BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027985
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/206 (87%), Positives = 194/206 (94%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW+RNI+QHA+DNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
DMDESKRAVPTAKGQ LADEYGIKFFETSAKTN NVE+VFFSI R+IKQRL ++DS+AEP
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEP 190
Query: 191 QTIRISKPDPANGSAAAPEKSACCGS 216
TI+IS+ D A G+ A +KSACCG+
Sbjct: 191 ATIKISQTDQAAGAGQATQKSACCGT 216
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 195/206 (94%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW+RNI+QHA+D+VNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
DMDESKRAVP +KGQ LADEYG+KFFETSAKTN NVE+VFFSIA++IKQRL ++D++AEP
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEP 190
Query: 191 QTIRISKPDPANGSAAAPEKSACCGS 216
QTI+I++ D G++ A +KSACCG+
Sbjct: 191 QTIKINQSDQGAGTSQATQKSACCGT 216
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/214 (87%), Positives = 201/214 (93%), Gaps = 1/214 (0%)
Query: 1 MATAPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
MA APARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDD+FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWM+NI+QHA+DN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQR 180
VNKILVGNKADMDESKRAVPTAKGQ LADEYGIKFFETSAKTN NVE VF SIA++IKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180
Query: 181 LVESDSKAEPQTIRISKPDPANGSAAAPEKSACC 214
L E+D+KAEPQ I+I+K D A S+ A EKSACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSSTA-EKSACC 213
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/215 (86%), Positives = 202/215 (93%), Gaps = 1/215 (0%)
Query: 1 MATAPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
MA APARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDD+FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWM+NI+QHA+D+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQR 180
VNKILVGNKADMDESKRAVPT+KGQ LADEYGIKFFETSAKTN NVEQVF SIA++IKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
Query: 181 LVESDSKAEPQTIRISKPDPANGSAAAP-EKSACC 214
L ESD+KAEPQ I+I+K D S+++ EKSACC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/206 (86%), Positives = 189/206 (91%), Gaps = 1/206 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYLIKLLLIGDSGVGKSCLLLRFSD SFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW+RNI+QHA+DNVNKILVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
DMDESKRAVPTAKGQ LADEYGIKFFETSAKTN NVE+VFFSIAR+IKQRL +SD++ E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 191 QTIRISKPDPANGSAAAPEKSACCGS 216
Q KP +G+ AA KSACCGS
Sbjct: 191 QPSITIKPADQSGNQAAA-KSACCGS 215
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 300 bits (769), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 179/213 (84%), Gaps = 7/213 (3%)
Query: 3 TAPARAR-ADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDG 61
T+PA + A YDYLIKLLLIGDSGVGKSCLLLRFS+DSFT SFITTIGIDFKIRTIEL+G
Sbjct: 2 TSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEG 61
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNV 121
KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNW+RNI+QHA D+V
Sbjct: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSV 121
Query: 122 NKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
NK+L+GNK DM E K+ V +++G+ LADEYGIKF ETSAK + NVE+ F S+A++IK+R+
Sbjct: 122 NKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRM 180
Query: 182 VESDSKAEPQTIRISKPDPANGSAAAPEKSACC 214
+++ ++ +PQ ++ AN + +K ACC
Sbjct: 181 IDTPNE-QPQVVQPGTNLGANNN----KKKACC 208
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 286 bits (731), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 175/213 (82%), Gaps = 12/213 (5%)
Query: 3 TAPARAR-ADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDG 61
T+PA + A YD+L+KLLLIGDSGVGKSCLLLRFSD SFT SFI TIGIDFKIRTIEL+G
Sbjct: 2 TSPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEG 61
Query: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNV 121
KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNW+RNI+QHA+D+V
Sbjct: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSV 121
Query: 122 NKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
NK+L+GNK DM E K+ V +++G+ LADEYGIKF ETSAK + NVE+ F +A++IK+R+
Sbjct: 122 NKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRM 180
Query: 182 VESDSKAEPQTIRISKPDPANGSAAAPEKSACC 214
+++ + + TI I+ P N +K+ CC
Sbjct: 181 IDTPNDPD-HTICIT---PNN------KKNTCC 203
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 285 bits (729), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 169/225 (75%), Gaps = 20/225 (8%)
Query: 1 MATAPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
MA P R DYD LIKLLL+GDSGVGKSCLLLRF+DD FT+SFITTIGIDFKI+ +++D
Sbjct: 1 MARIPGRP--DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVD 58
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADN 120
GK +KLQIWDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNWMRNI+QHA+DN
Sbjct: 59 GKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDN 118
Query: 121 VNKILVGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQR 180
VNKILVGNK D+ E KR V A+GQ LADE+G +F+ETSAK N +VE+ F ++A+++ R
Sbjct: 119 VNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLAR 178
Query: 181 L-----------VESDSKAEPQTIRISKPDPANGSAAAPEKSACC 214
+ + S A+P + P PA G +CC
Sbjct: 179 MEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQG-------KSCC 216
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 276 bits (707), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYLIKLLLIGDSGVGKSCLLLRFS+DSFT SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N++QHA++NV KIL+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEPQ 191
E +R V +GQ LADE G+KF E SAKTN NV++ FF++AREIK++ ++++++ Q
Sbjct: 126 C-EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEPQ 191
