Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>027989
MLSRKLKQLCFPGRAFSYGLNWALAGRGVVVNDKAFQNLTTSELQQKGATIAESLSGLPV
YVRGNLLGGSSDISKAQYAKLLKQVTAHLSSIANVFVQDGAVGSSSECDAKVRVISDSPS
AVLKLSSILWKTPSRAVSHDSCPLTVYVTTSISPGVVNAVGLRAQGDNGFIAADIERSSL
ILCGKGFSDANGVKEALAALSGPVIIARGGLLLCAR

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027989
        (216 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

DICTYBASE|DDB_G0290857 - symbol:DDB_G0290857 species:4468...   111  9.0e-05   2


>DICTYBASE|DDB_G0290857 [details] [associations]
            symbol:DDB_G0290857 species:44689 "Dictyostelium
            discoideum" [GO:0017076 "purine nucleotide binding" evidence=IEA]
            [GO:0006094 "gluconeogenesis" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004612 "phosphoenolpyruvate
            carboxykinase (ATP) activity" evidence=IEA] [GO:0004611
            "phosphoenolpyruvate carboxykinase activity" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001272
            InterPro:IPR008210 InterPro:IPR013035 Pfam:PF01293
            dictyBase:DDB_G0290857 GO:GO:0005524 GO:GO:0006094
            EMBL:AAFI02000171 GO:GO:0004612 Gene3D:3.40.449.10
            Gene3D:3.90.228.20 SUPFAM:SSF68923 RefSeq:XP_635497.1
            EnsemblProtists:DDB0189117 GeneID:8627864 KEGG:ddi:DDB_G0290857
            eggNOG:NOG267313 InParanoid:Q54FH4 OMA:PIISARG
            ProtClustDB:CLSZ2728773 Uniprot:Q54FH4
        Length = 519

 Score = 111 (44.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
 Identities = 39/177 (22%), Positives = 77/177 (43%)

Query:    31 VNDKAFQNLTTSELQQKGATIAESLSGLPVYVRGNLLGGSSDISKAQYAKLLKQVTAHLS 90
             V DK    L TS   Q+   +        +  + N    S  IS A Y  +L++V  ++S
Sbjct:   106 VTDKN-NVLITSSSSQEPKNVVNFFLDETISSKNNK-DSSKVISIADYKLVLEKVKQNIS 163

Query:    91 SIANVFVQDGAVGSSSECDAKVRVISDSPSAVLKLSSILWKTPSRAVSHDSCPLTVYVTT 150
                N++V D AVGS  + ++K+R +++   + L +  +L  T    V+     LTVY   
Sbjct:   164 ESTNIYVHDSAVGSCRDVESKIRFVTNDAVSSLFVKHLLPTTTPTQVNEFKHQLTVYCVP 223

Query:   151 SIS-PGVVNAVGLRAQGDNGFIAADIERSSLILCGKGFSDANGVKEALAALSGPVII 206
                 P   +++       + F   D +R   ++ G        ++  ++++S  +++
Sbjct:   224 EFKFPSSSSSLP-----SSSFNIIDTKRGIAVIVG--IQSTENIRNVISSISSNILM 273

 Score = 47 (21.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query:    14 RAFSYGLNWALAGRGVVVNDKAFQN 38
             +   Y LNW L G  +  +  A++N
Sbjct:    69 QGLDYDLNWTLNGYSITPSYSAYRN 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       216   0.00088  112 3  11 22  0.39    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  154 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.89u 0.13s 18.02t   Elapsed:  00:00:01
  Total cpu time:  17.89u 0.13s 18.02t   Elapsed:  00:00:01
  Start:  Thu May  9 21:18:19 2013   End:  Thu May  9 21:18:20 2013

Back to top