score=31.96 Aligned_cols=56 Identities=27% Similarity=0.451 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh
Q 027980 23 AAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF 85 (216)
Q Consensus 23 s~hvE~~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF 85 (216)
++-|--+ |++++||..|+ |-|.++-|+||.+++--..+|...--+-+ | +.+.||-|
T Consensus 343 ~A~vig~--rn~qkAll~AL---L~p~~~L~~~q~~gD~~~~lal~Ee~k~~-P-~~avwd~~ 398 (426)
T 1d8w_A 343 AAWVIGT--RNMKKALLRAL---LEPTAELRKLEAPGDYTARLALLEEQKSL-P-WQAVWEMY 398 (426)
T ss_dssp HHHHHHH--HHHHHHHHHHH---TSCHHHHHHHHTTTCHHHHHHHHHHHTTS-C-HHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHH---CCCHHHHHHHHHcCCHHHHHHHHHHHhcC-C-hHHHHHHH
Confidence 3444444 46788888888 67999999999999998888876544433 2 56778866
No 56
>3cay_A LPD-12; alpha helix, acyl chains, detergent, amphiphilic, lipopeptide, SELF-assembling peptide, de novo protein; HET: O12 LMT; 1.20A {Synthetic} PDB: 3cba_A*
Probab=34.88 E-value=33 Score=21.13 Aligned_cols=15 Identities=53% Similarity=0.488 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHH
Q 027980 50 DAAKQAQKEGAKAAK 64 (216)
Q Consensus 50 eaAk~Aqk~g~kAAK 64 (216)
.|||.|.....||||
T Consensus 9 kaakyaaeaaekaak 23 (27)
T 3cay_A 9 KAAKYAAEAAEKAAK 23 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 345555555555555
No 57
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=34.31 E-value=86 Score=25.09 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
.+.-.++..++.+|+++.||++.|......+-+.+.+
T Consensus 226 D~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t~~ 262 (289)
T 3pzs_A 226 DLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKTQE 262 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5777899999999999999999999888877777655
No 58
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=34.22 E-value=46 Score=30.78 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF 85 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF 85 (216)
|++++||..|+- -+.++.++||.+++--.++|...--+-+ -+.+.||-|
T Consensus 348 r~~qka~~~AlL---~~~~~L~~~q~~~D~~~~l~~~ee~k~~--p~~~vw~~~ 396 (424)
T 3p14_A 348 RNVIKALLFAML---IPHKQLKEWQETGDYTRRLAVLEEFKTY--PLGAIWNEY 396 (424)
T ss_dssp HHHHHHHHHHHT---SCHHHHHHHHHTTCHHHHHHHHHHGGGS--SHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCHHHHHHHHHcCCHHHHHHHHHHHhcC--ChHHHHHHH
Confidence 446778777775 6899999999999999999985433322 356788866
No 59
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=33.94 E-value=68 Score=26.21 Aligned_cols=39 Identities=26% Similarity=0.350 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCCh-------------------HHHHHHHHHHHHHHHHHHHHHhhh
Q 027980 31 NVAIEKAVVDALSQGLSS-------------------NDAAKQAQKEGAKAAKLAKRQAKR 72 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~-------------------~eaAk~Aqk~g~kAAKlA~rQAkR 72 (216)
-.+||+|+.+ .-|++| +|-+|+|.+.+.+ ||.|-|..||
T Consensus 78 i~~IekAI~~--dLglnP~~dG~~Iri~iP~lTeErRkelvK~~k~~~E~-aKvaiRniRr 135 (184)
T 1ge9_A 78 VPAIEKAIRE--ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEE-ARVRVRNVRR 135 (184)
T ss_dssp HHHHHHHHHH--HHCSCCEEETTEEEEECCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCcccCCCEEEEeCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 4689999998 778876 4677777776655 5678887776
No 60
>3osq_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 1.90A {Escherichia coli}
Probab=32.94 E-value=37 Score=31.34 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
+.++..++.+++....++++|.+++|++-.++.+
T Consensus 622 ~~~l~~~l~~vl~G~~~peeAL~~a~~~i~~~i~ 655 (661)
T 3osq_A 622 WYAVRTAVINAASGRQTVDEDLKDAQTRITKGSH 655 (661)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3478889999999999999999999988777655
No 61
>3py7_A Maltose-binding periplasmic protein,paxillin LD1, chimera; viral protein; HET: MLR; 2.29A {Escherichia coli}
Probab=32.84 E-value=44 Score=28.66 Aligned_cols=32 Identities=28% Similarity=0.242 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
+.++..++.+++...+++++|.++++++-.+.
T Consensus 341 ~~~~~~~i~~~~~G~~t~eeal~~~~~~~~~i 372 (523)
T 3py7_A 341 WYAVRTAVINAASGRQTVDAALAAAQTNAAAM 372 (523)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhh
Confidence 35788999999999999999999999887764
No 62
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=31.82 E-value=38 Score=28.34 Aligned_cols=30 Identities=30% Similarity=0.271 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGA 60 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~ 60 (216)
..++..++.+++...+++++|.+++++...