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ + PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEPQ 191
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ + PQ
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 263 bits (672), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ +E +S +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKRSS 200
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 263 bits (672), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ +E +S +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKRSS 200
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 263 bits (672), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ +E +S +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKRSS 200
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 263 bits (671), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
+++ KR V +G++LA +YGIKF ETSAK N NVE FF++AR+IK ++ +E +S +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKRSS 200
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
+++ KR V +G++LA +YGIKF ETSAK N NVE F+++AR+IK ++ +E +S +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKRSS 200
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M++ KR V +G++LA +YGIKF ETSAK++ NVE+ FF++AR+I +L
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M++ KR V +G++LA +YGIKF ETSAK++ NVE+ FF++AR+I +L
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M++ KR V +G++LA +YGIKF ETSAK++ NVE+ FF++AR+I +L
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL 173
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M++ KR V +G++LA +YGIKF ETSAK++ NVE+ FF++AR+I +L
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M++ KR V +G++LA +YGIKF E SAK++ NVE+ FF++AR+I +L
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKL 173
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+D+F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NW+RNI++HA+ +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
M+E KR V +G++LA +YGIKF ETSAK++ NVE+ F ++AR+I +L
Sbjct: 125 MNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 160/198 (80%), Gaps = 6/198 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNI++HA+ +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL---VESDS-K 187
++ KR V +G++LA +GIKF ETSAK N N+E FF++AR+IK ++ +E +S +
Sbjct: 125 AND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 AEPQTIRISKPDPANGSA 205
Q ++I+ PD S+
Sbjct: 184 GSNQGVKIT-PDQQKKSS 200
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 159/208 (76%), Gaps = 10/208 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSDDS+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ ID++A+DNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE--SDSKA 188
D+ E+ RA+P + ADE GI F ETSAK NVEQ F +++ IK+R+ + + A
Sbjct: 124 DLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 189 EPQTIRISKPDPANGSAAAPEKSACCGS 216
P T++I G A +K+ CC +
Sbjct: 183 RPPTVQI------RGQPVA-QKNGCCST 203
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 162/206 (78%), Gaps = 9/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL--VESDSKA 188
D+ +K+ V +E AD+ GI F ETSAK NVEQ F ++A EIK R+ + + S +
Sbjct: 127 DL-TTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDS 185
Query: 189 EPQTIRISKPDPANGSAAAPEKSACC 214
+P +++I+ P + + K CC
Sbjct: 186 KP-SVKINSSTPVSAN-----KGGCC 205
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 257 bits (657), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DMD+ KR VP KG+++A E+GI+FFETSAK N N+E+ F ++A +I ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DMD+ KR VP KG+++A E+GI+FFETSAK N N+E+ F ++A +I ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DMD+ KR VP KG+++A E+GI+FFETSAK N N+E+ F ++A +I ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DMD+ KR VP KG+++A E+GI+FFETSAK N N+E+ F ++A +I ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 256 bits (655), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 156/207 (75%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGID KI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DM E KR VP AKG+++A E+GI+FFETSAK N N+E+ F ++A +I ++ +
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 156/206 (75%), Gaps = 8/206 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
D+ SK+ V + + ADE GI F ETSAK NVEQ F ++A EIK R+ ++P
Sbjct: 124 DL-TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA-----SQP 177
Query: 191 QTIRISKP--DPANGSAAAPEKSACC 214
+ P P G + S+CC
Sbjct: 178 IPTKAGGPVVRPQEGKPINSKSSSCC 203
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 158/208 (75%), Gaps = 10/208 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DDS+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ ID++A+DNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE--SDSKA 188
D+ +K V T + ADE GI F ETSAK NV+Q F ++A IK R+ + + A
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIRISKPDPANGSAAAPEKSACCGS 216
P T++I + P N +K++CC S
Sbjct: 183 RPATVQI-RGQPVN------QKTSCCSS 203
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ ++ YD LIKLLLIGDSGVGKSCLLLRF +D FT SFITTIGIDFKIRTI++ +R+K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKIL 125
LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N+ +A + V IL
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELIL 121
Query: 126 VGNKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIK 178
VGNK D+DE KR V T +GQ LAD++GI F E S+KTN NVE+ F+S+A I+
Sbjct: 122 VGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIR 173
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 159/206 (77%), Gaps = 10/206 (4%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DDS+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ ID++A++NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE--SDSKA 188
D+ E+ R V G+ LADE GI F ETSAK NVE+ F ++A EIK R+ + + +
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNAS 182
Query: 189 EPQTIRISKPDPANGSAAAPEKSACC 214
+P T+++ G A ++S+CC
