BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027984
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M122|GEML2_ARATH GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1
Length = 233
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 145/197 (73%), Gaps = 2/197 (1%)
Query: 9 NNPYLRLT-PLPASGNRSWGEICEMLNRCGKRFEDATRKAECLADNVWHHLRISPRLSDA 67
+NPY+ +T P AS RS ++ E+LNRCGK+ EDATRKAE L + HL+ SP +SDA
Sbjct: 28 DNPYVHITSPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDA 87
Query: 68 AMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMA 127
AMA+++QGTK+ EGG E+VFQ+EF LA EKLL ++ CYIST++GPV G +YIS +R+A
Sbjct: 88 AMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIA 147
Query: 128 FCSDYPLSHYSSSGQQE-WVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWF 186
FCSDY + SS+G Y+KVV++ +++ +++ S N PSE+Y+H+VTRDG+EFWF
Sbjct: 148 FCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWF 207
Query: 187 MGFISYDKALKTLTEAL 203
MGF+SY A L +AL
Sbjct: 208 MGFVSYIDAFNCLNKAL 224
>sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1
SV=1
Length = 299
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 10 NPYLRLTPLP---ASGNRSWGEICEMLNRCGKRFEDATRKAECLADNVWHHLRISPRLSD 66
NPY+ +P AS + + +L R GKR +A +K E LA N W HLR +P +D
Sbjct: 96 NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155
Query: 67 AAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRM 126
AAM +IAQ TKVF EGGYEK+F+Q F E+LL ++ACY+STS GPV+G LYIS+ ++
Sbjct: 156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215
Query: 127 AFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWF 186
A+CSD PLS Y + Q EW Y+KVV+ L QL+ VNPSA+ NP+EKYI V++ D +EFWF
Sbjct: 216 AYCSDNPLS-YKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWF 274
Query: 187 MGFISYDKALKTLTEALR 204
MGF++YD A+ +L ++L+
Sbjct: 275 MGFLNYDGAVTSLQDSLQ 292
>sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1
Length = 259
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 139/196 (70%), Gaps = 4/196 (2%)
Query: 9 NNPYLRLTPLPASGNRSWGEICEMLNRCGKRFEDATRKAECLADNVWHHLRISPRLSDAA 68
+NPY+ +P P + + + L + GK DAT+KAE LA N W HL+ P ++DAA
Sbjct: 64 SNPYVSPSPAP---RNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAA 120
Query: 69 MAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAF 128
+++IAQGTK+ EGGYEKVF+Q F L EKLLK YACY+STS GPV+G +Y+ST ++AF
Sbjct: 121 VSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAF 180
Query: 129 CSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMG 188
SD PLS Y Q W Y+KVV+ +QL+ VNPS +R N S+KYI V++ D +EFWFMG
Sbjct: 181 SSDNPLS-YKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239
Query: 189 FISYDKALKTLTEALR 204
F++Y+ A+K+L EA++
Sbjct: 240 FVTYESAVKSLQEAVQ 255
>sp|Q9LYV6|GEML5_ARATH GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1
Length = 272
Score = 170 bits (430), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 111/174 (63%)
Query: 40 FEDATRKAECLADNVWHHLRISPRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEK 99
F +RKAE +A N+WH+L+ P +S+ A K+ K T+GG+E +F+Q F E
Sbjct: 97 FHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNET 156
Query: 100 LLKAYACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRT 159
L K +ACY+ST+ GPV GT+Y+S R+AFCSD PL + SGQ+ W Y++VVV L + T
Sbjct: 157 LKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVAT 216
Query: 160 VNPSANRWNPSEKYIHVVTRDGYEFWFMGFISYDKALKTLTEALRRFPDTSGGL 213
VNP + P EKYI + T DG++FWFMGF++Y+KA L ++ F G +
Sbjct: 217 VNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQTAHGSV 270
>sp|Q9M063|GEML3_ARATH Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100
PE=3 SV=2
Length = 239
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 123/200 (61%), Gaps = 28/200 (14%)
Query: 10 NPYLRLTPLPASGNRSWGEICE----MLNRCGKRFEDATRKAECLADNVWHH-LRISPRL 64
NPY+ P S + S E E +L R G+R +A KAE LA N W H LR
Sbjct: 55 NPYVARAPTETS-DASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR----- 108
Query: 65 SDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQ 124
AAM +IAQ TKV EGGYEK+F+Q F + E+L ++ACY+STS GPV+G LY+ST
Sbjct: 109 --AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTA 166
Query: 125 RMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEF 184
++A+CSD L VV+ L QL++VNPS + NP+EKYI V++ D +EF
Sbjct: 167 KLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEF 211
Query: 185 WFMGFISYDKALKTLTEALR 204
WFMGF++Y+ A+ +L + L+
Sbjct: 212 WFMGFLNYEGAVTSLQDTLQ 231
>sp|Q9FTA0|GEML4_ARATH GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1
Length = 222
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 18 LPASGNRS-WGEICEMLNRCGKRFEDATRKAECLADNVWHHLRISPRLSDAAMAKIAQGT 76