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~al~~~~~~~~ 369 (581)
T 3o3u_N 340 WYAVRTAVINAASGRQTVDAALAAAQTNAA 369 (581)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 457888999999999999999998877544
No 63
>1mh3_A Maltose binding-A1 homeodomain protein chimera; MATA1, binding cooperativity, maltose binding protein, MBP, sugar binding, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.4.1.1 c.94.1.1 PDB: 1mh4_A 1le8_A
Probab=31.82 E-value=36 Score=27.51 Aligned_cols=31 Identities=32% Similarity=0.312 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.++..++.+++...+++++|.+++++....+
T Consensus 341 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 371 (421)
T 1mh3_A 341 YAVRTAVINAASGRQTVDAALAAAQTAAAAA 371 (421)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhccccChhhhhhhhhhhhhhh
Confidence 5678888888988899999999988876544
No 64
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=31.57 E-value=16 Score=29.18 Aligned_cols=39 Identities=5% Similarity=0.142 Sum_probs=29.0
Q ss_pred eeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcCC
Q 027980 7 ACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGL 46 (216)
Q Consensus 7 ACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGl 46 (216)
.+..+.|.++.+|++...++++++++. ++.|...+..|.
T Consensus 32 ~~la~~G~~V~~~d~~~~~~~~~~~~i-~~~l~~~~~~g~ 70 (302)
T 1f0y_A 32 QVAAATGHTVVLVDQTEDILAKSKKGI-EESLRKVAKKKF 70 (302)
T ss_dssp HHHHHTTCEEEEECSCHHHHHHHHHHH-HHHHHHHHHTTS
T ss_pred HHHHhCCCeEEEEECCHHHHHHHHHHH-HHHHHHHHHcCC
Confidence 445677999999999999999886654 346666666664
No 65
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=31.09 E-value=15 Score=33.97 Aligned_cols=31 Identities=29% Similarity=0.293 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.++..++.+++...+++++|.++||++....
T Consensus 345 ~~~~~~l~~v~~G~~t~eeAl~~a~~~~~~~ 375 (805)
T 2nvu_B 345 YAVRTAVINAASGRQTVDAALAAAQTNAAAD 375 (805)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHhhhc
Confidence 4677888888888899999999998876543
No 66
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=30.93 E-value=27 Score=27.92 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=30.3
Q ss_pred CCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcC
Q 027980 2 GSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG 45 (216)
Q Consensus 2 GsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qG 45 (216)
|++-..+..+.|.++.+|++....+++++++ +++.+...+..|
T Consensus 16 G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~-i~~~~~~~~~~g 58 (283)
T 4e12_A 16 GSQIAFQTAFHGFAVTAYDINTDALDAAKKR-FEGLAAVYEKEV 58 (283)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHH-HHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH-HHHHHHHHHHhc
Confidence 3333445567799999999999999988765 455566666554
No 67
>2apl_A Hypothetical protein PG0816; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG, U function; 2.01A {Porphyromonas gingivalis} SCOP: a.258.1.1
Probab=30.23 E-value=65 Score=26.52 Aligned_cols=30 Identities=33% Similarity=0.350 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 027980 29 ARNVAIEKAVVDALSQGLSSNDAAKQAQKE 58 (216)
Q Consensus 29 ~R~~A~e~AL~da~~qGls~~eaAk~Aqk~ 58 (216)
+|...--.|-.+|+.+|.|+.+|-..|-++
T Consensus 36 ~Rad~Aa~aYe~A~~~G~~~~~A~e~A~~v 65 (157)
T 2apl_A 36 ARSDEALTAYCDAVAQGFSHPEAESMASEV 65 (157)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 455556678899999999999988877654
No 68
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=30.10 E-value=54 Score=28.29 Aligned_cols=28 Identities=29% Similarity=0.291 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKE 58 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~ 58 (216)
..++..++.+++...+++++|.+++++.
T Consensus 341 ~~~~~~~l~~v~~G~~t~eeAl~~~~~~ 368 (522)
T 3mp6_A 341 WYAVRTAVINAASGRQTVDEALAAAQTN 368 (522)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 3478889999999999999998888764
No 69
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=28.25 E-value=92 Score=24.58 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 253 DaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v 284 (320)
T 3ie7_A 253 DVFVGAFIAGLAMNMPITETLKVATGCSASKV 284 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57888999999999999999998887665543
No 70
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=28.12 E-value=64 Score=25.29 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=35.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccc
Q 027980 46 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTIT 95 (216)
Q Consensus 46 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~t 95 (216)
++..+..+. .+.++..|+...+++=+.+|-.|+.-...| |.+++||.+.