Sbjct: 183 KPATVQM------RGQPVA-QQSSCC 201
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 152/204 (74%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
D+ K+ V + ADE GI F ETSAK NVEQ F ++A EIK R+ S+ P
Sbjct: 124 DL-TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA---SQPVP 179
Query: 191 QTIRISKPDPANGSAAAPEKSACC 214
P G + S+CC
Sbjct: 180 PKPGGPVVRPTEGKPINNKSSSCC 203
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 250 bits (638), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 158/207 (76%), Gaps = 12/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ ID++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
D+ +KR V T +E A+ GI+F ETSAK NVE+ F +A +IK+R+ +++ P
Sbjct: 124 DL-TAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRM--ANAPVAP 180
Query: 191 QT---IRISKPDPANGSAAAPEKSACC 214
+ + + P+NG S CC
Sbjct: 181 KAGVKLTPGQQVPSNGG------SKCC 201
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK--A 188
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIRI-SKPDPANGSAAAPEKSACC 214
E ++I S P +G CC
Sbjct: 186 EKSNVKIQSTPVKQSG-------GGCC 205
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK--A 188
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIRI-SKPDPANGSAAAPEKSACC 214
E ++I S P +G CC
Sbjct: 186 EKSNVKIQSTPVKQSG-------GGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK--A 188
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIRI-SKPDPANGSAAAPEKSACC 214
E ++I S P +G CC
Sbjct: 186 EKSNVKIQSTPVKQSG-------GGCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK--A 188
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIRI-SKPDPANGSAAAPEKSACC 214
E ++I S P +G CC
Sbjct: 186 EKSNVKIQSTPVKQSG-------GGCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 11/207 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK--A 188
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + A
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 185
Query: 189 EPQTIRI-SKPDPANGSAAAPEKSACC 214
E ++I S P +G CC
Sbjct: 186 EKSNVKIQSTPVKQSG-------GGCC 205
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 249 bits (637), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ ID++A++NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRL 181
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 151/204 (74%), Gaps = 4/204 (1%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ ID++A + VNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
DM + K+ V +E AD GI F ETSAK NVEQ F ++AR+IK+R+ S A
Sbjct: 124 DMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERM--GSSIATN 180
Query: 191 QTIRISKPDPANGSAAAPEKSACC 214
T P +G + CC
Sbjct: 181 NTKASVNVSPGHG-VSNNSSGGCC 203
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 144/173 (83%), Gaps = 1/173 (0%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNID+HA ++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQR 180
NK DM E KR V +KG+++A E+ I+FFETSAK N N+E+ F ++A +I Q+
Sbjct: 122 NKCDM-EDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQK 173
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE-SDSKAE 189
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIRISKPDPANGSAAAPEKSACC 214
++I + + P CC
Sbjct: 183 RPNLKI------DSTPVKPAGGGCC 201
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE-SDSKAE 189
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIRISKPDPANGSAAAPEKSACC 214
++I + + P CC
Sbjct: 183 RPNLKI------DSTPVKPAGGGCC 201
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE-SDSKAE 189
D+ +K+ V +E AD G+ F ETSAK NVEQ F ++A EIK+R+ + S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIRISKPDPANGSAAAPEKSACC 214
++I + + P CC
Sbjct: 183 RPNLKI------DSTPVKPASGGCC 201
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 247 bits (630), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DY YL KLLLIGDSGVGKSCLLLRF+DD+++ SFI+TIG+DFKIRTIEL+GK IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ ID+ A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSKAEP 190
D+ +K+ V + AD I F ETSAK + NVEQ F ++A EIK RL S
Sbjct: 124 DL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPT--- 179
Query: 191 QTIRISKPDPANGSAAAPEKSACC 214
QT+ +K P + + +P KS CC
Sbjct: 180 QTVDKNKVVPGSSAPISP-KSGCC 202
>sp|P35281|RAB10_RAT Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=1 SV=1
Length = 200
Score = 247 bits (630), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 152/207 (73%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TI IDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNIDQHA ++V ++L+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLR 121
Query: 128 NKADMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVESDSK 187
NK DMD KR VP KG+++A E+ I+FFETSAK N N+E+ F ++ +I ++ +
Sbjct: 122 NKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPN 180
Query: 188 AEPQTIRISKPDPANGSAAAPEKSACC 214
+E D ++G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 246 bits (629), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 154/205 (75%), Gaps = 8/205 (3%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+DD++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIDQHAADNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD S+ N++ W++ ID++A++NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTAKGQELADEYGIKFFETSAKTNFNVEQVFFSIAREIKQRLVE-SDSKAE 189
D+ +K+ V +E AD GI F ETSAK NVEQ F ++A EIK+R+ + S E
Sbjct: 124 DL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
Query: 190 PQTIRISKPDPANGSAAAPEKSACC 214
++I + + P CC
Sbjct: 183 RPNLKI------DSTPVKPAGGGCC 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,498,781
Number of Sequences: 539616
Number of extensions: 2853714
Number of successful extensions: 14077
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 584
Number of HSP's that attempted gapping in prelim test: 11630
Number of HSP's gapped (non-prelim): 1630
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)