+PAS +S + +L R +K + + V +I P+L++ K++ G
Sbjct: 35 VPASSKKSEQSNVKSILKR---------KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGA 85
Query: 77 KVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCSDYPLSH 136
++ GG EK+F++ F GEKL K Y CY+ST+ GP+ G L+IS+++MAFCS+ +
Sbjct: 86 RILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKV 145
Query: 137 YSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFISYDKAL 196
S G V++KV + L ++ VN S N PS+KY+ VVT DG++FWFMGF+SY KA
Sbjct: 146 DSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAF 205
Query: 197 KTLTEAL 203
L +AL
Sbjct: 206 NCLEKAL 212
>sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370
PE=3 SV=1
Length = 219
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 101/159 (63%)
Query: 45 RKAECLADNVWHHLRISPRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAY 104
+K + + V ++ P+L++ K++ G ++ GG EK++++ F EKL KAY
Sbjct: 55 KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114
Query: 105 ACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSA 164
CY+ST+ GP+ G L+IS++++AFCS+ + S G+ V++KV + L ++ VN S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174
Query: 165 NRWNPSEKYIHVVTRDGYEFWFMGFISYDKALKTLTEAL 203
N PS+KY+ VVT DG++FWFMGF+SY KA L +AL
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQAL 213
>sp|Q9FMW6|GEML6_ARATH GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2
Length = 218
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 98/159 (61%)
Query: 45 RKAECLADNVWHHLRISPRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAY 104
+K + + ++ P+L++ K++ G K+ GG EK++++ F EKL KAY
Sbjct: 55 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 114
Query: 105 ACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSA 164
CY+ST+ GP+ G L+IS++++AFCS+ + S G V++KV + L ++ VN S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 174
Query: 165 NRWNPSEKYIHVVTRDGYEFWFMGFISYDKALKTLTEAL 203
N PS+KY+ +VT D ++FWFMGF+SY KA L +AL
Sbjct: 175 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKAL 213
>sp|Q9FMW5|GEML7_ARATH GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1
Length = 210
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 97/159 (61%)
Query: 45 RKAECLADNVWHHLRISPRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAY 104
+K + + ++ P+L++ K++ G K+ GG EK++++ F EKL KAY
Sbjct: 47 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106
Query: 105 ACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSA 164
CY+ST+ G + G L+IS++++AFCS+ + S G V++KV + L ++ VN S
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166
Query: 165 NRWNPSEKYIHVVTRDGYEFWFMGFISYDKALKTLTEAL 203
N PS++Y+ VVT D Y+FWFMGF+SY KA L +AL
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKAL 205
>sp|O31512|YESF_BACSU Uncharacterized oxidoreductase YesF OS=Bacillus subtilis (strain
168) GN=yesF PE=3 SV=1
Length = 286
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 11/119 (9%)
Query: 8 NNNPYLRLTPLPASGNRSWGEICEMLNRCGKRFEDATRKAECLADNVWHHLR------IS 61
NP L G+R I L + G R A+RK LAD + + +
Sbjct: 3 KQNPILITGGTGTVGSR----IASRLIKLGYRVRIASRKKGALADAEYVYFNWKYASSFT 58
Query: 62 PRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLY 120
P L + VF Y F +E +L ++++ A +S NGPV G L+
Sbjct: 59 PALEQVKQIYLVAPVGVFDPAPYVLPFLKEAKRLGAKRVVMQSASVVS-ENGPVFGALH 116
>sp|Q6C8M8|ATG26_YARLI Sterol 3-beta-glucosyltransferase OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ATG26 PE=3 SV=3
Length = 1456
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 31 EMLNRCGKRFEDATRKAECLADNVWHHLRI-SPRLSDAAMAKIAQGTKVFTEGGYEKVFQ 89
+ + KRF ++ ++ + + H+ + + RL D +A ++ TE + FQ
Sbjct: 774 DTFKKKNKRFSTLSKVSDLWSGSTKHYGKHHTERLGDDDDKHLASAEEI-TESN--ERFQ 830
Query: 90 QEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 130
+ F E+L+ +Y C++ P G +Y+ST + F S
Sbjct: 831 KRFALGTEERLIASYHCHLHRGGIPTYGKMYVSTNYVTFRS 871
>sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis
thaliana GN=At5g50170 PE=2 SV=1
Length = 1027
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 92 FHKLAG----EKLLKAYACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVY 147
F KL G E LLK Y CY+ PV G L++S + +AF S+ G + Y
Sbjct: 694 FQKLFGLPHEEFLLKEYTCYLK-RKLPVQGKLFLSARIVAFYSNV-------FGHKTKFY 745
Query: 148 FKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYE---------------FWFMGFISY 192
F + D+D ++ + P+ I + G + F+F F+S+
Sbjct: 746 F-LWEDIDDIQVLPPTFASLGSPLLLIILKKNRGLDAKHGAKSQDDEGRLSFYFQSFVSF 804
Query: 193 DKALKTL 199
D +T+
Sbjct: 805 DATSRTI 811
>sp|Q28PV9|ARGC_JANSC N-acetyl-gamma-glutamyl-phosphate reductase OS=Jannaschia sp.