T Consensus 188 ~~~~~v~~~-a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgG~i~ 238 (292)
T 2gup_A 188 WDGRKIYQE-AAAGNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSIS 238 (292)
T ss_dssp CCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGG
T ss_pred CCHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccc
Confidence 455555544 457888888888888888888887766655 6788888764
No 71
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=27.99 E-value=51 Score=28.27 Aligned_cols=32 Identities=28% Similarity=0.243 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
..++..++.+++...+++++|.+.+++..++.
T Consensus 340 ~~~~~~~i~~vl~G~~t~eeAl~~~~~~i~~e 371 (500)
T 3ob4_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAR 371 (500)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 35788999999999999999999998865443
No 72
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=27.55 E-value=1e+02 Score=24.35 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 273 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 304 (332)
T 2qcv_A 273 DSYASAFLYALISGKGIETALKYGSASASIVV 304 (332)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999987766554
No 73
>2zxt_A Maltose-binding periplasmic protein, linker, MITO intermembrane space import AND...; disulfide bond, alpha helix, fusion, sugar transport; HET: MAL; 3.00A {Escherichia coli}
Probab=27.42 E-value=62 Score=27.46 Aligned_cols=28 Identities=32% Similarity=0.394 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
.++..+|++++...+++++|++++|+..
T Consensus 341 ~~~~~~l~~~~~G~~t~~eal~~~~~~~ 368 (465)
T 2zxt_A 341 YAVRTAVINAASGRQTVDEALKDAQTNS 368 (465)
T ss_dssp HHHHHHHHHHHTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4677888888888899999988887643
No 74
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=27.03 E-value=98 Score=24.64 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 262 Daf~ag~~~~l~~g~~~~~a~~~A~~~aa~~ 292 (325)
T 3h49_A 262 DNFASGFIAALLEGKNLRECARFANATAAIS 292 (325)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999888765544
No 75
>3oyv_A Imelysin; outer membrane protein, extracellular active site, metal BIN protein, structural genomics; HET: MSE; 1.25A {Bacteroides ovatus atcc 8483} PDB: 3n8u_A*
Probab=26.97 E-value=1.4e+02 Score=26.25 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=43.6
Q ss_pred EEee-chhHHHHHH-HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhhcchhh
Q 027980 17 YFYN-IRAAHVERA-RNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRI-IGPIIAAGWDF 84 (216)
Q Consensus 17 Y~yn-IRs~hvE~~-R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI-~GPiissgWDf 84 (216)
|+.+ |++..-..+ ..+++..|+..-.. +|+++...+.+..-++|..+..|..-+ +||+...+||.
T Consensus 233 ~ad~vi~P~Y~~l~~~a~~L~~a~~a~~a---~Pt~~~L~aar~Aw~~Ar~~w~~~E~frfGP~~~~~~~~ 300 (361)
T 3oyv_A 233 YVDAVVVPTYKSLKEKNDALYNAVIVLAD---NPSNSAFETACDAWITAREPWEKSEAFLFGPVDEMGLDP 300 (361)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHH---SCCHHHHHHHHHHHHHHHHHHHTTGGGCCGGGGSTTHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHH
Confidence 4444 455554433 23455555554443 477778888888889999999888764 69999877764
No 76
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=26.90 E-value=77 Score=25.14 Aligned_cols=33 Identities=12% Similarity=0.039 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
.+.-.+|.-++.+|+++.+|++.|...+..+.+
T Consensus 235 D~f~a~~~a~l~~g~~~~~A~~~A~a~a~~~v~ 267 (288)
T 1jxh_A 235 CTLSAALAALRPRHRSWGETVNEAKAWLSAALA 267 (288)
T ss_dssp HHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 567788999999999999999988876665543
No 77
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=26.87 E-value=96 Score=24.27 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 256 D~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 286 (309)
T 3umo_A 256 DSMVGAMTLKLAENASLEEMVRFGVAAGSAA 286 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999888655443
No 78
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=26.80 E-value=1.1e+02 Score=23.97 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|+..++.+.
T Consensus 249 DaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v 280 (306)
T 2abq_A 249 DSVVAGFLAALQEGKSLEDAVPFAVAAGSATA 280 (306)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57778899999999999999999887666554
No 79
>3h4z_A Maltose-binding periplasmic protein fused with Al DERP7; MBP fusion, AHA1/BPI domain-like, super roll, sugar T transport, allergen; HET: GLC; 2.35A {Escherichia coli}
Probab=26.74 E-value=1.2e+02 Score=26.77 Aligned_cols=29 Identities=28% Similarity=0.252 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
..++..++.+++...+++++|.++++++.
T Consensus 340 ~~~l~~~l~~vl~G~~~~eeAl~~~~~~~ 368 (568)
T 3h4z_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNA 368 (568)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 35788999999999999999999999983
No 80
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=26.66 E-value=60 Score=25.65 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=15.8
Q ss_pred HHHHHhcCCChHHHHHHHH
Q 027980 38 VVDALSQGLSSNDAAKQAQ 56 (216)
Q Consensus 38 L~da~~qGls~~eaAk~Aq 56 (216)
+.+.+.+|++|+||++++-
T Consensus 67 iv~~m~~G~~~~~A~~~~i 85 (141)
T 1apy_B 67 AVEYMRRGEDPTIACQKVI 85 (141)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 4567779999999998876
No 81
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=26.64 E-value=1e+02 Score=24.19 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 265 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 295 (319)
T 3pl2_A 265 DAFGGALCHGLLSEWPLEKVLRFANTAGALV 295 (319)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999887665544
No 82
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=26.56 E-value=20 Score=32.12 Aligned_cols=45 Identities=24% Similarity=0.460 Sum_probs=33.8
Q ss_pred CCCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcCC
Q 027980 1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGL 46 (216)
Q Consensus 1 mGsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGl 46 (216)
||+|--.+..+.|.++++|++....+++++++ +++.|...+..|.
T Consensus 16 MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~-i~~~l~~~~~~g~ 60 (483)
T 3mog_A 16 MGAGIAEVAASHGHQVLLYDISAEALTRAIDG-IHARLNSRVTRGK 60 (483)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH-HHHHHHTTTTTTS
T ss_pred HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHHHHHHHHHcCC
Confidence 45555556678899999999999999998765 4555766666664
No 83
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=26.40 E-value=1e+02 Score=24.17 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 258 DaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v 289 (313)
T 2v78_A 258 DAMAGTFVSLYLQGKDIEYSLAHGIAASTLVI 289 (313)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57788899999999999999999887665543
No 84
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=26.29 E-value=71 Score=25.63 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=37.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 46 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 46 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
++..+..+ +.+.++..|+..-+++-+.+|-.|+.-...| |.++.||.+.+
T Consensus 198 ~~~~~i~~-~a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~p~~IvlgGgi~~ 249 (297)
T 4htl_A 198 ITGEEIFA-NYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITS 249 (297)
T ss_dssp CCHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred CCHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccc
Confidence 34445444 4466888899999999999998888776666 67999998875
No 85
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=25.85 E-value=1.1e+02 Score=24.02 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 251 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v 282 (309)
T 1v1a_A 251 DAFAAGYLAGAVWGLPVEERLRLANLLGASVA 282 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999886665543
No 86
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.74 E-value=20 Score=30.38 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=31.9
Q ss_pred CCCcceeee---eecceeEEEeechhHHHHHHHHHHHHHHHHH
Q 027980 1 MGSGTVACG---VKEGVKLYFYNIRAAHVERARNVAIEKAVVD 40 (216)
Q Consensus 1 mGsGtlACa---vKEGVKLY~ynIRs~hvE~~R~~A~e~AL~d 40 (216)
|||=-|+|. .+.|+.+++.+. +++|-++|+..+...|++
T Consensus 10 ~~~~~l~l~~~l~~~gi~~~l~~~-~SlI~raRN~lv~~Fl~~ 51 (203)
T 2c0n_A 10 MGSVRLPLIDFLVKNDIEYVILSR-RNHVAVQREIALDMFLEM 51 (203)
T ss_dssp SSCCCHHHHHHHHHTTCCEEEECC-CSCHHHHHHHHHHHHHHC
T ss_pred CCceehHHHHHHHhCCCeEEEEcc-ccchHHHHHHHHHHHHhc
Confidence 455555553 569999999999 999999999999888875
No 87
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=25.65 E-value=1e+02 Score=24.06 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++..++.+|+++.+|++.|...++.+.
T Consensus 256 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~ 287 (309)
T 3cqd_A 256 DSMVGAMTLKLAENASLEEMVRFGVAAGSAAT 287 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57778899999999999999999987666544
No 88
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=25.52 E-value=1.1e+02 Score=24.71 Aligned_cols=32 Identities=31% Similarity=0.386 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 285 Daf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v 316 (336)
T 4du5_A 285 DGFAVGVISALLDGLGVPEAVKRGAWIGARAV 316 (336)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57888999999999999999999887765543
No 89
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=24.99 E-value=1.1e+02 Score=24.04 Aligned_cols=31 Identities=6% Similarity=0.055 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 247 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 277 (302)
T 2c4e_A 247 DSYRAGFLSAYVKGYDLEKCGLIGAATASFV 277 (302)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4778889999999999999999887765544
No 90
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=24.93 E-value=1.2e+02 Score=23.62 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|.++.+|++.|...++.+.