(strain CCS1) GN=argC PE=3 SV=1
Length = 342
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 70 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRM 126
A++++GT + GG + F QEF K+AG K+ + +++ N ++ T Y+
Sbjct: 194 AELSEGTHAYALGGTHRHLGEFDQEFSKVAGRKVEVQFTPHLAPFNRGILATCYVKGDAQ 253
Query: 127 AF 128
A
Sbjct: 254 AI 255
>sp|A3PK36|ARGC_RHOS1 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argC PE=3
SV=1
Length = 342
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 70 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 121
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|Q9IAY2|VM1H5_DEIAC Snake venom metalloproteinase H5 (Fragment) OS=Deinagkistrodon
acutus PE=1 SV=1
Length = 404
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 74 QGTKVFTEGG----YEKVFQQEFHKLAGEKLLKAYA---CYISTSNGPVIGTLYISTQRM 126
QG+ + E G YE V+ Q L + + Y Y NG IG L++ +
Sbjct: 4 QGSSIMLESGKVNDYEVVYPQRLAPLPEGAVQQKYEDTMQYEFKVNGETIG-LHMEKSKG 62
Query: 127 AFCSDYPLSHYSSSGQQEWVYFKV 150
F DY +HYS G++ Y V
Sbjct: 63 LFSKDYSETHYSPDGRKITTYPSV 86
>sp|B9KSY0|ARGC_RHOSK N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain KD131 / KCTC 12085) GN=argC PE=3
SV=1
Length = 342
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 70 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 121
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|Q3J277|ARGC_RHOS4 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=argC PE=3 SV=1
Length = 342
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 70 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 121
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|O58415|PORD_PYRHO Pyruvate synthase subunit PorD OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=porD PE=3 SV=3
Length = 105
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 51 ADNVWHHLRISPRLSDAAMAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYI 108
AD ++ +++ A+A I G+ V + G +VF+ EFHK +K ++ + CYI
Sbjct: 8 ADIERAQKELTEKMTPGAIAYIP-GSSVINKTGSWRVFKPEFHK---DKCVRCFLCYI 61
>sp|Q55D51|FNTB_DICDI Protein farnesyltransferase subunit beta OS=Dictyostelium
discoideum GN=fntB PE=3 SV=1
Length = 500
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 109 STSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWN 168
ST NG +I I M P+SH + W+ F ++ +D L +++ N +
Sbjct: 49 STENGNIIEKKKILNFLMNGIEKIPMSHQGLDSSKVWISFWILNGMDMLDSLDSYPNISS 108
Query: 169 PSEKYIHVV 177
+ KY+ ++
Sbjct: 109 RASKYLSIL 117
>sp|Q9ZUA9|Y2181_ARATH PHD finger protein At2g01810 OS=Arabidopsis thaliana GN=At2g01810
PE=3 SV=1
Length = 697
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 35 RCGKRFEDATRKAECLADNVWHHLRISPRLSDAAMAKI 72
+CG R +D R C A VWHH + D A+ +
Sbjct: 639 KCGARDDDGERMVACDACKVWHHTLCNSIEDDEAVPSV 676
>sp|A4WQY7|ARGC_RHOS5 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=argC PE=3
SV=1
Length = 342
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 70 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 121
A++++GT ++ GG + F QEF K+AG + + +++ N ++ ++++
Sbjct: 194 AELSEGTHAYSAGGTHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILASVHV 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,902,509
Number of Sequences: 539616
Number of extensions: 3300382
Number of successful extensions: 7193
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7175
Number of HSP's gapped (non-prelim): 31
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)