T Consensus 249 Daf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v 280 (306)
T 2jg5_A 249 DSTVAGMVAGIASGLSIEKAFQQAVACGTATA 280 (306)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999887665544
No 91
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=24.91 E-value=1.1e+02 Score=24.31 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 257 Daf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v 288 (328)
T 3kzh_A 257 DSFVAGLGYGYMNKMPIEDIVKFAMTMSNITI 288 (328)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57888999999999999999998877665443
No 92
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=24.83 E-value=1.1e+02 Score=24.78 Aligned_cols=53 Identities=13% Similarity=-0.041 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 89 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 89 (216)
.+.-.++..++.+|+++.||++.|......|-+. +.+.=.| -.-|..|.+.|+
T Consensus 225 D~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~----~~~~~~~-~~~gv~~e~~L~ 277 (291)
T 3mbh_A 225 DTFTSVITGSLMQGDSLPMALDRATQFILQGIRA----TFGYEYD-NREGILLEKVLH 277 (291)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT----TTTSCCC-GGGCSCHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH----HHhcCCC-cccCCcHHHHHH
Confidence 5678899999999999999999988766665543 3333233 234555555553
No 93
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.80 E-value=1.1e+02 Score=23.77 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 247 D~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 277 (296)
T 2qhp_A 247 DSFTAAFCASILNGKSVPEAHKLAVEVSAYV 277 (296)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4677888999999999999999988755443
No 94
>3osr_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 2.00A {Escherichia coli}
Probab=24.72 E-value=63 Score=29.79 Aligned_cols=28 Identities=29% Similarity=0.298 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
.++..||+......-.|++|+++||++-
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (653)
T 3osr_A 624 YAVRTAVINAASGRQTVDEDLKDAQTRI 651 (653)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 5889999998887779999999999864
No 95
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=24.64 E-value=1.1e+02 Score=24.48 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 274 DaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v 305 (330)
T 2jg1_A 274 DSTVAGITSAILNHENDHDLLKKANTLGMLNA 305 (330)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57778899999999999999999887665443
No 96
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=24.62 E-value=1.2e+02 Score=23.71 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 255 D~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~ 286 (309)
T 1rkd_A 255 DTFNGALITALLEEKPLPEAIRFAHAAAAIAV 286 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 47778899999999999999998887655443
No 97
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=24.43 E-value=1.2e+02 Score=24.51 Aligned_cols=31 Identities=13% Similarity=0.173 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 279 Daf~a~~~~~l~~g~~l~~a~~~A~~~aa~~ 309 (328)
T 4e69_A 279 DSFNAGLLDSVLAGQPLETAIAAAAALAGQV 309 (328)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 6778899999999999999999888766554
No 98
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=24.40 E-value=39 Score=23.93 Aligned_cols=15 Identities=40% Similarity=0.536 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhcC
Q 027980 31 NVAIEKAVVDALSQG 45 (216)
Q Consensus 31 ~~A~e~AL~da~~qG 45 (216)
..||-+||.||+.+|
T Consensus 10 ~~aILkaLdeaIe~G 24 (57)
T 3fxd_A 10 KETILKALNDAIEKG 24 (57)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 689999999999998
No 99
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=24.37 E-value=1.2e+02 Score=24.12 Aligned_cols=33 Identities=9% Similarity=-0.078 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 64 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 64 (216)
.+.-.++.-++.+|+++.+|++.|...++.+..
T Consensus 246 DaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~ 278 (306)
T 3bf5_A 246 DSFRAGLYLALYNRRSIEKGMIYGTIIAHHVID 278 (306)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 577788999999999999999998877665543
No 100
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=24.14 E-value=1.1e+02 Score=24.37 Aligned_cols=31 Identities=23% Similarity=0.188 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++..++.+|+++.+|++.|...++.+
T Consensus 260 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 290 (330)
T 3iq0_A 260 DCFGGAWIACRQLGFDAHRALQYANACGALA 290 (330)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5777899999999999999999887766544
No 101
>3f5f_A Maltose-binding periplasmic protein, heparan sulfate 2-O-sulfotransferase 1; maltose binding protein, fusion, heparan sulfate biosynthesis; HET: GLC A3P; 2.65A {Escherichia coli k-12}
Probab=24.12 E-value=43 Score=29.90 Aligned_cols=32 Identities=28% Similarity=0.247 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 31 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 31 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
..++..++.+++...+++++|.+++++...++
T Consensus 340 ~~~~~~~i~~vl~G~~t~eeal~~~~~~i~~~ 371 (658)
T 3f5f_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAD 371 (658)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 34788999999999999999999999886655
No 102
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=24.00 E-value=70 Score=25.27 Aligned_cols=50 Identities=16% Similarity=0.219 Sum_probs=35.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 46 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 46 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
++..+..+ +.+.++..|+...+++=+.+|-.|+.-.-.| |.+++||.+.+
T Consensus 223 ~~~~~v~~-~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgGg~~~ 274 (326)
T 2qm1_A 223 VSSKDVFE-FAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSA 274 (326)
T ss_dssp CCHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEESGGG
T ss_pred CCHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcChhhh
Confidence 34544443 4467788888888888888888887665554 67888887764
No 103
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=23.90 E-value=34 Score=30.96 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCCcceeeeeecceeEEEeechhHHHHHHHHHHHHHHHHHHHhcCC
Q 027980 1 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGL 46 (216)
Q Consensus 1 mGsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGl 46 (216)
||+|--.|..+-|..+.+|++... +++++ +++.|..++..|.
T Consensus 65 MG~~IA~~la~aG~~V~l~D~~~e---~a~~~-i~~~l~~~~~~G~ 106 (460)
T 3k6j_A 65 MGKAMAICFGLAGIETFLVVRNEQ---RCKQE-LEVMYAREKSFKR 106 (460)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHH---HHHHH-HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHCCCeEEEEECcHH---HHHHH-HHHHHHHHHHcCC
Confidence 455555677788999999999887 44443 6778888888774
No 104
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=23.82 E-value=1.3e+02 Score=23.87 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 257 DaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 288 (323)
T 2f02_A 257 DATIAGLAYGLAKDAPAAELLKWGMAAGMANA 288 (323)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999887665544
No 105
>2heu_A Sugar ABC transporter, sugar-binding protein; periplasmic binding protein, transport protein; 1.04A {Streptococcus pneumoniae} PDB: 2hq0_A 2i58_A* 2hfb_A
Probab=23.78 E-value=67 Score=25.81 Aligned_cols=27 Identities=4% Similarity=0.009 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEG 59 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 59 (216)
.++..+|++++... +++||++++|++.
T Consensus 370 ~~~~~~~~~~~~G~-~~~~al~~~~~~~ 396 (401)
T 2heu_A 370 ADFHTLTMNYVLTG-DKQGMVNDLNAFF 396 (401)
T ss_dssp HHHHHHHHHHHHHC-CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 46788888888877 9999999888753
No 106
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=23.76 E-value=1.1e+02 Score=24.31 Aligned_cols=31 Identities=26% Similarity=0.176 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 280 DaF~ag~~~~l~~g~~l~~a~~~A~a~aa~~ 310 (346)
T 3ktn_A 280 DAYAAGILYGYSQNWSLEKAVTFATVNGVLA 310 (346)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 6788899999999999999999887666544
No 107
>3anp_C Transcriptional repressor, TETR family; all alpha protein, DNA, acyl-COA; HET: DCC DAO; 1.95A {Thermus thermophilus} PDB: 3ang_C*
Probab=23.58 E-value=1.4e+02 Score=20.95 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=29.0
Q ss_pred echhHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHH
Q 027980 20 NIRAAHVERARNVAIEKAVVDALSQG---LSSNDAAKQAQ 56 (216)
Q Consensus 20 nIRs~hvE~~R~~A~e~AL~da~~qG---ls~~eaAk~Aq 56 (216)
+.|..+.+..|++.++.|+.--..+| .|..|-|+.|.
T Consensus 1 ~~r~~~~~~~r~~Il~aA~~lf~~~G~~~~t~~~Ia~~Ag 40 (204)
T 3anp_C 1 AVREYQKKRRRERIFRAAMELFRNRGFQETTATEIAKAAH 40 (204)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHcC
Confidence 35777888889988888888777776 68889888874
No 108
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=23.53 E-value=1.1e+02 Score=24.18 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 266 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 296 (319)
T 3lhx_A 266 DSFSAGYLAVRLTGGSAENAAKRGHLTASTV 296 (319)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhh
Confidence 4777899999999999999999887766544
No 109
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=23.44 E-value=1.2e+02 Score=25.00 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 306 DaF~ag~l~~l~~g~~l~~al~~A~aaaa~~ 336 (352)
T 4e84_A 306 DTVIATVATMLGAGVPLVDAVVLANRAAGIV 336 (352)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5777899999999999999999988766554
No 110
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=23.38 E-value=1.3e+02 Score=23.91 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 272 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v 303 (312)
T 2hlz_A 272 DTFNASVIFSLSQGRSVQEALRFGCQVAGKKC 303 (312)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999887766543
No 111
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=23.29 E-value=1.2e+02 Score=24.15 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 258 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 288 (311)
T 1vm7_A 258 DVFNGAFAVALSEGKNPEEAVIFGTAAAAIS 288 (311)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 4778889999999999999999888665544
No 112
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=23.26 E-value=1.2e+02 Score=23.84 Aligned_cols=31 Identities=16% Similarity=0.017 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhc-CCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQ-GLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~q-Gls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+ |+++.+|++.|...++.+
T Consensus 246 DaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~ 277 (298)
T 1vk4_A 246 DTCTAAFLVGFVFKKMSIEKATKFAAAVTSVK 277 (298)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4777889999999 999999999887655543
No 113
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=23.20 E-value=92 Score=26.34 Aligned_cols=49 Identities=33% Similarity=0.420 Sum_probs=37.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 47 SSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 47 s~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
+..+.. ++.+.++..|+...+++=+.+|-.|+.-..+| |.+++||.+..
T Consensus 319 ~~~~i~-~~a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP~~IvlgG~i~~ 369 (429)
T 1z05_A 319 SIEDIC-AAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQ 369 (429)
T ss_dssp CHHHHH-HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred CHHHHH-HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 444444 44567888888889999999998888776665 68899998765
No 114
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=23.20 E-value=3.1e+02 Score=22.83 Aligned_cols=51 Identities=18% Similarity=0.176 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 027980 25 HVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPI 77 (216)
Q Consensus 25 hvE~~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPi 77 (216)
.+|.+|...+.- .+++.+|......+-.|+-....++..+.+.|-+|.|..
T Consensus 314 ~~~aar~~~~~a--a~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~ 364 (404)
T 2jif_A 314 QLEAARLLTYNA--ARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGV 364 (404)
T ss_dssp HHHHHHHHHHHH--HHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH--HHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 344455433322 344567766555555666677778888888999999975
No 115
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=22.77 E-value=1.2e+02 Score=24.19 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAK 61 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 61 (216)
.+.--++.-++.+|++++||.+.|...++.
T Consensus 293 DaF~ag~l~~l~~g~~~~~al~~A~aaaal 322 (351)
T 4gm6_A 293 DAYTAAVLHGILSEWRPDETVKFATAAAGL 322 (351)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 466778889999999999999988766544
No 116
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=22.50 E-value=1.3e+02 Score=24.12 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 253 DaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v 284 (326)
T 3b1n_A 253 DAFRGGLLYGIEHGFDWATAGRLASLMGALKI 284 (326)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999998886655443
No 117
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=22.47 E-value=1.2e+02 Score=23.68 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|.+.|...++.+
T Consensus 256 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 286 (311)
T 2dcn_A 256 DALGGTFLSLYYKGFEMEKALDYAIVASTLN 286 (311)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5778889999999999999999888765544
No 118
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=22.28 E-value=3.2e+02 Score=22.28 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=29.9
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 027980 40 DALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPI 77 (216)
Q Consensus 40 da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPi 77 (216)
..+.+|......+..|+-....++..+.+.|-+|.|.+
T Consensus 312 ~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 349 (387)
T 3nf4_A 312 RRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGV 349 (387)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcH
Confidence 45667777666677777778888888999999999975
No 119
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=22.26 E-value=1.3e+02 Score=24.67 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.+|.-++.+|+++.+|.+.|...++.+.
T Consensus 338 DaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v 369 (383)
T 2abs_A 338 DAFVGGFLYALSQGKTVKQCIMCGNACAQDVI 369 (383)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999998887665543
No 120
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=22.25 E-value=1.2e+02 Score=24.96 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 320 DaF~ag~l~~l~~g~~l~~a~~~A~aaAa~~ 350 (370)
T 3vas_A 320 DAFAAGFIADYIRGKPMITSLHAAVKAAAYI 350 (370)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999888666544
No 121
>2qko_A Possible transcriptional regulator, TETR family P; TETR family protein, structural genomics, P protein structure initiative; 2.35A {Rhodococcus SP}
Probab=22.03 E-value=74 Score=22.71 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=22.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHH
Q 027980 21 IRAAHVERARNVAIEKAVVDALSQG---LSSNDAAKQA 55 (216)
Q Consensus 21 IRs~hvE~~R~~A~e~AL~da~~qG---ls~~eaAk~A 55 (216)
-|....+..|++.++.|+.-...+| .|..+-|+.|
T Consensus 21 ~R~~r~~~~r~~Il~aa~~lf~~~G~~~~tv~~IA~~a 58 (215)
T 2qko_A 21 GHMAQNPERRAALVNAAIEVLAREGARGLTFRAVDVEA 58 (215)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCTTTCCHHHHHHHS
T ss_pred ccccccHHHHHHHHHHHHHHHHHhChhhccHHHHHHHc
Confidence 3545566778888888877777766 6888888876
No 122
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=21.95 E-value=1.3e+02 Score=24.42 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++..++.+|+++.+|++.|...++.+.
T Consensus 276 DaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v 307 (343)
T 2rbc_A 276 DIFHGTFALAMAEGMQSRAAVRLSSVAAALKC 307 (343)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57788899999999999999999887665443
No 123
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=21.90 E-value=1.2e+02 Score=24.11 Aligned_cols=31 Identities=6% Similarity=0.039 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 300 Daf~ag~~~~l~~g~~~~~a~~~A~~~aa~~ 330 (345)
T 1bx4_A 300 DAFVGGFLSQLVSDKPLTECIRAGHYAASII 330 (345)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5778889999999999999999888766544
No 124
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=21.70 E-value=1.4e+02 Score=23.57 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|.+.|...++.+.
T Consensus 255 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 286 (317)
T 2nwh_A 255 DAMASGYLAAIAEGKTIREALRQGAAAAAITV 286 (317)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 47778899999999999999998887665543
No 125
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=21.65 E-value=2e+02 Score=22.08 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=26.3
Q ss_pred HHHHHHH-HHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 027980 34 IEKAVVD-ALSQGLSSNDAAKQAQKEGAKAAKLAKR 68 (216)
Q Consensus 34 ~e~AL~d-a~~qGls~~eaAk~Aqk~g~kAAKlA~r 68 (216)
+-.||.+ ++..|+++++|.+-+..-..-+++++..
T Consensus 182 ~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~~ 217 (247)
T 3gt0_A 182 IIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVLE 217 (247)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3457777 8889999999888777776667777643
No 126
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=21.50 E-value=1.4e+02 Score=23.98 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 62 (216)
.+.--++.-++.+|+++.+|++.|...++.+
T Consensus 301 DaF~ag~l~~l~~g~~l~~a~~~a~~~aa~~ 331 (347)
T 3otx_A 301 DAFMGGFLSAYAVGKDLRRCCETGHYTAQEV 331 (347)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4777899999999999999999888765544
No 127
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=21.26 E-value=1.5e+02 Score=24.19 Aligned_cols=32 Identities=13% Similarity=-0.027 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.--++.-++.+|++..+|++.|...++.+.
T Consensus 317 DaF~agfl~~l~~g~~l~~a~~~a~~~Aa~~v 348 (365)
T 3loo_A 317 DAFVGGFLAQLLQSRTVDVCIKCGIWAAREII 348 (365)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 68888999999999999999998886655443
No 128
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=21.23 E-value=85 Score=25.36 Aligned_cols=50 Identities=20% Similarity=0.317 Sum_probs=37.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 027980 46 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 96 (216)
Q Consensus 46 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 96 (216)
++..+-.+. .+.++..|+...+++=+.+|-.|+.-...| |.+++||.+..
T Consensus 213 ~~~~~i~~~-a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~ 264 (321)
T 3vgl_A 213 IEGKHISEA-ARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSD 264 (321)
T ss_dssp CCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred CCHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhc
Confidence 455555544 456888888888998888888888766665 77889988765
No 129
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=21.21 E-value=1.5e+02 Score=23.89 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 63 (216)
Q Consensus 32 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 63 (216)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 267 DaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 298 (334)
T 2pkf_A 267 DAFRAGFLTGRSAGLGLERSAQLGSLVAVLVL 298 (334)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999998886665443
No 130
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=20.98 E-value=1.4e+02 Score=23.47 Aligned_cols=31 Identities=23% Similarity=0.124 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHh--cCCChHHHHHHHHHHHHHH
Q 027980 32 VAIEKAVVDALS--QGLSSNDAAKQAQKEGAKA 62 (216)
Q Consensus 32 ~A~e~AL~da~~--qGls~~eaAk~Aqk~g~kA 62 (216)
.+.-.++.-++. +|+++.+|++.|...++.+
T Consensus 247 Daf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~ 279 (313)
T 3ewm_A 247 DAFMAALLVGILKLKGLDLLKLGKFANLVAALS 279 (313)
T ss_dssp HHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 677888999998 9999999999887665443
No 131
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=20.83 E-value=1.4e+02 Score=24.15 Aligned_cols=50 Identities=16% Similarity=0.102 Sum_probs=38.4
Q ss_pred CChHHHHHHHHHHH-HHHHHHHHHHhhhhhcchhhcchhhh--hh-hhhcCccce
Q 027980 46 LSSNDAAKQAQKEG-AKAAKLAKRQAKRIIGPIIAAGWDFF--EA-IYYGGTITE 96 (216)
Q Consensus 46 ls~~eaAk~Aqk~g-~kAAKlA~rQAkRI~GPiissgWDfF--Ea-lYyGGt~tE 96 (216)
+++++..+.| +.+ +..|+.+-+++=+.+|=.|+.-.-.| |. ++.||.+..
T Consensus 224 ~~~~~i~~~a-~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l~P~~gvvigGGi~~ 277 (332)
T 1sz2_A 224 LKPKDITERA-LADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVP 277 (332)
T ss_dssp CCHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECSSSG
T ss_pred CCHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEEChhhh
Confidence 4566665554 567 89999999999999998888877777 55 788887764
No 132
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=20.19 E-value=22 Score=30.02 Aligned_cols=27 Identities=30% Similarity=0.330 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHH
Q 027980 34 IEKAVVDALSQGLSSNDAAKQAQKEGA 60 (216)
Q Consensus 34 ~e~AL~da~~qGls~~eaAk~Aqk~g~ 60 (216)
++..|...+.+||++++|+|++.+.--
T Consensus 254 ~~~~~~~~~~~~~~~k~a~~~~a~~~g 280 (296)
T 3kwp_A 254 IDVQVDRLIAAGEKPNDAIKEVAKLRG 280 (296)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHhcc
Confidence 345566677789999999998876543
Done!